Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0010801

Physical Location & Seq

Genomic Coordinates Reverse (-)

38296890 .. 38299730

Gene Structure 2841 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG340500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGAAGCGAAATCACCAAGTCAGTTGCGGCGGAGGTCAAAATGGTAGCAATACGTCCGTCTCTAATAGTAGCAAGGCCAAAATTTGGGAGGAGGAGCAAGAATCTGGAAGCATGGATGAGTTATTGGCCGTTTTGGGCTATAAAGTCAGGTCCGATGACATGGCCGATGTGGCCGAGAAGCTTGAACAGCTTGAGATGGTCATGGGTTCAGCTCAACAAGATGGGATTTCACAGCTTTCCGATACAGTTCATTACAACCCATCCGATCTCTCCGGCTGGCTCCAGACCATGCTCTCTGAACTCAACCCAATTGACGACGTCTTGTCAAACTCTCAGCAGCAGAAACAGAAGCAGAAGCAGATTGAGACCCAACCTCGGGTCATTTACGATGACAACTCCGAGTACGATCTCAGAGCCATTCCTGGTATTGCAGCCTACCCACAATCCCAATTGCAAACCGCGACTGAAATCAATAGCAAACGGTTGAAAACCTCAACTGGTTCGGCATCATCATCTTCTTCTTCGATTGAGCCTCAGCCACTCGTTGTGGTTGATGCACAGGATACAGGGGTGAGATTGGTGCACACACTCCTGGCCTGTGCCGAGGCTGTTCAGCAAGACAACTTGAAGGTGGCCGACGCGCTCGTCAAGCAAGTAGGCACACTCGCCGTCTCCCAGACCGGCGCTATGAGAAAGGTCGCCACTTACTTTGCAGAAGCCCTTGCTCGACGTATTTACAGAGTCTACCCTCAAGAGGATTCTCTCGTTTCTTCCTACTCGGATATTCTTCAGATGCACTTCTACGAGACCTGCCCTTACCTCAAATTTGCCCACTTCACTGCCAATCAAGCTATTCTCGAAGCATTCGCCACCGCAACCAGAGTACACGTCGTCGATTTCGGGCTGAAGCAAGGGATGCAATGGCCGGCTCTGATGCAAGCGCTCGCATTGAGGCCTGGTGGGCCGCCGGTGTTTCGGCTTACGGGTGTTGGGCCGCCGCAGCCGGACAACACAGACGCCCTGCAGCAAGTGGGTTGGAAATTGGCCCAATTCGCGGAGACCATGGGCGTCGAGTTCAAGTTCGAGTTTCGAGGTTTTGTCGCGAACAGTTTGGCTGATCTGGAGCCGTCAATGCTCGACGTCCGTCCGCCGGAAGTAGAGGCCTTGGCGGTCAACTCTGTTTTCGAGCTCCACTGCCTGTTGGCGCGACCGGGGGCGATAGAGAAAGTCATGGCTTCAATCAAAGCCATGAATCCCAAGATTGTTACGATGGTGGAGCAGGAGGCGAATCATAACGGCCCGGTTTTTCTGGACCGGTTCAACGAGTCATTGCACTATTACTCCAGCTTATTTGACTCGTTGGAGGGTTCGTCTGGGCCGAGTGAAGACCTGGTCATGTCGGAGGTGTACCTGGGAAGGCAGATATGCAACGTGGTGGCATGTGATGGTGGGGACAGAGTGGAGCGCCATGAGACCCTGACGCAGTGGCGGAACCGGTTGGCCCGAGCCGGGTTCGAACCGGTTCATCTGGGATCCAACGTGTTCAAGCAGGCGCAGACGTTGCTGGCGCTTTACGCCGGCGGAGGTGGGTATCAGGTGGAGGAGAACAATGGGTCTCTCACGCTTGGGTGGCACACACGGCCTCTCATCGCCACCTCGGCTTGGCAACTGGCGAGTCCGACTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0006972 GO:0007154 GO:0007165 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009751 GO:0009753 GO:0009755 GO:0009863 GO:0009867 GO:0009889 GO:0009937 GO:0009938 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010033 GO:0010187 GO:0010468 GO:0010556 GO:0010646 GO:0010648 GO:0014070 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031326 GO:0032870 GO:0033993 GO:0035690 GO:0042221 GO:0042493 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0046677 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0080050 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1900140 GO:1901363 GO:1901700 GO:1901701 GO:1903506 GO:2000026 GO:2000033 GO:2000034 GO:2000112 GO:2000241 GO:2000377 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DELLA GRAS

Protein Analysis

562

Amino Acids

61.7

Weight (kDa)

5.08

Isoelectric Point (pI)

49.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DELLA	PF12041	39 - 104	1.8e-33	Transcriptional regulator DELLA protein N terminal
GRAS	PF03514	193 - 556	9.6e-134	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010801)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66350 AT3G03450 AT5G17490
malus_domestica	MD09G1264800.v1.1 MD17G1260700.v1.1
prunus_persica	Prupe.3G162500_v2.0.a1
pyrus_communis	pycom09g17840 pycom17g26140
rosa_chinensis	RchiOBHm_Chr3g0493011
rosa_laevigata	RLG00000022733
rosa_multiflora	Rmu_co8350645.1_g000001 Rmu_co8421333.1_g000001 Rmu_sc0003941.1_g000002
rosa_roxburghii	Rroxscaffold_6G00391950
rosa_rugosa	Rorug03G0258700
rosa_samantha	Rh3AG307700 Rh3BG343100 Rh3CG340500 Rh3DG342800
rosa_wichuraiana	Rw3G027060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	644
AatII	GACGTC	2 cut(s)	321, 1143
Acc36I	ACCTGC	1 cut(s)	818
AccB7I	CCANNNNNTGG	1 cut(s)	84
AccI	GTMKAC	1 cut(s)	744
AccII	CGCG	5 cut(s)	461, 641, 1055, 1103, 1207
AclWI	GGATC	2 cut(s)	1527, 1540
AcoI	YGGCCR	5 cut(s)	126, 162, 171, 633, 923
AcsI	RAATTY	2 cut(s)	81, 824
AcuI	CTGAAG	2 cut(s)	773, 926
AcyI	GRCGYC	4 cut(s)	318, 1017, 1068, 1140
AfaI	GTAC	3 cut(s)	404, 885, 1409
AfeI	AGCGCT	1 cut(s)	942
AfiI	CCNNNNNNNGG	8 cut(s)	84, 375, 376, 754, 1054, 1150, 1509, 1662
AflIII	ACRYGT	2 cut(s)	886, 1539
AgeI	ACCGGT	3 cut(s)	1314, 1494, 1519
AgsI	TTSAA	7 cut(s)	185, 487, 628, 1078, 1239, 1321, 1546
AhdI	GACNNNNNGTC	1 cut(s)	322
AjiI	CACGTC	1 cut(s)	889
AjnI	CCWGG	5 cut(s)	421, 591, 955, 1389, 1410
AluBI	AGCT	7 cut(s)	181, 190, 212, 235, 851, 1189, 1347
AluI	AGCT	7 cut(s)	181, 190, 212, 235, 851, 1189, 1347
Alw21I	GWGCWC	2 cut(s)	585, 1191
Alw26I	GTCTC	7 cut(s)	64, 359, 676, 800, 1052, 1466, 1620
Alw44I	GTGCAC	1 cut(s)	581
AlwI	GGATC	2 cut(s)	1527, 1540
Ama87I	CYCGRG	2 cut(s)	375, 1503
Aor51HI	AGCGCT	1 cut(s)	942
ApaLI	GTGCAC	1 cut(s)	581
ApeKI	GCWGC	4 cut(s)	337, 431, 1000, 1024
ApoI	RAATTY	2 cut(s)	81, 824
AsiGI	ACCGGT	3 cut(s)	1314, 1494, 1519
Asp700I	GAANNNNTTC	1 cut(s)	1521
AspLEI	GCGC	7 cut(s)	643, 686, 943, 1207, 1467, 1555, 1570
AspS9I	GGNCC	8 cut(s)	150, 962, 992, 1045, 1298, 1312, 1376, 1501
AsuC2I	CCSGG	3 cut(s)	1212, 1301, 1510
AsuHPI	GGTGA	2 cut(s)	5, 583
AsuII	TTCGAA	1 cut(s)	1515
AvaI	CYCGRG	2 cut(s)	375, 1503
AvaII	GGWCC	2 cut(s)	150, 1312
BaeGI	GKGCMC	1 cut(s)	585
BaeI	ACNNNNGTAYC	2 cut(s)	555, 588
BamHI	GGATCC	1 cut(s)	1532
BanII	GRGCYC	1 cut(s)	1191
BbsI	GAAGAC	1 cut(s)	1392
Bbv12I	GWGCWC	2 cut(s)	585, 1191
BbvCI	CCTCAGC	1 cut(s)	534
BbvI	GCAGC	4 cut(s)	349, 443, 1012, 1036
BccI	CCATC	5 cut(s)	190, 215, 268, 1264, 1439
BceAI	ACGGC	5 cut(s)	113, 653, 1111, 1312, 1655
BciT130I	CCWGG	5 cut(s)	423, 593, 957, 1391, 1412
BciVI	GTATCC	1 cut(s)	556
BcnI	CCSGG	3 cut(s)	1212, 1301, 1510
BcoDI	GTCTC	7 cut(s)	64, 359, 676, 800, 1052, 1466, 1620
BfmI	CTRYAG	1 cut(s)	1022
BfoI	RGCGCY	4 cut(s)	687, 944, 1468, 1571
BfuAI	ACCTGC	1 cut(s)	818
BfuI	GTATCC	1 cut(s)	556
BglI	GCCNNNNNGGC	3 cut(s)	170, 961, 1658
BisI	GCNGC	8 cut(s)	28, 338, 432, 965, 995, 998, 1001, 1025
BlsI	GCNGC	8 cut(s)	29, 339, 433, 966, 996, 999, 1002, 1026
Bme1390I	CCNGG	8 cut(s)	423, 593, 957, 1212, 1301, 1391, 1412, 1510
Bme18I	GGWCC	2 cut(s)	150, 1312
BmeRI	GACNNNNNGTC	1 cut(s)	322
BmeT110I	CYCGRG	2 cut(s)	375, 1503
BmgBI	CACGTC	1 cut(s)	889
BmgT120I	GGNCC	8 cut(s)	150, 962, 992, 1045, 1298, 1312, 1376, 1501
BmiI	GGNNCC	4 cut(s)	281, 1125, 1493, 1534
BmrFI	CCNGG	8 cut(s)	423, 593, 957, 1212, 1301, 1391, 1412, 1510
BmsI	GCATC	5 cut(s)	515, 544, 783, 906, 924
BoxI	GACNNNNGTC	1 cut(s)	1143
BpiI	GAAGAC	1 cut(s)	1392
BplI	GAGNNNNNCTC	1 cut(s)	1666
BpmI	CTGGAG	3 cut(s)	266, 1142, 1327
Bpu10I	CCTNAGC	1 cut(s)	534
Bpu14I	TTCGAA	1 cut(s)	1515
BpuEI	CTTGAG	2 cut(s)	212, 735
BpuMI	CCSGG	3 cut(s)	1212, 1301, 1510
BsaHI	GRCGYC	4 cut(s)	318, 1017, 1068, 1140
BsaI	GGTCTC	5 cut(s)	359, 800, 1052, 1466, 1620
BsaJI	CCNNGG	7 cut(s)	374, 603, 1062, 1164, 1211, 1411, 1656
BsaWI	WCCGGW	3 cut(s)	1314, 1494, 1519
BsaXI	ACNNNNNCTCC	4 cut(s)	1325, 1355, 1355, 1385
Bsc4I	CCNNNNNNNGG	8 cut(s)	84, 375, 376, 754, 1054, 1150, 1509, 1662
Bse118I	RCCGGY	7 cut(s)	680, 925, 967, 1314, 1494, 1519, 1577
Bse1I	ACTGG	2 cut(s)	502, 1674
Bse3DI	GCAATG	2 cut(s)	926, 1328
BseBI	CCWGG	5 cut(s)	423, 593, 957, 1391, 1412
BseDI	CCNNGG	7 cut(s)	374, 603, 1062, 1164, 1211, 1411, 1656
BseGI	GGATG	3 cut(s)	121, 260, 921
BseLI	CCNNNNNNNGG	8 cut(s)	84, 375, 376, 754, 1054, 1150, 1509, 1662
BseMI	GCAATG	2 cut(s)	926, 1328
BseMII	CTCAG	3 cut(s)	347, 424, 548
BseNI	ACTGG	2 cut(s)	502, 1674
BseRI	GAGGAG	3 cut(s)	104, 107, 1616
BseSI	GKGCMC	1 cut(s)	585
BseXI	GCAGC	4 cut(s)	349, 443, 1012, 1036
Bsh1236I	CGCG	5 cut(s)	461, 641, 1055, 1103, 1207
Bsh1285I	CGRYCG	1 cut(s)	1211
BshTI	ACCGGT	3 cut(s)	1314, 1494, 1519
BsiEI	CGRYCG	1 cut(s)	1211
BsiHKAI	GWGCWC	2 cut(s)	585, 1191
BsiHKCI	CYCGRG	2 cut(s)	375, 1503
BslFI	GGGAC	1 cut(s)	1466
BslI	CCNNNNNNNGG	8 cut(s)	84, 375, 376, 754, 1054, 1150, 1509, 1662
BsmAI	GTCTC	7 cut(s)	64, 359, 676, 800, 1052, 1466, 1620
BsmBI	CGTCTC	2 cut(s)	64, 676
BsmFI	GGGAC	1 cut(s)	1466
BsmI	GAATGC	1 cut(s)	863
Bso31I	GGTCTC	5 cut(s)	359, 800, 1052, 1466, 1620
BsoBI	CYCGRG	2 cut(s)	375, 1503
Bsp119I	TTCGAA	1 cut(s)	1515
Bsp1286I	GDGCHC	2 cut(s)	585, 1191
Bsp143I	GATC	4 cut(s)	265, 406, 1117, 1532
Bsp19I	CCATGG	1 cut(s)	1062
Bsp68I	TCGCGA	1 cut(s)	1103
BspCNI	CTCAG	3 cut(s)	346, 423, 547
BspFNI	CGCG	5 cut(s)	461, 641, 1055, 1103, 1207
BspLI	GGNNCC	4 cut(s)	281, 1125, 1493, 1534
BspMAI	CTGCAG	1 cut(s)	1026
BspMI	ACCTGC	1 cut(s)	818
BspPI	GGATC	2 cut(s)	1527, 1540
BspT104I	TTCGAA	1 cut(s)	1515
BspTNI	GGTCTC	5 cut(s)	359, 800, 1052, 1466, 1620
BsrDI	GCAATG	2 cut(s)	926, 1328
BsrFI	RCCGGY	7 cut(s)	680, 925, 967, 1314, 1494, 1519, 1577
BsrI	ACTGG	2 cut(s)	502, 1674
BssAI	RCCGGY	7 cut(s)	680, 925, 967, 1314, 1494, 1519, 1577
BssECI	CCNNGG	7 cut(s)	374, 603, 1062, 1164, 1211, 1411, 1656
BssMI	GATC	4 cut(s)	265, 406, 1117, 1532
BssNI	GRCGYC	4 cut(s)	318, 1017, 1068, 1140
BssT1I	CCWWGG	2 cut(s)	1062, 1164
Bst2UI	CCWGG	5 cut(s)	423, 593, 957, 1391, 1412
Bst4CI	ACNGT	3 cut(s)	247, 483, 1109
BstACI	GRCGYC	4 cut(s)	318, 1017, 1068, 1140
BstAPI	GCANNNNNTGC	2 cut(s)	916, 1561
BstBI	TTCGAA	1 cut(s)	1515
BstC8I	GCNNGC	7 cut(s)	278, 927, 939, 945, 1551, 1566, 1579
BstDEI	CTNAG	4 cut(s)	333, 410, 534, 1683
BstDSI	CCRYGG	1 cut(s)	1062
BstF5I	GGATG	3 cut(s)	121, 260, 921
BstFNI	CGCG	5 cut(s)	461, 641, 1055, 1103, 1207
BstH2I	RGCGCY	4 cut(s)	687, 944, 1468, 1571
BstHHI	GCGC	7 cut(s)	643, 686, 943, 1207, 1467, 1555, 1570
BstKTI	GATC	4 cut(s)	268, 409, 1120, 1535
BstMAI	GTCTC	7 cut(s)	64, 359, 676, 800, 1052, 1466, 1620
BstMBI	GATC	4 cut(s)	265, 406, 1117, 1532
BstMCI	CGRYCG	1 cut(s)	1211
BstNI	CCWGG	5 cut(s)	423, 593, 957, 1391, 1412
BstNSI	RCATGY	1 cut(s)	1443
BstPAI	GACNNNNGTC	1 cut(s)	1143
BstSCI	CCNGG	8 cut(s)	421, 591, 955, 1210, 1299, 1389, 1410, 1508
BstSFI	CTRYAG	1 cut(s)	1022
BstSLI	GKGCMC	1 cut(s)	585
BstUI	CGCG	5 cut(s)	461, 641, 1055, 1103, 1207
BstV1I	GCAGC	4 cut(s)	349, 443, 1012, 1036
BstV2I	GAAGAC	1 cut(s)	1392
BstX2I	RGATCY	1 cut(s)	1532
BstYI	RGATCY	1 cut(s)	1532
BsuI	GTATCC	1 cut(s)	556
BtgI	CCRYGG	1 cut(s)	1062
BtgZI	GCGATG	1 cut(s)	1633
BtrI	CACGTC	1 cut(s)	889
BtsCI	GGATG	3 cut(s)	121, 260, 921
BtsI	GCAGTG	3 cut(s)	837, 1192, 1490
BtsIMutI	CAGTG	3 cut(s)	837, 1192, 1490
BtuMI	TCGCGA	1 cut(s)	1103
BveI	ACCTGC	1 cut(s)	818
Cac8I	GCNNGC	7 cut(s)	278, 927, 939, 945, 1551, 1566, 1579
CfoI	GCGC	7 cut(s)	643, 686, 943, 1207, 1467, 1555, 1570
Cfr10I	RCCGGY	7 cut(s)	680, 925, 967, 1314, 1494, 1519, 1577
Cfr13I	GGNCC	8 cut(s)	150, 962, 992, 1045, 1298, 1312, 1376, 1501
CseI	GACGC	4 cut(s)	647, 1025, 1057, 1489
CsiI	ACCWGGT	1 cut(s)	1389
Csp6I	GTAC	3 cut(s)	403, 884, 1408
CspAI	ACCGGT	3 cut(s)	1314, 1494, 1519
CspCI	CAANNNNNGTGG	2 cut(s)	691, 726
CviQI	GTAC	3 cut(s)	403, 884, 1408
DdeI	CTNAG	4 cut(s)	333, 410, 534, 1683
DpnI	GATC	4 cut(s)	267, 408, 1119, 1534
DpnII	GATC	4 cut(s)	265, 406, 1117, 1532
DrdI	GACNNNNNNGTC	1 cut(s)	644
DriI	GACNNNNNGTC	1 cut(s)	322
DseDI	GACNNNNNNGTC	1 cut(s)	644
EaeI	YGGCCR	5 cut(s)	126, 162, 171, 633, 923
Eam1105I	GACNNNNNGTC	1 cut(s)	322
EciI	GGCGGA	4 cut(s)	45, 1137, 1504, 1596
Ecl136II	GAGCTC	1 cut(s)	1189
Eco130I	CCWWGG	2 cut(s)	1062, 1164
Eco147I	AGGCCT	2 cut(s)	955, 1163
Eco24I	GRGCYC	1 cut(s)	1191
Eco31I	GGTCTC	5 cut(s)	359, 800, 1052, 1466, 1620
Eco47I	GGWCC	2 cut(s)	150, 1312
Eco47III	AGCGCT	1 cut(s)	942
Eco53kI	GAGCTC	1 cut(s)	1189
Eco57I	CTGAAG	2 cut(s)	773, 926
Eco88I	CYCGRG	2 cut(s)	375, 1503
EcoICRI	GAGCTC	1 cut(s)	1189
EcoRII	CCWGG	5 cut(s)	421, 591, 955, 1389, 1410
EcoT14I	CCWWGG	2 cut(s)	1062, 1164
EcoT38I	GRGCYC	1 cut(s)	1191
ErhI	CCWWGG	2 cut(s)	1062, 1164
Esp3I	CGTCTC	2 cut(s)	64, 676
FaqI	GGGAC	1 cut(s)	1466
FblI	GTMKAC	1 cut(s)	744
Fnu4HI	GCNGC	8 cut(s)	28, 338, 432, 965, 995, 998, 1001, 1025
FokI	GGATG	3 cut(s)	128, 247, 928
FriOI	GRGCYC	1 cut(s)	1191
Fsp4HI	GCNGC	8 cut(s)	28, 338, 432, 965, 995, 998, 1001, 1025
GlaI	GCGC	7 cut(s)	642, 685, 942, 1206, 1466, 1554, 1569
GluI	GCNGC	8 cut(s)	28, 338, 432, 965, 995, 998, 1001, 1025
GsuI	CTGGAG	3 cut(s)	266, 1142, 1327
HaeII	RGCGCY	4 cut(s)	687, 944, 1468, 1571
HgaI	GACGC	4 cut(s)	647, 1025, 1057, 1489
HhaI	GCGC	7 cut(s)	643, 686, 943, 1207, 1467, 1555, 1570
Hin1I	GRCGYC	4 cut(s)	318, 1017, 1068, 1140
Hin6I	GCGC	7 cut(s)	641, 684, 941, 1205, 1465, 1553, 1568
HinP1I	GCGC	7 cut(s)	641, 684, 941, 1205, 1465, 1553, 1568
HincII	GTYRAC	1 cut(s)	1174
HindII	GTYRAC	1 cut(s)	1174
HindIII	AAGCTT	1 cut(s)	179
HinfI	GANTC	9 cut(s)	101, 741, 758, 1252, 1288, 1325, 1355, 1675, 1681
HphI	GGTGA	2 cut(s)	5, 583
Hpy166II	GTNNAC	5 cut(s)	583, 745, 886, 1174, 1408
Hpy188III	TCNNGA	7 cut(s)	105, 283, 752, 857, 1102, 1121, 1310
Hpy8I	GTNNAC	5 cut(s)	583, 745, 886, 1174, 1408
Hpy99I	CGWCG	7 cut(s)	320, 641, 732, 893, 896, 1073, 1142
HpyAV	CCTTC	2 cut(s)	622, 1410
HpyCH4III	ACNGT	3 cut(s)	247, 483, 1109
HpyCH4IV	ACGT	8 cut(s)	53, 318, 730, 888, 1140, 1431, 1539, 1559
HpyF3I	CTNAG	4 cut(s)	333, 410, 534, 1683
HpySE526I	ACGT	8 cut(s)	53, 318, 730, 888, 1140, 1431, 1539, 1559
Hsp92I	GRCGYC	4 cut(s)	318, 1017, 1068, 1140
HspAI	GCGC	7 cut(s)	641, 684, 941, 1205, 1465, 1553, 1568
KroI	GCCGGC	2 cut(s)	925, 1577
KroNI	GCCGGC	2 cut(s)	927, 1579
Kzo9I	GATC	4 cut(s)	265, 406, 1117, 1532
LmnI	GCTCC	6 cut(s)	94, 285, 1123, 1194, 1276, 1462
Lsp1109I	GCAGC	4 cut(s)	349, 443, 1012, 1036
LweI	GCATC	5 cut(s)	515, 544, 783, 906, 924
MabI	ACCWGGT	1 cut(s)	1389
MaeII	ACGT	8 cut(s)	53, 318, 730, 888, 1140, 1431, 1539, 1559
MaeIII	GTNAC	1 cut(s)	1264
MalI	GATC	4 cut(s)	267, 408, 1119, 1534
MboI	GATC	4 cut(s)	265, 406, 1117, 1532
MboII	GAAGA	6 cut(s)	507, 510, 513, 762, 779, 1397
MfeI	CAATTG	2 cut(s)	309, 449
MflI	RGATCY	1 cut(s)	1532
MhlI	GDGCHC	2 cut(s)	585, 1191
MluCI	AATT	6 cut(s)	81, 309, 449, 824, 1040, 1049
MlyI	GAGTC	5 cut(s)	750, 1334, 1349, 1675, 1684
MmeI	TCCRAC	4 cut(s)	1016, 1341, 1380, 1560
MreI	CGCCGGCG	1 cut(s)	1577
MroNI	GCCGGC	2 cut(s)	925, 1577
MroXI	GAANNNNTTC	1 cut(s)	1521
MspR9I	CCNGG	8 cut(s)	423, 593, 957, 1212, 1301, 1391, 1412, 1510
MunI	CAATTG	2 cut(s)	309, 449
Mva1269I	GAATGC	1 cut(s)	863
MvaI	CCWGG	5 cut(s)	423, 593, 957, 1391, 1412
MvnI	CGCG	5 cut(s)	461, 641, 1055, 1103, 1207
NaeI	GCCGGC	2 cut(s)	927, 1579
NciI	CCSGG	3 cut(s)	1212, 1301, 1510
NcoI	CCATGG	1 cut(s)	1062
NdeII	GATC	4 cut(s)	265, 406, 1117, 1532
NgoMIV	GCCGGC	2 cut(s)	925, 1577
NlaIV	GGNNCC	4 cut(s)	281, 1125, 1493, 1534
NmeAIII	GCCGAG	4 cut(s)	199, 628, 1404, 1637
NruI	TCGCGA	1 cut(s)	1103
NspI	RCATGY	1 cut(s)	1443
NspV	TTCGAA	1 cut(s)	1515
PceI	AGGCCT	2 cut(s)	955, 1163
PcsI	WCGNNNNNNNCGW	1 cut(s)	1376
PctI	GAATGC	1 cut(s)	863
PdiI	GCCGGC	2 cut(s)	927, 1579
PdmI	GAANNNNTTC	1 cut(s)	1521
PfeI	GAWTC	4 cut(s)	101, 758, 1252, 1288
PflFI	GACNNNGTC	2 cut(s)	317, 1391
PflMI	CCANNNNNTGG	1 cut(s)	84
PinAI	ACCGGT	3 cut(s)	1314, 1494, 1519
PkrI	GCNGC	8 cut(s)	29, 339, 433, 966, 996, 999, 1002, 1026
PleI	GAGTC	5 cut(s)	749, 1333, 1349, 1675, 1683
PpsI	GAGTC	5 cut(s)	749, 1333, 1349, 1675, 1683
PshAI	GACNNNNGTC	1 cut(s)	1143
Psp124BI	GAGCTC	1 cut(s)	1191
Psp6I	CCWGG	5 cut(s)	421, 591, 955, 1389, 1410
PspGI	CCWGG	5 cut(s)	421, 591, 955, 1389, 1410
PspN4I	GGNNCC	4 cut(s)	281, 1125, 1493, 1534
PspPI	GGNCC	8 cut(s)	150, 962, 992, 1045, 1298, 1312, 1376, 1501
PstI	CTGCAG	1 cut(s)	1026
PsuI	RGATCY	1 cut(s)	1532
PsyI	GACNNNGTC	2 cut(s)	317, 1391
RruI	TCGCGA	1 cut(s)	1103
RsaI	GTAC	3 cut(s)	404, 885, 1409
RsaNI	GTAC	3 cut(s)	403, 884, 1408
SacI	GAGCTC	1 cut(s)	1191
SatI	GCNGC	8 cut(s)	28, 338, 432, 965, 995, 998, 1001, 1025
Sau3AI	GATC	4 cut(s)	265, 406, 1117, 1532
Sau96I	GGNCC	8 cut(s)	150, 962, 992, 1045, 1298, 1312, 1376, 1501
SchI	GAGTC	5 cut(s)	750, 1334, 1349, 1675, 1684
ScrFI	CCNGG	8 cut(s)	423, 593, 957, 1212, 1301, 1391, 1412, 1510
SduI	GDGCHC	2 cut(s)	585, 1191
SexAI	ACCWGGT	1 cut(s)	1389
SfaNI	GCATC	5 cut(s)	515, 544, 783, 906, 924
SfcI	CTRYAG	1 cut(s)	1022
SfiI	GGCCNNNNNGGCC	2 cut(s)	170, 961
SfuI	TTCGAA	1 cut(s)	1515
SgrAI	CRCCGGYG	2 cut(s)	967, 1577
SinI	GGWCC	2 cut(s)	150, 1312
SmlI	CTYRAG	2 cut(s)	191, 750
SmoI	CTYRAG	2 cut(s)	191, 750
Sse9I	AATT	6 cut(s)	81, 309, 449, 824, 1040, 1049
SseBI	AGGCCT	2 cut(s)	955, 1163
SstI	GAGCTC	1 cut(s)	1191
StuI	AGGCCT	2 cut(s)	955, 1163
StyD4I	CCNGG	8 cut(s)	421, 591, 955, 1210, 1299, 1389, 1410, 1508
StyI	CCWWGG	2 cut(s)	1062, 1164
TaaI	ACNGT	3 cut(s)	247, 483, 1109
TaiI	ACGT	8 cut(s)	56, 321, 733, 891, 1143, 1434, 1542, 1562
TasI	AATT	6 cut(s)	81, 309, 449, 824, 1040, 1049
TatI	WGTACW	1 cut(s)	883
TauI	GCSGC	4 cut(s)	30, 967, 997, 1000
TfiI	GAWTC	4 cut(s)	101, 758, 1252, 1288
TscAI	CASTG	3 cut(s)	844, 1199, 1490
TseI	GCWGC	4 cut(s)	337, 431, 1000, 1024
TspDTI	ATGAA	4 cut(s)	17, 239, 1265, 1514
TspGWI	ACGGA	2 cut(s)	46, 1133
TspRI	CASTG	3 cut(s)	844, 1199, 1490
Tth111I	GACNNNGTC	2 cut(s)	317, 1391
Van91I	CCANNNNNTGG	1 cut(s)	84
VneI	GTGCAC	1 cut(s)	581
VpaK11BI	GGWCC	2 cut(s)	150, 1312
XapI	RAATTY	2 cut(s)	81, 824
XceI	RCATGY	1 cut(s)	1443
XmiI	GTMKAC	1 cut(s)	744
XmnI	GAANNNNTTC	1 cut(s)	1521
ZraI	GACGTC	2 cut(s)	319, 1141

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.