Type I phosphodiesterase / nucleotide pyrophosphatase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G17250 |
| fragaria_vesca | FvH4_4g21830 FvH4_4g21830 FvH4_4g21830 |
| malus_domestica | MD13G1136600.v1.1 MD16G1131900.v1.1 |
| prunus_persica | Prupe.1G208800_v2.0.a1 Prupe.1G208800_v2.0.a1 Prupe.1G208800_v2.0.a1 Prupe.1G208800_v2.0.a1 |
| pyrus_communis | pycom13g11900 pycom16g11630 |
| rosa_chinensis | RchiOBHm_Chr4g0428061 |
| rosa_laevigata | RLG00000007185 |
| rosa_multiflora | Rmu_sc0005263.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00369780 |
| rosa_rugosa | Rorug04G0222100 |
| rosa_samantha | Rh4AG279200 Rh4BG284600 Rh4CG300300 Rh4DG281700 |
| rosa_wichuraiana | Rw4G024260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1246 |
| Acc16I | TGCGCA | 1 cut(s) | 708 |
| Acc36I | ACCTGC | 1 cut(s) | 1246 |
| AccB1I | GGYRCC | 1 cut(s) | 1190 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1155 |
| AccII | CGCG | 2 cut(s) | 82, 100 |
| AciI | CCGC | 6 cut(s) | 830, 909, 1747, 1774, 2131, 2454 |
| AclWI | GGATC | 4 cut(s) | 392, 909, 2106, 2299 |
| AcsI | RAATTY | 3 cut(s) | 1159, 1459, 2384 |
| AcuI | CTGAAG | 3 cut(s) | 35, 1547, 2808 |
| AfaI | GTAC | 5 cut(s) | 124, 955, 1236, 1414, 1751 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1155, 2006, 2007 |
| AflIII | ACRYGT | 1 cut(s) | 80 |
| AhlI | ACTAGT | 1 cut(s) | 410 |
| AjnI | CCWGG | 4 cut(s) | 630, 825, 835, 1719 |
| AleI | CACNNNNGTG | 1 cut(s) | 1882 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 94, 126 |
| Alw21I | GWGCWC | 3 cut(s) | 487, 663, 1977 |
| Alw26I | GTCTC | 2 cut(s) | 428, 2546 |
| AlwI | GGATC | 4 cut(s) | 392, 909, 2106, 2299 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1155 |
| Ama87I | CYCGRG | 2 cut(s) | 187, 289 |
| AoxI | GGCC | 2 cut(s) | 2223, 2476 |
| ApoI | RAATTY | 3 cut(s) | 1159, 1459, 2384 |
| AseI | ATTAAT | 2 cut(s) | 513, 768 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 476, 1463 |
| AspLEI | GCGC | 3 cut(s) | 709, 2468, 2646 |
| AspS9I | GGNCC | 5 cut(s) | 222, 724, 833, 1362, 2223 |
| AsuC2I | CCSGG | 1 cut(s) | 1489 |
| AsuHPI | GGTGA | 6 cut(s) | 556, 566, 887, 1270, 1869, 2713 |
| AvaI | CYCGRG | 2 cut(s) | 187, 289 |
| AvaII | GGWCC | 4 cut(s) | 222, 724, 833, 1362 |
| AxyI | CCTNAGG | 1 cut(s) | 2625 |
| BanI | GGYRCC | 1 cut(s) | 1190 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2574, 2606 |
| BbsI | GAAGAC | 2 cut(s) | 2417, 2740 |
| Bbv12I | GWGCWC | 3 cut(s) | 487, 663, 1977 |
| BceAI | ACGGC | 1 cut(s) | 1423 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 266, 300, 2428, 2462 |
| BciT130I | CCWGG | 4 cut(s) | 632, 827, 837, 1721 |
| BciVI | GTATCC | 1 cut(s) | 628 |
| BcnI | CCSGG | 1 cut(s) | 1489 |
| BcoDI | GTCTC | 2 cut(s) | 428, 2546 |
| BcuI | ACTAGT | 1 cut(s) | 410 |
| BfaI | CTAG | 2 cut(s) | 411, 1892 |
| BfmI | CTRYAG | 3 cut(s) | 918, 1344, 1824 |
| BfoI | RGCGCY | 1 cut(s) | 2647 |
| BfuAI | ACCTGC | 1 cut(s) | 1246 |
| BfuI | GTATCC | 1 cut(s) | 628 |
| BglII | AGATCT | 2 cut(s) | 378, 1333 |
| BmcAI | AGTACT | 1 cut(s) | 124 |
| Bme1390I | CCNGG | 5 cut(s) | 632, 827, 837, 1489, 1721 |
| Bme18I | GGWCC | 4 cut(s) | 222, 724, 833, 1362 |
| BmeT110I | CYCGRG | 2 cut(s) | 187, 289 |
| BmgT120I | GGNCC | 5 cut(s) | 222, 724, 833, 1362, 2223 |
| BmiI | GGNNCC | 4 cut(s) | 834, 978, 1147, 1192 |
| BmrFI | CCNGG | 5 cut(s) | 632, 827, 837, 1489, 1721 |
| BmrI | ACTGGG | 1 cut(s) | 1539 |
| BmsI | GCATC | 3 cut(s) | 253, 641, 1878 |
| BmuI | ACTGGG | 1 cut(s) | 1539 |
| BpiI | GAAGAC | 2 cut(s) | 2417, 2740 |
| BpmI | CTGGAG | 3 cut(s) | 462, 1887, 2363 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1128 |
| BpuEI | CTTGAG | 2 cut(s) | 410, 1453 |
| BpuMI | CCSGG | 1 cut(s) | 1489 |
| Bsa29I | ATCGAT | 1 cut(s) | 276 |
| BsaAI | YACGTR | 2 cut(s) | 1981, 2192 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1034 |
| BsaJI | CCNNGG | 4 cut(s) | 317, 880, 1141, 1582 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2580, 2610 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1155, 2006, 2007 |
| Bse1I | ACTGG | 7 cut(s) | 230, 445, 1149, 1534, 1627, 1735, 2650 |
| Bse21I | CCTNAGG | 1 cut(s) | 2625 |
| Bse3DI | GCAATG | 3 cut(s) | 1986, 2060, 2423 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1034 |
| BseBI | CCWGG | 4 cut(s) | 632, 827, 837, 1721 |
| BseCI | ATCGAT | 1 cut(s) | 276 |
| BseDI | CCNNGG | 4 cut(s) | 317, 880, 1141, 1582 |
| BseJI | GATNNNNATC | 1 cut(s) | 1034 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1155, 2006, 2007 |
| BseMI | GCAATG | 3 cut(s) | 1986, 2060, 2423 |
| BseMII | CTCAG | 7 cut(s) | 221, 283, 975, 1119, 1828, 1874, 2639 |
| BseNI | ACTGG | 7 cut(s) | 230, 445, 1149, 1534, 1627, 1735, 2650 |
| BseRI | GAGGAG | 3 cut(s) | 2588, 2613, 2798 |
| BsgI | GTGCAG | 3 cut(s) | 1647, 2172, 2186 |
| Bsh1236I | CGCG | 2 cut(s) | 82, 100 |
| BshFI | GGCC | 2 cut(s) | 2225, 2478 |
| BshNI | GGYRCC | 1 cut(s) | 1190 |
| BshVI | ATCGAT | 1 cut(s) | 276 |
| BsiHKAI | GWGCWC | 3 cut(s) | 487, 663, 1977 |
| BsiHKCI | CYCGRG | 2 cut(s) | 187, 289 |
| BsiSI | CCGG | 1 cut(s) | 1489 |
| BslFI | GGGAC | 2 cut(s) | 846, 928 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1155, 2006, 2007 |
| BsmAI | GTCTC | 2 cut(s) | 428, 2546 |
| BsmBI | CGTCTC | 1 cut(s) | 428 |
| BsmFI | GGGAC | 2 cut(s) | 846, 928 |
| BsmI | GAATGC | 2 cut(s) | 1252, 2133 |
| BsnI | GGCC | 2 cut(s) | 2225, 2478 |
| BsoBI | CYCGRG | 2 cut(s) | 187, 289 |
| Bsp1286I | GDGCHC | 3 cut(s) | 487, 663, 1977 |
| Bsp19I | CCATGG | 3 cut(s) | 317, 880, 1582 |
| BspACI | CCGC | 6 cut(s) | 830, 909, 1747, 1774, 2131, 2454 |
| BspANI | GGCC | 2 cut(s) | 2225, 2478 |
| BspCNI | CTCAG | 7 cut(s) | 220, 282, 976, 1120, 1827, 1873, 2638 |
| BspDI | ATCGAT | 1 cut(s) | 276 |
| BspFNI | CGCG | 2 cut(s) | 82, 100 |
| BspLI | GGNNCC | 4 cut(s) | 834, 978, 1147, 1192 |
| BspMAI | CTGCAG | 2 cut(s) | 922, 1348 |
| BspMI | ACCTGC | 1 cut(s) | 1246 |
| BspPI | GGATC | 4 cut(s) | 392, 909, 2106, 2299 |
| BspT107I | GGYRCC | 1 cut(s) | 1190 |
| BsrDI | GCAATG | 3 cut(s) | 1986, 2060, 2423 |
| BsrI | ACTGG | 7 cut(s) | 230, 445, 1149, 1534, 1627, 1735, 2650 |
| BssECI | CCNNGG | 4 cut(s) | 317, 880, 1141, 1582 |
| BssT1I | CCWWGG | 4 cut(s) | 317, 880, 1141, 1582 |
| Bst2UI | CCWGG | 4 cut(s) | 632, 827, 837, 1721 |
| Bst4CI | ACNGT | 8 cut(s) | 122, 540, 573, 640, 2029, 2146, 2236, 2698 |
| Bst6I | CTCTTC | 2 cut(s) | 918, 1312 |
| BstBAI | YACGTR | 2 cut(s) | 1981, 2192 |
| BstC8I | GCNNGC | 8 cut(s) | 351, 1663, 1848, 1973, 2301, 2323, 2452, 2456 |
| BstDSI | CCRYGG | 3 cut(s) | 317, 880, 1582 |
| BstEII | GGTNACC | 1 cut(s) | 875 |
| BstFNI | CGCG | 2 cut(s) | 82, 100 |
| BstH2I | RGCGCY | 1 cut(s) | 2647 |
| BstHHI | GCGC | 3 cut(s) | 709, 2468, 2646 |
| BstMAI | GTCTC | 2 cut(s) | 428, 2546 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 106, 293, 1188, 1843, 2643 |
| BstNI | CCWGG | 4 cut(s) | 632, 827, 837, 1721 |
| BstNSI | RCATGY | 2 cut(s) | 1121, 2443 |
| BstPI | GGTNACC | 1 cut(s) | 875 |
| BstSCI | CCNGG | 5 cut(s) | 630, 825, 835, 1487, 1719 |
| BstSFI | CTRYAG | 3 cut(s) | 918, 1344, 1824 |
| BstSNI | TACGTA | 1 cut(s) | 1981 |
| BstUI | CGCG | 2 cut(s) | 82, 100 |
| BstV2I | GAAGAC | 2 cut(s) | 2417, 2740 |
| BstX2I | RGATCY | 2 cut(s) | 378, 1333 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 318 |
| BstYI | RGATCY | 2 cut(s) | 378, 1333 |
| Bsu15I | ATCGAT | 1 cut(s) | 276 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2625 |
| BsuI | GTATCC | 1 cut(s) | 628 |
| BsuRI | GGCC | 2 cut(s) | 2225, 2478 |
| BsuTUI | ATCGAT | 1 cut(s) | 276 |
| BtgI | CCRYGG | 3 cut(s) | 317, 880, 1582 |
| BtgZI | GCGATG | 1 cut(s) | 46 |
| BtsI | GCAGTG | 1 cut(s) | 1608 |
| BtsIMutI | CAGTG | 3 cut(s) | 1608, 1620, 1959 |
| BveI | ACCTGC | 1 cut(s) | 1246 |
| Cac8I | GCNNGC | 8 cut(s) | 351, 1663, 1848, 1973, 2301, 2323, 2452, 2456 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1155 |
| CfoI | GCGC | 3 cut(s) | 709, 2468, 2646 |
| Cfr13I | GGNCC | 5 cut(s) | 222, 724, 833, 1362, 2223 |
| ClaI | ATCGAT | 1 cut(s) | 276 |
| CseI | GACGC | 3 cut(s) | 355, 410, 2707 |
| CsiI | ACCWGGT | 1 cut(s) | 835 |
| Csp6I | GTAC | 5 cut(s) | 123, 954, 1235, 1413, 1750 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 107, 142 |
| CviQI | GTAC | 5 cut(s) | 123, 954, 1235, 1413, 1750 |
| Eam1104I | CTCTTC | 2 cut(s) | 918, 1312 |
| EarI | CTCTTC | 2 cut(s) | 918, 1312 |
| EciI | GGCGGA | 1 cut(s) | 924 |
| Eco105I | TACGTA | 1 cut(s) | 1981 |
| Eco130I | CCWWGG | 4 cut(s) | 317, 880, 1141, 1582 |
| Eco32I | GATATC | 2 cut(s) | 1092, 1329 |
| Eco47I | GGWCC | 4 cut(s) | 222, 724, 833, 1362 |
| Eco57I | CTGAAG | 3 cut(s) | 35, 1547, 2808 |
| Eco81I | CCTNAGG | 1 cut(s) | 2625 |
| Eco88I | CYCGRG | 2 cut(s) | 187, 289 |
| Eco91I | GGTNACC | 1 cut(s) | 875 |
| EcoO65I | GGTNACC | 1 cut(s) | 875 |
| EcoRII | CCWGG | 4 cut(s) | 630, 825, 835, 1719 |
| EcoRV | GATATC | 2 cut(s) | 1092, 1329 |
| EcoT14I | CCWWGG | 4 cut(s) | 317, 880, 1141, 1582 |
| EcoT22I | ATGCAT | 2 cut(s) | 656, 2441 |
| ErhI | CCWWGG | 4 cut(s) | 317, 880, 1141, 1582 |
| Esp3I | CGTCTC | 1 cut(s) | 428 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2523, 2555, 2759, 2791 |
| FaqI | GGGAC | 2 cut(s) | 846, 928 |
| FauI | CCCGC | 2 cut(s) | 823, 2447 |
| FauNDI | CATATG | 1 cut(s) | 1924 |
| FspBI | CTAG | 2 cut(s) | 411, 1892 |
| FspI | TGCGCA | 1 cut(s) | 708 |
| GlaI | GCGC | 3 cut(s) | 708, 2467, 2645 |
| GsuI | CTGGAG | 3 cut(s) | 462, 1887, 2363 |
| HaeII | RGCGCY | 1 cut(s) | 2647 |
| HaeIII | GGCC | 2 cut(s) | 2225, 2478 |
| HapII | CCGG | 1 cut(s) | 1489 |
| HgaI | GACGC | 3 cut(s) | 355, 410, 2707 |
| HhaI | GCGC | 3 cut(s) | 709, 2468, 2646 |
| Hin6I | GCGC | 3 cut(s) | 707, 2466, 2644 |
| HinP1I | GCGC | 3 cut(s) | 707, 2466, 2644 |
| HincII | GTYRAC | 3 cut(s) | 30, 643, 1123 |
| HindII | GTYRAC | 3 cut(s) | 30, 643, 1123 |
| HindIII | AAGCTT | 1 cut(s) | 1782 |
| HpaII | CCGG | 1 cut(s) | 1489 |
| HphI | GGTGA | 6 cut(s) | 556, 566, 887, 1270, 1869, 2713 |
| Hpy166II | GTNNAC | 7 cut(s) | 30, 416, 643, 724, 1007, 1123, 1500 |
| Hpy188III | TCNNGA | 7 cut(s) | 49, 176, 983, 1904, 2551, 2566, 2728 |
| Hpy8I | GTNNAC | 7 cut(s) | 30, 416, 643, 724, 1007, 1123, 1500 |
| Hpy99I | CGWCG | 1 cut(s) | 137 |
| HpyAV | CCTTC | 4 cut(s) | 1439, 1571, 1691, 2489 |
| HpyCH4III | ACNGT | 8 cut(s) | 122, 540, 573, 640, 2029, 2146, 2236, 2698 |
| HpyCH4IV | ACGT | 5 cut(s) | 135, 1227, 1980, 2191, 2781 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 106, 293, 1188, 1843, 2643 |
| HpySE526I | ACGT | 5 cut(s) | 135, 1227, 1980, 2191, 2781 |
| HspAI | GCGC | 3 cut(s) | 707, 2466, 2644 |
| LmnI | GCTCC | 7 cut(s) | 134, 173, 490, 778, 1906, 2489, 2767 |
| LweI | GCATC | 3 cut(s) | 253, 641, 1878 |
| MabI | ACCWGGT | 1 cut(s) | 835 |
| MaeI | CTAG | 2 cut(s) | 411, 1892 |
| MaeII | ACGT | 5 cut(s) | 135, 1227, 1980, 2191, 2781 |
| MaeIII | GTNAC | 6 cut(s) | 875, 1648, 2023, 2113, 2698, 2719 |
| MflI | RGATCY | 2 cut(s) | 378, 1333 |
| MhlI | GDGCHC | 3 cut(s) | 487, 663, 1977 |
| MluI | ACGCGT | 1 cut(s) | 80 |
| MlyI | GAGTC | 2 cut(s) | 199, 2431 |
| MmeI | TCCRAC | 3 cut(s) | 156, 200, 756 |
| Mph1103I | ATGCAT | 2 cut(s) | 656, 2441 |
| MroXI | GAANNNNTTC | 2 cut(s) | 476, 1463 |
| MseI | TTAA | 8 cut(s) | 332, 384, 434, 513, 624, 768, 893, 1434 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1385, 1882, 1970 |
| MspA1I | CMGCKG | 1 cut(s) | 2454 |
| MspI | CCGG | 1 cut(s) | 1489 |
| MspR9I | CCNGG | 5 cut(s) | 632, 827, 837, 1489, 1721 |
| Mva1269I | GAATGC | 2 cut(s) | 1252, 2133 |
| MvaI | CCWGG | 4 cut(s) | 632, 827, 837, 1721 |
| MvnI | CGCG | 2 cut(s) | 82, 100 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 106, 293, 1188, 1843, 2643 |
| NciI | CCSGG | 1 cut(s) | 1489 |
| NcoI | CCATGG | 3 cut(s) | 317, 880, 1582 |
| NdeI | CATATG | 1 cut(s) | 1924 |
| NlaIV | GGNNCC | 4 cut(s) | 834, 978, 1147, 1192 |
| NmeAIII | GCCGAG | 1 cut(s) | 696 |
| NmuCI | GTSAC | 4 cut(s) | 875, 2113, 2698, 2719 |
| NsbI | TGCGCA | 1 cut(s) | 708 |
| NsiI | ATGCAT | 2 cut(s) | 656, 2441 |
| NspI | RCATGY | 2 cut(s) | 1121, 2443 |
| OliI | CACNNNNGTG | 1 cut(s) | 1882 |
| PaqCI | CACCTGC | 1 cut(s) | 1246 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2778 |
| PctI | GAATGC | 2 cut(s) | 1252, 2133 |
| PdmI | GAANNNNTTC | 2 cut(s) | 476, 1463 |
| PfeI | GAWTC | 8 cut(s) | 52, 179, 273, 365, 752, 1516, 1654, 2562 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1155 |
| PleI | GAGTC | 2 cut(s) | 199, 2430 |
| PpsI | GAGTC | 2 cut(s) | 199, 2430 |
| Ppu21I | YACGTR | 2 cut(s) | 1981, 2192 |
| PshBI | ATTAAT | 2 cut(s) | 513, 768 |
| Psp6I | CCWGG | 4 cut(s) | 630, 825, 835, 1719 |
| PspEI | GGTNACC | 1 cut(s) | 875 |
| PspGI | CCWGG | 4 cut(s) | 630, 825, 835, 1719 |
| PspN4I | GGNNCC | 4 cut(s) | 834, 978, 1147, 1192 |
| PspPI | GGNCC | 5 cut(s) | 222, 724, 833, 1362, 2223 |
| PstI | CTGCAG | 2 cut(s) | 922, 1348 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1155 |
| PsuI | RGATCY | 2 cut(s) | 378, 1333 |
| RsaI | GTAC | 5 cut(s) | 124, 955, 1236, 1414, 1751 |
| RsaNI | GTAC | 5 cut(s) | 123, 954, 1235, 1413, 1750 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1385, 1882, 1970 |
| SaqAI | TTAA | 8 cut(s) | 332, 384, 434, 513, 624, 768, 893, 1434 |
| Sau96I | GGNCC | 5 cut(s) | 222, 724, 833, 1362, 2223 |
| ScaI | AGTACT | 1 cut(s) | 124 |
| SchI | GAGTC | 2 cut(s) | 199, 2431 |
| ScrFI | CCNGG | 5 cut(s) | 632, 827, 837, 1489, 1721 |
| SduI | GDGCHC | 3 cut(s) | 487, 663, 1977 |
| SexAI | ACCWGGT | 1 cut(s) | 835 |
| SfaNI | GCATC | 3 cut(s) | 253, 641, 1878 |
| SfcI | CTRYAG | 3 cut(s) | 918, 1344, 1824 |
| SinI | GGWCC | 4 cut(s) | 222, 724, 833, 1362 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1385, 1882, 1970 |
| SmlI | CTYRAG | 2 cut(s) | 425, 1468 |
| SmoI | CTYRAG | 2 cut(s) | 425, 1468 |
| SnaBI | TACGTA | 1 cut(s) | 1981 |
| SpeI | ACTAGT | 1 cut(s) | 410 |
| SsiI | CCGC | 6 cut(s) | 830, 909, 1747, 1774, 2131, 2454 |
| SspI | AATATT | 1 cut(s) | 1454 |
| SspMI | CTAG | 2 cut(s) | 411, 1892 |
| StyD4I | CCNGG | 5 cut(s) | 630, 825, 835, 1487, 1719 |
| StyI | CCWWGG | 4 cut(s) | 317, 880, 1141, 1582 |
| TaaI | ACNGT | 8 cut(s) | 122, 540, 573, 640, 2029, 2146, 2236, 2698 |
| TaiI | ACGT | 5 cut(s) | 138, 1230, 1983, 2194, 2784 |
| TaqI | TCGA | 5 cut(s) | 276, 990, 1657, 2550, 2567 |
| TatI | WGTACW | 4 cut(s) | 122, 953, 1234, 1412 |
| TfiI | GAWTC | 8 cut(s) | 52, 179, 273, 365, 752, 1516, 1654, 2562 |
| Tru1I | TTAA | 8 cut(s) | 332, 384, 434, 513, 624, 768, 893, 1434 |
| Tru9I | TTAA | 8 cut(s) | 332, 384, 434, 513, 624, 768, 893, 1434 |
| TscAI | CASTG | 3 cut(s) | 1608, 1627, 1959 |
| TseFI | GTSAC | 4 cut(s) | 875, 2113, 2698, 2719 |
| Tsp45I | GTSAC | 4 cut(s) | 875, 2113, 2698, 2719 |
| TspDTI | ATGAA | 5 cut(s) | 357, 499, 1232, 1278, 2044 |
| TspRI | CASTG | 3 cut(s) | 1608, 1627, 1959 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1155 |
| VpaK11BI | GGWCC | 4 cut(s) | 222, 724, 833, 1362 |
| VspI | ATTAAT | 2 cut(s) | 513, 768 |
| XapI | RAATTY | 3 cut(s) | 1159, 1459, 2384 |
| XceI | RCATGY | 2 cut(s) | 1121, 2443 |
| XmnI | GAANNNNTTC | 2 cut(s) | 476, 1463 |
| XspI | CTAG | 2 cut(s) | 411, 1892 |
| ZrmI | AGTACT | 1 cut(s) | 124 |
| Zsp2I | ATGCAT | 2 cut(s) | 656, 2441 |