Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0004084

Physical Location & Seq

Genomic Coordinates Reverse (-)

9425442 .. 9429876

Gene Structure 4435 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0120400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1380 bp

ATGAGTGCTCCGAGTCCAATGGAGATCTACGTGCAAAACCCCCAACACGCCGATATCCCAGACCAAAACGGCGCCGTCCAAGTCGTCGCTTCAACTCCTTCTCCTATCATTCCCCAGGACAAAGTCCTCGTTTCAGTTGAGGTTTGCCTCAAGCCGTCGAGCACTGCTCGGATTGACGATGTGCGGTCAGCTGTTGAGAGAATGCTTGAGAAGAGGAGTTTGAGCTATACTGATGGACCTGTGCCGGTGCCGTCTGATGATCTGTTCCTGACTCAAAATGTGGAAAGAATCTGTATTTGTGACACCGATGAGTGGGTGCAGAATCATGACATCCTTTTGTTCTGGCAAGCGAGACCTGTTGTGCATGTGTTTCAGCTTAGCGAAGAGGGAGCATGTGAGGATGTAAGTGGGGAAGGACAATCTTCTACCTTCAATGAATGGATTCTTCCAGCAAAGGAATTCGATGGCATGTGGGAAAGCTTAATATATGAATCTGGGCTGAAGCAAAGGTTGCTTCGGTACGCGGCTAGTGCATTACATTTTACTGAAAAGGGTGTTAATCCTTTCCTTGTGTCATGGAATCGCATTGTTCTTTTACATGGGCCTCCAGGGACTGGAAAAACCTCTTTATGTAAAGCATTGGCTCAGAAGCTATCCATCCGATTTAACTCCAGATACCCGCAGTCCCAATTGATTGAAGTTAATGCACATTCTCTATTCAGCAAATGGTTCTCTGAAAGTGGCAAGTTGGTTGCAAAGCTTTTCCAAAAAATTCAAGAGATGGTAGAGGAGGAAACCAATCTGGTATTTGTTTTGATTGATGAAGTTGAAAGCCTTGCTGCTGCGAGAAAATCCGCTTTATCTGGTTCTGAACCTTCAGATTCTATTCGGGTGGTGAATGCGCTACTAACTCAGCTGGACAAACTGAAATCAGCACCAAATGTGATAATTTTAACAACATCCAACATAACTGCTGCTATTGATATCGCATTTGTCGATCGAGCTGATATAAAAGCATATGTTGGTCCCCCAACTCTGCAAGCGCGTTATGAAATCCTAAGGTCCTGCTTGCTGGAACTCATACGAACAGGAATTTTATCAAATTTTGAGGGTTGTGAAAGCCTCATGCTTCCTAACTATGCTAGCTTGAAAGAGAGATTGAATATGCCTCAGATTCATGATGCCCAGACACCACTACACTTGTGTAGGCAGTTGCATGAAACTGCAGAAGCGTGTGAGGGATTAAGTGGACGATCTCTAAGAAAGCTTCCATTCTTAGCGCATGCGGCTCTTTCAAATCCTTACAGTTGTGACCCTAGCAAGTTCTTGTGCGCAATGACAGATACAGCAAGGAGGGAGCGTTCTGAGCTACCTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000166 GO:0000825 GO:0003006 GO:0003674 GO:0003824 GO:0005488 GO:0005524 GO:0006066 GO:0006793 GO:0006796 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009791 GO:0009987 GO:0010154 GO:0010264 GO:0016301 GO:0016310 GO:0016311 GO:0016740 GO:0016772 GO:0016773 GO:0016787 GO:0016788 GO:0016791 GO:0017076 GO:0017144 GO:0019637 GO:0019751 GO:0022414 GO:0030554 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032958 GO:0033517 GO:0035639 GO:0036094 GO:0042578 GO:0043167 GO:0043168 GO:0043647 GO:0044237 GO:0044281 GO:0044283 GO:0046165 GO:0046173 GO:0047325 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051717 GO:0051765 GO:0051766 GO:0052725 GO:0052726 GO:0052743 GO:0052745 GO:0061458 GO:0071704 GO:0090407 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Ins134_P3_kin

Protein Analysis

459

Amino Acids

51.03

Weight (kDa)

5.36

Isoelectric Point (pI)

47.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TRIP13_N	PF23563	40 - 129	6.7e-30	TRIP13 N-terminal domain
AAA_16	PF13191	195 - 316	2e-07	AAA ATPase domain
AAA_22	PF13401	195 - 288	4.1e-07	AAA domain
AAA	PF00004	197 - 342	2.6e-27	ATPase family associated with various cellular activities (AAA)
AAA_lid_TRIP13_C	PF23242	345 - 453	7.5e-42	TRIP13-like, AAA+ ATPase lid C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004084)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16760
fragaria_vesca	FvH4_5g22490 FvH4_7g34131
malus_domestica	MD01G1237400.v1.1 MD03G1144600.v1.1 MD06G1037200.v1.1 MD07G1309900.v1.1 MD16G1271300.v1.1
prunus_persica	Prupe.2G327800_v2.0.a1 Prupe.5G031800_v2.0.a1
pyrus_communis	pycom06g03060 pycom07g28190 pycom16g24080
rosa_chinensis	RchiOBHm_Chr1g0384451 RchiOBHm_Chr7g0210271
rosa_laevigata	RLG00000003053 RLG00000026039
rosa_multiflora	Rmu_co8221066.1_g000001 Rmu_sc0017046.1_g000001
rosa_roxburghii	Rroxscaffold_3G00248470 Rroxscaffold_4G00276690
rosa_rugosa	Rorug01G0447800 Rorug07G0120400
rosa_samantha	Rh1AG473100 Rh1BG431100 Rh1CG444200 Rh1DG463600 Rh7AG253200 Rh7BG248200 Rh7CG270100 Rh7DG260700
rosa_wichuraiana	Rw1G039950 Rw7G021580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1333
AccB1I	GGYRCC	2 cut(s)	71, 247
AccB7I	CCANNNNNTGG	1 cut(s)	614
AccII	CGCG	2 cut(s)	524, 1045
AciI	CCGC	5 cut(s)	184, 524, 680, 855, 1286
AcsI	RAATTY	4 cut(s)	458, 771, 1092, 1102
AcuI	CTGAAG	2 cut(s)	521, 861
AcyI	GRCGYC	1 cut(s)	72
AfaI	GTAC	1 cut(s)	521
AfiI	CCNNNNNNNGG	2 cut(s)	312, 614
AgsI	TTSAA	8 cut(s)	93, 433, 698, 776, 830, 1150, 1162, 1296
AjnI	CCWGG	2 cut(s)	114, 607
AloI	GAACNNNNNNTCC	2 cut(s)	1345, 1377
Alw21I	GWGCWC	2 cut(s)	10, 164
Alw26I	GTCTC	1 cut(s)	346
AlwNI	CAGNNNCTG	1 cut(s)	614
AoxI	GGCC	1 cut(s)	602
ApeKI	GCWGC	3 cut(s)	839, 842, 974
ApoI	RAATTY	4 cut(s)	458, 771, 1092, 1102
Asp700I	GAANNNNTTC	1 cut(s)	441
AspLEI	GCGC	5 cut(s)	74, 904, 1045, 1282, 1334
AspS9I	GGNCC	4 cut(s)	236, 602, 1025, 1062
AsuHPI	GGTGA	1 cut(s)	907
AsuNHI	GCTAGC	1 cut(s)	1142
AvaII	GGWCC	3 cut(s)	236, 1025, 1062
AxyI	CCTNAGG	1 cut(s)	1058
BanI	GGYRCC	2 cut(s)	71, 247
Bbv12I	GWGCWC	2 cut(s)	10, 164
BbvI	GCAGC	3 cut(s)	826, 829, 961
BccI	CCATC	4 cut(s)	227, 458, 665, 775
BceAI	ACGGC	4 cut(s)	59, 85, 139, 235
BciT130I	CCWGG	2 cut(s)	116, 609
BcoDI	GTCTC	1 cut(s)	346
BfaI	CTAG	3 cut(s)	528, 1143, 1317
BfmI	CTRYAG	1 cut(s)	1224
BfoI	RGCGCY	1 cut(s)	75
BglII	AGATCT	1 cut(s)	24
BisI	GCNGC	5 cut(s)	525, 840, 843, 975, 1287
BlpI	GCTNAGC	1 cut(s)	377
BlsI	GCNGC	5 cut(s)	526, 841, 844, 976, 1288
Bme1390I	CCNGG	2 cut(s)	116, 609
Bme18I	GGWCC	3 cut(s)	236, 1025, 1062
BmgT120I	GGNCC	4 cut(s)	236, 602, 1025, 1062
BmiI	GGNNCC	3 cut(s)	73, 249, 1027
BmrFI	CCNGG	2 cut(s)	116, 609
BmsI	GCATC	1 cut(s)	1171
BmtI	GCTAGC	1 cut(s)	1146
BplI	GAGNNNNNCTC	2 cut(s)	151, 183
BpmI	CTGGAG	2 cut(s)	591, 655
Bpu1102I	GCTNAGC	1 cut(s)	377
BpuEI	CTTGAG	2 cut(s)	134, 227
BsaAI	YACGTR	1 cut(s)	31
BsaHI	GRCGYC	1 cut(s)	72
BsaI	GGTCTC	1 cut(s)	346
BsaJI	CCNNGG	2 cut(s)	114, 608
BsaXI	ACNNNNNCTCC	4 cut(s)	85, 115, 1345, 1375
Bsc4I	CCNNNNNNNGG	2 cut(s)	312, 614
Bse118I	RCCGGY	1 cut(s)	244
Bse1I	ACTGG	1 cut(s)	619
Bse21I	CCTNAGG	1 cut(s)	1058
Bse3DI	GCAATG	1 cut(s)	1341
BseBI	CCWGG	2 cut(s)	116, 609
BseDI	CCNNGG	2 cut(s)	114, 608
BseGI	GGATG	4 cut(s)	330, 406, 657, 959
BseLI	CCNNNNNNNGG	2 cut(s)	312, 614
BseMI	GCAATG	1 cut(s)	1341
BseMII	CTCAG	4 cut(s)	659, 926, 1184, 1356
BseNI	ACTGG	1 cut(s)	619
BseRI	GAGGAG	2 cut(s)	229, 803
BseXI	GCAGC	3 cut(s)	826, 829, 961
BsgI	GTGCAG	1 cut(s)	338
Bsh1236I	CGCG	2 cut(s)	524, 1045
Bsh1285I	CGRYCG	1 cut(s)	1000
BshFI	GGCC	1 cut(s)	604
BshNI	GGYRCC	2 cut(s)	71, 247
BsiEI	CGRYCG	1 cut(s)	1000
BsiHKAI	GWGCWC	2 cut(s)	10, 164
BsiSI	CCGG	1 cut(s)	245
BslFI	GGGAC	3 cut(s)	625, 670, 1011
BslI	CCNNNNNNNGG	2 cut(s)	312, 614
BsmAI	GTCTC	1 cut(s)	346
BsmFI	GGGAC	3 cut(s)	625, 670, 1011
BsmI	GAATGC	2 cut(s)	207, 904
BsnI	GGCC	1 cut(s)	604
Bso31I	GGTCTC	1 cut(s)	346
Bsp1286I	GDGCHC	2 cut(s)	10, 164
Bsp143I	GATC	4 cut(s)	24, 259, 997, 1253
Bsp1720I	GCTNAGC	1 cut(s)	377
BspACI	CCGC	5 cut(s)	184, 524, 680, 855, 1286
BspANI	GGCC	1 cut(s)	604
BspCNI	CTCAG	4 cut(s)	658, 925, 1183, 1357
BspFNI	CGCG	2 cut(s)	524, 1045
BspHI	TCATGA	2 cut(s)	325, 1177
BspLI	GGNNCC	3 cut(s)	73, 249, 1027
BspMAI	CTGCAG	1 cut(s)	1228
BspOI	GCTAGC	1 cut(s)	1146
BspT107I	GGYRCC	2 cut(s)	71, 247
BspTNI	GGTCTC	1 cut(s)	346
BsrDI	GCAATG	1 cut(s)	1341
BsrFI	RCCGGY	1 cut(s)	244
BsrI	ACTGG	1 cut(s)	619
BssAI	RCCGGY	1 cut(s)	244
BssECI	CCNNGG	2 cut(s)	114, 608
BssMI	GATC	4 cut(s)	24, 259, 997, 1253
BssNI	GRCGYC	1 cut(s)	72
Bst2UI	CCWGG	2 cut(s)	116, 609
Bst4CI	ACNGT	1 cut(s)	1307
Bst6I	CTCTTC	2 cut(s)	206, 378
BstACI	GRCGYC	1 cut(s)	72
BstAPI	GCANNNNNTGC	1 cut(s)	511
BstBAI	YACGTR	1 cut(s)	31
BstC8I	GCNNGC	5 cut(s)	348, 1041, 1070, 1144, 1284
BstDEI	CTNAG	8 cut(s)	377, 645, 912, 1058, 1170, 1259, 1276, 1365
BstF5I	GGATG	4 cut(s)	330, 406, 657, 959
BstFNI	CGCG	2 cut(s)	524, 1045
BstH2I	RGCGCY	1 cut(s)	75
BstHHI	GCGC	5 cut(s)	74, 904, 1045, 1282, 1334
BstKTI	GATC	4 cut(s)	27, 262, 1000, 1256
BstMAI	GTCTC	1 cut(s)	346
BstMBI	GATC	4 cut(s)	24, 259, 997, 1253
BstMCI	CGRYCG	1 cut(s)	1000
BstMWI	GCNNNNNNNGC	4 cut(s)	511, 530, 1286, 1366
BstNI	CCWGG	2 cut(s)	116, 609
BstNSI	RCATGY	4 cut(s)	368, 396, 472, 1286
BstSCI	CCNGG	2 cut(s)	114, 607
BstSFI	CTRYAG	1 cut(s)	1224
BstUI	CGCG	2 cut(s)	524, 1045
BstV1I	GCAGC	3 cut(s)	826, 829, 961
BstX2I	RGATCY	1 cut(s)	24
BstYI	RGATCY	1 cut(s)	24
Bsu36I	CCTNAGG	1 cut(s)	1058
BsuRI	GGCC	1 cut(s)	604
BtsCI	GGATG	4 cut(s)	330, 406, 657, 959
BtsI	GCAGTG	1 cut(s)	162
BtsIMutI	CAGTG	1 cut(s)	162
Cac8I	GCNNGC	5 cut(s)	348, 1041, 1070, 1144, 1284
CaiI	CAGNNNCTG	1 cut(s)	614
CciI	TCATGA	2 cut(s)	325, 1177
CfoI	GCGC	5 cut(s)	74, 904, 1045, 1282, 1334
Cfr10I	RCCGGY	1 cut(s)	244
Cfr13I	GGNCC	4 cut(s)	236, 602, 1025, 1062
Csp6I	GTAC	1 cut(s)	520
CspCI	CAANNNNNGTGG	2 cut(s)	1182, 1217
CviQI	GTAC	1 cut(s)	520
DdeI	CTNAG	8 cut(s)	377, 645, 912, 1058, 1170, 1259, 1276, 1365
DinI	GGCGCC	1 cut(s)	73
DpnI	GATC	4 cut(s)	26, 261, 999, 1255
DpnII	GATC	4 cut(s)	24, 259, 997, 1253
Eam1104I	CTCTTC	2 cut(s)	206, 378
EarI	CTCTTC	2 cut(s)	206, 378
Eco31I	GGTCTC	1 cut(s)	346
Eco32I	GATATC	2 cut(s)	55, 985
Eco47I	GGWCC	3 cut(s)	236, 1025, 1062
Eco57I	CTGAAG	2 cut(s)	521, 861
Eco81I	CCTNAGG	1 cut(s)	1058
EcoO109I	RGGNCCY	1 cut(s)	1062
EcoRI	GAATTC	1 cut(s)	458
EcoRII	CCWGG	2 cut(s)	114, 607
EcoRV	GATATC	2 cut(s)	55, 985
EgeI	GGCGCC	1 cut(s)	73
EheI	GGCGCC	1 cut(s)	73
FaqI	GGGAC	3 cut(s)	625, 670, 1011
FauI	CCCGC	1 cut(s)	687
FauNDI	CATATG	1 cut(s)	1018
Fnu4HI	GCNGC	5 cut(s)	525, 840, 843, 975, 1287
FokI	GGATG	4 cut(s)	317, 413, 644, 946
Fsp4HI	GCNGC	5 cut(s)	525, 840, 843, 975, 1287
FspBI	CTAG	3 cut(s)	528, 1143, 1317
FspI	TGCGCA	1 cut(s)	1333
GlaI	GCGC	5 cut(s)	73, 903, 1044, 1281, 1333
GluI	GCNGC	5 cut(s)	525, 840, 843, 975, 1287
GsuI	CTGGAG	2 cut(s)	591, 655
HaeII	RGCGCY	1 cut(s)	75
HaeIII	GGCC	1 cut(s)	604
HapII	CCGG	1 cut(s)	245
HhaI	GCGC	5 cut(s)	74, 904, 1045, 1282, 1334
Hin1I	GRCGYC	1 cut(s)	72
Hin6I	GCGC	5 cut(s)	72, 902, 1043, 1280, 1332
HinP1I	GCGC	5 cut(s)	72, 902, 1043, 1280, 1332
HindIII	AAGCTT	3 cut(s)	478, 758, 1265
HinfI	GANTC	9 cut(s)	13, 271, 288, 322, 442, 491, 580, 881, 1174
HpaII	CCGG	1 cut(s)	245
HphI	GGTGA	1 cut(s)	907
Hpy166II	GTNNAC	1 cut(s)	1250
Hpy188III	TCNNGA	5 cut(s)	268, 326, 672, 776, 1178
Hpy8I	GTNNAC	1 cut(s)	1250
Hpy99I	CGWCG	2 cut(s)	89, 160
HpyAV	CCTTC	4 cut(s)	108, 407, 439, 885
HpyCH4III	ACNGT	1 cut(s)	1307
HpyCH4IV	ACGT	1 cut(s)	30
HpyCH4V	TGCA	9 cut(s)	34, 319, 364, 533, 707, 755, 1039, 1216, 1226
HpyF10VI	GCNNNNNNNGC	4 cut(s)	511, 530, 1286, 1366
HpyF3I	CTNAG	8 cut(s)	377, 645, 912, 1058, 1170, 1259, 1276, 1365
HpySE526I	ACGT	1 cut(s)	30
Hsp92I	GRCGYC	1 cut(s)	72
HspAI	GCGC	5 cut(s)	72, 902, 1043, 1280, 1332
KasI	GGCGCC	1 cut(s)	71
Kzo9I	GATC	4 cut(s)	24, 259, 997, 1253
LmnI	GCTCC	3 cut(s)	13, 389, 1357
Lsp1109I	GCAGC	3 cut(s)	826, 829, 961
LweI	GCATC	1 cut(s)	1171
MaeI	CTAG	3 cut(s)	528, 1143, 1317
MaeII	ACGT	1 cut(s)	30
MaeIII	GTNAC	2 cut(s)	299, 1310
MalI	GATC	4 cut(s)	26, 261, 999, 1255
MboI	GATC	4 cut(s)	24, 259, 997, 1253
MboII	GAAGA	4 cut(s)	223, 395, 414, 437
MfeI	CAATTG	1 cut(s)	689
MflI	RGATCY	1 cut(s)	24
MhlI	GDGCHC	2 cut(s)	10, 164
MluCI	AATT	6 cut(s)	458, 689, 771, 948, 1092, 1102
Mly113I	GGCGCC	1 cut(s)	72
MlyI	GAGTC	2 cut(s)	22, 265
MmeI	TCCRAC	1 cut(s)	987
MroXI	GAANNNNTTC	1 cut(s)	441
MseI	TTAA	6 cut(s)	482, 558, 666, 702, 953, 1244
MspA1I	CMGCKG	2 cut(s)	191, 916
MspI	CCGG	1 cut(s)	245
MspR9I	CCNGG	2 cut(s)	116, 609
MunI	CAATTG	1 cut(s)	689
Mva1269I	GAATGC	2 cut(s)	207, 904
MvaI	CCWGG	2 cut(s)	116, 609
MvnI	CGCG	2 cut(s)	524, 1045
MwoI	GCNNNNNNNGC	4 cut(s)	511, 530, 1286, 1366
NarI	GGCGCC	1 cut(s)	72
NdeI	CATATG	1 cut(s)	1018
NdeII	GATC	4 cut(s)	24, 259, 997, 1253
NheI	GCTAGC	1 cut(s)	1142
NlaIV	GGNNCC	3 cut(s)	73, 249, 1027
NmuCI	GTSAC	2 cut(s)	299, 1310
NsbI	TGCGCA	1 cut(s)	1333
NspI	RCATGY	4 cut(s)	368, 396, 472, 1286
PaeI	GCATGC	1 cut(s)	1286
PagI	TCATGA	2 cut(s)	325, 1177
PcsI	WCGNNNNNNNCGW	1 cut(s)	993
PctI	GAATGC	2 cut(s)	207, 904
PdmI	GAANNNNTTC	1 cut(s)	441
PfeI	GAWTC	7 cut(s)	288, 322, 442, 491, 580, 881, 1174
PflFI	GACNNNGTC	1 cut(s)	122
PflMI	CCANNNNNTGG	1 cut(s)	614
PkrI	GCNGC	5 cut(s)	526, 841, 844, 976, 1288
Ple19I	CGATCG	1 cut(s)	1000
PleI	GAGTC	2 cut(s)	21, 265
PluTI	GGCGCC	1 cut(s)	75
PpsI	GAGTC	2 cut(s)	21, 265
Ppu21I	YACGTR	1 cut(s)	31
PpuMI	RGGWCCY	1 cut(s)	1062
Psp5II	RGGWCCY	1 cut(s)	1062
Psp6I	CCWGG	2 cut(s)	114, 607
PspGI	CCWGG	2 cut(s)	114, 607
PspN4I	GGNNCC	3 cut(s)	73, 249, 1027
PspPI	GGNCC	4 cut(s)	236, 602, 1025, 1062
PspPPI	RGGWCCY	1 cut(s)	1062
PstI	CTGCAG	1 cut(s)	1228
PstNI	CAGNNNCTG	1 cut(s)	614
PsuI	RGATCY	1 cut(s)	24
PsyI	GACNNNGTC	1 cut(s)	122
PvuI	CGATCG	1 cut(s)	1000
PvuII	CAGCTG	2 cut(s)	191, 916
RsaI	GTAC	1 cut(s)	521
RsaNI	GTAC	1 cut(s)	520
SaqAI	TTAA	6 cut(s)	482, 558, 666, 702, 953, 1244
SatI	GCNGC	5 cut(s)	525, 840, 843, 975, 1287
Sau3AI	GATC	4 cut(s)	24, 259, 997, 1253
Sau96I	GGNCC	4 cut(s)	236, 602, 1025, 1062
SchI	GAGTC	2 cut(s)	22, 265
ScrFI	CCNGG	2 cut(s)	116, 609
SduI	GDGCHC	2 cut(s)	10, 164
SfaNI	GCATC	1 cut(s)	1171
SfcI	CTRYAG	1 cut(s)	1224
SfoI	GGCGCC	1 cut(s)	73
SinI	GGWCC	3 cut(s)	236, 1025, 1062
SmlI	CTYRAG	2 cut(s)	149, 206
SmoI	CTYRAG	2 cut(s)	149, 206
SphI	GCATGC	1 cut(s)	1286
Sse9I	AATT	6 cut(s)	458, 689, 771, 948, 1092, 1102
SsiI	CCGC	5 cut(s)	184, 524, 680, 855, 1286
SspDI	GGCGCC	1 cut(s)	71
SspMI	CTAG	3 cut(s)	528, 1143, 1317
StyD4I	CCNGG	2 cut(s)	114, 607
TaaI	ACNGT	1 cut(s)	1307
TaiI	ACGT	1 cut(s)	33
TaqI	TCGA	4 cut(s)	158, 462, 996, 1000
TasI	AATT	6 cut(s)	458, 689, 771, 948, 1092, 1102
TauI	GCSGC	2 cut(s)	527, 1289
TfiI	GAWTC	7 cut(s)	288, 322, 442, 491, 580, 881, 1174
Tru1I	TTAA	6 cut(s)	482, 558, 666, 702, 953, 1244
Tru9I	TTAA	6 cut(s)	482, 558, 666, 702, 953, 1244
TscAI	CASTG	1 cut(s)	169
TseFI	GTSAC	2 cut(s)	299, 1310
TseI	GCWGC	3 cut(s)	839, 842, 974
Tsp45I	GTSAC	2 cut(s)	299, 1310
TspDTI	ATGAA	6 cut(s)	450, 504, 837, 1065, 1166, 1233
TspRI	CASTG	1 cut(s)	169
Tth111I	GACNNNGTC	1 cut(s)	122
Van91I	CCANNNNNTGG	1 cut(s)	614
VpaK11BI	GGWCC	3 cut(s)	236, 1025, 1062
XapI	RAATTY	4 cut(s)	458, 771, 1092, 1102
XceI	RCATGY	4 cut(s)	368, 396, 472, 1286
XmnI	GAANNNNTTC	1 cut(s)	441
XspI	CTAG	3 cut(s)	528, 1143, 1317

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.