Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0009386

Physical Location & Seq

Genomic Coordinates Reverse (-)

24810146 .. 24817788

Gene Structure 7643 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g21830.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2844 bp

ATGGGGAAAGGAATATGGGTGCACTGGGTGATGATGCTCCTCCACCTCGTCGCCGTAGTCATATTCACCAGAGGCTTCCTCCTCACCCGAACCGAGCTCCCTAACTTCAGCCAATGCGACGACGTTTCACAATCCCCTTGCTTCTTCCAAAACCAGAGCCACAATCAGAAGCGCTGCTGGAGCAAACCTGCCATTGATAAACTCGTCATAATCGTCTTCGACGCCCTCCGGTTTGATTTTGTAGCTCCAAGTACTTTTTTTCAAGAGAAGAAGCCATGGATGAATAAATTGAAGCTTATTCAAGACCTGGCTGCTACAAATGCATCGTCGGCTCGGATCTTCAAAGCCATTGCTGATCCACCTACCACTAGTTTGCAGCGTTTGAAGGGATTGACAACCGGTGGACTGCCGACTTTCATTGATGTTGGGAATAGCTTTGGTGCTCCAGCGATTGTTGAAGATAACTTGTTACATCAGTTCGCTCAAAATGGAAAGAGAGTTGTCATGATGGGGGATGATACATGGACGCAGTTGTTTCCTCATCATTTTCAGAAAGCTTTTCCTTACCCGTCTTTTAATGTTAGAGATCTTGACACGGTGGACAACGGATGCATTGGACACCTTCTTCCATACTTGCATCGAGGTGATTGGGATGTCCTTATAGCACACTTTCTTGGTGTGGATCATGCAGGTCACATATTTGGGGTTGATTCTGGGCAAATGATAGAGAAGTTGGAGCAATACAACACCGTTTTGCAAAATGTAGTTGAAGCACTGGAGAGCCAGTCTGCACCGGGGGGATTACACGAGAATACTTTACTACTTGTGATGGGTGATCATGGGCAGACTGTAAATGGAGATCATGGTGGGGGGACTGCTGAAGAGGTTGAGACATCCATGTTTGCTCTGAGCTTTAAGAATCCCCCATCCTCCATACCAGCAGAATTTGATACTTCATCTTGTGGACTAGATTTGGATAAGAGGAATATCTGCATCAGTTCCGTCCAACAGCTTGACTTTGCAGCGACGATATCAGCGCTGCTTGGTATTCCCTTTCCTTTTGGAAGTATTGGGCGTGTTAATCCTCAGCTATATGCCTTAGGCGGTGGAACATGGAATTTCGAAGACAGTTTGGGAAATTGCCAGAATCAGCCAAAGTTAAATGAGTGGATGCTGAATTATGTCAATGTACTCTGTACCAATTCTTGGCAGGTAAAACGATATATAGATATTTATTCAGCTTCTTCAGTTGTTGGATTTTCCCATGAAGATTTGTTGCACATAGGAAACATATATGCTAAAGCAGAGGAGAGATGGTCACAAACTACAAAGAAGTTGTTGTCACATAAAAAGGAAAGCTGCACTGAATTGTTGCCTGCTCTTAAGAGACAAGTTGAGGAGTATTCTACTTTCCTAGCAAGTGTTGCTGAACTTGCACGGTCCAAATGGACTGAGTTTAATTTAAAGTTGATGGGTACAGGACTTGGTATTATGTTGATATCACTCATTATCCATTTCCTTGCAATTAAGAAAGTGAAGGAGCAATATGGTTTTTCTTTCACATCATCTGGAGATTCTGGAATTTCCTTTGGGTTAATTTTTGCTTGTTTTGTTGGGGTGATACGTGCATGCAGCTTCCTCTCGAATAGTTTCATCTTGGAAGAAGGAAAAGTGGCATGCTTTCTTTTGGCTACAACTGGATTTGTTAAGTTGCGATCTTCATTCATGAAGAAGAAGATGATATTAGAAGCATTTGTTTTTCTTCTATTGGTCACCATTTGCAGATTTACTATTCAATTTGGATTGTCAAAGCAGGCTCCTAGTTCTGAAGATATGAGTGCATATCCTTCGTGGATGCTTGGAATCACCTCTCTTTGGAGTTTTGTTGCTGAAGTTTTGCCAGTGCTTGCGCTGATTTTATTGGCCCTCTTGCTAAACAAGGCCATTACTAGAAGCTCTCCTGAGGGGATGTGGAAGTATATTATTATGGGAACCGGTTTAAGTTACATTCTGATAGCAGTGCATTGGGCATTAGAAAGTAACCTACTGGATCTGGCTTGGGTGCTTAAAGATGTTGGAAGCAATTGTATTCCTCGACTAGTATATGCCATCGGAGTTGGACAACTGTTATTAGTGGCAATTAATCAGCTTTTTATTAAACAGAAATCCTCAGAAGGCAGCAAAATCTTATCTACTAAAGCAGTAGCCATGTTTTCTGTATGGAGTTCAACAGTTATTATTCTGCTAGGAAAACAAGGACCTTTCATTGCGTTAGTATTCATAATTGGAGGTTATTGCATAATGCGGTTGGATAATGTAGAACTGGATGGCAAAGATGGAGGTAGTTGGAATTTGATGCTTGATCCAGTTCCTGTAACACAATGGAGCCTTTTTGCTGTGTGCCTTTTTTTCTGCACTGGCCACTGGTGTGCTTTTGATGGCCTCCGATATGGTGCTGCATTTACAGGCTTTGAGGAGTTCGTCCTGGTTCCCCAAGCAATCCTTCTTACAATGGATACTTATGGTTTTTCCCTCATCCTTCCAATATTTGGAATTCCATTTCTTGTTGCATGCCGGGGGCAGACTGAGAAAGGAAAGCAACCCATTCTCGGGCGGTTATCTCTGGTGTATATGATTTATGGACTCATTGTGGCCACTTCAGTTACAGCCACTATACTATGTGTCACAATTCATAGGCGGCATTTGATGGTATGGGGTTTATTTGCTCCTAAGTTTGTTTTTGATGTGGTGGGTCTTATCCTTACAGACGGTTTCATTTGTTTAGCCTCAGTTTACTATTTCAGTCGAGTGGAAGATCATGCCCTATACGATCCATTAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00563 ko01100 map00563 map01100

Pfam Domains

Protein Families

Phosphodiest

Protein Analysis

948

Amino Acids

105.05

Weight (kDa)

6.65

Isoelectric Point (pI)

39.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009386)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17250
fragaria_vesca	FvH4_4g21830 FvH4_4g21830 FvH4_4g21830
malus_domestica	MD13G1136600.v1.1 MD16G1131900.v1.1
prunus_persica	Prupe.1G208800_v2.0.a1 Prupe.1G208800_v2.0.a1 Prupe.1G208800_v2.0.a1 Prupe.1G208800_v2.0.a1
pyrus_communis	pycom13g11900 pycom16g11630
rosa_chinensis	RchiOBHm_Chr4g0428061
rosa_laevigata	RLG00000007185
rosa_multiflora	Rmu_sc0005263.1_g000004
rosa_roxburghii	Rroxscaffold_5G00369780
rosa_rugosa	Rorug04G0222100
rosa_samantha	Rh4AG279200 Rh4BG284600 Rh4CG300300 Rh4DG281700
rosa_wichuraiana	Rw4G024260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	196, 680, 1201
AccB7I	CCANNNNNTGG	2 cut(s)	1206, 2549
AciI	CCGC	4 cut(s)	1104, 2305, 2614, 2698
AclWI	GGATC	6 cut(s)	344, 350, 690, 2058, 2357, 2825
AcoI	YGGCCR	2 cut(s)	2419, 2652
AcsI	RAATTY	5 cut(s)	944, 1117, 1581, 2350, 2553
AcuI	CTGAAG	6 cut(s)	91, 900, 1230, 1848, 1911, 2643
AcyI	GRCGYC	1 cut(s)	222
AdeI	CACNNNGTG	1 cut(s)	28
AfaI	GTAC	4 cut(s)	253, 1191, 1198, 1477
AfeI	AGCGCT	2 cut(s)	173, 1038
AfiI	CCNNNNNNNGG	5 cut(s)	1206, 1875, 2549, 2609, 2610
AflII	CTTAAG	1 cut(s)	1382
AgeI	ACCGGT	2 cut(s)	398, 1994
AgsI	TTSAA	9 cut(s)	263, 292, 302, 343, 385, 458, 770, 1796, 2229
AhlI	ACTAGT	2 cut(s)	368, 2098
AjnI	CCWGG	2 cut(s)	306, 2484
AjuI	GAANNNNNNNTTGG	2 cut(s)	2487, 2519
AleI	CACNNNNGTG	1 cut(s)	2427
Alw21I	GWGCWC	3 cut(s)	24, 99, 445
Alw26I	GTCTC	2 cut(s)	884, 1381
Alw44I	GTGCAC	1 cut(s)	20
AlwI	GGATC	6 cut(s)	344, 350, 690, 2058, 2357, 2825
AlwNI	CAGNNNCTG	1 cut(s)	2372
Ama87I	CYCGRG	1 cut(s)	2609
Aor51HI	AGCGCT	2 cut(s)	173, 1038
AoxI	GGCC	5 cut(s)	1923, 1941, 2419, 2440, 2652
ApaLI	GTGCAC	1 cut(s)	20
ApeKI	GCWGC	9 cut(s)	174, 311, 376, 1022, 1039, 1359, 1632, 2178, 2456
ApoI	RAATTY	5 cut(s)	944, 1117, 1581, 2350, 2553
ArsI	GACNNNNNNTTYG	2 cut(s)	311, 343
AseI	ATTAAT	1 cut(s)	2142
AsiGI	ACCGGT	2 cut(s)	398, 1994
Asp700I	GAANNNNTTC	1 cut(s)	1649
AspLEI	GCGC	3 cut(s)	174, 1039, 1912
AspS9I	GGNCC	3 cut(s)	1440, 1924, 2258
AsuC2I	CCSGG	2 cut(s)	795, 2576
AsuHPI	GGTGA	8 cut(s)	40, 58, 76, 656, 845, 1630, 1765, 1858
AsuII	TTCGAA	1 cut(s)	1122
AvaI	CYCGRG	1 cut(s)	2609
AvaII	GGWCC	2 cut(s)	1440, 2258
AxyI	CCTNAGG	2 cut(s)	1099, 1962
BaeGI	GKGCMC	1 cut(s)	24
BalI	TGGCCA	2 cut(s)	2421, 2654
BanII	GRGCYC	1 cut(s)	99
BauI	CACGAG	1 cut(s)	806
BbsI	GAAGAC	2 cut(s)	208, 1131
Bbv12I	GWGCWC	3 cut(s)	24, 99, 445
BbvCI	CCTCAGC	1 cut(s)	1086
BbvI	GCAGC	9 cut(s)	161, 298, 388, 1026, 1034, 1346, 1644, 2190, 2443
BceAI	ACGGC	1 cut(s)	38
BcgI	CGANNNNNNTGC	2 cut(s)	1830, 1864
BciT130I	CCWGG	2 cut(s)	308, 2486
BciVI	GTATCC	1 cut(s)	2509
BclI	TGATCA	1 cut(s)	835
BcnI	CCSGG	2 cut(s)	795, 2576
BcoDI	GTCTC	2 cut(s)	884, 1381
BcuI	ACTAGT	2 cut(s)	368, 2098
BfaI	CTAG	7 cut(s)	369, 968, 1415, 1821, 1950, 2099, 2246
BfoI	RGCGCY	2 cut(s)	175, 1040
BfrI	CTTAAG	1 cut(s)	1382
BfuAI	ACCTGC	3 cut(s)	196, 680, 1201
BfuI	GTATCC	1 cut(s)	2509
BglII	AGATCT	1 cut(s)	586
BmcAI	AGTACT	1 cut(s)	253
Bme1390I	CCNGG	4 cut(s)	308, 795, 2486, 2576
Bme18I	GGWCC	2 cut(s)	1440, 2258
BmeT110I	CYCGRG	1 cut(s)	2609
BmgT120I	GGNCC	3 cut(s)	1440, 1924, 2258
BmiI	GGNNCC	4 cut(s)	1818, 1993, 2387, 2490
BmrFI	CCNGG	4 cut(s)	308, 795, 2486, 2576
BmrI	ACTGGG	1 cut(s)	34
BmsI	GCATC	8 cut(s)	24, 332, 599, 646, 1002, 1161, 1845, 2346
BmuI	ACTGGG	1 cut(s)	34
BpiI	GAAGAC	2 cut(s)	208, 1131
BplI	GAGNNNNNCTC	2 cut(s)	63, 95
BpmI	CTGGAG	4 cut(s)	199, 429, 797, 1590
Bpu10I	CCTNAGC	1 cut(s)	1086
Bpu14I	TTCGAA	1 cut(s)	1122
BpuMI	CCSGG	2 cut(s)	795, 2576
BsaAI	YACGTR	1 cut(s)	1625
BsaHI	GRCGYC	1 cut(s)	222
BsaJI	CCNNGG	3 cut(s)	275, 794, 2575
BsaWI	WCCGGW	3 cut(s)	228, 398, 1994
BsaXI	ACNNNNNCTCC	4 cut(s)	770, 800, 1301, 1331
Bsc4I	CCNNNNNNNGG	5 cut(s)	1206, 1875, 2549, 2609, 2610
Bse118I	RCCGGY	2 cut(s)	398, 1994
Bse21I	CCTNAGG	2 cut(s)	1099, 1962
Bse3DI	GCAATG	2 cut(s)	348, 2265
BseBI	CCWGG	2 cut(s)	308, 2486
BseDI	CCNNGG	3 cut(s)	275, 794, 2575
BseLI	CCNNNNNNNGG	5 cut(s)	1206, 1875, 2549, 2609, 2610
BseMI	GCAATG	2 cut(s)	348, 2265
BseMII	CTCAG	7 cut(s)	899, 1100, 1443, 1953, 2184, 2577, 2802
BseRI	GAGGAG	5 cut(s)	29, 71, 1322, 1412, 2489
BseSI	GKGCMC	1 cut(s)	24
BseXI	GCAGC	9 cut(s)	161, 298, 388, 1026, 1034, 1346, 1644, 2190, 2443
BsgI	GTGCAG	3 cut(s)	774, 1345, 2398
BshFI	GGCC	5 cut(s)	1925, 1943, 2421, 2442, 2654
BshTI	ACCGGT	2 cut(s)	398, 1994
BsiHKAI	GWGCWC	3 cut(s)	24, 99, 445
BsiHKCI	CYCGRG	1 cut(s)	2609
BsiSI	CCGG	5 cut(s)	229, 399, 794, 1995, 2575
BslFI	GGGAC	1 cut(s)	886
BslI	CCNNNNNNNGG	5 cut(s)	1206, 1875, 2549, 2609, 2610
BsmAI	GTCTC	2 cut(s)	884, 1381
BsmFI	GGGAC	1 cut(s)	886
BsnI	GGCC	5 cut(s)	1925, 1943, 2421, 2442, 2654
BsoBI	CYCGRG	1 cut(s)	2609
Bsp119I	TTCGAA	1 cut(s)	1122
Bsp1286I	GDGCHC	3 cut(s)	24, 99, 445
Bsp19I	CCATGG	1 cut(s)	275
BspACI	CCGC	4 cut(s)	1104, 2305, 2614, 2698
BspANI	GGCC	5 cut(s)	1925, 1943, 2421, 2442, 2654
BspCNI	CTCAG	7 cut(s)	900, 1099, 1444, 1954, 2183, 2578, 2801
BspHI	TCATGA	2 cut(s)	504, 1725
BspLI	GGNNCC	4 cut(s)	1818, 1993, 2387, 2490
BspMI	ACCTGC	3 cut(s)	196, 680, 1201
BspPI	GGATC	6 cut(s)	344, 350, 690, 2058, 2357, 2825
BspT104I	TTCGAA	1 cut(s)	1122
BspTI	CTTAAG	1 cut(s)	1382
BsrDI	GCAATG	2 cut(s)	348, 2265
BsrFI	RCCGGY	2 cut(s)	398, 1994
BssAI	RCCGGY	2 cut(s)	398, 1994
BssECI	CCNNGG	3 cut(s)	275, 794, 2575
BssNI	GRCGYC	1 cut(s)	222
BssSI	CACGAG	1 cut(s)	806
BssT1I	CCWWGG	1 cut(s)	275
Bst2BI	CACGAG	1 cut(s)	806
Bst2UI	CCWGG	2 cut(s)	308, 2486
Bst4CI	ACNGT	8 cut(s)	598, 751, 850, 1130, 1440, 2127, 2233, 2771
Bst6I	CTCTTC	1 cut(s)	876
BstACI	GRCGYC	1 cut(s)	222
BstAFI	CTTAAG	1 cut(s)	1382
BstAPI	GCANNNNNTGC	1 cut(s)	1424
BstBAI	YACGTR	1 cut(s)	1625
BstBI	TTCGAA	1 cut(s)	1122
BstC8I	GCNNGC	6 cut(s)	1377, 1630, 1678, 1815, 1908, 2572
BstDEI	CTNAG	9 cut(s)	908, 1086, 1099, 1452, 1962, 2170, 2586, 2730, 2788
BstDSI	CCRYGG	1 cut(s)	275
BstEII	GGTNACC	1 cut(s)	1771
BstH2I	RGCGCY	2 cut(s)	175, 1040
BstHHI	GCGC	3 cut(s)	174, 1039, 1912
BstMAI	GTCTC	2 cut(s)	884, 1381
BstMWI	GCNNNNNNNGC	5 cut(s)	180, 320, 329, 1424, 1433
BstNI	CCWGG	2 cut(s)	308, 2486
BstNSI	RCATGY	3 cut(s)	1632, 1680, 2574
BstPI	GGTNACC	1 cut(s)	1771
BstSCI	CCNGG	4 cut(s)	306, 793, 2484, 2574
BstSLI	GKGCMC	1 cut(s)	24
BstV1I	GCAGC	9 cut(s)	161, 298, 388, 1026, 1034, 1346, 1644, 2190, 2443
BstV2I	GAAGAC	2 cut(s)	208, 1131
BstX2I	RGATCY	3 cut(s)	336, 586, 2050
BstYI	RGATCY	3 cut(s)	336, 586, 2050
Bsu36I	CCTNAGG	2 cut(s)	1099, 1962
BsuI	GTATCC	1 cut(s)	2509
BsuRI	GGCC	5 cut(s)	1925, 1943, 2421, 2442, 2654
BtgI	CCRYGG	1 cut(s)	275
BtsI	GCAGTG	1 cut(s)	2025
BtsIMutI	CAGTG	7 cut(s)	22, 773, 1362, 1908, 2025, 2415, 2422
BveI	ACCTGC	3 cut(s)	196, 680, 1201
Cac8I	GCNNGC	6 cut(s)	1377, 1630, 1678, 1815, 1908, 2572
CaiI	CAGNNNCTG	1 cut(s)	2372
CciI	TCATGA	2 cut(s)	504, 1725
CfoI	GCGC	3 cut(s)	174, 1039, 1912
Cfr10I	RCCGGY	2 cut(s)	398, 1994
Cfr13I	GGNCC	3 cut(s)	1440, 1924, 2258
CseI	GACGC	2 cut(s)	230, 535
Csp6I	GTAC	4 cut(s)	252, 1190, 1197, 1476
CspAI	ACCGGT	2 cut(s)	398, 1994
CviQI	GTAC	4 cut(s)	252, 1190, 1197, 1476
DdeI	CTNAG	9 cut(s)	908, 1086, 1099, 1452, 1962, 2170, 2586, 2730, 2788
DraI	TTTAAA	1 cut(s)	1464
DraIII	CACNNNGTG	1 cut(s)	28
EaeI	YGGCCR	2 cut(s)	2419, 2652
Eam1104I	CTCTTC	1 cut(s)	876
EarI	CTCTTC	1 cut(s)	876
Ecl136II	GAGCTC	1 cut(s)	97
Eco130I	CCWWGG	1 cut(s)	275
Eco24I	GRGCYC	1 cut(s)	99
Eco32I	GATATC	2 cut(s)	1032, 1500
Eco47I	GGWCC	2 cut(s)	1440, 2258
Eco47III	AGCGCT	2 cut(s)	173, 1038
Eco53kI	GAGCTC	1 cut(s)	97
Eco57I	CTGAAG	6 cut(s)	91, 900, 1230, 1848, 1911, 2643
Eco81I	CCTNAGG	2 cut(s)	1099, 1962
Eco88I	CYCGRG	1 cut(s)	2609
Eco91I	GGTNACC	1 cut(s)	1771
EcoICRI	GAGCTC	1 cut(s)	97
EcoO109I	RGGNCCY	1 cut(s)	2258
EcoO65I	GGTNACC	1 cut(s)	1771
EcoRI	GAATTC	1 cut(s)	2553
EcoRII	CCWGG	2 cut(s)	306, 2484
EcoRV	GATATC	2 cut(s)	1032, 1500
EcoT14I	CCWWGG	1 cut(s)	275
EcoT22I	ATGCAT	2 cut(s)	325, 614
EcoT38I	GRGCYC	1 cut(s)	99
ErhI	CCWWGG	1 cut(s)	275
FalI	AAGNNNNNCTT	2 cut(s)	2487, 2519
FaqI	GGGAC	1 cut(s)	886
FbaI	TGATCA	1 cut(s)	835
FriOI	GRGCYC	1 cut(s)	99
FspBI	CTAG	7 cut(s)	369, 968, 1415, 1821, 1950, 2099, 2246
GlaI	GCGC	3 cut(s)	173, 1038, 1911
GsuI	CTGGAG	4 cut(s)	199, 429, 797, 1590
HaeII	RGCGCY	2 cut(s)	175, 1040
HaeIII	GGCC	5 cut(s)	1925, 1943, 2421, 2442, 2654
HapII	CCGG	5 cut(s)	229, 399, 794, 1995, 2575
HgaI	GACGC	2 cut(s)	230, 535
HhaI	GCGC	3 cut(s)	174, 1039, 1912
Hin1I	GRCGYC	1 cut(s)	222
Hin6I	GCGC	3 cut(s)	172, 1037, 1910
HinP1I	GCGC	3 cut(s)	172, 1037, 1910
HindIII	AAGCTT	2 cut(s)	293, 555
HinfI	GANTC	6 cut(s)	710, 919, 1147, 1574, 1863, 2643
HpaII	CCGG	5 cut(s)	229, 399, 794, 1995, 2575
HphI	GGTGA	8 cut(s)	40, 58, 76, 656, 845, 1630, 1765, 1858
Hpy166II	GTNNAC	5 cut(s)	22, 404, 601, 965, 2794
Hpy188I	TCNGA	9 cut(s)	168, 336, 552, 909, 1828, 2013, 2114, 2173, 2447
Hpy188III	TCNNGA	9 cut(s)	263, 302, 505, 590, 1569, 1578, 1642, 1726, 1961
Hpy8I	GTNNAC	5 cut(s)	22, 404, 601, 965, 2794
Hpy99I	CGWCG	6 cut(s)	53, 122, 125, 224, 331, 1030
HpyAV	CCTTC	8 cut(s)	379, 632, 1531, 1658, 1857, 2168, 2513, 2549
HpyCH4III	ACNGT	8 cut(s)	598, 751, 850, 1130, 1440, 2127, 2233, 2771
HpyCH4IV	ACGT	2 cut(s)	123, 1624
HpyF10VI	GCNNNNNNNGC	5 cut(s)	180, 320, 329, 1424, 1433
HpyF3I	CTNAG	9 cut(s)	908, 1086, 1099, 1452, 1962, 2170, 2586, 2730, 2788
HpySE526I	ACGT	2 cut(s)	123, 1624
Hsp92I	GRCGYC	1 cut(s)	222
HspAI	GCGC	3 cut(s)	172, 1037, 1910
Ksp22I	TGATCA	1 cut(s)	835
Lsp1109I	GCAGC	9 cut(s)	161, 298, 388, 1026, 1034, 1346, 1644, 2190, 2443
LweI	GCATC	8 cut(s)	24, 332, 599, 646, 1002, 1161, 1845, 2346
MaeI	CTAG	7 cut(s)	369, 968, 1415, 1821, 1950, 2099, 2246
MaeII	ACGT	2 cut(s)	123, 1624
MfeI	CAATTG	1 cut(s)	2083
MflI	RGATCY	3 cut(s)	336, 586, 2050
MhlI	GDGCHC	3 cut(s)	24, 99, 445
MlsI	TGGCCA	2 cut(s)	2421, 2654
MluNI	TGGCCA	2 cut(s)	2421, 2654
MlyI	GAGTC	1 cut(s)	2637
MmeI	TCCRAC	7 cut(s)	714, 1030, 1234, 2056, 2098, 2289, 2327
Mox20I	TGGCCA	2 cut(s)	2421, 2654
Mph1103I	ATGCAT	2 cut(s)	325, 614
MroXI	GAANNNNTTC	1 cut(s)	1649
MscI	TGGCCA	2 cut(s)	2421, 2654
MslI	CAYNNNNRTG	2 cut(s)	642, 2427
Msp20I	TGGCCA	2 cut(s)	2421, 2654
MspCI	CTTAAG	1 cut(s)	1382
MspI	CCGG	5 cut(s)	229, 399, 794, 1995, 2575
MspR9I	CCNGG	4 cut(s)	308, 795, 2486, 2576
MunI	CAATTG	1 cut(s)	2083
MvaI	CCWGG	2 cut(s)	308, 2486
MwoI	GCNNNNNNNGC	5 cut(s)	180, 320, 329, 1424, 1433
NciI	CCSGG	2 cut(s)	795, 2576
NcoI	CCATGG	1 cut(s)	275
NlaIV	GGNNCC	4 cut(s)	1818, 1993, 2387, 2490
NmuCI	GTSAC	5 cut(s)	692, 1317, 1341, 1771, 2683
NsiI	ATGCAT	2 cut(s)	325, 614
NspI	RCATGY	3 cut(s)	1632, 1680, 2574
NspV	TTCGAA	1 cut(s)	1122
OliI	CACNNNNGTG	1 cut(s)	2427
PaeI	GCATGC	3 cut(s)	1632, 1680, 2574
PagI	TCATGA	2 cut(s)	504, 1725
PcsI	WCGNNNNNNNCGW	1 cut(s)	210
PdmI	GAANNNNTTC	1 cut(s)	1649
PfeI	GAWTC	5 cut(s)	710, 919, 1147, 1574, 1863
PflMI	CCANNNNNTGG	2 cut(s)	1206, 2549
PinAI	ACCGGT	2 cut(s)	398, 1994
PleI	GAGTC	1 cut(s)	2637
PpsI	GAGTC	1 cut(s)	2637
Ppu21I	YACGTR	1 cut(s)	1625
PpuMI	RGGWCCY	1 cut(s)	2258
PshBI	ATTAAT	1 cut(s)	2142
Psp124BI	GAGCTC	1 cut(s)	99
Psp5II	RGGWCCY	1 cut(s)	2258
Psp6I	CCWGG	2 cut(s)	306, 2484
PspEI	GGTNACC	1 cut(s)	1771
PspGI	CCWGG	2 cut(s)	306, 2484
PspN4I	GGNNCC	4 cut(s)	1818, 1993, 2387, 2490
PspPI	GGNCC	3 cut(s)	1440, 1924, 2258
PspPPI	RGGWCCY	1 cut(s)	2258
PstNI	CAGNNNCTG	1 cut(s)	2372
PsuI	RGATCY	3 cut(s)	336, 586, 2050
RsaI	GTAC	4 cut(s)	253, 1191, 1198, 1477
RsaNI	GTAC	4 cut(s)	252, 1190, 1197, 1476
RseI	CAYNNNNRTG	2 cut(s)	642, 2427
SacI	GAGCTC	1 cut(s)	99
Sau96I	GGNCC	3 cut(s)	1440, 1924, 2258
ScaI	AGTACT	1 cut(s)	253
SchI	GAGTC	1 cut(s)	2637
ScrFI	CCNGG	4 cut(s)	308, 795, 2486, 2576
SduI	GDGCHC	3 cut(s)	24, 99, 445
SfaNI	GCATC	8 cut(s)	24, 332, 599, 646, 1002, 1161, 1845, 2346
SfuI	TTCGAA	1 cut(s)	1122
SinI	GGWCC	2 cut(s)	1440, 2258
SmiMI	CAYNNNNRTG	2 cut(s)	642, 2427
SmlI	CTYRAG	1 cut(s)	1382
SmoI	CTYRAG	1 cut(s)	1382
SpeI	ACTAGT	2 cut(s)	368, 2098
SphI	GCATGC	3 cut(s)	1632, 1680, 2574
SsiI	CCGC	4 cut(s)	1104, 2305, 2614, 2698
SspI	AATATT	1 cut(s)	2547
SspMI	CTAG	7 cut(s)	369, 968, 1415, 1821, 1950, 2099, 2246
SstI	GAGCTC	1 cut(s)	99
StyD4I	CCNGG	4 cut(s)	306, 793, 2484, 2574
StyI	CCWWGG	1 cut(s)	275
TaaI	ACNGT	8 cut(s)	598, 751, 850, 1130, 1440, 2127, 2233, 2771
TaiI	ACGT	2 cut(s)	126, 1627
TaqI	TCGA	6 cut(s)	219, 640, 1122, 1643, 2095, 2806
TatI	WGTACW	2 cut(s)	251, 1189
TauI	GCSGC	1 cut(s)	2701
TfiI	GAWTC	5 cut(s)	710, 919, 1147, 1574, 1863
TscAI	CASTG	7 cut(s)	29, 780, 1369, 1908, 2025, 2422, 2429
TseFI	GTSAC	5 cut(s)	692, 1317, 1341, 1771, 2683
TseI	GCWGC	9 cut(s)	174, 311, 376, 1022, 1039, 1359, 1632, 2178, 2456
Tsp45I	GTSAC	5 cut(s)	692, 1317, 1341, 1771, 2683
TspGWI	ACGGA	2 cut(s)	621, 991
TspRI	CASTG	7 cut(s)	29, 780, 1369, 1908, 2025, 2422, 2429
Van91I	CCANNNNNTGG	2 cut(s)	1206, 2549
Vha464I	CTTAAG	1 cut(s)	1382
VneI	GTGCAC	1 cut(s)	20
VpaK11BI	GGWCC	2 cut(s)	1440, 2258
VspI	ATTAAT	1 cut(s)	2142
XapI	RAATTY	5 cut(s)	944, 1117, 1581, 2350, 2553
XceI	RCATGY	3 cut(s)	1632, 1680, 2574
XmnI	GAANNNNTTC	1 cut(s)	1649
XspI	CTAG	7 cut(s)	369, 968, 1415, 1821, 1950, 2099, 2246
ZrmI	AGTACT	1 cut(s)	253
Zsp2I	ATGCAT	2 cut(s)	325, 614

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.