Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0010643

Physical Location & Seq

Genomic Coordinates Reverse (-)

567231 .. 571677

Gene Structure 4447 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000015676

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3159 bp

ATGGAAGCCAGTGCCGGACTTGTTGCCGGTTCTCACAACCGGAATGAACTCGTCGTCATACATGGTCACGAAGAGCACAAGCCTTTGAGGAACTTGGACGGCCAGGTTTGCGAGATATGTGGAGACGAGGTTGGACTGACGGTGGATGGAGACTTGTTTGTGGCTTGCAACGAGTGTGGATTCCCTGTGTGCAGGCCTTGCTATGAGTATGAGAGGAGAGAAGGCTCTCAGAACTGCCCTCAGTGCAAAACCAGGTACAAGCACGATGACGAAGAGGATGTGGATGATATTGAGCATGAATTTAACATGAATGAAGATGATCAACACAATAAGGGTATCAAAAACAATGAGCAAATCGCGGAAGCAATGCTCCATGGAAAGATGAGCTATGGAAGAGGACCAGATGATGAGGAGAATTCCCAATTCCCACCAGTTATTGCTGGTGTCAGATCCCGCCCGGTGAGTAACAATTTTGTTTTAGGCACCCAGCAACTACCTGTTAGCGGCGAGCTCACATACTTATCTCATGGTTATGGAGATAAGCCTTCTCCGTTGCATAAACGAGTTCATCCATATCCACCTTCTGAGCCTGGAAGTGAAAAATGGGATGAGAAGAAAGATGGAGGGTGGAAGGAACGAATGGATGATTGGAAATTGCAGCAAGGCAACTTGGGAGGGCCTGAACCTGATGACATGAACGACACAGACATGTCAATGATTGATGAAGCTAGGCAGCCACTGTCAAGGAAAGTATCAATTGCATCTAGCAAGATCAACCCTTATCGAATGATCATTGTGGCTCGGCTGTTTATTTTGGCTGCATTCCTCCGGTATAGACTTATGAATCCGGTTCATGATGCACTTGGTCTCTGGTTAACTTCTGTCATTTGTGAGATATGGTTTGCAATTTCATGGATCCTTGATCAGTTCCCTAAGTGGTACCCTATTGAGCGCGAGACCTACCTTGATCGCCTTTCACTAAGGTATGAGAGGGAGGGTGAACCAAACATGCTATGCCCAGTAGATGTATTTGTGAGTACTGTGGATCCCATGAAGGAACCTCCACTTAATACAGCAAATACAGTCCTTTCAATCTTGGCCATGGACTATCCTGTTGAAAAAATCTCATGCTACATTTCTGATGATGGAGCTTCCATGCTCACCTTTGAGGCCTTGTCTGAAACAGCAGAATTTGCAAGGAAATGGGTACCCTTTTGCAAGAAATTTTCTATTGAGCCTAGAGCCCCCGAGATGTACTTCTGTGAGAAGATTGATTACCTAAAGGACAAGGTTCAGCCAACATTTGTCAAGGAACGTCGAGCTATGAAGAGAGAATATGAAGAGTTCAAGGTTAGGATAAATGCGCTTGTGGCCAAAGCCACAAAGGTTCCTCCAGAAGGGTGGATTATGCAAGATGGGACACCATGGCCCGGAAACAATACTAAGGACCACCCTGGTATGATTCAGGTCTTTCTTGGTCACAGTGGAGGCCTTGATACTGAAGGAAATGAGCTCCCTCGTCTTGTCTATGTGTCTCGTGAGAAGAGGCCTGGCTTTTCACATCACAAGAAGGCTGGTGCCATGAATGCCTTGGTCCGCGTCTCTGGAGTGCTCACCAATGCTCCTTTCATGCTCAACTTGGATTGTGATCATTATGTTAACAACAGTAAGGCTGCAAGAGAAGCCATGTGTTTCTTGATGGACCCTCAAATTGGAAGGAAGGTTTGCTATGTCCAGTTTCCTCAAAGATTTGATGGCATTGATAGAAATGATCGTTATGCCAACAGGAACACAGTCTTCTTTGATATTAACATGAAAGGTCTGGATGGAATTCAAGGTCCGGTGTATGTGGGCACAGGATGTGTTTTCAGAAGGCAAGCTTTGTATGGATATAATCCTCCAAGGGGTCCTAAGCGCCCAAAGATGGTAAGCTGTGACTGCTGCCCATGTTTTGGACGCCGCAAGAAGCTTCCAAAGTATTCCAAGAATGATGCAAATGGAGATGGTGCAAACCTCCAACTACAAGGAATGGATGATGACAAAGAGCTATTGATGTCCCATATGAATTTTGAAAAGACATTCGGACAGTCAGCTATTTTCGTGACTTCAACTTTAATGGAACAAGGAGGTGTCCCTCCTTCCTCAAGTCCTGCTGCCATGCTTAAGGAAGCCATTCATGTTATCAGTTGTGGTTATGAAGACAAAACTGAATGGGGAATTGAGCTGGGTTGGATTTACGGATCTATCACAGAGGATATCTTGACAGGGTTCAAAATGCATTGCCGTGGTTGGAGGTCTATTTACTGTATGCCAAAGAGACCTGCATTCAAGGGTACAGCTCCCATCAACTTGTCAGATCGGCTCAACCAGGTGCTTCGTTGGGCGCTTGGTTCCATTGAGATTTTCTTCAGTCGCCACAGTCCCCTCTTGTATGGCTACAAGGGAGGGAAGCTCAAGTGGCTTGAGAGATTCGCTTATGTCAACACTACTATCTACCCTTTCACCTCTCTTCCTCTTCTTGCCTATTGTATCCTCCCTGCCATCTGCTTGCTCACCGATAAATTCATCATGCCACCGATAAGCACTTTTGCAAGTCTCTTCTTCATTGCTCTGTTCCTTTCAATCTTTGGTACTGGCATTCTTGAGCTAAGATGGAGTGGAGTGAGAATTGAAGAATGGTGGAGAAATGAGCAATTCTGGGTGATTGGCGGTGTGTCAGCTCACCTCTACGCTGTTATCCAAGGTCTTCTGAAGGTCTTGGCTGGAATTGACACCAGCTTCACTGTCACAGCCAAGTCTGCAGATGATGAGGATTTTGGAGAGTTGTACGCCTTTAAATGGACAACTCTCCTAATCCCTCCAACCACTATCTTAATCATTAACCTTGTTGGAGTAGTTGCTGGGATTTCAGATGCCATAAACAATGGATACGAATCATGGGGACCTCTATTTGGAAAGCTCTTCTTTGCCTTCTGGGTGATTGTCCATCTATATCCATTCCTTAAAGGTCTGATGGGGAGGCAGAACCGTACGCCAACAATTGTTGTCATATGGTCCGTGCTCCTGGCTTCTATTTTCTCCTTACTCTGGGTTCGAATCGACCCATTTGTGTTGAAAACCAAGGGACCTACCACAAAGCAATGTGGAATCAATTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009507 GO:0009536 GO:0009664 GO:0009832 GO:0009833 GO:0009834 GO:0009987 GO:0010330 GO:0010393 GO:0010395 GO:0010400 GO:0012505 GO:0016020 GO:0016043 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0017144 GO:0022402 GO:0030243 GO:0030244 GO:0032991 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0045488 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0052546 GO:0061640 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1902494 GO:1903047 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

1053

Amino Acids

119.14

Weight (kDa)

6.26

Isoelectric Point (pI)

40.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	27 - 90	1.8e-33	Zinc-binding RING-finger
Cellulose_synt	PF03552	341 - 1046	0.0	Cellulose synthase
Glyco_trans_2_3	PF13632	729 - 848	4.8e-06	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17420
fragaria_vesca	FvH4_1g00670
malus_domestica	MD02G1005600.v1.1 MD15G1150200.v1.1 MD15G1150300.v1.1
prunus_persica	Prupe.7G265400_v2.0.a1
pyrus_communis	pycom02g00450 pycom15g13420 pycom15g13430 pycom15g13440
rosa_chinensis	RchiOBHm_Chr2g0085301 RchiOBHm_Chr2g0175181
rosa_laevigata	RLG00000015676
rosa_multiflora	Rmu_sc0008510.1_g000012
rosa_rugosa	Rorug01G0459400
rosa_samantha	Rh2AG007700 Rh2BG008400 Rh2CG009100 Rh2DG009600
rosa_wichuraiana	Rw2G000740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2329
Acc65I	GGTACC	2 cut(s)	939, 1207
AccB1I	GGYRCC	4 cut(s)	482, 939, 1207, 1577
AccB7I	CCANNNNNTGG	1 cut(s)	1952
AccII	CGCG	3 cut(s)	359, 954, 1599
AciI	CCGC	6 cut(s)	359, 454, 504, 1597, 1960, 2709
AclWI	GGATC	6 cut(s)	444, 910, 923, 1040, 1053, 2248
AcoI	YGGCCR	3 cut(s)	100, 1098, 1371
AcsI	RAATTY	7 cut(s)	299, 415, 1190, 1223, 1830, 2065, 2561
AcuI	CTGAAG	3 cut(s)	1521, 2392, 2771
AcyI	GRCGYC	1 cut(s)	1957
AfaI	GTAC	9 cut(s)	257, 941, 1039, 1209, 1256, 2335, 2632, 2828, 3031
AflII	CTTAAG	1 cut(s)	2162
AflIII	ACRYGT	1 cut(s)	708
AjnI	CCWGG	7 cut(s)	102, 251, 589, 1453, 1549, 2367, 3063
AjuI	GAANNNNNNNTTGG	4 cut(s)	631, 663, 1610, 1642
Alw21I	GWGCWC	5 cut(s)	78, 513, 1515, 1614, 3063
Alw26I	GTCTC	8 cut(s)	117, 144, 872, 950, 1539, 1606, 2311, 2600
AlwI	GGATC	6 cut(s)	444, 910, 923, 1040, 1053, 2248
AlwNI	CAGNNNCTG	1 cut(s)	739
Ama87I	CYCGRG	1 cut(s)	1247
AoxI	GGCC	9 cut(s)	100, 194, 677, 1098, 1170, 1371, 1427, 1489, 1547
ApeKI	GCWGC	6 cut(s)	658, 733, 818, 1673, 1941, 2153
ApoI	RAATTY	7 cut(s)	299, 415, 1190, 1223, 1830, 2065, 2561
Asp700I	GAANNNNTTC	1 cut(s)	2172
Asp718I	GGTACC	2 cut(s)	939, 1207
AspLEI	GCGC	4 cut(s)	954, 1366, 1917, 2386
AsuC2I	CCSGG	2 cut(s)	458, 1431
AsuHPI	GGTGA	9 cut(s)	472, 1010, 1153, 1606, 2494, 2545, 2713, 2714, 2989
AsuII	TTCGAA	1 cut(s)	3094
AvaI	CYCGRG	1 cut(s)	1247
AvaII	GGWCC	9 cut(s)	398, 1447, 1594, 1702, 1838, 1907, 2942, 3054, 3125
BaeGI	GKGCMC	1 cut(s)	1856
BalI	TGGCCA	2 cut(s)	1100, 1373
BamHI	GGATCC	2 cut(s)	915, 1045
BanI	GGYRCC	4 cut(s)	482, 939, 1207, 1577
BanII	GRGCYC	3 cut(s)	513, 1246, 1515
BarI	GAAGNNNNNNTAC	2 cut(s)	1259, 1291
BauI	CACGAG	1 cut(s)	1536
BbsI	GAAGAC	3 cut(s)	1789, 2205, 2738
Bbv12I	GWGCWC	5 cut(s)	78, 513, 1515, 1614, 3063
BbvI	GCAGC	6 cut(s)	670, 745, 805, 1660, 1928, 2140
BceAI	ACGGC	2 cut(s)	115, 2268
BciT130I	CCWGG	7 cut(s)	104, 253, 591, 1455, 1551, 2369, 3065
BciVI	GTATCC	2 cut(s)	2540, 2921
BclI	TGATCA	4 cut(s)	319, 789, 922, 1648
BcnI	CCSGG	2 cut(s)	458, 1431
BcoDI	GTCTC	8 cut(s)	117, 144, 872, 950, 1539, 1606, 2311, 2600
BfaI	CTAG	3 cut(s)	729, 765, 1239
BfmI	CTRYAG	1 cut(s)	2799
BfoI	RGCGCY	2 cut(s)	1918, 2387
BfrI	CTTAAG	1 cut(s)	2162
BfuAI	ACCTGC	1 cut(s)	2329
BfuI	GTATCC	2 cut(s)	2540, 2921
BisI	GCNGC	8 cut(s)	505, 659, 734, 819, 1674, 1942, 1960, 2154
BlsI	GCNGC	8 cut(s)	506, 660, 735, 820, 1675, 1943, 1961, 2155
BmcAI	AGTACT	1 cut(s)	1039
Bme1390I	CCNGG	9 cut(s)	104, 253, 458, 591, 1431, 1455, 1551, 2369, 3065
Bme18I	GGWCC	9 cut(s)	398, 1447, 1594, 1702, 1838, 1907, 2942, 3054, 3125
BmeT110I	CYCGRG	1 cut(s)	1247
BmrFI	CCNGG	9 cut(s)	104, 253, 458, 591, 1431, 1455, 1551, 2369, 3065
BmrI	ACTGGG	1 cut(s)	1013
BmsI	GCATC	4 cut(s)	770, 847, 1981, 2902
BmuI	ACTGGG	1 cut(s)	1013
BpiI	GAAGAC	3 cut(s)	1789, 2205, 2738
BplI	GAGNNNNNCTC	2 cut(s)	2436, 2468
BpmI	CTGGAG	2 cut(s)	1377, 1626
Bpu10I	CCTNAGC	1 cut(s)	1911
Bpu14I	TTCGAA	1 cut(s)	3094
BpuEI	CTTGAG	4 cut(s)	2128, 2438, 2483, 2663
BpuMI	CCSGG	2 cut(s)	458, 1431
BsaBI	GATNNNNATC	2 cut(s)	1647, 2932
BsaHI	GRCGYC	1 cut(s)	1957
BsaI	GGTCTC	3 cut(s)	872, 950, 2311
BsaJI	CCNNGG	9 cut(s)	373, 1101, 1424, 1453, 1590, 1901, 2284, 2740, 3120
BsaWI	WCCGGW	4 cut(s)	39, 828, 847, 1840
BsaXI	ACNNNNNCTCC	4 cut(s)	114, 144, 1606, 1636
Bse118I	RCCGGY	1 cut(s)	26
Bse1I	ACTGG	5 cut(s)	9, 431, 1019, 1735, 2638
Bse3DI	GCAATG	4 cut(s)	372, 2278, 2604, 3146
Bse8I	GATNNNNATC	2 cut(s)	1647, 2932
BseBI	CCWGG	7 cut(s)	104, 253, 591, 1455, 1551, 2369, 3065
BseDI	CCNNGG	9 cut(s)	373, 1101, 1424, 1453, 1590, 1901, 2284, 2740, 3120
BseGI	GGATG	9 cut(s)	151, 283, 289, 568, 613, 649, 1831, 1865, 2038
BseJI	GATNNNNATC	2 cut(s)	1647, 2932
BseMI	GCAATG	4 cut(s)	372, 2278, 2604, 3146
BseMII	CTCAG	3 cut(s)	242, 254, 576
BseNI	ACTGG	5 cut(s)	9, 431, 1019, 1735, 2638
BseRI	GAGGAG	2 cut(s)	229, 425
BseSI	GKGCMC	1 cut(s)	1856
BseXI	GCAGC	6 cut(s)	670, 745, 805, 1660, 1928, 2140
BseYI	CCCAGC	3 cut(s)	486, 2224, 2900
BsgI	GTGCAG	1 cut(s)	211
Bsh1236I	CGCG	3 cut(s)	359, 954, 1599
BshFI	GGCC	9 cut(s)	102, 196, 679, 1100, 1172, 1373, 1429, 1491, 1549
BshNI	GGYRCC	4 cut(s)	482, 939, 1207, 1577
BsiHKAI	GWGCWC	5 cut(s)	78, 513, 1515, 1614, 3063
BsiHKCI	CYCGRG	1 cut(s)	1247
BsiSI	CCGG	8 cut(s)	15, 27, 40, 458, 829, 848, 1431, 1841
BsiWI	CGTACG	1 cut(s)	3029
BslFI	GGGAC	6 cut(s)	1432, 2041, 2117, 2406, 2955, 3138
BsmAI	GTCTC	8 cut(s)	117, 144, 872, 950, 1539, 1606, 2311, 2600
BsmBI	CGTCTC	2 cut(s)	117, 1606
BsmFI	GGGAC	6 cut(s)	1432, 2041, 2117, 2406, 2955, 3138
BsmI	GAATGC	4 cut(s)	821, 1591, 2324, 2637
BsnI	GGCC	9 cut(s)	102, 196, 679, 1100, 1172, 1373, 1429, 1491, 1549
Bso31I	GGTCTC	3 cut(s)	872, 950, 2311
BsoBI	CYCGRG	1 cut(s)	1247
Bsp119I	TTCGAA	1 cut(s)	3094
Bsp1286I	GDGCHC	7 cut(s)	78, 513, 1246, 1515, 1614, 1856, 3063
Bsp19I	CCATGG	3 cut(s)	373, 1101, 1424
BspACI	CCGC	6 cut(s)	359, 454, 504, 1597, 1960, 2709
BspANI	GGCC	9 cut(s)	102, 196, 679, 1100, 1172, 1373, 1429, 1491, 1549
BspCNI	CTCAG	3 cut(s)	241, 253, 577
BspFNI	CGCG	3 cut(s)	359, 954, 1599
BspHI	TCATGA	1 cut(s)	853
BspMAI	CTGCAG	1 cut(s)	2803
BspMI	ACCTGC	1 cut(s)	2329
BspPI	GGATC	6 cut(s)	444, 910, 923, 1040, 1053, 2248
BspQI	GCTCTTC	2 cut(s)	66, 2966
BspT104I	TTCGAA	1 cut(s)	3094
BspT107I	GGYRCC	4 cut(s)	482, 939, 1207, 1577
BspTI	CTTAAG	1 cut(s)	2162
BspTNI	GGTCTC	3 cut(s)	872, 950, 2311
BsrDI	GCAATG	4 cut(s)	372, 2278, 2604, 3146
BsrFI	RCCGGY	1 cut(s)	26
BsrI	ACTGG	5 cut(s)	9, 431, 1019, 1735, 2638
BssAI	RCCGGY	1 cut(s)	26
BssECI	CCNNGG	9 cut(s)	373, 1101, 1424, 1453, 1590, 1901, 2284, 2740, 3120
BssNI	GRCGYC	1 cut(s)	1957
BssSI	CACGAG	1 cut(s)	1536
BssT1I	CCWWGG	7 cut(s)	373, 1101, 1424, 1590, 1901, 2740, 3120
Bst2BI	CACGAG	1 cut(s)	1536
Bst2UI	CCWGG	7 cut(s)	104, 253, 591, 1455, 1551, 2369, 3065
BstACI	GRCGYC	1 cut(s)	1957
BstAFI	CTTAAG	1 cut(s)	2162
BstAPI	GCANNNNNTGC	2 cut(s)	198, 1193
BstBI	TTCGAA	1 cut(s)	3094
BstC8I	GCNNGC	5 cut(s)	166, 194, 509, 1878, 2549
BstDEI	CTNAG	8 cut(s)	228, 240, 585, 933, 980, 1443, 1911, 2648
BstDSI	CCRYGG	4 cut(s)	373, 1101, 1424, 2284
BstENI	CCTNNNNNAGG	1 cut(s)	1395
BstF5I	GGATG	9 cut(s)	151, 283, 289, 568, 613, 649, 1831, 1865, 2038
BstFNI	CGCG	3 cut(s)	359, 954, 1599
BstH2I	RGCGCY	2 cut(s)	1918, 2387
BstHHI	GCGC	4 cut(s)	954, 1366, 1917, 2386
BstMAI	GTCTC	8 cut(s)	117, 144, 872, 950, 1539, 1606, 2311, 2600
BstNI	CCWGG	7 cut(s)	104, 253, 591, 1455, 1551, 2369, 3065
BstNSI	RCATGY	2 cut(s)	712, 1012
BstSCI	CCNGG	9 cut(s)	102, 251, 456, 589, 1429, 1453, 1549, 2367, 3063
BstSFI	CTRYAG	1 cut(s)	2799
BstSLI	GKGCMC	1 cut(s)	1856
BstUI	CGCG	3 cut(s)	359, 954, 1599
BstV1I	GCAGC	6 cut(s)	670, 745, 805, 1660, 1928, 2140
BstV2I	GAAGAC	3 cut(s)	1789, 2205, 2738
BstX2I	RGATCY	4 cut(s)	449, 915, 1045, 2240
BstXI	CCANNNNNNTGG	1 cut(s)	1401
BstYI	RGATCY	4 cut(s)	449, 915, 1045, 2240
BsuI	GTATCC	2 cut(s)	2540, 2921
BsuRI	GGCC	9 cut(s)	102, 196, 679, 1100, 1172, 1373, 1429, 1491, 1549
BtgI	CCRYGG	4 cut(s)	373, 1101, 1424, 2284
BtsCI	GGATG	9 cut(s)	151, 283, 289, 568, 613, 649, 1831, 1865, 2038
BtsIMutI	CAGTG	5 cut(s)	16, 248, 737, 1489, 2781
BveI	ACCTGC	1 cut(s)	2329
Cac8I	GCNNGC	5 cut(s)	166, 194, 509, 1878, 2549
CaiI	CAGNNNCTG	1 cut(s)	739
CciI	TCATGA	1 cut(s)	853
CfoI	GCGC	4 cut(s)	954, 1366, 1917, 2386
Cfr10I	RCCGGY	1 cut(s)	26
CseI	GACGC	2 cut(s)	1588, 1965
CsiI	ACCWGGT	2 cut(s)	251, 2367
Csp6I	GTAC	9 cut(s)	256, 940, 1038, 1208, 1255, 2334, 2631, 2827, 3030
CspCI	CAANNNNNGTGG	2 cut(s)	157, 192
CviQI	GTAC	9 cut(s)	256, 940, 1038, 1208, 1255, 2334, 2631, 2827, 3030
DdeI	CTNAG	8 cut(s)	228, 240, 585, 933, 980, 1443, 1911, 2648
DraI	TTTAAA	1 cut(s)	2836
EaeI	YGGCCR	3 cut(s)	100, 1098, 1371
Ecl136II	GAGCTC	2 cut(s)	511, 1513
Eco130I	CCWWGG	7 cut(s)	373, 1101, 1424, 1590, 1901, 2740, 3120
Eco147I	AGGCCT	4 cut(s)	196, 1172, 1491, 1549
Eco24I	GRGCYC	3 cut(s)	513, 1246, 1515
Eco31I	GGTCTC	3 cut(s)	872, 950, 2311
Eco32I	GATATC	1 cut(s)	2257
Eco47I	GGWCC	9 cut(s)	398, 1447, 1594, 1702, 1838, 1907, 2942, 3054, 3125
Eco53kI	GAGCTC	2 cut(s)	511, 1513
Eco57I	CTGAAG	3 cut(s)	1521, 2392, 2771
Eco88I	CYCGRG	1 cut(s)	1247
EcoICRI	GAGCTC	2 cut(s)	511, 1513
EcoNI	CCTNNNNNAGG	1 cut(s)	1395
EcoO109I	RGGNCCY	4 cut(s)	677, 1907, 2942, 3125
EcoRI	GAATTC	2 cut(s)	415, 1830
EcoRII	CCWGG	7 cut(s)	102, 251, 589, 1453, 1549, 2367, 3063
EcoRV	GATATC	1 cut(s)	2257
EcoT14I	CCWWGG	7 cut(s)	373, 1101, 1424, 1590, 1901, 2740, 3120
EcoT22I	ATGCAT	1 cut(s)	2280
EcoT38I	GRGCYC	3 cut(s)	513, 1246, 1515
ErhI	CCWWGG	7 cut(s)	373, 1101, 1424, 1590, 1901, 2740, 3120
Esp3I	CGTCTC	2 cut(s)	117, 1606
FalI	AAGNNNNNCTT	4 cut(s)	1864, 1896, 2948, 2980
FaqI	GGGAC	6 cut(s)	1432, 2041, 2117, 2406, 2955, 3138
FauI	CCCGC	1 cut(s)	461
FauNDI	CATATG	2 cut(s)	2061, 3050
FbaI	TGATCA	4 cut(s)	319, 789, 922, 1648
Fnu4HI	GCNGC	8 cut(s)	505, 659, 734, 819, 1674, 1942, 1960, 2154
FokI	GGATG	9 cut(s)	158, 290, 296, 555, 620, 656, 1838, 1872, 2045
FriOI	GRGCYC	3 cut(s)	513, 1246, 1515
Fsp4HI	GCNGC	8 cut(s)	505, 659, 734, 819, 1674, 1942, 1960, 2154
FspBI	CTAG	3 cut(s)	729, 765, 1239
GlaI	GCGC	4 cut(s)	953, 1365, 1916, 2385
GluI	GCNGC	8 cut(s)	505, 659, 734, 819, 1674, 1942, 1960, 2154
GsaI	CCCAGC	3 cut(s)	490, 2228, 2904
GsuI	CTGGAG	2 cut(s)	1377, 1626
HaeII	RGCGCY	2 cut(s)	1918, 2387
HaeIII	GGCC	9 cut(s)	102, 196, 679, 1100, 1172, 1373, 1429, 1491, 1549
HapII	CCGG	8 cut(s)	15, 27, 40, 458, 829, 848, 1431, 1841
HgaI	GACGC	2 cut(s)	1588, 1965
HhaI	GCGC	4 cut(s)	954, 1366, 1917, 2386
Hin1I	GRCGYC	1 cut(s)	1957
Hin6I	GCGC	4 cut(s)	952, 1364, 1915, 2384
HinP1I	GCGC	4 cut(s)	952, 1364, 1915, 2384
HincII	GTYRAC	3 cut(s)	876, 1660, 2482
HindII	GTYRAC	3 cut(s)	876, 1660, 2482
HindIII	AAGCTT	2 cut(s)	1878, 1967
HinfI	GANTC	7 cut(s)	180, 844, 1462, 2469, 2933, 3096, 3147
HpaI	GTTAAC	2 cut(s)	876, 1660
HpaII	CCGG	8 cut(s)	15, 27, 40, 458, 829, 848, 1431, 1841
HphI	GGTGA	9 cut(s)	472, 1010, 1153, 1606, 2494, 2545, 2713, 2714, 2989
Hpy166II	GTNNAC	4 cut(s)	876, 1001, 1660, 2482
Hpy8I	GTNNAC	4 cut(s)	876, 1001, 1660, 2482
Hpy99I	CGWCG	2 cut(s)	56, 1320
HpyCH4IV	ACGT	1 cut(s)	1315
HpyF3I	CTNAG	8 cut(s)	228, 240, 585, 933, 980, 1443, 1911, 2648
HpySE526I	ACGT	1 cut(s)	1315
Hsp92I	GRCGYC	1 cut(s)	1957
HspAI	GCGC	4 cut(s)	952, 1364, 1915, 2384
KpnI	GGTACC	2 cut(s)	943, 1211
Ksp22I	TGATCA	4 cut(s)	319, 789, 922, 1648
KspAI	GTTAAC	2 cut(s)	876, 1660
LguI	GCTCTTC	2 cut(s)	66, 2966
LmnI	GCTCC	6 cut(s)	375, 1148, 1518, 1627, 2344, 3066
Lsp1109I	GCAGC	6 cut(s)	670, 745, 805, 1660, 1928, 2140
LweI	GCATC	4 cut(s)	770, 847, 1981, 2902
MabI	ACCWGGT	2 cut(s)	251, 2367
MaeI	CTAG	3 cut(s)	729, 765, 1239
MaeII	ACGT	1 cut(s)	1315
MaeIII	GTNAC	6 cut(s)	65, 464, 1478, 1934, 2101, 2785
MfeI	CAATTG	3 cut(s)	756, 3039, 3151
MflI	RGATCY	4 cut(s)	449, 915, 1045, 2240
MhlI	GDGCHC	7 cut(s)	78, 513, 1246, 1515, 1614, 1856, 3063
MlsI	TGGCCA	2 cut(s)	1100, 1373
MluNI	TGGCCA	2 cut(s)	1100, 1373
MmeI	TCCRAC	6 cut(s)	112, 2041, 2210, 2270, 2869, 2885
Mox20I	TGGCCA	2 cut(s)	1100, 1373
Mph1103I	ATGCAT	1 cut(s)	2280
MroXI	GAANNNNTTC	1 cut(s)	2172
MscI	TGGCCA	2 cut(s)	1100, 1373
MslI	CAYNNNNRTG	4 cut(s)	531, 707, 713, 2283
Msp20I	TGGCCA	2 cut(s)	1100, 1373
MspCI	CTTAAG	1 cut(s)	2162
MspI	CCGG	8 cut(s)	15, 27, 40, 458, 829, 848, 1431, 1841
MspR9I	CCNGG	9 cut(s)	104, 253, 458, 591, 1431, 1455, 1551, 2369, 3065
MunI	CAATTG	3 cut(s)	756, 3039, 3151
Mva1269I	GAATGC	4 cut(s)	821, 1591, 2324, 2637
MvaI	CCWGG	7 cut(s)	104, 253, 591, 1455, 1551, 2369, 3065
MvnI	CGCG	3 cut(s)	359, 954, 1599
NciI	CCSGG	2 cut(s)	458, 1431
NcoI	CCATGG	3 cut(s)	373, 1101, 1424
NdeI	CATATG	2 cut(s)	2061, 3050
NmeAIII	GCCGAG	1 cut(s)	781
NmuCI	GTSAC	5 cut(s)	65, 1478, 1934, 2101, 2785
NsiI	ATGCAT	1 cut(s)	2280
NspI	RCATGY	2 cut(s)	712, 1012
NspV	TTCGAA	1 cut(s)	3094
PagI	TCATGA	1 cut(s)	853
PceI	AGGCCT	4 cut(s)	196, 1172, 1491, 1549
PciI	ACATGT	1 cut(s)	708
PciSI	GCTCTTC	2 cut(s)	66, 2966
PctI	GAATGC	4 cut(s)	821, 1591, 2324, 2637
PdmI	GAANNNNTTC	1 cut(s)	2172
PfeI	GAWTC	7 cut(s)	180, 844, 1462, 2469, 2933, 3096, 3147
Pfl23II	CGTACG	1 cut(s)	3029
PflMI	CCANNNNNTGG	1 cut(s)	1952
PkrI	GCNGC	8 cut(s)	506, 660, 735, 820, 1675, 1943, 1961, 2155
PpuMI	RGGWCCY	3 cut(s)	1907, 2942, 3125
PscI	ACATGT	1 cut(s)	708
Psp124BI	GAGCTC	2 cut(s)	513, 1515
Psp5II	RGGWCCY	3 cut(s)	1907, 2942, 3125
Psp6I	CCWGG	7 cut(s)	102, 251, 589, 1453, 1549, 2367, 3063
PspFI	CCCAGC	3 cut(s)	486, 2224, 2900
PspGI	CCWGG	7 cut(s)	102, 251, 589, 1453, 1549, 2367, 3063
PspLI	CGTACG	1 cut(s)	3029
PspPPI	RGGWCCY	3 cut(s)	1907, 2942, 3125
PstI	CTGCAG	1 cut(s)	2803
PstNI	CAGNNNCTG	1 cut(s)	739
PsuI	RGATCY	4 cut(s)	449, 915, 1045, 2240
RsaI	GTAC	9 cut(s)	257, 941, 1039, 1209, 1256, 2335, 2632, 2828, 3031
RsaNI	GTAC	9 cut(s)	256, 940, 1038, 1208, 1255, 2334, 2631, 2827, 3030
RseI	CAYNNNNRTG	4 cut(s)	531, 707, 713, 2283
SacI	GAGCTC	2 cut(s)	513, 1515
SapI	GCTCTTC	2 cut(s)	66, 2966
SatI	GCNGC	8 cut(s)	505, 659, 734, 819, 1674, 1942, 1960, 2154
ScaI	AGTACT	1 cut(s)	1039
ScrFI	CCNGG	9 cut(s)	104, 253, 458, 591, 1431, 1455, 1551, 2369, 3065
SduI	GDGCHC	7 cut(s)	78, 513, 1246, 1515, 1614, 1856, 3063
SexAI	ACCWGGT	2 cut(s)	251, 2367
SfaNI	GCATC	4 cut(s)	770, 847, 1981, 2902
SfcI	CTRYAG	1 cut(s)	2799
SfuI	TTCGAA	1 cut(s)	3094
SinI	GGWCC	9 cut(s)	398, 1447, 1594, 1702, 1838, 1907, 2942, 3054, 3125
SmiMI	CAYNNNNRTG	4 cut(s)	531, 707, 713, 2283
SmlI	CTYRAG	5 cut(s)	2143, 2162, 2453, 2462, 2642
SmoI	CTYRAG	5 cut(s)	2143, 2162, 2453, 2462, 2642
SseBI	AGGCCT	4 cut(s)	196, 1172, 1491, 1549
SsiI	CCGC	6 cut(s)	359, 454, 504, 1597, 1960, 2709
SspMI	CTAG	3 cut(s)	729, 765, 1239
SstI	GAGCTC	2 cut(s)	513, 1515
StuI	AGGCCT	4 cut(s)	196, 1172, 1491, 1549
StyD4I	CCNGG	9 cut(s)	102, 251, 456, 589, 1429, 1453, 1549, 2367, 3063
StyI	CCWWGG	7 cut(s)	373, 1101, 1424, 1590, 1901, 2740, 3120
TaiI	ACGT	1 cut(s)	1318
TaqI	TCGA	4 cut(s)	784, 1318, 3094, 3099
TatI	WGTACW	2 cut(s)	1037, 1254
TauI	GCSGC	2 cut(s)	507, 1962
TfiI	GAWTC	7 cut(s)	180, 844, 1462, 2469, 2933, 3096, 3147
TscAI	CASTG	5 cut(s)	16, 248, 744, 1489, 2788
TseFI	GTSAC	5 cut(s)	65, 1478, 1934, 2101, 2785
TseI	GCWGC	6 cut(s)	658, 733, 818, 1673, 1941, 2153
Tsp45I	GTSAC	5 cut(s)	65, 1478, 1934, 2101, 2785
TspGWI	ACGGA	3 cut(s)	540, 2253, 3046
TspRI	CASTG	5 cut(s)	16, 248, 744, 1489, 2788
Van91I	CCANNNNNTGG	1 cut(s)	1952
Vha464I	CTTAAG	1 cut(s)	2162
VpaK11BI	GGWCC	9 cut(s)	398, 1447, 1594, 1702, 1838, 1907, 2942, 3054, 3125
XagI	CCTNNNNNAGG	1 cut(s)	1395
XapI	RAATTY	7 cut(s)	299, 415, 1190, 1223, 1830, 2065, 2561
XceI	RCATGY	2 cut(s)	712, 1012
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1588
XmnI	GAANNNNTTC	1 cut(s)	2172
XspI	CTAG	3 cut(s)	729, 765, 1239
ZrmI	AGTACT	1 cut(s)	1039
Zsp2I	ATGCAT	1 cut(s)	2280

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.