AT5G17490

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0010801
Physical Location & Seq
Reverse (-)
5763989 .. 5766246
2258 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G17490.1

Sequence Viewer

Length: 1572 bp
ATGAAACGAAGCCATCAAGAAACGTCTGTAGAAGAAGAAGCTCCTTCAATGGTGGAGAAGTTAGAAAATGGTTGTGGTGGTGGTGGAGACGATAACATGGACGAGTTTCTTGCTGTTTTGGGTTACAAGGTTCGATCTTCAGACATGGCAGATGTTGCACAGAAGCTTGAACAGCTTGAAATGGTCTTGTCCAATGATATTGCCTCTTCTAGTAATGCCTTCAATGACACCGTTCATTACAATCCTTCTGATCTCTCCGGTTGGGCTCAGAGCATGCTCTCGGATCTTAATTACTACCCGGATCTTGACCCGAACCGGATTTGCGATCTGAGACCAATCACAGACGACGATGAGTGTTGCAGTAGCAATAGTAACAGCAACAAGAGGATTCGACTCGGTCCTTGGTGTGACTCAGTGACCAGCGAGTCAACTCGTTCCGTGGTGCTTATCGAGGAGACAGGAGTTAGACTCGTTCAGGCGCTAGTGGCCTGCGCCGAGGCGGTTCAGCTGGAGAATCTGAGCCTCGCGGATGCTCTCGTCAAGCGCGTGGGATTACTCGCGGCTTCTCAAGCCGGAGCCATGGGGAAAGTCGCTACCTACTTCGCCGAAGCCCTAGCTCGTCGAATTTACCGGATTCATCCTTCCGCCGCCGCCATTGATCCTTCCTTCGAAGAGATTCTTCAGATGAACTTCTACGACTCGTGTCCCTACCTGAAATTCGCTCATTTCACGGCCAATCAGGCGATTCTAGAAGCTGTTACGACGTCGCGTGTCGTACACGTAATCGATCTAGGGCTTAATCAAGGTATGCAATGGCCGGCGTTAATGCAAGCCTTAGCTCTCCGACCCGGTGGTCCACCGTCGTTTCGTCTCACCGGCGTTGGGAATCCGTCGAATCGAGAAGGGATTCAAGAGTTAGGTTGGAAGCTAGCTCAGCTGGCTCAAGCCATCGGCGTCGAATTCAAATTCAATGGTCTAACGACGGAGAGGTTATCCGATTTAGAACCGGATATGTTCGAGACCCGAACCGAATCGGAGACTCTAGTGGTTAATTCGGTTTTCGAGCTTCACCCGGTTTTATCCCAACCCGGTTCGATCGAAAAGCTGTTAGCGACGGTTAAGGCGGTTAAACCGGGTCTCGTAACAGTGGTGGAACAAGAAGCGAACCATAACGGTGACGTTTTCTTAGACCGGTTTAACGAAGCGCTTCACTATTACTCGAGCTTGTTCGACTCGCTCGAAGATGGTGTTGTGATACCGAGTCAAGACCGAGTCATGTCGGAGGTTTACTTAGGGAGACAGATATTGAACTTGGTGGCGACGGAAGGAAGCGATAGGATCGAGCGACACGAGACGCTGGCTCAGTGGCGAAAACGTATGGGATCCGCCGGGTTTGACCCGGTTAACCTCGGATCAGACGCGTTTAAGCAAGCGAGTTTGCTATTGGCGTTATCTGGCGGTGGAGATGGATACAGAGTGGAGGAGAACGACGGAAGCCTAATGCTTGCGTGGCAAACGAAACCTCTAATCGCTGCATCGGCGTGGAAACTAGCGGCGGAGTTGCGGCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000910 GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006808 GO:0006810 GO:0006950 GO:0006970 GO:0006972 GO:0007049 GO:0007154 GO:0007165 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009739 GO:0009740 GO:0009751 GO:0009753 GO:0009755 GO:0009863 GO:0009867 GO:0009889 GO:0009892 GO:0009893 GO:0009894 GO:0009937 GO:0009938 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010033 GO:0010187 GO:0010218 GO:0010232 GO:0010233 GO:0010453 GO:0010454 GO:0010468 GO:0010476 GO:0010556 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010646 GO:0010648 GO:0014070 GO:0019219 GO:0019222 GO:0022402 GO:0022414 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031326 GO:0032501 GO:0032870 GO:0033206 GO:0033993 GO:0035690 GO:0040008 GO:0042176 GO:0042221 GO:0042493 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045595 GO:0045596 GO:0045926 GO:0046677 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048638 GO:0048640 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0051246 GO:0051252 GO:0051301 GO:0051321 GO:0051716 GO:0060255 GO:0061640 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071370 GO:0071395 GO:0071396 GO:0071407 GO:0071446 GO:0071495 GO:0080050 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1900032 GO:1900033 GO:1900140 GO:1901363 GO:1901700 GO:1901701 GO:1903046 GO:1903506 GO:1905613 GO:1905614 GO:1905622 GO:2000024 GO:2000026 GO:2000033 GO:2000034 GO:2000112 GO:2000241 GO:2000377 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
DELLA GRAS

Protein Analysis

523

Amino Acids

57.33

Weight (kDa)

4.76

Isoelectric Point (pI)

46.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DELLA PF12041 34 - 100 1.3e-32 Transcriptional regulator DELLA protein N terminal
GRAS PF03514 157 - 516 2.2e-130 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 424, 852
AatII GACGTC 1 cut(s) 767
AccII CGCG 5 cut(s) 527, 546, 560, 769, 1421
AclWI GGATC 7 cut(s) 291, 309, 653, 1346, 1377, 1390, 1420
AcoI YGGCCR 2 cut(s) 732, 815
AcsI RAATTY 4 cut(s) 624, 716, 959, 965
AcuI CTGAAG 2 cut(s) 123, 665
AcyI GRCGYC 2 cut(s) 764, 954
AfaI GTAC 1 cut(s) 777
AfeI AGCGCT 1 cut(s) 1206
AfiI CCNNNNNNNGG 1 cut(s) 882
AflIII ACRYGT 2 cut(s) 778, 1419
AgeI ACCGGT 1 cut(s) 1191
AgsI TTSAA 8 cut(s) 48, 170, 179, 223, 911, 964, 970, 1309
Alw26I GTCTC 9 cut(s) 81, 325, 449, 875, 1013, 1031, 1142, 1291, 1346
AlwI GGATC 7 cut(s) 291, 309, 653, 1346, 1377, 1390, 1420
Ama87I CYCGRG 1 cut(s) 1219
Aor51HI AGCGCT 1 cut(s) 1206
AoxI GGCC 3 cut(s) 486, 732, 815
ApeKI GCWGC 1 cut(s) 1532
ApoI RAATTY 4 cut(s) 624, 716, 959, 965
AsiGI ACCGGT 1 cut(s) 1191
Asp700I GAANNNNTTC 3 cut(s) 675, 906, 1206
AspLEI GCGC 4 cut(s) 481, 494, 546, 1207
AspS9I GGNCC 2 cut(s) 398, 854
AsuC2I CCSGG 7 cut(s) 299, 849, 1073, 1089, 1134, 1390, 1400
AsuHPI GGTGA 3 cut(s) 865, 1061, 1187
AsuII TTCGAA 1 cut(s) 669
AsuNHI GCTAGC 1 cut(s) 928
AvaI CYCGRG 1 cut(s) 1219
AvaII GGWCC 2 cut(s) 398, 854
BamHI GGATCC 1 cut(s) 1382
BanII GRGCYC 1 cut(s) 268
BauI CACGAG 2 cut(s) 700, 1349
BbvI GCAGC 1 cut(s) 1519
BccI CCATC 4 cut(s) 21, 956, 1238, 1460
BceAI ACGGC 1 cut(s) 747
BcgI CGANNNNNNTGC 2 cut(s) 92, 126
BciVI GTATCC 1 cut(s) 1463
BcnI CCSGG 7 cut(s) 299, 849, 1073, 1089, 1134, 1390, 1400
BcoDI GTCTC 9 cut(s) 81, 325, 449, 875, 1013, 1031, 1142, 1291, 1346
BfaI CTAG 8 cut(s) 210, 482, 614, 749, 791, 929, 1043, 1550
BfmI CTRYAG 1 cut(s) 27
BfoI RGCGCY 2 cut(s) 482, 1208
BfuI GTATCC 1 cut(s) 1463
BglI GCCNNNNNGGC 1 cut(s) 740
BisI GCNGC 6 cut(s) 561, 648, 651, 1533, 1554, 1565
BlpI GCTNAGC 1 cut(s) 933
BlsI GCNGC 6 cut(s) 562, 649, 652, 1534, 1555, 1566
Bme1390I CCNGG 7 cut(s) 299, 849, 1073, 1089, 1134, 1390, 1400
Bme18I GGWCC 2 cut(s) 398, 854
BmeT110I CYCGRG 1 cut(s) 1219
BmgT120I GGNCC 2 cut(s) 398, 854
BmiI GGNNCC 2 cut(s) 577, 1384
BmrFI CCNGG 7 cut(s) 299, 849, 1073, 1089, 1134, 1390, 1400
BmsI GCATC 2 cut(s) 520, 1544
BmtI GCTAGC 1 cut(s) 932
BoxI GACNNNNGTC 1 cut(s) 702
BplI GAGNNNNNCTC 2 cut(s) 453, 485
BpmI CTGGAG 1 cut(s) 530
Bpu10I CCTNAGC 1 cut(s) 835
Bpu1102I GCTNAGC 1 cut(s) 933
Bpu14I TTCGAA 1 cut(s) 669
BpuEI CTTGAG 2 cut(s) 552, 927
BpuMI CCSGG 7 cut(s) 299, 849, 1073, 1089, 1134, 1390, 1400
Bsa29I ATCGAT 1 cut(s) 786
BsaAI YACGTR 1 cut(s) 781
BsaHI GRCGYC 2 cut(s) 764, 954
BsaI GGTCTC 3 cut(s) 325, 1013, 1142
BsaJI CCNNGG 5 cut(s) 401, 438, 495, 579, 1408
BsaWI WCCGGW 5 cut(s) 257, 315, 630, 1006, 1191
Bsc4I CCNNNNNNNGG 1 cut(s) 882
Bse118I RCCGGY 3 cut(s) 817, 875, 1191
Bse3DI GCAATG 1 cut(s) 818
BseCI ATCGAT 1 cut(s) 786
BseDI CCNNGG 5 cut(s) 401, 438, 495, 579, 1408
BseGI GGATG 2 cut(s) 535, 637
BseLI CCNNNNNNNGG 1 cut(s) 882
BseMI GCAATG 1 cut(s) 818
BseMII CTCAG 6 cut(s) 281, 320, 426, 509, 947, 1376
BseRI GAGGAG 2 cut(s) 467, 1496
BseXI GCAGC 1 cut(s) 1519
Bsh1236I CGCG 5 cut(s) 527, 546, 560, 769, 1421
Bsh1285I CGRYCG 1 cut(s) 1098
BshFI GGCC 3 cut(s) 488, 734, 817
BshTI ACCGGT 1 cut(s) 1191
BshVI ATCGAT 1 cut(s) 786
BsiEI CGRYCG 1 cut(s) 1098
BsiHKCI CYCGRG 1 cut(s) 1219
BslFI GGGAC 1 cut(s) 690
BslI CCNNNNNNNGG 1 cut(s) 882
BsmAI GTCTC 9 cut(s) 81, 325, 449, 875, 1013, 1031, 1142, 1291, 1346
BsmBI CGTCTC 3 cut(s) 81, 875, 1346
BsmFI GGGAC 1 cut(s) 690
BsnI GGCC 3 cut(s) 488, 734, 817
Bso31I GGTCTC 3 cut(s) 325, 1013, 1142
BsoBI CYCGRG 1 cut(s) 1219
Bsp119I TTCGAA 1 cut(s) 669
Bsp1286I GDGCHC 1 cut(s) 268
Bsp1720I GCTNAGC 1 cut(s) 933
Bsp19I CCATGG 1 cut(s) 579
BspANI GGCC 3 cut(s) 488, 734, 817
BspCNI CTCAG 6 cut(s) 280, 321, 425, 510, 946, 1375
BspDI ATCGAT 1 cut(s) 786
BspFNI CGCG 5 cut(s) 527, 546, 560, 769, 1421
BspLI GGNNCC 2 cut(s) 577, 1384
BspOI GCTAGC 1 cut(s) 932
BspPI GGATC 7 cut(s) 291, 309, 653, 1346, 1377, 1390, 1420
BspT104I TTCGAA 1 cut(s) 669
BspTNI GGTCTC 3 cut(s) 325, 1013, 1142
BsrDI GCAATG 1 cut(s) 818
BsrFI RCCGGY 3 cut(s) 817, 875, 1191
BssAI RCCGGY 3 cut(s) 817, 875, 1191
BssECI CCNNGG 5 cut(s) 401, 438, 495, 579, 1408
BssNI GRCGYC 2 cut(s) 764, 954
BssSI CACGAG 2 cut(s) 700, 1349
BssT1I CCWWGG 2 cut(s) 401, 579
Bst2BI CACGAG 2 cut(s) 700, 1349
Bst4CI ACNGT 5 cut(s) 232, 861, 1117, 1147, 1175
Bst6I CTCTTC 2 cut(s) 211, 666
BstACI GRCGYC 2 cut(s) 764, 954
BstAPI GCANNNNNTGC 1 cut(s) 155
BstBAI YACGTR 1 cut(s) 781
BstBI TTCGAA 1 cut(s) 669
BstC8I GCNNGC 9 cut(s) 275, 490, 819, 831, 930, 939, 1359, 1431, 1506
BstDEI CTNAG 9 cut(s) 267, 329, 412, 518, 835, 933, 1186, 1291, 1362
BstDSI CCRYGG 2 cut(s) 438, 579
BstF5I GGATG 2 cut(s) 535, 637
BstFNI CGCG 5 cut(s) 527, 546, 560, 769, 1421
BstH2I RGCGCY 2 cut(s) 482, 1208
BstHHI GCGC 4 cut(s) 481, 494, 546, 1207
BstMAI GTCTC 9 cut(s) 81, 325, 449, 875, 1013, 1031, 1142, 1291, 1346
BstMCI CGRYCG 1 cut(s) 1098
BstMWI GCNNNNNNNGC 9 cut(s) 155, 172, 485, 569, 740, 934, 938, 1510, 1538
BstNSI RCATGY 1 cut(s) 277
BstPAI GACNNNNGTC 1 cut(s) 702
BstSCI CCNGG 7 cut(s) 297, 847, 1071, 1087, 1132, 1388, 1398
BstSFI CTRYAG 1 cut(s) 27
BstUI CGCG 5 cut(s) 527, 546, 560, 769, 1421
BstV1I GCAGC 1 cut(s) 1519
BstX2I RGATCY 3 cut(s) 283, 301, 1382
BstYI RGATCY 3 cut(s) 283, 301, 1382
Bsu15I ATCGAT 1 cut(s) 786
BsuI GTATCC 1 cut(s) 1463
BsuRI GGCC 3 cut(s) 488, 734, 817
BsuTUI ATCGAT 1 cut(s) 786
BtgI CCRYGG 2 cut(s) 438, 579
BtsCI GGATG 2 cut(s) 535, 637
BtsIMutI CAGTG 3 cut(s) 420, 1152, 1370
Cac8I GCNNGC 9 cut(s) 275, 490, 819, 831, 930, 939, 1359, 1431, 1506
CfoI GCGC 4 cut(s) 481, 494, 546, 1207
Cfr10I RCCGGY 3 cut(s) 817, 875, 1191
Cfr13I GGNCC 2 cut(s) 398, 854
ClaI ATCGAT 1 cut(s) 786
CseI GACGC 3 cut(s) 943, 1363, 1427
Csp6I GTAC 1 cut(s) 776
CspAI ACCGGT 1 cut(s) 1191
CviAII CATG 5 cut(s) 97, 145, 274, 580, 1276
CviQI GTAC 1 cut(s) 776
DdeI CTNAG 9 cut(s) 267, 329, 412, 518, 835, 933, 1186, 1291, 1362
DrdI GACNNNNNNGTC 2 cut(s) 424, 852
DseDI GACNNNNNNGTC 2 cut(s) 424, 852
EaeI YGGCCR 2 cut(s) 732, 815
Eam1104I CTCTTC 2 cut(s) 211, 666
EarI CTCTTC 2 cut(s) 211, 666
EciI GGCGGA 3 cut(s) 634, 1375, 1571
Eco130I CCWWGG 2 cut(s) 401, 579
Eco24I GRGCYC 1 cut(s) 268
Eco31I GGTCTC 3 cut(s) 325, 1013, 1142
Eco47I GGWCC 2 cut(s) 398, 854
Eco47III AGCGCT 1 cut(s) 1206
Eco57I CTGAAG 2 cut(s) 123, 665
Eco88I CYCGRG 1 cut(s) 1219
EcoRI GAATTC 1 cut(s) 959
EcoT14I CCWWGG 2 cut(s) 401, 579
EcoT38I GRGCYC 1 cut(s) 268
ErhI CCWWGG 2 cut(s) 401, 579
Esp3I CGTCTC 3 cut(s) 81, 875, 1346
FaeI CATG 5 cut(s) 100, 148, 277, 583, 1279
FaiI YATR 9 cut(s) 98, 146, 275, 581, 809, 1013, 1170, 1277, 1379
FalI AAGNNNNNCTT 2 cut(s) 663, 695
FaqI GGGAC 1 cut(s) 690
FatI CATG 5 cut(s) 96, 144, 273, 579, 1275
Fnu4HI GCNGC 6 cut(s) 561, 648, 651, 1533, 1554, 1565
FokI GGATG 2 cut(s) 542, 624
FriOI GRGCYC 1 cut(s) 268
Fsp4HI GCNGC 6 cut(s) 561, 648, 651, 1533, 1554, 1565
FspBI CTAG 8 cut(s) 210, 482, 614, 749, 791, 929, 1043, 1550
GlaI GCGC 4 cut(s) 480, 493, 545, 1206
GluI GCNGC 6 cut(s) 561, 648, 651, 1533, 1554, 1565
GsuI CTGGAG 1 cut(s) 530
HaeII RGCGCY 2 cut(s) 482, 1208
HaeIII GGCC 3 cut(s) 488, 734, 817
HgaI GACGC 3 cut(s) 943, 1363, 1427
HhaI GCGC 4 cut(s) 481, 494, 546, 1207
Hin1I GRCGYC 2 cut(s) 764, 954
Hin1II CATG 5 cut(s) 100, 148, 277, 583, 1279
Hin6I GCGC 4 cut(s) 479, 492, 544, 1205
HinP1I GCGC 4 cut(s) 479, 492, 544, 1205
HincII GTYRAC 2 cut(s) 429, 1405
HindII GTYRAC 2 cut(s) 429, 1405
HindIII AAGCTT 1 cut(s) 164
HpaI GTTAAC 1 cut(s) 1405
HphI GGTGA 3 cut(s) 865, 1061, 1187
Hpy166II GTNNAC 5 cut(s) 429, 778, 857, 1288, 1405
Hpy188III TCNNGA 7 cut(s) 17, 305, 749, 899, 911, 1018, 1265
Hpy8I GTNNAC 5 cut(s) 429, 778, 857, 1288, 1405
HpyAV CCTTC 8 cut(s) 54, 229, 255, 651, 672, 676, 896, 1319
HpyCH4III ACNGT 5 cut(s) 232, 861, 1117, 1147, 1175
HpyCH4IV ACGT 5 cut(s) 23, 764, 780, 1179, 1375
HpyCH4V TGCA 5 cut(s) 158, 360, 811, 829, 1535
HpyF10VI GCNNNNNNNGC 9 cut(s) 155, 172, 485, 569, 740, 934, 938, 1510, 1538
HpyF3I CTNAG 9 cut(s) 267, 329, 412, 518, 835, 933, 1186, 1291, 1362
HpySE526I ACGT 5 cut(s) 23, 764, 780, 1179, 1375
Hsp92I GRCGYC 2 cut(s) 764, 954
Hsp92II CATG 5 cut(s) 100, 148, 277, 583, 1279
HspAI GCGC 4 cut(s) 479, 492, 544, 1205
KroI GCCGGC 1 cut(s) 817
KroNI GCCGGC 1 cut(s) 819
KspAI GTTAAC 1 cut(s) 1405
LmnI GCTCC 2 cut(s) 46, 575
Lsp1109I GCAGC 1 cut(s) 1519
LweI GCATC 2 cut(s) 520, 1544
MaeI CTAG 8 cut(s) 210, 482, 614, 749, 791, 929, 1043, 1550
MaeII ACGT 5 cut(s) 23, 764, 780, 1179, 1375
MaeIII GTNAC 7 cut(s) 122, 371, 407, 415, 757, 1141, 1175
MboII GAAGA 7 cut(s) 44, 47, 129, 198, 671, 683, 1253
MflI RGATCY 3 cut(s) 283, 301, 1382
MhlI GDGCHC 1 cut(s) 268
MluCI AATT 6 cut(s) 289, 624, 716, 959, 965, 1051
MluI ACGCGT 1 cut(s) 1419
MlyI GAGTC 9 cut(s) 387, 404, 434, 462, 692, 1033, 1226, 1270, 1281
MmeI TCCRAC 3 cut(s) 868, 902, 1260
MroNI GCCGGC 1 cut(s) 817
MroXI GAANNNNTTC 3 cut(s) 675, 906, 1206
MseI TTAA 9 cut(s) 288, 798, 824, 1050, 1119, 1128, 1197, 1404, 1425
MslI CAYNNNNRTG 2 cut(s) 1173, 1540
MspA1I CMGCKG 2 cut(s) 508, 937
MspR9I CCNGG 7 cut(s) 299, 849, 1073, 1089, 1134, 1390, 1400
MvnI CGCG 5 cut(s) 527, 546, 560, 769, 1421
MwoI GCNNNNNNNGC 9 cut(s) 155, 172, 485, 569, 740, 934, 938, 1510, 1538
NaeI GCCGGC 1 cut(s) 819
NciI CCSGG 7 cut(s) 299, 849, 1073, 1089, 1134, 1390, 1400
NcoI CCATGG 1 cut(s) 579
NgoMIV GCCGGC 1 cut(s) 817
NheI GCTAGC 1 cut(s) 928
NlaIII CATG 5 cut(s) 100, 148, 277, 583, 1279
NlaIV GGNNCC 2 cut(s) 577, 1384
NmeAIII GCCGAG 1 cut(s) 520
NmuCI GTSAC 3 cut(s) 407, 415, 1175
NspI RCATGY 1 cut(s) 277
NspV TTCGAA 1 cut(s) 669
PaeI GCATGC 1 cut(s) 277
PaeR7I CTCGAG 1 cut(s) 1219
PcsI WCGNNNNNNNCGW 3 cut(s) 543, 1236, 1347
PdiI GCCGGC 1 cut(s) 819
PdmI GAANNNNTTC 3 cut(s) 675, 906, 1206
PfeI GAWTC 9 cut(s) 388, 514, 634, 676, 745, 886, 895, 907, 1031
PflFI GACNNNGTC 2 cut(s) 396, 1271
PinAI ACCGGT 1 cut(s) 1191
PkrI GCNGC 6 cut(s) 562, 649, 652, 1534, 1555, 1566
Ple19I CGATCG 1 cut(s) 1098
PleI GAGTC 9 cut(s) 387, 404, 433, 462, 692, 1033, 1226, 1269, 1280
PpsI GAGTC 9 cut(s) 387, 404, 433, 462, 692, 1033, 1226, 1269, 1280
Ppu21I YACGTR 1 cut(s) 781
PshAI GACNNNNGTC 1 cut(s) 702
PspN4I GGNNCC 2 cut(s) 577, 1384
PspPI GGNCC 2 cut(s) 398, 854
PspXI VCTCGAGB 1 cut(s) 1219
PsuI RGATCY 3 cut(s) 283, 301, 1382
PsyI GACNNNGTC 2 cut(s) 396, 1271
PvuI CGATCG 1 cut(s) 1098
PvuII CAGCTG 2 cut(s) 508, 937
RsaI GTAC 1 cut(s) 777
RsaNI GTAC 1 cut(s) 776
RseI CAYNNNNRTG 2 cut(s) 1173, 1540
SaqAI TTAA 9 cut(s) 288, 798, 824, 1050, 1119, 1128, 1197, 1404, 1425
SatI GCNGC 6 cut(s) 561, 648, 651, 1533, 1554, 1565
Sau96I GGNCC 2 cut(s) 398, 854
SchI GAGTC 9 cut(s) 387, 404, 434, 462, 692, 1033, 1226, 1270, 1281
ScrFI CCNGG 7 cut(s) 299, 849, 1073, 1089, 1134, 1390, 1400
SduI GDGCHC 1 cut(s) 268
SfaNI GCATC 2 cut(s) 520, 1544
SfcI CTRYAG 1 cut(s) 27
Sfr274I CTCGAG 1 cut(s) 1219
SfuI TTCGAA 1 cut(s) 669
SgrAI CRCCGGYG 1 cut(s) 875
SinI GGWCC 2 cut(s) 398, 854
SlaI CTCGAG 1 cut(s) 1219
SmiMI CAYNNNNRTG 2 cut(s) 1173, 1540
SmlI CTYRAG 3 cut(s) 567, 942, 1219
SmoI CTYRAG 3 cut(s) 567, 942, 1219
SphI GCATGC 1 cut(s) 277
Sse9I AATT 6 cut(s) 289, 624, 716, 959, 965, 1051
SspMI CTAG 8 cut(s) 210, 482, 614, 749, 791, 929, 1043, 1550
StyD4I CCNGG 7 cut(s) 297, 847, 1071, 1087, 1132, 1388, 1398
StyI CCWWGG 2 cut(s) 401, 579
TaaI ACNGT 5 cut(s) 232, 861, 1117, 1147, 1175
TaiI ACGT 5 cut(s) 26, 767, 783, 1182, 1378
TaqII GACCGA 2 cut(s) 386, 1284
TasI AATT 6 cut(s) 289, 624, 716, 959, 965, 1051
TauI GCSGC 5 cut(s) 563, 650, 653, 1556, 1567
TfiI GAWTC 9 cut(s) 388, 514, 634, 676, 745, 886, 895, 907, 1031
Tru1I TTAA 9 cut(s) 288, 798, 824, 1050, 1119, 1128, 1197, 1404, 1425
Tru9I TTAA 9 cut(s) 288, 798, 824, 1050, 1119, 1128, 1197, 1404, 1425
TscAI CASTG 3 cut(s) 420, 1152, 1370
TseFI GTSAC 3 cut(s) 407, 415, 1175
TseI GCWGC 1 cut(s) 1532
Tsp45I GTSAC 3 cut(s) 407, 415, 1175
TspDTI ATGAA 4 cut(s) 17, 224, 626, 701
TspGWI ACGGA 5 cut(s) 427, 879, 998, 1337, 1506
TspRI CASTG 3 cut(s) 420, 1152, 1370
Tth111I GACNNNGTC 2 cut(s) 396, 1271
VpaK11BI GGWCC 2 cut(s) 398, 854
XapI RAATTY 4 cut(s) 624, 716, 959, 965
XbaI TCTAGA 1 cut(s) 748
XceI RCATGY 1 cut(s) 277
XhoI CTCGAG 1 cut(s) 1219
XmnI GAANNNNTTC 3 cut(s) 675, 906, 1206
XspI CTAG 8 cut(s) 210, 482, 614, 749, 791, 929, 1043, 1550
ZraI GACGTC 1 cut(s) 765
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.