Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0010643

Physical Location & Seq

Genomic Coordinates Reverse (-)

354453 .. 358856

Gene Structure 4404 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g00670.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3150 bp

ATGGAAGCCAGCGCCGGACTTGTTGCCGGTTCTCACAACCGCAACGAACTCGTGGTCATTCATGGTCACGAAGAGCACAAGCCTTTGAGGAACTTGGACGGCCAGGTTTGCGAGATATGTGGAGACGAGGTTGGACTGACGGTGGATGGAGACTTGTTTGTGGCTTGCAATGAGTGTGGATTCCCTGTGTGCAGGCCTTGCTATGAGTATGAGAGAAGAGAAGGCTCTCAGAACTGCCCTCAGTGCAAAACTAGATACAAGCGTCTCAAAGGAAGCCCCAGGGTAGAGGGAGATGATGATGAAGAGGATGTGGATGATATTGAGCATGAATTTAACATGAATGAAGATGATCAACACAATAAGGGTATCAAAAACAATGAGCAAATCGCCGAAGCAATGCTGCATGGAAAGATGAGCTACGGAAGAGGACCAGATGATGAGGAGAGTTCCCACTTCCCACCTGTGATTGCTGGTGTCAGATCCCGCCCGGTTAGCGGCGACCTCTCATACTTATCTCATGGTTATGGGGATCAGCCTTCTTCATTGCATAAACGAGTTCATCCATATCCAGCTTCTGAGCCTGGCAGTGAAAAATGGGATGACAGGAAAGATGGAGGGTGGAAAGAAAGAATGGATGATTGGAAATTGCAGCAAGGCAACCTGGGAGGGCCTGAACCTGATGACATGAACGACGCAGACATGTCAATGATTGATGAAGCAAGGCAGCCACTGTCAAGGAAAGTATCAATTGCATCTAGCAAGATCAACCCTTATAGAATGATCATTGTAGCTCGGCTGTTTATATTGGCTGCATTCCTCCGTTATAGACTTATGAATCCGGTTCATGAAGCACTTGGTCTCTGGTTAACTTCTGTCATTTGTGAAATATGGTTTGCAATTTCATGGATCCTCGATCAGTTCCCTAAGTGGTACCCTATTGAGCGTGAGACCTACCTTGATCGCCTTTCACTCAGGTATGAGAGGGAGGGTGAACCAAATATGCTCTCCCCTGTGGATGTATTTGTGAGTACTGTGGATCCCATGAAGGAACCTCCCCTTAATACAGCAAATACAGTCCTTTCTATCTTGGCCATGGACTATCCTGTTGAGAAAATCTCATGCTACATTTCTGATGATGGAGCTTCCATGCTAACCTTTGAGGCCTTGTCCGAAACAGCAGAATTTGCAAGGAAATGGGTACCCTTTTGCAAGAAATTTTCTATTGAGCCTCGAGCCCCTGAGATGTACTTCTGTGAGAAGATTGATTATCTCAAGGACAAAGTCCAGCCAACATTTGTCAAGGAGCGTCGAGCCATGAAGAGAGAATATGAAGAGTTCAAGGTTAGGGTAAATGCTCTTGTGGCCAAAGCCACAAAGATTCCTCCAGAAGGGTGGATAATGCAAGATGGGACACCATGGCCTGGAAACAATACCAAGGATCACCCTGGTATGATTCAGGTCTTTCTCGGTCACAGTGGAGGCCTTGATACTGAAGGAAATGAGCTCCCTCGTCTTGTATATGTGTCTCGTGAGAAGAGGCCTGGCTTTTCACATCACAAGAAGGCTGGTGCCATGAATGCCTTGGTCCGCGTCTCTGGAGTGCTCACCAATGCTCCTTTCATGCTCAACTTGGATTGTGATCACTATGTTAACAACAGTAAGGCTGCAAGAGAGGCCATGTGCTTCTTGATGGACCCTCAAATTGGAAGGAAGGTTTGCTACGTCCAGTTTCCTCAAAGATTTGATGGCATTGATAGGAATGATCGTTATGCCAACAGGAACACAGTCTTCTTTGATATTAACATGAAAGGTCTGGATGGAATCCAAGGTCCAGTTTATGTGGGAACAGGATGTGTTTTCAGGAGGCAAGCTTTGTATGGATATAATCCTCCAAAGGGTGCTAAGCGCCCAAAGATGGTAAGCTGTGATTGCTGCCCATGCTTTGGACGCCGCAAGAAGCTTCCCAAGTACTCCAAGAATGATGCAAATGGAGATGGTGCAAACCTCCAACTACAAGGAATGGATGATGACAAAGAGGTATTGATGTCCCAAATGAATTTCGAAAAGAAATTCGGACAGTCAGCTATTTTCGTGACTTCAACTTTAATGGAACAAGGTGGTGTGCCTCCTTCCTCAAGCCCTGCGGCCATGCTTAAGGAAGCCATTCATGTTATCAGTTGTGGTTATGAAGACAAAACTGAATGGGGAATTGAGCTGGGTTGGATTTATGGATCTATCACAGAGGATATCTTGACAGGGTTTAAAATGCATTGCCGTGGTTGGAGGTCAATTTACTGTATGCCCAAGAGACCAGCATTCAAGGGTACAGCTCCCATCAACTTGTCAGATCGGCTCAACCAGGTTCTTCGTTGGGCACTAGGTTCCATTGAGATTTTCTTCAGTCGCCACAGTCCTCTCTTGTATGGCTACAAGGGAGGAAAGCTCAAATGGCTTGAGAGATTTGCTTATATCAACACTACTGTCTACCCTTTCACCTCTCTTCCTCTTCTTGCCTATTGTATCCTCCCTGCCGTCTGCTTGCTCACCGATAAATTCATCATGCCACCGATAAGCACTTTCGCAAGTCTCTTCTTCATTGCTTTGTTCATTTCAATCTTCGGCACGGGCATTCTTGAGCTGAGATGGAGTGGAGTGAGTATTGAAGAATGGTGGAGAAATGAGCAATTCTGGGTGATTGGTGGTGTGTCAGCTCATCTCTTTGCTGTTATCCAAGGTCTCCTGAAAGTTTTGGCTGGAATTGACACCAGCTTCACTGTCACAGCCAAGTCTTCAGATGATGAGGATTTCGGAGAGTTGTACGCCTTTAAATGGACAACTCTACTAATCCCTCCAACTACTATCTTGGTCATTAACCTTGTTGGAGTAGTCGCTGGTATTTCAGATGCTATAAACAACGGGTACGAATCATGGGGACCTCTATTTGGAAAGCTCTTCTTTGCCTTCTGGGTGATTGTCCATCTATATCCATTCCTTAAAGGTCTGATGGGGAGGCAGAACCGTACGCCTACAATTGTTGTCATATGGTCAGTGCTCCTGGCTTCTATATTCTCCTTACTCTGGGTTCGAATCGACCCATTTGTGATGAAAACCAAGGGACCTACCACAAAGCAATGTGGAATCAATTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009507 GO:0009536 GO:0009664 GO:0009832 GO:0009833 GO:0009834 GO:0009987 GO:0010330 GO:0010393 GO:0010395 GO:0010400 GO:0012505 GO:0016020 GO:0016043 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0017144 GO:0022402 GO:0030243 GO:0030244 GO:0032991 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0045488 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0052546 GO:0061640 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1902494 GO:1903047 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

1050

Amino Acids

118.57

Weight (kDa)

6.24

Isoelectric Point (pI)

41.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	27 - 104	1.7e-42	Zinc-binding RING-finger
Cellulose_synt	PF03552	338 - 1043	0.0	Cellulose synthase
Glyco_trans_2_3	PF13632	736 - 844	6e-06	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17420
fragaria_vesca	FvH4_1g00670
malus_domestica	MD02G1005600.v1.1 MD15G1150200.v1.1 MD15G1150300.v1.1
prunus_persica	Prupe.7G265400_v2.0.a1
pyrus_communis	pycom02g00450 pycom15g13420 pycom15g13430 pycom15g13440
rosa_chinensis	RchiOBHm_Chr2g0085301 RchiOBHm_Chr2g0175181
rosa_laevigata	RLG00000015676
rosa_multiflora	Rmu_sc0008510.1_g000012
rosa_rugosa	Rorug01G0459400
rosa_samantha	Rh2AG007700 Rh2BG008400 Rh2CG009100 Rh2DG009600
rosa_wichuraiana	Rw2G000740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	930, 1198
AccB1I	GGYRCC	3 cut(s)	930, 1198, 1568
AccB7I	CCANNNNNTGG	2 cut(s)	1421, 1943
AccI	GTMKAC	1 cut(s)	2484
AccII	CGCG	1 cut(s)	1590
AciI	CCGC	6 cut(s)	40, 484, 495, 1588, 1951, 2144
AclWI	GGATC	8 cut(s)	474, 537, 901, 914, 1031, 1044, 1446, 2239
AcoI	YGGCCR	4 cut(s)	100, 1089, 1362, 2145
AcsI	RAATTY	6 cut(s)	329, 1181, 1214, 2056, 2069, 2552
AcuI	CTGAAG	3 cut(s)	1512, 2383, 2775
AcyI	GRCGYC	1 cut(s)	1948
AfaI	GTAC	9 cut(s)	932, 1030, 1200, 1247, 1970, 2326, 2819, 2921, 3022
AflII	CTTAAG	1 cut(s)	2153
AflIII	ACRYGT	1 cut(s)	699
AgsI	TTSAA	5 cut(s)	1339, 2100, 2320, 2613, 2663
AjnI	CCWGG	9 cut(s)	102, 278, 580, 660, 1420, 1444, 1540, 2358, 3054
AjuI	GAANNNNNNNTTGG	4 cut(s)	622, 654, 1601, 1633
Alw21I	GWGCWC	4 cut(s)	78, 1506, 1605, 3054
AlwI	GGATC	8 cut(s)	474, 537, 901, 914, 1031, 1044, 1446, 2239
AlwNI	CAGNNNCTG	2 cut(s)	575, 730
Ama87I	CYCGRG	1 cut(s)	1230
ApeKI	GCWGC	6 cut(s)	400, 649, 724, 809, 1664, 1932
ApoI	RAATTY	6 cut(s)	329, 1181, 1214, 2056, 2069, 2552
ArsI	GACNNNNNNTTYG	2 cut(s)	39, 71
Asp700I	GAANNNNTTC	1 cut(s)	2163
Asp718I	GGTACC	2 cut(s)	930, 1198
AspLEI	GCGC	2 cut(s)	14, 1908
AspS9I	GGNCC	7 cut(s)	428, 668, 1585, 1693, 1829, 2933, 3116
AsuC2I	CCSGG	1 cut(s)	488
AsuHPI	GGTGA	7 cut(s)	1001, 1433, 1597, 2485, 2536, 2704, 2980
AsuII	TTCGAA	2 cut(s)	2061, 3085
AvaI	CYCGRG	1 cut(s)	1230
AvaII	GGWCC	6 cut(s)	428, 1585, 1693, 1829, 2933, 3116
BaeGI	GKGCMC	1 cut(s)	2377
BaeI	ACNNNNGTAYC	2 cut(s)	247, 280
BalI	TGGCCA	2 cut(s)	1091, 1364
BamHI	GGATCC	2 cut(s)	906, 1036
BanI	GGYRCC	3 cut(s)	930, 1198, 1568
BanII	GRGCYC	2 cut(s)	1237, 1506
BarI	GAAGNNNNNNTAC	2 cut(s)	1703, 1735
BauI	CACGAG	2 cut(s)	50, 1527
BbsI	GAAGAC	3 cut(s)	1780, 2196, 2781
Bbv12I	GWGCWC	4 cut(s)	78, 1506, 1605, 3054
BbvI	GCAGC	6 cut(s)	387, 661, 736, 796, 1651, 1919
BceAI	ACGGC	3 cut(s)	115, 2259, 2516
BcgI	CGANNNNNNTGC	2 cut(s)	31, 65
BciT130I	CCWGG	9 cut(s)	104, 280, 582, 662, 1422, 1446, 1542, 2360, 3056
BciVI	GTATCC	1 cut(s)	2531
BclI	TGATCA	3 cut(s)	349, 780, 1639
BcnI	CCSGG	1 cut(s)	488
BfaI	CTAG	3 cut(s)	252, 756, 2378
BfoI	RGCGCY	2 cut(s)	15, 1909
BfrI	CTTAAG	1 cut(s)	2153
BfuI	GTATCC	1 cut(s)	2531
BisI	GCNGC	9 cut(s)	401, 496, 650, 725, 810, 1665, 1933, 1951, 2145
BlpI	GCTNAGC	1 cut(s)	1902
BlsI	GCNGC	9 cut(s)	402, 497, 651, 726, 811, 1666, 1934, 1952, 2146
BmcAI	AGTACT	2 cut(s)	1030, 1970
Bme18I	GGWCC	6 cut(s)	428, 1585, 1693, 1829, 2933, 3116
BmeT110I	CYCGRG	1 cut(s)	1230
BmgT120I	GGNCC	7 cut(s)	428, 668, 1585, 1693, 1829, 2933, 3116
BmsI	GCATC	3 cut(s)	761, 1972, 2893
BpiI	GAAGAC	3 cut(s)	1780, 2196, 2781
BplI	GAGNNNNNCTC	4 cut(s)	1100, 1132, 2427, 2459
BpmI	CTGGAG	2 cut(s)	1368, 1617
Bpu1102I	GCTNAGC	1 cut(s)	1902
Bpu14I	TTCGAA	2 cut(s)	2061, 3085
BpuEI	CTTGAG	4 cut(s)	1256, 2119, 2474, 2654
BpuMI	CCSGG	1 cut(s)	488
BsaBI	GATNNNNATC	1 cut(s)	1638
BsaHI	GRCGYC	1 cut(s)	1948
BsaI	GGTCTC	4 cut(s)	863, 941, 2302, 2741
BsaWI	WCCGGW	1 cut(s)	838
BsaXI	ACNNNNNCTCC	4 cut(s)	114, 144, 1597, 1627
Bse118I	RCCGGY	1 cut(s)	26
Bse1I	ACTGG	2 cut(s)	1726, 1832
Bse3DI	GCAATG	6 cut(s)	175, 402, 542, 2269, 2595, 3137
Bse8I	GATNNNNATC	1 cut(s)	1638
BseBI	CCWGG	9 cut(s)	104, 280, 582, 662, 1422, 1446, 1542, 2360, 3056
BseJI	GATNNNNATC	1 cut(s)	1638
BseMI	GCAATG	6 cut(s)	175, 402, 542, 2269, 2595, 3137
BseMII	CTCAG	6 cut(s)	242, 254, 567, 985, 1230, 2630
BseNI	ACTGG	2 cut(s)	1726, 1832
BseRI	GAGGAG	1 cut(s)	455
BseSI	GKGCMC	1 cut(s)	2377
BseXI	GCAGC	6 cut(s)	387, 661, 736, 796, 1651, 1919
BseYI	CCCAGC	1 cut(s)	2215
BsgI	GTGCAG	1 cut(s)	211
Bsh1236I	CGCG	1 cut(s)	1590
BshNI	GGYRCC	3 cut(s)	930, 1198, 1568
BsiHKAI	GWGCWC	4 cut(s)	78, 1506, 1605, 3054
BsiHKCI	CYCGRG	1 cut(s)	1230
BsiSI	CCGG	4 cut(s)	15, 27, 488, 839
BsiWI	CGTACG	1 cut(s)	3020
BslFI	GGGAC	4 cut(s)	1423, 2032, 2946, 3129
BsmBI	CGTCTC	3 cut(s)	117, 269, 1597
BsmFI	GGGAC	4 cut(s)	1423, 2032, 2946, 3129
BsmI	GAATGC	4 cut(s)	812, 1582, 2315, 2628
Bso31I	GGTCTC	4 cut(s)	863, 941, 2302, 2741
BsoBI	CYCGRG	1 cut(s)	1230
Bsp119I	TTCGAA	2 cut(s)	2061, 3085
Bsp1286I	GDGCHC	6 cut(s)	78, 1237, 1506, 1605, 2377, 3054
Bsp1720I	GCTNAGC	1 cut(s)	1902
Bsp19I	CCATGG	2 cut(s)	1092, 1415
BspACI	CCGC	6 cut(s)	40, 484, 495, 1588, 1951, 2144
BspCNI	CTCAG	6 cut(s)	241, 253, 568, 984, 1231, 2631
BspFNI	CGCG	1 cut(s)	1590
BspHI	TCATGA	1 cut(s)	844
BspPI	GGATC	8 cut(s)	474, 537, 901, 914, 1031, 1044, 1446, 2239
BspQI	GCTCTTC	2 cut(s)	66, 2957
BspT104I	TTCGAA	2 cut(s)	2061, 3085
BspT107I	GGYRCC	3 cut(s)	930, 1198, 1568
BspTI	CTTAAG	1 cut(s)	2153
BspTNI	GGTCTC	4 cut(s)	863, 941, 2302, 2741
BsrDI	GCAATG	6 cut(s)	175, 402, 542, 2269, 2595, 3137
BsrFI	RCCGGY	1 cut(s)	26
BsrI	ACTGG	2 cut(s)	1726, 1832
BssAI	RCCGGY	1 cut(s)	26
BssNI	GRCGYC	1 cut(s)	1948
BssSI	CACGAG	2 cut(s)	50, 1527
BssT1I	CCWWGG	7 cut(s)	1092, 1415, 1434, 1581, 1825, 2731, 3111
Bst2BI	CACGAG	2 cut(s)	50, 1527
Bst2UI	CCWGG	9 cut(s)	104, 280, 582, 662, 1422, 1446, 1542, 2360, 3056
BstACI	GRCGYC	1 cut(s)	1948
BstAFI	CTTAAG	1 cut(s)	2153
BstAPI	GCANNNNNTGC	2 cut(s)	198, 1184
BstBI	TTCGAA	2 cut(s)	2061, 3085
BstC8I	GCNNGC	5 cut(s)	10, 166, 194, 1869, 2540
BstDEI	CTNAG	8 cut(s)	228, 240, 576, 924, 971, 1239, 1902, 2639
BstDSI	CCRYGG	3 cut(s)	1092, 1415, 2275
BstENI	CCTNNNNNAGG	1 cut(s)	1386
BstFNI	CGCG	1 cut(s)	1590
BstH2I	RGCGCY	2 cut(s)	15, 1909
BstHHI	GCGC	2 cut(s)	14, 1908
BstNI	CCWGG	9 cut(s)	104, 280, 582, 662, 1422, 1446, 1542, 2360, 3056
BstNSI	RCATGY	1 cut(s)	703
BstSLI	GKGCMC	1 cut(s)	2377
BstUI	CGCG	1 cut(s)	1590
BstV1I	GCAGC	6 cut(s)	387, 661, 736, 796, 1651, 1919
BstV2I	GAAGAC	3 cut(s)	1780, 2196, 2781
BstX2I	RGATCY	4 cut(s)	479, 906, 1036, 2231
BstXI	CCANNNNNNTGG	1 cut(s)	1392
BstYI	RGATCY	4 cut(s)	479, 906, 1036, 2231
BsuI	GTATCC	1 cut(s)	2531
BtgI	CCRYGG	3 cut(s)	1092, 1415, 2275
BtsI	GCAGTG	1 cut(s)	592
BtsIMutI	CAGTG	6 cut(s)	248, 592, 728, 1480, 2772, 3054
Cac8I	GCNNGC	5 cut(s)	10, 166, 194, 1869, 2540
CaiI	CAGNNNCTG	2 cut(s)	575, 730
CciI	TCATGA	1 cut(s)	844
CfoI	GCGC	2 cut(s)	14, 1908
Cfr10I	RCCGGY	1 cut(s)	26
Cfr13I	GGNCC	7 cut(s)	428, 668, 1585, 1693, 1829, 2933, 3116
CseI	GACGC	5 cut(s)	251, 701, 1295, 1579, 1956
CsiI	ACCWGGT	1 cut(s)	2358
Csp6I	GTAC	9 cut(s)	931, 1029, 1199, 1246, 1969, 2325, 2818, 2920, 3021
CspCI	CAANNNNNGTGG	2 cut(s)	157, 192
CviQI	GTAC	9 cut(s)	931, 1029, 1199, 1246, 1969, 2325, 2818, 2920, 3021
DdeI	CTNAG	8 cut(s)	228, 240, 576, 924, 971, 1239, 1902, 2639
DraI	TTTAAA	2 cut(s)	2263, 2827
EaeI	YGGCCR	4 cut(s)	100, 1089, 1362, 2145
Ecl136II	GAGCTC	1 cut(s)	1504
Eco130I	CCWWGG	7 cut(s)	1092, 1415, 1434, 1581, 1825, 2731, 3111
Eco147I	AGGCCT	4 cut(s)	196, 1163, 1482, 1540
Eco24I	GRGCYC	2 cut(s)	1237, 1506
Eco31I	GGTCTC	4 cut(s)	863, 941, 2302, 2741
Eco32I	GATATC	1 cut(s)	2248
Eco47I	GGWCC	6 cut(s)	428, 1585, 1693, 1829, 2933, 3116
Eco53kI	GAGCTC	1 cut(s)	1504
Eco57I	CTGAAG	3 cut(s)	1512, 2383, 2775
Eco88I	CYCGRG	1 cut(s)	1230
EcoICRI	GAGCTC	1 cut(s)	1504
EcoNI	CCTNNNNNAGG	1 cut(s)	1386
EcoO109I	RGGNCCY	3 cut(s)	668, 2933, 3116
EcoRII	CCWGG	9 cut(s)	102, 278, 580, 660, 1420, 1444, 1540, 2358, 3054
EcoRV	GATATC	1 cut(s)	2248
EcoT14I	CCWWGG	7 cut(s)	1092, 1415, 1434, 1581, 1825, 2731, 3111
EcoT22I	ATGCAT	1 cut(s)	2271
EcoT38I	GRGCYC	2 cut(s)	1237, 1506
ErhI	CCWWGG	7 cut(s)	1092, 1415, 1434, 1581, 1825, 2731, 3111
Esp3I	CGTCTC	3 cut(s)	117, 269, 1597
FalI	AAGNNNNNCTT	2 cut(s)	2939, 2971
FaqI	GGGAC	4 cut(s)	1423, 2032, 2946, 3129
FauI	CCCGC	1 cut(s)	491
FauNDI	CATATG	1 cut(s)	3041
FbaI	TGATCA	3 cut(s)	349, 780, 1639
FblI	GTMKAC	1 cut(s)	2484
Fnu4HI	GCNGC	9 cut(s)	401, 496, 650, 725, 810, 1665, 1933, 1951, 2145
FriOI	GRGCYC	2 cut(s)	1237, 1506
Fsp4HI	GCNGC	9 cut(s)	401, 496, 650, 725, 810, 1665, 1933, 1951, 2145
FspBI	CTAG	3 cut(s)	252, 756, 2378
GlaI	GCGC	2 cut(s)	13, 1907
GluI	GCNGC	9 cut(s)	401, 496, 650, 725, 810, 1665, 1933, 1951, 2145
GsaI	CCCAGC	1 cut(s)	2219
GsuI	CTGGAG	2 cut(s)	1368, 1617
HaeII	RGCGCY	2 cut(s)	15, 1909
HapII	CCGG	4 cut(s)	15, 27, 488, 839
HgaI	GACGC	5 cut(s)	251, 701, 1295, 1579, 1956
HhaI	GCGC	2 cut(s)	14, 1908
Hin1I	GRCGYC	1 cut(s)	1948
Hin6I	GCGC	2 cut(s)	12, 1906
HinP1I	GCGC	2 cut(s)	12, 1906
HincII	GTYRAC	2 cut(s)	867, 1651
HindII	GTYRAC	2 cut(s)	867, 1651
HindIII	AAGCTT	2 cut(s)	1869, 1958
HinfI	GANTC	8 cut(s)	180, 835, 1378, 1453, 1821, 2924, 3087, 3138
HpaI	GTTAAC	2 cut(s)	867, 1651
HpaII	CCGG	4 cut(s)	15, 27, 488, 839
HphI	GGTGA	7 cut(s)	1001, 1433, 1597, 2485, 2536, 2704, 2980
Hpy166II	GTNNAC	4 cut(s)	867, 992, 1651, 2485
Hpy8I	GTNNAC	4 cut(s)	867, 992, 1651, 2485
Hpy99I	CGWCG	2 cut(s)	695, 1311
HpyCH4IV	ACGT	1 cut(s)	1722
HpyF3I	CTNAG	8 cut(s)	228, 240, 576, 924, 971, 1239, 1902, 2639
HpySE526I	ACGT	1 cut(s)	1722
Hsp92I	GRCGYC	1 cut(s)	1948
HspAI	GCGC	2 cut(s)	12, 1906
KpnI	GGTACC	2 cut(s)	934, 1202
Ksp22I	TGATCA	3 cut(s)	349, 780, 1639
KspAI	GTTAAC	2 cut(s)	867, 1651
LguI	GCTCTTC	2 cut(s)	66, 2957
LmnI	GCTCC	6 cut(s)	1139, 1303, 1509, 1618, 2335, 3057
Lsp1109I	GCAGC	6 cut(s)	387, 661, 736, 796, 1651, 1919
LweI	GCATC	3 cut(s)	761, 1972, 2893
MabI	ACCWGGT	1 cut(s)	2358
MaeI	CTAG	3 cut(s)	252, 756, 2378
MaeII	ACGT	1 cut(s)	1722
MaeIII	GTNAC	4 cut(s)	65, 1469, 2092, 2776
MfeI	CAATTG	3 cut(s)	747, 3030, 3142
MflI	RGATCY	4 cut(s)	479, 906, 1036, 2231
MhlI	GDGCHC	6 cut(s)	78, 1237, 1506, 1605, 2377, 3054
MlsI	TGGCCA	2 cut(s)	1091, 1364
MluNI	TGGCCA	2 cut(s)	1091, 1364
MmeI	TCCRAC	6 cut(s)	112, 2032, 2201, 2261, 2860, 2876
Mox20I	TGGCCA	2 cut(s)	1091, 1364
Mph1103I	ATGCAT	1 cut(s)	2271
MroXI	GAANNNNTTC	1 cut(s)	2163
MscI	TGGCCA	2 cut(s)	1091, 1364
MslI	CAYNNNNRTG	3 cut(s)	522, 704, 2274
Msp20I	TGGCCA	2 cut(s)	1091, 1364
MspCI	CTTAAG	1 cut(s)	2153
MspI	CCGG	4 cut(s)	15, 27, 488, 839
MunI	CAATTG	3 cut(s)	747, 3030, 3142
Mva1269I	GAATGC	4 cut(s)	812, 1582, 2315, 2628
MvaI	CCWGG	9 cut(s)	104, 280, 582, 662, 1422, 1446, 1542, 2360, 3056
MvnI	CGCG	1 cut(s)	1590
NciI	CCSGG	1 cut(s)	488
NcoI	CCATGG	2 cut(s)	1092, 1415
NdeI	CATATG	1 cut(s)	3041
NmeAIII	GCCGAG	1 cut(s)	772
NmuCI	GTSAC	4 cut(s)	65, 1469, 2092, 2776
NsiI	ATGCAT	1 cut(s)	2271
NspI	RCATGY	1 cut(s)	703
NspV	TTCGAA	2 cut(s)	2061, 3085
PaeR7I	CTCGAG	1 cut(s)	1230
PagI	TCATGA	1 cut(s)	844
PasI	CCCWGGG	1 cut(s)	279
PceI	AGGCCT	4 cut(s)	196, 1163, 1482, 1540
PciI	ACATGT	1 cut(s)	699
PciSI	GCTCTTC	2 cut(s)	66, 2957
PctI	GAATGC	4 cut(s)	812, 1582, 2315, 2628
PdmI	GAANNNNTTC	1 cut(s)	2163
PfeI	GAWTC	8 cut(s)	180, 835, 1378, 1453, 1821, 2924, 3087, 3138
Pfl23II	CGTACG	1 cut(s)	3020
PflFI	GACNNNGTC	1 cut(s)	1280
PflMI	CCANNNNNTGG	2 cut(s)	1421, 1943
PkrI	GCNGC	9 cut(s)	402, 497, 651, 726, 811, 1666, 1934, 1952, 2146
PpuMI	RGGWCCY	2 cut(s)	2933, 3116
PscI	ACATGT	1 cut(s)	699
Psp124BI	GAGCTC	1 cut(s)	1506
Psp5II	RGGWCCY	2 cut(s)	2933, 3116
Psp6I	CCWGG	9 cut(s)	102, 278, 580, 660, 1420, 1444, 1540, 2358, 3054
PspFI	CCCAGC	1 cut(s)	2215
PspGI	CCWGG	9 cut(s)	102, 278, 580, 660, 1420, 1444, 1540, 2358, 3054
PspLI	CGTACG	1 cut(s)	3020
PspPI	GGNCC	7 cut(s)	428, 668, 1585, 1693, 1829, 2933, 3116
PspPPI	RGGWCCY	2 cut(s)	2933, 3116
PspXI	VCTCGAGB	1 cut(s)	1230
PstNI	CAGNNNCTG	2 cut(s)	575, 730
PsuI	RGATCY	4 cut(s)	479, 906, 1036, 2231
PsyI	GACNNNGTC	1 cut(s)	1280
RsaI	GTAC	9 cut(s)	932, 1030, 1200, 1247, 1970, 2326, 2819, 2921, 3022
RsaNI	GTAC	9 cut(s)	931, 1029, 1199, 1246, 1969, 2325, 2818, 2920, 3021
RseI	CAYNNNNRTG	3 cut(s)	522, 704, 2274
SacI	GAGCTC	1 cut(s)	1506
SapI	GCTCTTC	2 cut(s)	66, 2957
SatI	GCNGC	9 cut(s)	401, 496, 650, 725, 810, 1665, 1933, 1951, 2145
Sau96I	GGNCC	7 cut(s)	428, 668, 1585, 1693, 1829, 2933, 3116
ScaI	AGTACT	2 cut(s)	1030, 1970
SduI	GDGCHC	6 cut(s)	78, 1237, 1506, 1605, 2377, 3054
SexAI	ACCWGGT	1 cut(s)	2358
SfaNI	GCATC	3 cut(s)	761, 1972, 2893
Sfr274I	CTCGAG	1 cut(s)	1230
SfuI	TTCGAA	2 cut(s)	2061, 3085
SinI	GGWCC	6 cut(s)	428, 1585, 1693, 1829, 2933, 3116
SlaI	CTCGAG	1 cut(s)	1230
SmiMI	CAYNNNNRTG	3 cut(s)	522, 704, 2274
SmlI	CTYRAG	6 cut(s)	1230, 1271, 2134, 2153, 2453, 2633
SmoI	CTYRAG	6 cut(s)	1230, 1271, 2134, 2153, 2453, 2633
SseBI	AGGCCT	4 cut(s)	196, 1163, 1482, 1540
SsiI	CCGC	6 cut(s)	40, 484, 495, 1588, 1951, 2144
SspMI	CTAG	3 cut(s)	252, 756, 2378
SstI	GAGCTC	1 cut(s)	1506
StuI	AGGCCT	4 cut(s)	196, 1163, 1482, 1540
StyI	CCWWGG	7 cut(s)	1092, 1415, 1434, 1581, 1825, 2731, 3111
TaiI	ACGT	1 cut(s)	1725
TaqI	TCGA	6 cut(s)	912, 1231, 1309, 2061, 3085, 3090
TaqII	GACCGA	1 cut(s)	1457
TatI	WGTACW	3 cut(s)	1028, 1245, 1968
TauI	GCSGC	3 cut(s)	498, 1953, 2147
TfiI	GAWTC	8 cut(s)	180, 835, 1378, 1453, 1821, 2924, 3087, 3138
TscAI	CASTG	6 cut(s)	248, 592, 735, 1480, 2779, 3054
TseFI	GTSAC	4 cut(s)	65, 1469, 2092, 2776
TseI	GCWGC	6 cut(s)	400, 649, 724, 809, 1664, 1932
Tsp45I	GTSAC	4 cut(s)	65, 1469, 2092, 2776
TspGWI	ACGGA	2 cut(s)	435, 809
TspRI	CASTG	6 cut(s)	248, 592, 735, 1480, 2779, 3054
Tth111I	GACNNNGTC	1 cut(s)	1280
Van91I	CCANNNNNTGG	2 cut(s)	1421, 1943
Vha464I	CTTAAG	1 cut(s)	2153
VpaK11BI	GGWCC	6 cut(s)	428, 1585, 1693, 1829, 2933, 3116
XagI	CCTNNNNNAGG	1 cut(s)	1386
XapI	RAATTY	6 cut(s)	329, 1181, 1214, 2056, 2069, 2552
XceI	RCATGY	1 cut(s)	703
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1579
XhoI	CTCGAG	1 cut(s)	1230
XmiI	GTMKAC	1 cut(s)	2484
XmnI	GAANNNNTTC	1 cut(s)	2163
XspI	CTAG	3 cut(s)	252, 756, 2378
ZrmI	AGTACT	2 cut(s)	1030, 1970
Zsp2I	ATGCAT	1 cut(s)	2271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.