Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0010801

Physical Location & Seq

Genomic Coordinates Forward (+)

10876116 .. 10878082

Gene Structure 1967 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022733

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGAAGCGAAATCACCAAGTCAGTTGCGGCGGAGGTCAAAATGGTGGCAATACGTCCGTCTCTAATACTAGCAAGGCCAAAATTTGGGAGGAGGAGCAGGAATCAGGAAGCATGGATGAGTTATTGGCCGTTTTGGGCTACAAAGTCAGGTCCGATGACATGGCCGATGTGGCCGAGAAGCTTGAACAGCTTGAGATGGTCATGGGTTCAGCTCAACAAGATGGGATTTCACAGCTTTCCGATACAGTTCATTACAACCCATCCGATCTCTCCGGCTGGCTCCAGACCATGCTCTCTGAACTCAACCCAATTGACGACGTCTTGTCAAACTCTCAGCAGCAGAAGCAGAAGCAGATTGAGACCCAATCTCGGGTCATTTACGATGACAACTCCGAGTACGATCTCAGAGCCATTCCTGGTATTGCAGCCTACCCACAATCCCAATTGCAAACCGAGACTGAAATCAATAGCAAACGGTTGAAAACCTCAATTGGTTCAGCATCATCATCTTCTTCTTCTTCGATTGAGCCTCGGCCACTCGTTGTGGTTGATGCACACGATACAGGGGTGAGATTGGTGCACACACTCTTGGCCTGTGCCGAGGCTGTTCAGCAAGACAACTTGAAGGTGGCCGACGCGCTCGTCAAGCAAGTAGGCACACTCGCCGTCTCCCAGACCGGCGCCATGAGAAAGGTTGCCACTTACTTTGCAGAAGCCCTTGCCCGACGTATTTACAGAGTCTACCCTCAAGAGGATTCTCTCGTTTCTTCCTACTCGGATATTCTTCAGATGCACTTCTACGAGACCTGCCCTTACCTCAAATTTGCCCACTTCACTGCCAATCAAGCTATTCTCGAAGCATTCGCCACCGCAACCAGAGTACACGTCGTCGATTTCGGGCTGAAGCAAGGGATGCAATGGCCGGCTCTTATGCAAGCGCTCGCATTGAGGCCTGGTGGGCCGCCGGTGTTTCGGCTTACGGGTGTTGGGCCGCCGCAGCCGGACAACACAGACGCCCTGCAGCAAGTGGGTTGGAAATTGGCCCAATTCGCGGAGACCATGGGCGTCGAGTTCGAGTTTCGGGGTTTTGTCGCAAACAGTTTGGCTGATCTGGAGCCGTCAATGCTCGACGTCCGTTCGCCCGAAGTAGAGACCTTGGCGGTCAACTCTGTTTTCGAGCTCCACTGCCTGTTGGCGCGACCGGGGGCGATAGAGAAAGTCATGGCTTCAATCAAAGCCATGAATCCCAAGATTGTTACGATGGTGGAGCAGGAGGCGAATCATAACGGCCCGGTTTTTCTGGACCGTTTCAACGAGTCATTGCACTATTACTCCAGCTTATTTGACTCGTTGGAGGGTTCGTCTGGGCCGAGTGAAGACCTGGTGATGTCGGAGGTGTTCCTGGGAAGGCAGATATGCAACGTGGTGGCATGTGATGGTGGGGACAGAGTGGAGCGCCATGAGACCCTGACGCAGTGGCGGAACCGGTTGAGCCGAGCCGGTGTCTACTACTGGACCCTTGTTGCCTTCTTGCACAGTGCAATTTCAATTTCTAGAAGAAGAAGACTTGATGGTGAGAATGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0006972 GO:0007154 GO:0007165 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009751 GO:0009753 GO:0009755 GO:0009863 GO:0009867 GO:0009889 GO:0009937 GO:0009938 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010033 GO:0010187 GO:0010468 GO:0010556 GO:0010646 GO:0010648 GO:0014070 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031326 GO:0032870 GO:0033993 GO:0035690 GO:0042221 GO:0042493 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0046677 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0080050 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1900140 GO:1901363 GO:1901700 GO:1901701 GO:1903506 GO:2000026 GO:2000033 GO:2000034 GO:2000112 GO:2000241 GO:2000377 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DELLA GRAS

Protein Analysis

529

Amino Acids

58.35

Weight (kDa)

5.13

Isoelectric Point (pI)

52.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DELLA	PF12041	39 - 104	1.7e-33	Transcriptional regulator DELLA protein N terminal
GRAS	PF03514	192 - 507	1.1e-113	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010801)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66350 AT3G03450 AT5G17490
malus_domestica	MD09G1264800.v1.1 MD17G1260700.v1.1
prunus_persica	Prupe.3G162500_v2.0.a1
pyrus_communis	pycom09g17840 pycom17g26140
rosa_chinensis	RchiOBHm_Chr3g0493011
rosa_laevigata	RLG00000022733
rosa_multiflora	Rmu_co8350645.1_g000001 Rmu_co8421333.1_g000001 Rmu_sc0003941.1_g000002
rosa_roxburghii	Rroxscaffold_6G00391950
rosa_rugosa	Rorug03G0258700
rosa_samantha	Rh3AG307700 Rh3BG343100 Rh3CG340500 Rh3DG342800
rosa_wichuraiana	Rw3G027060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	641
AatII	GACGTC	2 cut(s)	321, 1134
Acc36I	ACCTGC	1 cut(s)	815
AccB1I	GGYRCC	1 cut(s)	680
AccB7I	CCANNNNNTGG	1 cut(s)	84
AccI	GTMKAC	2 cut(s)	741, 1506
AccII	CGCG	3 cut(s)	638, 1052, 1198
AciI	CCGC	9 cut(s)	27, 30, 870, 962, 992, 995, 1052, 1160, 1480
AcoI	YGGCCR	6 cut(s)	126, 162, 171, 533, 630, 920
AcsI	RAATTY	2 cut(s)	81, 821
AcuI	CTGAAG	2 cut(s)	770, 923
AcyI	GRCGYC	5 cut(s)	318, 681, 1014, 1065, 1131
AfaI	GTAC	2 cut(s)	398, 882
AfeI	AGCGCT	1 cut(s)	939
AfiI	CCNNNNNNNGG	5 cut(s)	84, 369, 370, 751, 1051
AflIII	ACRYGT	1 cut(s)	883
AgeI	ACCGGT	1 cut(s)	1485
AgsI	TTSAA	6 cut(s)	185, 481, 625, 1230, 1312, 1548
AhdI	GACNNNNNGTC	1 cut(s)	322
AjiI	CACGTC	1 cut(s)	886
AjnI	CCWGG	4 cut(s)	415, 952, 1380, 1401
AluBI	AGCT	7 cut(s)	181, 190, 212, 235, 848, 1180, 1338
AluI	AGCT	7 cut(s)	181, 190, 212, 235, 848, 1180, 1338
Alw21I	GWGCWC	2 cut(s)	582, 1182
Alw26I	GTCTC	8 cut(s)	64, 353, 449, 673, 797, 1049, 1145, 1457
Alw44I	GTGCAC	1 cut(s)	578
Ama87I	CYCGRG	1 cut(s)	369
Aor51HI	AGCGCT	1 cut(s)	939
ApaLI	GTGCAC	1 cut(s)	578
ApeKI	GCWGC	4 cut(s)	337, 425, 997, 1021
ApoI	RAATTY	2 cut(s)	81, 821
AsiGI	ACCGGT	1 cut(s)	1485
AspLEI	GCGC	5 cut(s)	640, 683, 940, 1198, 1458
AspS9I	GGNCC	8 cut(s)	150, 959, 989, 1042, 1289, 1303, 1367, 1515
AsuC2I	CCSGG	2 cut(s)	1203, 1292
AsuHPI	GGTGA	4 cut(s)	5, 580, 1396, 1586
AvaI	CYCGRG	1 cut(s)	369
AvaII	GGWCC	3 cut(s)	150, 1303, 1515
BaeGI	GKGCMC	1 cut(s)	582
BaeI	ACNNNNGTAYC	2 cut(s)	552, 585
BanI	GGYRCC	1 cut(s)	680
BanII	GRGCYC	1 cut(s)	1182
BbsI	GAAGAC	2 cut(s)	1383, 1570
Bbv12I	GWGCWC	2 cut(s)	582, 1182
BbvI	GCAGC	4 cut(s)	349, 437, 1009, 1033
BccI	CCATC	6 cut(s)	190, 215, 268, 1255, 1430, 1565
BceAI	ACGGC	4 cut(s)	113, 650, 1102, 1303
BciT130I	CCWGG	4 cut(s)	417, 954, 1382, 1403
BcnI	CCSGG	2 cut(s)	1203, 1292
BcoDI	GTCTC	8 cut(s)	64, 353, 449, 673, 797, 1049, 1145, 1457
BfaI	CTAG	2 cut(s)	69, 1554
BfmI	CTRYAG	1 cut(s)	1019
BfoI	RGCGCY	3 cut(s)	684, 941, 1459
BfuAI	ACCTGC	1 cut(s)	815
BglI	GCCNNNNNGGC	2 cut(s)	170, 958
BisI	GCNGC	8 cut(s)	28, 338, 426, 962, 992, 995, 998, 1022
BlsI	GCNGC	8 cut(s)	29, 339, 427, 963, 993, 996, 999, 1023
Bme1390I	CCNGG	6 cut(s)	417, 954, 1203, 1292, 1382, 1403
Bme18I	GGWCC	3 cut(s)	150, 1303, 1515
BmeRI	GACNNNNNGTC	1 cut(s)	322
BmeT110I	CYCGRG	1 cut(s)	369
BmgBI	CACGTC	1 cut(s)	886
BmgT120I	GGNCC	8 cut(s)	150, 959, 989, 1042, 1289, 1303, 1367, 1515
BmiI	GGNNCC	5 cut(s)	281, 682, 1116, 1484, 1517
BmrFI	CCNGG	6 cut(s)	417, 954, 1203, 1292, 1382, 1403
BmsI	GCATC	4 cut(s)	509, 541, 780, 903
BpiI	GAAGAC	2 cut(s)	1383, 1570
BpmI	CTGGAG	3 cut(s)	266, 1133, 1318
BpuEI	CTTGAG	2 cut(s)	212, 732
BpuMI	CCSGG	2 cut(s)	1203, 1292
BsaHI	GRCGYC	5 cut(s)	318, 681, 1014, 1065, 1131
BsaI	GGTCTC	5 cut(s)	353, 797, 1049, 1145, 1457
BsaJI	CCNNGG	6 cut(s)	530, 600, 1059, 1155, 1202, 1402
BsaWI	WCCGGW	1 cut(s)	1485
BsaXI	ACNNNNNCTCC	4 cut(s)	1316, 1346, 1346, 1376
Bsc4I	CCNNNNNNNGG	5 cut(s)	84, 369, 370, 751, 1051
Bse118I	RCCGGY	5 cut(s)	677, 922, 964, 1485, 1499
Bse1I	ACTGG	1 cut(s)	1517
Bse3DI	GCAATG	2 cut(s)	923, 1319
BseBI	CCWGG	4 cut(s)	417, 954, 1382, 1403
BseDI	CCNNGG	6 cut(s)	530, 600, 1059, 1155, 1202, 1402
BseGI	GGATG	3 cut(s)	121, 260, 918
BseLI	CCNNNNNNNGG	5 cut(s)	84, 369, 370, 751, 1051
BseMI	GCAATG	2 cut(s)	923, 1319
BseMII	CTCAG	2 cut(s)	347, 418
BseNI	ACTGG	1 cut(s)	1517
BseRI	GAGGAG	2 cut(s)	104, 107
BseSI	GKGCMC	1 cut(s)	582
BseXI	GCAGC	4 cut(s)	349, 437, 1009, 1033
Bsh1236I	CGCG	3 cut(s)	638, 1052, 1198
Bsh1285I	CGRYCG	1 cut(s)	1202
BshNI	GGYRCC	1 cut(s)	680
BshTI	ACCGGT	1 cut(s)	1485
BsiEI	CGRYCG	1 cut(s)	1202
BsiHKAI	GWGCWC	2 cut(s)	582, 1182
BsiHKCI	CYCGRG	1 cut(s)	369
BsiSI	CCGG	9 cut(s)	273, 678, 923, 965, 1001, 1202, 1292, 1486, 1500
BslFI	GGGAC	1 cut(s)	1457
BslI	CCNNNNNNNGG	5 cut(s)	84, 369, 370, 751, 1051
BsmAI	GTCTC	8 cut(s)	64, 353, 449, 673, 797, 1049, 1145, 1457
BsmBI	CGTCTC	2 cut(s)	64, 673
BsmFI	GGGAC	1 cut(s)	1457
BsmI	GAATGC	1 cut(s)	860
Bso31I	GGTCTC	5 cut(s)	353, 797, 1049, 1145, 1457
BsoBI	CYCGRG	1 cut(s)	369
Bsp1286I	GDGCHC	2 cut(s)	582, 1182
Bsp143I	GATC	3 cut(s)	265, 400, 1108
Bsp19I	CCATGG	1 cut(s)	1059
BspACI	CCGC	9 cut(s)	27, 30, 870, 962, 992, 995, 1052, 1160, 1480
BspCNI	CTCAG	2 cut(s)	346, 417
BspFNI	CGCG	3 cut(s)	638, 1052, 1198
BspLI	GGNNCC	5 cut(s)	281, 682, 1116, 1484, 1517
BspMAI	CTGCAG	1 cut(s)	1023
BspMI	ACCTGC	1 cut(s)	815
BspT107I	GGYRCC	1 cut(s)	680
BspTNI	GGTCTC	5 cut(s)	353, 797, 1049, 1145, 1457
BsrDI	GCAATG	2 cut(s)	923, 1319
BsrFI	RCCGGY	5 cut(s)	677, 922, 964, 1485, 1499
BsrI	ACTGG	1 cut(s)	1517
BssAI	RCCGGY	5 cut(s)	677, 922, 964, 1485, 1499
BssECI	CCNNGG	6 cut(s)	530, 600, 1059, 1155, 1202, 1402
BssMI	GATC	3 cut(s)	265, 400, 1108
BssNI	GRCGYC	5 cut(s)	318, 681, 1014, 1065, 1131
BssT1I	CCWWGG	2 cut(s)	1059, 1155
Bst2UI	CCWGG	4 cut(s)	417, 954, 1382, 1403
Bst4CI	ACNGT	5 cut(s)	247, 477, 1100, 1307, 1538
BstACI	GRCGYC	5 cut(s)	318, 681, 1014, 1065, 1131
BstAPI	GCANNNNNTGC	1 cut(s)	913
BstC8I	GCNNGC	4 cut(s)	278, 924, 936, 942
BstDEI	CTNAG	2 cut(s)	333, 404
BstDSI	CCRYGG	1 cut(s)	1059
BstF5I	GGATG	3 cut(s)	121, 260, 918
BstFNI	CGCG	3 cut(s)	638, 1052, 1198
BstH2I	RGCGCY	3 cut(s)	684, 941, 1459
BstHHI	GCGC	5 cut(s)	640, 683, 940, 1198, 1458
BstKTI	GATC	3 cut(s)	268, 403, 1111
BstMAI	GTCTC	8 cut(s)	64, 353, 449, 673, 797, 1049, 1145, 1457
BstMBI	GATC	3 cut(s)	265, 400, 1108
BstMCI	CGRYCG	1 cut(s)	1202
BstNI	CCWGG	4 cut(s)	417, 954, 1382, 1403
BstNSI	RCATGY	1 cut(s)	1434
BstSCI	CCNGG	6 cut(s)	415, 952, 1201, 1290, 1380, 1401
BstSFI	CTRYAG	1 cut(s)	1019
BstSLI	GKGCMC	1 cut(s)	582
BstUI	CGCG	3 cut(s)	638, 1052, 1198
BstV1I	GCAGC	4 cut(s)	349, 437, 1009, 1033
BstV2I	GAAGAC	2 cut(s)	1383, 1570
BtgI	CCRYGG	1 cut(s)	1059
BtrI	CACGTC	1 cut(s)	886
BtsCI	GGATG	3 cut(s)	121, 260, 918
BtsI	GCAGTG	3 cut(s)	834, 1183, 1481
BtsIMutI	CAGTG	4 cut(s)	834, 1183, 1481, 1543
BveI	ACCTGC	1 cut(s)	815
Cac8I	GCNNGC	4 cut(s)	278, 924, 936, 942
CfoI	GCGC	5 cut(s)	640, 683, 940, 1198, 1458
Cfr10I	RCCGGY	5 cut(s)	677, 922, 964, 1485, 1499
Cfr13I	GGNCC	8 cut(s)	150, 959, 989, 1042, 1289, 1303, 1367, 1515
CseI	GACGC	4 cut(s)	644, 1022, 1054, 1480
CsiI	ACCWGGT	1 cut(s)	1380
Csp6I	GTAC	2 cut(s)	397, 881
CspAI	ACCGGT	1 cut(s)	1485
CspCI	CAANNNNNGTGG	2 cut(s)	688, 723
CviQI	GTAC	2 cut(s)	397, 881
DdeI	CTNAG	2 cut(s)	333, 404
DinI	GGCGCC	1 cut(s)	682
DpnI	GATC	3 cut(s)	267, 402, 1110
DpnII	GATC	3 cut(s)	265, 400, 1108
DrdI	GACNNNNNNGTC	1 cut(s)	641
DriI	GACNNNNNGTC	1 cut(s)	322
DseDI	GACNNNNNNGTC	1 cut(s)	641
EaeI	YGGCCR	6 cut(s)	126, 162, 171, 533, 630, 920
Eam1105I	GACNNNNNGTC	1 cut(s)	322
EciI	GGCGGA	2 cut(s)	45, 1495
Ecl136II	GAGCTC	1 cut(s)	1180
Eco130I	CCWWGG	2 cut(s)	1059, 1155
Eco147I	AGGCCT	1 cut(s)	952
Eco24I	GRGCYC	1 cut(s)	1182
Eco31I	GGTCTC	5 cut(s)	353, 797, 1049, 1145, 1457
Eco47I	GGWCC	3 cut(s)	150, 1303, 1515
Eco47III	AGCGCT	1 cut(s)	939
Eco53kI	GAGCTC	1 cut(s)	1180
Eco57I	CTGAAG	2 cut(s)	770, 923
Eco88I	CYCGRG	1 cut(s)	369
EcoICRI	GAGCTC	1 cut(s)	1180
EcoRII	CCWGG	4 cut(s)	415, 952, 1380, 1401
EcoT14I	CCWWGG	2 cut(s)	1059, 1155
EcoT38I	GRGCYC	1 cut(s)	1182
EgeI	GGCGCC	1 cut(s)	682
EheI	GGCGCC	1 cut(s)	682
ErhI	CCWWGG	2 cut(s)	1059, 1155
Esp3I	CGTCTC	2 cut(s)	64, 673
FaqI	GGGAC	1 cut(s)	1457
FblI	GTMKAC	2 cut(s)	741, 1506
Fnu4HI	GCNGC	8 cut(s)	28, 338, 426, 962, 992, 995, 998, 1022
FokI	GGATG	3 cut(s)	128, 247, 925
FriOI	GRGCYC	1 cut(s)	1182
Fsp4HI	GCNGC	8 cut(s)	28, 338, 426, 962, 992, 995, 998, 1022
FspBI	CTAG	2 cut(s)	69, 1554
GlaI	GCGC	5 cut(s)	639, 682, 939, 1197, 1457
GluI	GCNGC	8 cut(s)	28, 338, 426, 962, 992, 995, 998, 1022
GsuI	CTGGAG	3 cut(s)	266, 1133, 1318
HaeII	RGCGCY	3 cut(s)	684, 941, 1459
HapII	CCGG	9 cut(s)	273, 678, 923, 965, 1001, 1202, 1292, 1486, 1500
HgaI	GACGC	4 cut(s)	644, 1022, 1054, 1480
HhaI	GCGC	5 cut(s)	640, 683, 940, 1198, 1458
Hin1I	GRCGYC	5 cut(s)	318, 681, 1014, 1065, 1131
Hin6I	GCGC	5 cut(s)	638, 681, 938, 1196, 1456
HinP1I	GCGC	5 cut(s)	638, 681, 938, 1196, 1456
HincII	GTYRAC	1 cut(s)	1165
HindII	GTYRAC	1 cut(s)	1165
HindIII	AAGCTT	1 cut(s)	179
HinfI	GANTC	7 cut(s)	101, 738, 755, 1243, 1279, 1316, 1346
HpaII	CCGG	9 cut(s)	273, 678, 923, 965, 1001, 1202, 1292, 1486, 1500
HphI	GGTGA	4 cut(s)	5, 580, 1396, 1586
Hpy166II	GTNNAC	5 cut(s)	580, 742, 883, 1165, 1507
Hpy188I	TCNGA	9 cut(s)	154, 241, 265, 298, 394, 407, 778, 789, 1393
Hpy188III	TCNNGA	7 cut(s)	105, 283, 749, 854, 1112, 1301, 1554
Hpy8I	GTNNAC	5 cut(s)	580, 742, 883, 1165, 1507
Hpy99I	CGWCG	7 cut(s)	320, 638, 729, 890, 893, 1070, 1133
HpyAV	CCTTC	3 cut(s)	619, 1401, 1537
HpyCH4III	ACNGT	5 cut(s)	247, 477, 1100, 1307, 1538
HpyCH4IV	ACGT	6 cut(s)	53, 318, 727, 885, 1131, 1422
HpyF3I	CTNAG	2 cut(s)	333, 404
HpySE526I	ACGT	6 cut(s)	53, 318, 727, 885, 1131, 1422
Hsp92I	GRCGYC	5 cut(s)	318, 681, 1014, 1065, 1131
HspAI	GCGC	5 cut(s)	638, 681, 938, 1196, 1456
KasI	GGCGCC	1 cut(s)	680
KroI	GCCGGC	1 cut(s)	922
KroNI	GCCGGC	1 cut(s)	924
Kzo9I	GATC	3 cut(s)	265, 400, 1108
LmnI	GCTCC	6 cut(s)	94, 285, 1114, 1185, 1267, 1453
Lsp1109I	GCAGC	4 cut(s)	349, 437, 1009, 1033
LweI	GCATC	4 cut(s)	509, 541, 780, 903
MabI	ACCWGGT	1 cut(s)	1380
MaeI	CTAG	2 cut(s)	69, 1554
MaeII	ACGT	6 cut(s)	53, 318, 727, 885, 1131, 1422
MaeIII	GTNAC	1 cut(s)	1255
MalI	GATC	3 cut(s)	267, 402, 1110
MboI	GATC	3 cut(s)	265, 400, 1108
MfeI	CAATTG	3 cut(s)	309, 443, 489
MhlI	GDGCHC	2 cut(s)	582, 1182
MluCI	AATT	9 cut(s)	81, 309, 443, 489, 821, 1037, 1046, 1542, 1548
Mly113I	GGCGCC	1 cut(s)	681
MlyI	GAGTC	3 cut(s)	747, 1325, 1340
MmeI	TCCRAC	3 cut(s)	1013, 1332, 1371
MroNI	GCCGGC	1 cut(s)	922
MspI	CCGG	9 cut(s)	273, 678, 923, 965, 1001, 1202, 1292, 1486, 1500
MspR9I	CCNGG	6 cut(s)	417, 954, 1203, 1292, 1382, 1403
MunI	CAATTG	3 cut(s)	309, 443, 489
Mva1269I	GAATGC	1 cut(s)	860
MvaI	CCWGG	4 cut(s)	417, 954, 1382, 1403
MvnI	CGCG	3 cut(s)	638, 1052, 1198
NaeI	GCCGGC	1 cut(s)	924
NarI	GGCGCC	1 cut(s)	681
NciI	CCSGG	2 cut(s)	1203, 1292
NcoI	CCATGG	1 cut(s)	1059
NdeII	GATC	3 cut(s)	265, 400, 1108
NgoMIV	GCCGGC	1 cut(s)	922
NlaIV	GGNNCC	5 cut(s)	281, 682, 1116, 1484, 1517
NmeAIII	GCCGAG	5 cut(s)	199, 511, 625, 1395, 1520
NspI	RCATGY	1 cut(s)	1434
PceI	AGGCCT	1 cut(s)	952
PcsI	WCGNNNNNNNCGW	1 cut(s)	1367
PctI	GAATGC	1 cut(s)	860
PdiI	GCCGGC	1 cut(s)	924
PfeI	GAWTC	4 cut(s)	101, 755, 1243, 1279
PflFI	GACNNNGTC	1 cut(s)	317
PflMI	CCANNNNNTGG	1 cut(s)	84
PinAI	ACCGGT	1 cut(s)	1485
PkrI	GCNGC	8 cut(s)	29, 339, 427, 963, 993, 996, 999, 1023
PleI	GAGTC	3 cut(s)	746, 1324, 1340
PluTI	GGCGCC	1 cut(s)	684
PpsI	GAGTC	3 cut(s)	746, 1324, 1340
Psp124BI	GAGCTC	1 cut(s)	1182
Psp6I	CCWGG	4 cut(s)	415, 952, 1380, 1401
PspGI	CCWGG	4 cut(s)	415, 952, 1380, 1401
PspN4I	GGNNCC	5 cut(s)	281, 682, 1116, 1484, 1517
PspPI	GGNCC	8 cut(s)	150, 959, 989, 1042, 1289, 1303, 1367, 1515
PstI	CTGCAG	1 cut(s)	1023
PsyI	GACNNNGTC	1 cut(s)	317
RsaI	GTAC	2 cut(s)	398, 882
RsaNI	GTAC	2 cut(s)	397, 881
SacI	GAGCTC	1 cut(s)	1182
SatI	GCNGC	8 cut(s)	28, 338, 426, 962, 992, 995, 998, 1022
Sau3AI	GATC	3 cut(s)	265, 400, 1108
Sau96I	GGNCC	8 cut(s)	150, 959, 989, 1042, 1289, 1303, 1367, 1515
SchI	GAGTC	3 cut(s)	747, 1325, 1340
ScrFI	CCNGG	6 cut(s)	417, 954, 1203, 1292, 1382, 1403
SduI	GDGCHC	2 cut(s)	582, 1182
SexAI	ACCWGGT	1 cut(s)	1380
SfaNI	GCATC	4 cut(s)	509, 541, 780, 903
SfcI	CTRYAG	1 cut(s)	1019
SfiI	GGCCNNNNNGGCC	2 cut(s)	170, 958
SfoI	GGCGCC	1 cut(s)	682
SgrAI	CRCCGGYG	1 cut(s)	964
SinI	GGWCC	3 cut(s)	150, 1303, 1515
SmlI	CTYRAG	2 cut(s)	191, 747
SmoI	CTYRAG	2 cut(s)	191, 747
Sse9I	AATT	9 cut(s)	81, 309, 443, 489, 821, 1037, 1046, 1542, 1548
SseBI	AGGCCT	1 cut(s)	952
SsiI	CCGC	9 cut(s)	27, 30, 870, 962, 992, 995, 1052, 1160, 1480
SspDI	GGCGCC	1 cut(s)	680
SspMI	CTAG	2 cut(s)	69, 1554
SstI	GAGCTC	1 cut(s)	1182
StuI	AGGCCT	1 cut(s)	952
StyD4I	CCNGG	6 cut(s)	415, 952, 1201, 1290, 1380, 1401
StyI	CCWWGG	2 cut(s)	1059, 1155
TaaI	ACNGT	5 cut(s)	247, 477, 1100, 1307, 1538
TaiI	ACGT	6 cut(s)	56, 321, 730, 888, 1134, 1425
TaqI	TCGA	7 cut(s)	521, 855, 891, 1068, 1074, 1128, 1176
TasI	AATT	9 cut(s)	81, 309, 443, 489, 821, 1037, 1046, 1542, 1548
TatI	WGTACW	1 cut(s)	880
TauI	GCSGC	4 cut(s)	30, 964, 994, 997
TfiI	GAWTC	4 cut(s)	101, 755, 1243, 1279
TscAI	CASTG	4 cut(s)	841, 1190, 1481, 1543
TseI	GCWGC	4 cut(s)	337, 425, 997, 1021
TspDTI	ATGAA	3 cut(s)	17, 239, 1256
TspGWI	ACGGA	2 cut(s)	46, 1124
TspRI	CASTG	4 cut(s)	841, 1190, 1481, 1543
Tth111I	GACNNNGTC	1 cut(s)	317
Van91I	CCANNNNNTGG	1 cut(s)	84
VneI	GTGCAC	1 cut(s)	578
VpaK11BI	GGWCC	3 cut(s)	150, 1303, 1515
XapI	RAATTY	2 cut(s)	81, 821
XbaI	TCTAGA	1 cut(s)	1553
XceI	RCATGY	1 cut(s)	1434
XmiI	GTMKAC	2 cut(s)	741, 1506
XspI	CTAG	2 cut(s)	69, 1554
ZraI	GACGTC	2 cut(s)	319, 1132

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.