Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010643

Physical Location & Seq

Genomic Coordinates Reverse (-)

5736630 .. 5741500

Gene Structure 4871 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G17420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3081 bp

ATGGAAGCTAGCGCCGGTCTTGTCGCCGGTTCTCATAACCGTAATGAACTAGTCGTCATTCACAACCATGAAGAGCCAAAGCCTCTGAAGAATCTAGATGGACAATTCTGTGAGATATGTGGAGATCAGATTGGTTTAACAGTAGAAGGAGACCTCTTCGTAGCTTGCAATGAGTGTGGTTTTCCGGCGTGTAGACCTTGCTATGAGTACGAGAGAAGAGAAGGAACACAAAACTGTCCTCAGTGTAAGACTCGTTACAAGCGTCTCAGAGGAAGCCCAAGAGTGGAGGGAGATGAAGACGAAGAAGATATTGATGATATTGAGTATGAATTTAATATCGAACATGAACAAGATAAGCATAAGCATTCTGCTGAGGCTATGCTTTATGGGAAAATGAGCTATGGAAGAGGTCCTGAGGATGATGAGAATGGGAGATTCCCACCTGTTATAGCTGGTGGTCATAGTGGAGAATTTCCAGTTGGAGGAGGTTATGGTAATGGAGAACATGGGCTTCATAAGCGTGTGCACCCATATCCATCATCTGAAGCTGGGAGTGAGGGAGGATGGCGGGAAAGAATGGATGACTGGAAGCTCCAGCATGGAAATCTTGGGCCAGAACCAGATGATGATCCTGAGATGGGACTGATCGACGAGGCACGGCAGCCACTCTCGCGGAAAGTTCCCATTGCCTCAAGCAAGATCAATCCATATCGGATGGTCATCGTCGCTAGGCTTGTGATTCTAGCAGTTTTTCTGCGGTATAGGCTCTTGAATCCAGTGCATGATGCTCTGGGATTATGGCTGACCTCTGTGATCTGTGAAATCTGGTTCGCTGTCTCTTGGATTCTTGATCAGTTCCCCAAGTGGTTCCCTATTGAACGTGAGACCTATCTAGATCGGCTTTCCCTCAGGTACGAGAGAGAAGGTGAACCAAATATGCTTGCCCCTGTAGATGTCTTTGTCAGTACGGTGGACCCATTGAAGGAGCCTCCCCTCGTCACATCCAACACTGTGCTGTCAATCTTGGCCATGGACTACCCAGTTGAGAAAATCTCCTGCTATGTCTCTGACGACGGTGCTTCAATGCTTACATTCGAATCTCTCTCGGAAACTGCTGAGTTTGCAAGAAAATGGGTTCCCTTCTGTAAGAAATTCTCCATAGAGCCACGGGCACCGGAGATGTACTTCACGTTGAAAGTTGATTATCTCCAGGACAAAGTCCACCCAACATTTGTTAAGGAACGTCGAGCCATGAAGAGAGAATATGAGGAGTTCAAGGTCAGGATCAACGCTCAAGTGGCGAAGGCCTCAAAGGTTCCTCTAGAAGGTTGGATCATGCAAGATGGAACACCGTGGCCAGGGAACAACACCAAGGACCACCCCGGTATGATCCAAGTCTTCCTCGGCCACAGCGGAGGATTTGATGTCGAAGGGCATGAGCTTCCTCGGCTTGTGTACGTGTCCCGTGAGAAGCGTCCTGGTTTTCAACACCACAAGAAAGCTGGCGCCATGAATGCCCTGGTTCGAGTGGCAGGCGTACTCACAAATGCTCCTTTCATGCTGAACTTGGACTGTGATCACTATGTAAACAACAGCAAGGCCGTGAGGGAAGCAATGTGTTTTTTGATGGATCCTCAGATTGGAAAGAAGGTCTGCTATGTTCAGTTCCCTCAAAGGTTTGATGGCATTGACACAAACGATCGTTACGCCAACAGAAACACAGTCTTCTTTGATATCAATATGAAAGGTCTAGATGGAATCCAAGGTCCAGTTTACGTTGGTACTGGTTGTGTTTTCAAACGACAAGCTCTGTATGGTTATGAACCACCAAAGGGTCCTAAACGTCCAAAGATGATAAGCTGTGGTTGTTGTCCTTGCTTTGGGCGCCGGAGAAAGAATAAGAAATTTTCCAAGAATGACATGAATGGTGACGTAGCAGCCCTTGGAGGAGCAGAAGGTGATAAGGAGCATTTGATGTCTGAAATGAACTTTGAGAAAACATTTGGGCAATCATCCATCTTTGTAACCTCAACTTTGATGGAAGAAGGTGGTGTTCCTCCGTCATCAAGTCCTGCAGTGCTCCTTAAAGAGGCAATCCATGTCATAAGCTGCGGTTATGAAGACAAGACTGAGTGGGGAACTGAGCTGGGTTGGATCTATGGCTCTATCACAGAGGATATTTTGACGGGATTCAAGATGCATTGCCGTGGATGGAGGTCTATTTACTGCATGCCTAAGAGGCCTGCATTCAAAGGTTCAGCTCCTATTAATCTATCAGACAGGTTAAACCAGGTTTTGCGTTGGGCACTTGGATCGGTTGAGATATTTTTCAGCCGGCACAGTCCTCTCTGGTATGGCTACAAAGGAGGCAAACTCAAGTGGCTTGAGCGTTTTGCTTATGCCAACACAACAATCTACCCCTTCACATCTATACCACTTCTTGCCTACTGTATCCTTCCAGCCATCTGTCTCCTTACTGACAAATTCATCATGCCACCGATAAGCACATTTGCTAGTCTCTTCTTCATCTCACTGTTTATGTCGATCATTGTAACGGGAATCTTGGAATTGAGATGGAGCGGAGTTAGCATTGAGGAATGGTGGAGAAACGAGCAATTCTGGGTCATTGGAGGAATCTCAGCTCATCTCTTTGCGGTTGTCCAAGGTCTCCTCAAAATCTTAGCAGGCATTGACACAAACTTCACCGTCACATCAAAGGCAACAGATGATGATGACTTTGGAGAACTTTACGCATTCAAATGGACAACACTGCTGATCCCTCCAACAACTGTCTTAATCATAAACATTGTTGGCGTTGTTGCAGGCATCTCAGATGCCATTAACAATGGATATCAGTCTTGGGGACCTCTATTTGGTAAACTCTTCTTCTCCTTTTGGGTCATTGTTCATCTCTACCCATTCCTCAAAGGTCTGATGGGTAGACAGAACAGAACACCAACCATTGTGGTGATTTGGTCAGTGTTATTGGCATCTATCTTCTCTTTGCTTTGGGTAAGAATTGATCCTTTTGTGCTCAAGACCAAAGGACCTGACACTTCCAAGTGTGGCATCAACTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009507 GO:0009536 GO:0009664 GO:0009832 GO:0009833 GO:0009834 GO:0009987 GO:0010330 GO:0010393 GO:0010395 GO:0010400 GO:0012505 GO:0016020 GO:0016043 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0017144 GO:0022402 GO:0030243 GO:0030244 GO:0032991 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0045488 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0052546 GO:0061640 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1902494 GO:1903047 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

1026

Amino Acids

115.8

Weight (kDa)

6.25

Isoelectric Point (pI)

41.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	27 - 103	2.1e-40	Zinc-binding RING-finger
Cellulose_synt	PF03552	317 - 1019	0.0	Cellulose synthase
Glyco_trans_2_3	PF13632	714 - 823	2.4e-06	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17420
fragaria_vesca	FvH4_1g00670
malus_domestica	MD02G1005600.v1.1 MD15G1150200.v1.1 MD15G1150300.v1.1
prunus_persica	Prupe.7G265400_v2.0.a1
pyrus_communis	pycom02g00450 pycom15g13420 pycom15g13430 pycom15g13440
rosa_chinensis	RchiOBHm_Chr2g0085301 RchiOBHm_Chr2g0175181
rosa_laevigata	RLG00000015676
rosa_multiflora	Rmu_sc0008510.1_g000012
rosa_rugosa	Rorug01G0459400
rosa_samantha	Rh2AG007700 Rh2BG008400 Rh2CG009100 Rh2DG009600
rosa_wichuraiana	Rw2G000740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	1171, 1505, 1884
AccBSI	CCGCTC	1 cut(s)	2580
AccI	GTMKAC	2 cut(s)	193, 2941
AccII	CGCG	1 cut(s)	673
AciI	CCGC	7 cut(s)	568, 673, 757, 1413, 2112, 2580, 2654
AcoI	YGGCCR	3 cut(s)	1026, 1355, 1405
AcsI	RAATTY	5 cut(s)	329, 470, 1151, 1904, 2483
AcuI	CTGAAG	2 cut(s)	107, 564
AcyI	GRCGYC	2 cut(s)	1506, 1885
AfaI	GTAC	7 cut(s)	209, 914, 967, 1184, 1457, 1539, 1783
AflIII	ACRYGT	1 cut(s)	1458
AhlI	ACTAGT	1 cut(s)	49
AjnI	CCWGG	5 cut(s)	1209, 1357, 1477, 1518, 2289
AjuI	GAANNNNNNNTTGG	2 cut(s)	462, 494
Alw21I	GWGCWC	3 cut(s)	528, 2082, 3036
Alw26I	GTCTC	8 cut(s)	144, 269, 841, 878, 1069, 2474, 2522, 2672
Alw44I	GTGCAC	1 cut(s)	524
AoxI	GGCC	7 cut(s)	611, 1026, 1305, 1355, 1405, 1599, 2240
ApaLI	GTGCAC	1 cut(s)	524
ApeKI	GCWGC	3 cut(s)	661, 1937, 2109
ApoI	RAATTY	5 cut(s)	329, 470, 1151, 1904, 2483
AseI	ATTAAT	1 cut(s)	2268
AspLEI	GCGC	3 cut(s)	14, 1508, 1887
AspS9I	GGNCC	8 cut(s)	410, 611, 973, 1375, 1766, 1835, 2864, 3047
AsuC2I	CCSGG	1 cut(s)	1383
AsuHPI	GGTGA	5 cut(s)	938, 1940, 1970, 2695, 2980
AsuII	TTCGAA	1 cut(s)	1095
AsuNHI	GCTAGC	1 cut(s)	8
AvaII	GGWCC	7 cut(s)	410, 973, 1375, 1766, 1835, 2864, 3047
AxyI	CCTNAGG	2 cut(s)	414, 908
BaeGI	GKGCMC	3 cut(s)	528, 1174, 2308
BalI	TGGCCA	2 cut(s)	1028, 1357
BamHI	GGATCC	1 cut(s)	1630
BanI	GGYRCC	3 cut(s)	1171, 1505, 1884
BbsI	GAAGAC	4 cut(s)	303, 1390, 1717, 2127
Bbv12I	GWGCWC	3 cut(s)	528, 2082, 3036
BbvCI	CCTCAGC	1 cut(s)	372
BbvI	GCAGC	3 cut(s)	673, 1949, 2096
BceAI	ACGGC	3 cut(s)	674, 1586, 2190
BcgI	CGANNNNNNTGC	2 cut(s)	2295, 2329
BciT130I	CCWGG	5 cut(s)	1211, 1359, 1479, 1520, 2291
BciVI	GTATCC	1 cut(s)	2462
BclI	TGATCA	2 cut(s)	850, 1576
BcnI	CCSGG	1 cut(s)	1383
BcoDI	GTCTC	8 cut(s)	144, 269, 841, 878, 1069, 2474, 2522, 2672
BcuI	ACTAGT	1 cut(s)	49
BfaI	CTAG	9 cut(s)	9, 50, 95, 729, 743, 893, 1322, 1751, 2514
BfmI	CTRYAG	2 cut(s)	948, 2073
BfoI	RGCGCY	3 cut(s)	15, 1509, 1888
BfuI	GTATCC	1 cut(s)	2462
BglI	GCCNNNNNGGC	1 cut(s)	2239
BisI	GCNGC	3 cut(s)	662, 1938, 2110
BlsI	GCNGC	3 cut(s)	663, 1939, 2111
Bme1390I	CCNGG	6 cut(s)	1211, 1359, 1383, 1479, 1520, 2291
Bme18I	GGWCC	7 cut(s)	410, 973, 1375, 1766, 1835, 2864, 3047
BmgT120I	GGNCC	8 cut(s)	410, 611, 973, 1375, 1766, 1835, 2864, 3047
BmrFI	CCNGG	6 cut(s)	1211, 1359, 1383, 1479, 1520, 2291
BmrI	ACTGGG	1 cut(s)	1034
BmsI	GCATC	5 cut(s)	775, 2187, 2824, 2835, 2999
BmtI	GCTAGC	1 cut(s)	12
BmuI	ACTGGG	1 cut(s)	1034
BpiI	GAAGAC	4 cut(s)	303, 1390, 1717, 2127
BplI	GAGNNNNNCTC	4 cut(s)	1037, 1069, 2358, 2390
BpmI	CTGGAG	2 cut(s)	578, 1193
Bpu10I	CCTNAGC	1 cut(s)	372
Bpu14I	TTCGAA	1 cut(s)	1095
BpuEI	CTTGAG	5 cut(s)	676, 1278, 2360, 2405, 3020
BpuMI	CCSGG	1 cut(s)	1383
BsaAI	YACGTR	1 cut(s)	1459
BsaBI	GATNNNNATC	2 cut(s)	627, 719
BsaHI	GRCGYC	2 cut(s)	1506, 1885
BsaI	GGTCTC	3 cut(s)	144, 878, 2672
BsaWI	WCCGGW	1 cut(s)	1174
BsaXI	ACNNNNNCTCC	2 cut(s)	1534, 1564
Bse118I	RCCGGY	3 cut(s)	14, 26, 2334
Bse1I	ACTGG	6 cut(s)	476, 590, 776, 1040, 1769, 1789
Bse21I	CCTNAGG	2 cut(s)	414, 908
Bse3DI	GCAATG	4 cut(s)	175, 684, 1620, 2200
Bse8I	GATNNNNATC	2 cut(s)	627, 719
BseBI	CCWGG	5 cut(s)	1211, 1359, 1479, 1520, 2291
BseGI	GGATG	7 cut(s)	424, 569, 586, 720, 1001, 2012, 2216
BseJI	GATNNNNATC	2 cut(s)	627, 719
BseMI	GCAATG	4 cut(s)	175, 684, 1620, 2200
BseNI	ACTGG	6 cut(s)	476, 590, 776, 1040, 1769, 1789
BseRI	GAGGAG	4 cut(s)	498, 1283, 1962, 2660
BseSI	GKGCMC	3 cut(s)	528, 1174, 2308
BseXI	GCAGC	3 cut(s)	673, 1949, 2096
BseYI	CCCAGC	2 cut(s)	548, 2146
Bsh1236I	CGCG	1 cut(s)	673
Bsh1285I	CGRYCG	1 cut(s)	1702
BshFI	GGCC	7 cut(s)	613, 1028, 1307, 1357, 1407, 1601, 2242
BshNI	GGYRCC	3 cut(s)	1171, 1505, 1884
BsiEI	CGRYCG	1 cut(s)	1702
BsiHKAI	GWGCWC	3 cut(s)	528, 2082, 3036
BsiSI	CCGG	7 cut(s)	15, 27, 185, 1175, 1383, 1888, 2335
BslFI	GGGAC	3 cut(s)	654, 1447, 2877
BsmAI	GTCTC	8 cut(s)	144, 269, 841, 878, 1069, 2474, 2522, 2672
BsmBI	CGTCTC	1 cut(s)	269
BsmFI	GGGAC	3 cut(s)	654, 1447, 2877
BsmI	GAATGC	4 cut(s)	364, 1519, 2246, 2753
BsnI	GGCC	7 cut(s)	613, 1028, 1307, 1357, 1407, 1601, 2242
Bso31I	GGTCTC	3 cut(s)	144, 878, 2672
Bsp119I	TTCGAA	1 cut(s)	1095
Bsp1286I	GDGCHC	5 cut(s)	528, 1174, 2082, 2308, 3036
Bsp19I	CCATGG	1 cut(s)	1029
BspACI	CCGC	7 cut(s)	568, 673, 757, 1413, 2112, 2580, 2654
BspANI	GGCC	7 cut(s)	613, 1028, 1307, 1357, 1407, 1601, 2242
BspFNI	CGCG	1 cut(s)	673
BspMAI	CTGCAG	1 cut(s)	2077
BspOI	GCTAGC	1 cut(s)	12
BspQI	GCTCTTC	1 cut(s)	66
BspT104I	TTCGAA	1 cut(s)	1095
BspT107I	GGYRCC	3 cut(s)	1171, 1505, 1884
BspTNI	GGTCTC	3 cut(s)	144, 878, 2672
BsrBI	CCGCTC	1 cut(s)	2580
BsrDI	GCAATG	4 cut(s)	175, 684, 1620, 2200
BsrFI	RCCGGY	3 cut(s)	14, 26, 2334
BsrI	ACTGG	6 cut(s)	476, 590, 776, 1040, 1769, 1789
BssAI	RCCGGY	3 cut(s)	14, 26, 2334
BssNI	GRCGYC	2 cut(s)	1506, 1885
BssT1I	CCWWGG	5 cut(s)	1029, 1371, 1762, 1942, 2662
Bst2UI	CCWGG	5 cut(s)	1211, 1359, 1479, 1520, 2291
Bst6I	CTCTTC	7 cut(s)	66, 161, 211, 400, 1250, 2525, 2888
BstACI	GRCGYC	2 cut(s)	1506, 1885
BstAPI	GCANNNNNTGC	1 cut(s)	3075
BstBAI	YACGTR	1 cut(s)	1459
BstBI	TTCGAA	1 cut(s)	1095
BstDSI	CCRYGG	4 cut(s)	1029, 1166, 1352, 2206
BstENI	CCTNNNNNAGG	2 cut(s)	1323, 2087
BstF5I	GGATG	7 cut(s)	424, 569, 586, 720, 1001, 2012, 2216
BstFNI	CGCG	1 cut(s)	673
BstH2I	RGCGCY	3 cut(s)	15, 1509, 1888
BstHHI	GCGC	3 cut(s)	14, 1508, 1887
BstMAI	GTCTC	8 cut(s)	144, 269, 841, 878, 1069, 2474, 2522, 2672
BstMCI	CGRYCG	1 cut(s)	1702
BstNI	CCWGG	5 cut(s)	1211, 1359, 1479, 1520, 2291
BstNSI	RCATGY	1 cut(s)	2233
BstSCI	CCNGG	6 cut(s)	1209, 1357, 1381, 1477, 1518, 2289
BstSFI	CTRYAG	2 cut(s)	948, 2073
BstSLI	GKGCMC	3 cut(s)	528, 1174, 2308
BstUI	CGCG	1 cut(s)	673
BstV1I	GCAGC	3 cut(s)	673, 1949, 2096
BstV2I	GAAGAC	4 cut(s)	303, 1390, 1717, 2127
BstX2I	RGATCY	2 cut(s)	1630, 2154
BstYI	RGATCY	2 cut(s)	1630, 2154
Bsu36I	CCTNAGG	2 cut(s)	414, 908
BsuI	GTATCC	1 cut(s)	2462
BsuRI	GGCC	7 cut(s)	613, 1028, 1307, 1357, 1407, 1601, 2242
BtgI	CCRYGG	4 cut(s)	1029, 1166, 1352, 2206
BtsCI	GGATG	7 cut(s)	424, 569, 586, 720, 1001, 2012, 2216
BtsI	GCAGTG	2 cut(s)	2082, 2768
BtsIMutI	CAGTG	7 cut(s)	248, 783, 1008, 2082, 2531, 2768, 2985
CfoI	GCGC	3 cut(s)	14, 1508, 1887
Cfr10I	RCCGGY	3 cut(s)	14, 26, 2334
Cfr13I	GGNCC	8 cut(s)	410, 611, 973, 1375, 1766, 1835, 2864, 3047
CseI	GACGC	2 cut(s)	251, 1463
CsiI	ACCWGGT	1 cut(s)	2289
Csp6I	GTAC	7 cut(s)	208, 913, 966, 1183, 1456, 1538, 1782
CspCI	CAANNNNNGTGG	4 cut(s)	157, 192, 2946, 2981
CviQI	GTAC	7 cut(s)	208, 913, 966, 1183, 1456, 1538, 1782
DinI	GGCGCC	2 cut(s)	1507, 1886
EaeI	YGGCCR	3 cut(s)	1026, 1355, 1405
Eam1104I	CTCTTC	7 cut(s)	66, 161, 211, 400, 1250, 2525, 2888
EarI	CTCTTC	7 cut(s)	66, 161, 211, 400, 1250, 2525, 2888
Eco130I	CCWWGG	5 cut(s)	1029, 1371, 1762, 1942, 2662
Eco147I	AGGCCT	2 cut(s)	1307, 2242
Eco31I	GGTCTC	3 cut(s)	144, 878, 2672
Eco32I	GATATC	2 cut(s)	1735, 2852
Eco47I	GGWCC	7 cut(s)	410, 973, 1375, 1766, 1835, 2864, 3047
Eco57I	CTGAAG	2 cut(s)	107, 564
Eco81I	CCTNAGG	2 cut(s)	414, 908
EcoNI	CCTNNNNNAGG	2 cut(s)	1323, 2087
EcoO109I	RGGNCCY	4 cut(s)	410, 1835, 2864, 3047
EcoRII	CCWGG	5 cut(s)	1209, 1357, 1477, 1518, 2289
EcoRV	GATATC	2 cut(s)	1735, 2852
EcoT14I	CCWWGG	5 cut(s)	1029, 1371, 1762, 1942, 2662
EcoT22I	ATGCAT	1 cut(s)	2202
EgeI	GGCGCC	2 cut(s)	1507, 1886
EheI	GGCGCC	2 cut(s)	1507, 1886
ErhI	CCWWGG	5 cut(s)	1029, 1371, 1762, 1942, 2662
Esp3I	CGTCTC	1 cut(s)	269
FaqI	GGGAC	3 cut(s)	654, 1447, 2877
FauI	CCCGC	1 cut(s)	561
FbaI	TGATCA	2 cut(s)	850, 1576
FblI	GTMKAC	2 cut(s)	193, 2941
Fnu4HI	GCNGC	3 cut(s)	662, 1938, 2110
FokI	GGATG	7 cut(s)	431, 576, 593, 727, 988, 1999, 2223
Fsp4HI	GCNGC	3 cut(s)	662, 1938, 2110
FspBI	CTAG	9 cut(s)	9, 50, 95, 729, 743, 893, 1322, 1751, 2514
GlaI	GCGC	3 cut(s)	13, 1507, 1886
GluI	GCNGC	3 cut(s)	662, 1938, 2110
GsaI	CCCAGC	2 cut(s)	552, 2150
GsuI	CTGGAG	2 cut(s)	578, 1193
HaeII	RGCGCY	3 cut(s)	15, 1509, 1888
HaeIII	GGCC	7 cut(s)	613, 1028, 1307, 1357, 1407, 1601, 2242
HapII	CCGG	7 cut(s)	15, 27, 185, 1175, 1383, 1888, 2335
HgaI	GACGC	2 cut(s)	251, 1463
HhaI	GCGC	3 cut(s)	14, 1508, 1887
Hin1I	GRCGYC	2 cut(s)	1506, 1885
Hin6I	GCGC	3 cut(s)	12, 1506, 1885
HinP1I	GCGC	3 cut(s)	12, 1506, 1885
HpaII	CCGG	7 cut(s)	15, 27, 185, 1175, 1383, 1888, 2335
HphI	GGTGA	5 cut(s)	938, 1940, 1970, 2695, 2980
Hpy99I	CGWCG	4 cut(s)	653, 728, 1076, 1248
HpyCH4IV	ACGT	7 cut(s)	880, 1190, 1243, 1458, 1776, 1843, 1932
HpySE526I	ACGT	7 cut(s)	880, 1190, 1243, 1458, 1776, 1843, 1932
Hsp92I	GRCGYC	2 cut(s)	1506, 1885
HspAI	GCGC	3 cut(s)	12, 1506, 1885
KasI	GGCGCC	2 cut(s)	1505, 1884
KroI	GCCGGC	1 cut(s)	2334
KroNI	GCCGGC	1 cut(s)	2336
Ksp22I	TGATCA	2 cut(s)	850, 1576
LguI	GCTCTTC	1 cut(s)	66
LmnI	GCTCC	8 cut(s)	597, 985, 1555, 1949, 1966, 2085, 2266, 2577
Lsp1109I	GCAGC	3 cut(s)	673, 1949, 2096
LweI	GCATC	5 cut(s)	775, 2187, 2824, 2835, 2999
MabI	ACCWGGT	1 cut(s)	2289
MaeI	CTAG	9 cut(s)	9, 50, 95, 729, 743, 893, 1322, 1751, 2514
MaeII	ACGT	7 cut(s)	880, 1190, 1243, 1458, 1776, 1843, 1932
MaeIII	GTNAC	7 cut(s)	254, 997, 1703, 1928, 2023, 2551, 2707
MbiI	CCGCTC	1 cut(s)	2580
MflI	RGATCY	2 cut(s)	1630, 2154
MhlI	GDGCHC	5 cut(s)	528, 1174, 2082, 2308, 3036
MlsI	TGGCCA	2 cut(s)	1028, 1357
MluCI	AATT	9 cut(s)	104, 329, 470, 1151, 1904, 2483, 2567, 2615, 3018
MluNI	TGGCCA	2 cut(s)	1028, 1357
Mly113I	GGCGCC	2 cut(s)	1506, 1885
MlyI	GAGTC	1 cut(s)	244
MmeI	TCCRAC	5 cut(s)	460, 1029, 1310, 2132, 2807
Mox20I	TGGCCA	2 cut(s)	1028, 1357
Mph1103I	ATGCAT	1 cut(s)	2202
MroNI	GCCGGC	1 cut(s)	2334
MscI	TGGCCA	2 cut(s)	1028, 1357
MseI	TTAA	8 cut(s)	137, 333, 1236, 2085, 2268, 2285, 2795, 2841
MslI	CAYNNNNRTG	5 cut(s)	66, 519, 2205, 2758, 2966
Msp20I	TGGCCA	2 cut(s)	1028, 1357
MspA1I	CMGCKG	1 cut(s)	1413
MspI	CCGG	7 cut(s)	15, 27, 185, 1175, 1383, 1888, 2335
MspR9I	CCNGG	6 cut(s)	1211, 1359, 1383, 1479, 1520, 2291
Mva1269I	GAATGC	4 cut(s)	364, 1519, 2246, 2753
MvaI	CCWGG	5 cut(s)	1211, 1359, 1479, 1520, 2291
MvnI	CGCG	1 cut(s)	673
NaeI	GCCGGC	1 cut(s)	2336
NarI	GGCGCC	2 cut(s)	1506, 1885
NciI	CCSGG	1 cut(s)	1383
NcoI	CCATGG	1 cut(s)	1029
NgoMIV	GCCGGC	1 cut(s)	2334
NheI	GCTAGC	1 cut(s)	8
NmeAIII	GCCGAG	2 cut(s)	1383, 1426
NmuCI	GTSAC	3 cut(s)	997, 1928, 2707
NsiI	ATGCAT	1 cut(s)	2202
NspI	RCATGY	1 cut(s)	2233
NspV	TTCGAA	1 cut(s)	1095
PaeI	GCATGC	1 cut(s)	2233
PceI	AGGCCT	2 cut(s)	1307, 2242
PciSI	GCTCTTC	1 cut(s)	66
PcsI	WCGNNNNNNNCGW	1 cut(s)	259
PctI	GAATGC	4 cut(s)	364, 1519, 2246, 2753
PdiI	GCCGGC	1 cut(s)	2336
PflFI	GACNNNGTC	1 cut(s)	1217
PfoI	TCCNGGA	1 cut(s)	1209
PkrI	GCNGC	3 cut(s)	663, 1939, 2111
Ple19I	CGATCG	1 cut(s)	1702
PleI	GAGTC	1 cut(s)	244
PluTI	GGCGCC	2 cut(s)	1509, 1888
PpsI	GAGTC	1 cut(s)	244
Ppu21I	YACGTR	1 cut(s)	1459
PpuMI	RGGWCCY	4 cut(s)	410, 1835, 2864, 3047
PshBI	ATTAAT	1 cut(s)	2268
Psp5II	RGGWCCY	4 cut(s)	410, 1835, 2864, 3047
Psp6I	CCWGG	5 cut(s)	1209, 1357, 1477, 1518, 2289
PspFI	CCCAGC	2 cut(s)	548, 2146
PspGI	CCWGG	5 cut(s)	1209, 1357, 1477, 1518, 2289
PspPI	GGNCC	8 cut(s)	410, 611, 973, 1375, 1766, 1835, 2864, 3047
PspPPI	RGGWCCY	4 cut(s)	410, 1835, 2864, 3047
PstI	CTGCAG	1 cut(s)	2077
PsuI	RGATCY	2 cut(s)	1630, 2154
PsyI	GACNNNGTC	1 cut(s)	1217
PvuI	CGATCG	1 cut(s)	1702
RsaI	GTAC	7 cut(s)	209, 914, 967, 1184, 1457, 1539, 1783
RsaNI	GTAC	7 cut(s)	208, 913, 966, 1183, 1456, 1538, 1782
RseI	CAYNNNNRTG	5 cut(s)	66, 519, 2205, 2758, 2966
SapI	GCTCTTC	1 cut(s)	66
SaqAI	TTAA	8 cut(s)	137, 333, 1236, 2085, 2268, 2285, 2795, 2841
SatI	GCNGC	3 cut(s)	662, 1938, 2110
Sau96I	GGNCC	8 cut(s)	410, 611, 973, 1375, 1766, 1835, 2864, 3047
SchI	GAGTC	1 cut(s)	244
ScrFI	CCNGG	6 cut(s)	1211, 1359, 1383, 1479, 1520, 2291
SduI	GDGCHC	5 cut(s)	528, 1174, 2082, 2308, 3036
SexAI	ACCWGGT	1 cut(s)	2289
SfaNI	GCATC	5 cut(s)	775, 2187, 2824, 2835, 2999
SfcI	CTRYAG	2 cut(s)	948, 2073
SfoI	GGCGCC	2 cut(s)	1507, 1886
SfuI	TTCGAA	1 cut(s)	1095
SinI	GGWCC	7 cut(s)	410, 973, 1375, 1766, 1835, 2864, 3047
SmiMI	CAYNNNNRTG	5 cut(s)	66, 519, 2205, 2758, 2966
SmlI	CTYRAG	5 cut(s)	691, 1293, 2375, 2384, 3035
SmoI	CTYRAG	5 cut(s)	691, 1293, 2375, 2384, 3035
SpeI	ACTAGT	1 cut(s)	49
SphI	GCATGC	1 cut(s)	2233
Sse9I	AATT	9 cut(s)	104, 329, 470, 1151, 1904, 2483, 2567, 2615, 3018
SseBI	AGGCCT	2 cut(s)	1307, 2242
SsiI	CCGC	7 cut(s)	568, 673, 757, 1413, 2112, 2580, 2654
SspDI	GGCGCC	2 cut(s)	1505, 1884
SspMI	CTAG	9 cut(s)	9, 50, 95, 729, 743, 893, 1322, 1751, 2514
StuI	AGGCCT	2 cut(s)	1307, 2242
StyD4I	CCNGG	6 cut(s)	1209, 1357, 1381, 1477, 1518, 2289
StyI	CCWWGG	5 cut(s)	1029, 1371, 1762, 1942, 2662
TaiI	ACGT	7 cut(s)	883, 1193, 1246, 1461, 1779, 1846, 1935
TaqI	TCGA	7 cut(s)	339, 648, 1095, 1246, 1428, 1525, 2543
TasI	AATT	9 cut(s)	104, 329, 470, 1151, 1904, 2483, 2567, 2615, 3018
TatI	WGTACW	1 cut(s)	1182
Tru1I	TTAA	8 cut(s)	137, 333, 1236, 2085, 2268, 2285, 2795, 2841
Tru9I	TTAA	8 cut(s)	137, 333, 1236, 2085, 2268, 2285, 2795, 2841
TscAI	CASTG	7 cut(s)	248, 783, 1015, 2082, 2538, 2775, 2985
TseFI	GTSAC	3 cut(s)	997, 1928, 2707
TseI	GCWGC	3 cut(s)	661, 1937, 2109
Tsp45I	GTSAC	3 cut(s)	997, 1928, 2707
TspGWI	ACGGA	1 cut(s)	2049
TspRI	CASTG	7 cut(s)	248, 783, 1015, 2082, 2538, 2775, 2985
Tth111I	GACNNNGTC	1 cut(s)	1217
VneI	GTGCAC	1 cut(s)	524
VpaK11BI	GGWCC	7 cut(s)	410, 973, 1375, 1766, 1835, 2864, 3047
VspI	ATTAAT	1 cut(s)	2268
XagI	CCTNNNNNAGG	2 cut(s)	1323, 2087
XapI	RAATTY	5 cut(s)	329, 470, 1151, 1904, 2483
XbaI	TCTAGA	4 cut(s)	94, 892, 1321, 1750
XceI	RCATGY	1 cut(s)	2233
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1499, 1516
XmiI	GTMKAC	2 cut(s)	193, 2941
XspI	CTAG	9 cut(s)	9, 50, 95, 729, 743, 893, 1322, 1751, 2514
Zsp2I	ATGCAT	1 cut(s)	2202

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.