Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0010801

Physical Location & Seq

Genomic Coordinates Reverse (-)

38456230 .. 38458983

Gene Structure 2754 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG307700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGAAGCGAAATCACCAAGTGAGTTGCGGCGGAGGTCAAAATGGTAGCAATACGTCCGTCTCGAATAGTAGCAAGGCCAAAATTTGGGAGGAGGAGCAAGAATCTGGAAGCATGGATGAGTTATTGGCCGTTTTGGGCTATAAAGTCAGGTCCGATGACATGGCCGATGTGGCCGAGAAGCTTGAACAGCTTGAGATGGTCATGGGTTCAGCTCAACAAGATGGGATTTCACAGCTTTCCGATACAGTTCATTACAACCCATCCGATCTCTCCGGCTGGCTCCAGACCATGCTCATGGAACTCAACCCAATTGACGACGACTTGTCAAACTCTCAGCAGCAGAAGCAGAAGCAGAAACAGAAGCAGAAGCAGATTGAGACCCAATCTCGGGTCATTTACGATGACAACTCCGAGTACGATCTCAGAGCCATTCCTGGTATTGCAGCCTACCCACAATCCCAATTGCAAACCGAGACTGAAATCAATAGCAAACGGTTGAAAACCTCAACTGGTTCGGCATCATCATCTTCTTCTTCGGTTGAGCCTCGGCCGCTCGTTGTGGTTGATGCACAGGATACAGGGGTGAGATTGGTGCACACACTCTTGGCCTGTGCCGAGGCTGTTCAGCAAGACAACTTGAAGGTGGCCGACGCGCTCGTCAAGCAAGTAGGCACACTCGCCGTCTCCCAGACCGGCGCTATGAGAAAGGTCGCCACTTACTTTGCAGAAGCCCTTGCTCGACGTATTTACAGAGTCTACCCTCAAGAGGATTCTCTCGTTTCTTCCTACTCGGATATTCTTCAGATGCACTTCTACGAGACCTGCCCTTACCTCAAATTTGCCCACTTCACTGCCAATCAAGCTATTCTCGAAGCATTCGCCACCGCAACCAGCGTACACGTCGTCGATTTCGGGCTGAAGCAAGGGATGCAATGGCCGGCTCTGATGCAAGCGCTCGCATTGAGGCCTGGTGGGCCGCCGGTGTTTCGGCTTACGGGTGTTGGGCCGCCGCAGCCGGACAACACAGACGCCCTGCAGCAAGTGGGTTGGAAATTGGCCCAATTCGCGGATACCATGGGCGTCGAGTTCGAGTTTCGAGGTTTGGTCGCAAACAGTTTGGCTGATCTGGAGCCCTCAATGCTCCACGTCCGTCCGCCGGAAGTAGAGACCTTGGCGGTCAACTCTGTTTTCGAGCTCCACTGCCTGTTGGCGCGACCGGGGGCGATAGAGAAAGTCATGGCTTCAATCAAAGCCATGAATCCCAAGATTGTTACGATGGTGGAGCAGGAGGCGAATCATAACGGCCCGGTTTTTCTGGACCGGTTCAACGAGTCATTGCATTATTACTCCAGCTTATTTGACTCGTTGGAGGGTTCGTCTGGGTCGAGTGAAGACCTGGTCATGTCGGAGGTGTACCTGGGAAGGCAGATATGCAACGTGGTGGCATGTGATGGTGGGGACAGAGTGGAGCGCCATGAGACCCTGACGCAGTGGCGGAACCGGTTGAGCCGAGCCGGGTTCGAACCGGTTCATCTGGGATCCAACGTGTTCAAGCAGGCGAAGACGTTGCTGGCGCTTTACGCCGGCGGAGGTGGGTATCAGGTGGAGGAGAACAATGGGTCTCTCATGCTTGGGTGGCACACACGGCCTCTCATCGCCACCTCGGCTTGGCAACTGGCGAGTCCGACTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0006972 GO:0007154 GO:0007165 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009751 GO:0009753 GO:0009755 GO:0009863 GO:0009867 GO:0009889 GO:0009937 GO:0009938 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010033 GO:0010187 GO:0010468 GO:0010556 GO:0010646 GO:0010648 GO:0014070 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031326 GO:0032870 GO:0033993 GO:0035690 GO:0042221 GO:0042493 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0046677 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0080050 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1900140 GO:1901363 GO:1901700 GO:1901701 GO:1903506 GO:2000026 GO:2000033 GO:2000034 GO:2000112 GO:2000241 GO:2000377 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DELLA GRAS

Protein Analysis

564

Amino Acids

62.03

Weight (kDa)

5.18

Isoelectric Point (pI)

49.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DELLA	PF12041	39 - 104	6.8e-33	Transcriptional regulator DELLA protein N terminal
GRAS	PF03514	197 - 558	8.4e-137	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010801)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66350 AT3G03450 AT5G17490
malus_domestica	MD09G1264800.v1.1 MD17G1260700.v1.1
prunus_persica	Prupe.3G162500_v2.0.a1
pyrus_communis	pycom09g17840 pycom17g26140
rosa_chinensis	RchiOBHm_Chr3g0493011
rosa_laevigata	RLG00000022733
rosa_multiflora	Rmu_co8350645.1_g000001 Rmu_co8421333.1_g000001 Rmu_sc0003941.1_g000002
rosa_roxburghii	Rroxscaffold_6G00391950
rosa_rugosa	Rorug03G0258700
rosa_samantha	Rh3AG307700 Rh3BG343100 Rh3CG340500 Rh3DG342800
rosa_wichuraiana	Rw3G027060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	656
Acc36I	ACCTGC	1 cut(s)	830
AccB7I	CCANNNNNTGG	1 cut(s)	84
AccBSI	CCGCTC	1 cut(s)	553
AccI	GTMKAC	1 cut(s)	756
AccII	CGCG	3 cut(s)	653, 1067, 1213
AclWI	GGATC	2 cut(s)	1533, 1546
AcoI	YGGCCR	6 cut(s)	126, 162, 171, 548, 645, 935
AcsI	RAATTY	2 cut(s)	81, 836
AcuI	CTGAAG	2 cut(s)	785, 938
AcyI	GRCGYC	2 cut(s)	1029, 1080
AdeI	CACNNNGTG	1 cut(s)	19
AfaI	GTAC	3 cut(s)	416, 897, 1415
AfeI	AGCGCT	1 cut(s)	954
AfiI	CCNNNNNNNGG	7 cut(s)	84, 387, 388, 766, 1066, 1156, 1668
AflIII	ACRYGT	2 cut(s)	898, 1545
AgeI	ACCGGT	3 cut(s)	1320, 1500, 1525
AgsI	TTSAA	6 cut(s)	185, 499, 640, 1245, 1327, 1552
AhdI	GACNNNNNGTC	1 cut(s)	322
AjiI	CACGTC	2 cut(s)	901, 1147
AjnI	CCWGG	4 cut(s)	433, 967, 1395, 1416
AluBI	AGCT	7 cut(s)	181, 190, 212, 235, 863, 1195, 1353
AluI	AGCT	7 cut(s)	181, 190, 212, 235, 863, 1195, 1353
Alw21I	GWGCWC	2 cut(s)	597, 1197
Alw26I	GTCTC	8 cut(s)	64, 371, 467, 688, 812, 1160, 1472, 1626
Alw44I	GTGCAC	1 cut(s)	593
AlwI	GGATC	2 cut(s)	1533, 1546
Ama87I	CYCGRG	1 cut(s)	387
Aor51HI	AGCGCT	1 cut(s)	954
ApaLI	GTGCAC	1 cut(s)	593
ApeKI	GCWGC	4 cut(s)	337, 443, 1012, 1036
ApoI	RAATTY	2 cut(s)	81, 836
AsiGI	ACCGGT	3 cut(s)	1320, 1500, 1525
Asp700I	GAANNNNTTC	1 cut(s)	1527
AspLEI	GCGC	6 cut(s)	655, 698, 955, 1213, 1473, 1576
AspS9I	GGNCC	6 cut(s)	150, 974, 1004, 1057, 1304, 1318
AsuC2I	CCSGG	3 cut(s)	1218, 1307, 1516
AsuHPI	GGTGA	2 cut(s)	5, 595
AsuII	TTCGAA	1 cut(s)	1521
AvaI	CYCGRG	1 cut(s)	387
AvaII	GGWCC	2 cut(s)	150, 1318
BaeGI	GKGCMC	1 cut(s)	597
BaeI	ACNNNNGTAYC	2 cut(s)	567, 600
BamHI	GGATCC	1 cut(s)	1538
BanII	GRGCYC	2 cut(s)	1134, 1197
BbsI	GAAGAC	2 cut(s)	1398, 1568
Bbv12I	GWGCWC	2 cut(s)	597, 1197
BbvI	GCAGC	4 cut(s)	349, 455, 1024, 1048
BccI	CCATC	5 cut(s)	190, 215, 268, 1270, 1445
BceAI	ACGGC	4 cut(s)	113, 665, 1318, 1661
BcgI	CGANNNNNNTGC	2 cut(s)	1549, 1583
BciT130I	CCWGG	4 cut(s)	435, 969, 1397, 1418
BciVI	GTATCC	2 cut(s)	568, 1063
BcnI	CCSGG	3 cut(s)	1218, 1307, 1516
BcoDI	GTCTC	8 cut(s)	64, 371, 467, 688, 812, 1160, 1472, 1626
BfmI	CTRYAG	1 cut(s)	1034
BfoI	RGCGCY	4 cut(s)	699, 956, 1474, 1577
BfuAI	ACCTGC	1 cut(s)	830
BfuI	GTATCC	2 cut(s)	568, 1063
BglI	GCCNNNNNGGC	3 cut(s)	170, 973, 1664
BisI	GCNGC	9 cut(s)	28, 338, 444, 551, 977, 1007, 1010, 1013, 1037
BlsI	GCNGC	9 cut(s)	29, 339, 445, 552, 978, 1008, 1011, 1014, 1038
Bme1390I	CCNGG	7 cut(s)	435, 969, 1218, 1307, 1397, 1418, 1516
Bme18I	GGWCC	2 cut(s)	150, 1318
BmeRI	GACNNNNNGTC	1 cut(s)	322
BmeT110I	CYCGRG	1 cut(s)	387
BmgBI	CACGTC	2 cut(s)	901, 1147
BmgT120I	GGNCC	6 cut(s)	150, 974, 1004, 1057, 1304, 1318
BmiI	GGNNCC	4 cut(s)	281, 1131, 1499, 1540
BmrFI	CCNGG	7 cut(s)	435, 969, 1218, 1307, 1397, 1418, 1516
BmsI	GCATC	5 cut(s)	527, 556, 795, 918, 936
BpiI	GAAGAC	2 cut(s)	1398, 1568
BplI	GAGNNNNNCTC	1 cut(s)	1672
BpmI	CTGGAG	3 cut(s)	266, 1148, 1333
Bpu14I	TTCGAA	1 cut(s)	1521
BpuEI	CTTGAG	2 cut(s)	212, 747
BpuMI	CCSGG	3 cut(s)	1218, 1307, 1516
BsaHI	GRCGYC	2 cut(s)	1029, 1080
BsaI	GGTCTC	5 cut(s)	371, 812, 1160, 1472, 1626
BsaJI	CCNNGG	7 cut(s)	545, 615, 1074, 1170, 1217, 1417, 1662
BsaWI	WCCGGW	3 cut(s)	1320, 1500, 1525
BsaXI	ACNNNNNCTCC	2 cut(s)	1361, 1391
Bsc4I	CCNNNNNNNGG	7 cut(s)	84, 387, 388, 766, 1066, 1156, 1668
Bse118I	RCCGGY	7 cut(s)	692, 937, 979, 1320, 1500, 1525, 1583
Bse1I	ACTGG	2 cut(s)	514, 1680
Bse3DI	GCAATG	2 cut(s)	938, 1334
BseBI	CCWGG	4 cut(s)	435, 969, 1397, 1418
BseDI	CCNNGG	7 cut(s)	545, 615, 1074, 1170, 1217, 1417, 1662
BseGI	GGATG	3 cut(s)	121, 260, 933
BseLI	CCNNNNNNNGG	7 cut(s)	84, 387, 388, 766, 1066, 1156, 1668
BseMI	GCAATG	2 cut(s)	938, 1334
BseMII	CTCAG	2 cut(s)	347, 436
BseNI	ACTGG	2 cut(s)	514, 1680
BseRI	GAGGAG	3 cut(s)	104, 107, 1622
BseSI	GKGCMC	1 cut(s)	597
BseX3I	CGGCCG	1 cut(s)	548
BseXI	GCAGC	4 cut(s)	349, 455, 1024, 1048
Bsh1236I	CGCG	3 cut(s)	653, 1067, 1213
Bsh1285I	CGRYCG	2 cut(s)	551, 1217
BshTI	ACCGGT	3 cut(s)	1320, 1500, 1525
BsiEI	CGRYCG	2 cut(s)	551, 1217
BsiHKAI	GWGCWC	2 cut(s)	597, 1197
BsiHKCI	CYCGRG	1 cut(s)	387
BslFI	GGGAC	1 cut(s)	1472
BslI	CCNNNNNNNGG	7 cut(s)	84, 387, 388, 766, 1066, 1156, 1668
BsmAI	GTCTC	8 cut(s)	64, 371, 467, 688, 812, 1160, 1472, 1626
BsmBI	CGTCTC	2 cut(s)	64, 688
BsmFI	GGGAC	1 cut(s)	1472
BsmI	GAATGC	1 cut(s)	875
Bso31I	GGTCTC	5 cut(s)	371, 812, 1160, 1472, 1626
BsoBI	CYCGRG	1 cut(s)	387
Bsp119I	TTCGAA	1 cut(s)	1521
Bsp1286I	GDGCHC	3 cut(s)	597, 1134, 1197
Bsp143I	GATC	4 cut(s)	265, 418, 1123, 1538
Bsp19I	CCATGG	1 cut(s)	1074
BspCNI	CTCAG	2 cut(s)	346, 435
BspFNI	CGCG	3 cut(s)	653, 1067, 1213
BspLI	GGNNCC	4 cut(s)	281, 1131, 1499, 1540
BspMAI	CTGCAG	1 cut(s)	1038
BspMI	ACCTGC	1 cut(s)	830
BspPI	GGATC	2 cut(s)	1533, 1546
BspT104I	TTCGAA	1 cut(s)	1521
BspTNI	GGTCTC	5 cut(s)	371, 812, 1160, 1472, 1626
BsrBI	CCGCTC	1 cut(s)	553
BsrDI	GCAATG	2 cut(s)	938, 1334
BsrFI	RCCGGY	7 cut(s)	692, 937, 979, 1320, 1500, 1525, 1583
BsrI	ACTGG	2 cut(s)	514, 1680
BssAI	RCCGGY	7 cut(s)	692, 937, 979, 1320, 1500, 1525, 1583
BssECI	CCNNGG	7 cut(s)	545, 615, 1074, 1170, 1217, 1417, 1662
BssMI	GATC	4 cut(s)	265, 418, 1123, 1538
BssNI	GRCGYC	2 cut(s)	1029, 1080
BssT1I	CCWWGG	2 cut(s)	1074, 1170
Bst2UI	CCWGG	4 cut(s)	435, 969, 1397, 1418
Bst4CI	ACNGT	3 cut(s)	247, 495, 1115
BstACI	GRCGYC	2 cut(s)	1029, 1080
BstAPI	GCANNNNNTGC	1 cut(s)	928
BstBI	TTCGAA	1 cut(s)	1521
BstC8I	GCNNGC	7 cut(s)	278, 939, 951, 957, 1557, 1572, 1585
BstDEI	CTNAG	3 cut(s)	333, 422, 1689
BstDSI	CCRYGG	1 cut(s)	1074
BstF5I	GGATG	3 cut(s)	121, 260, 933
BstFNI	CGCG	3 cut(s)	653, 1067, 1213
BstH2I	RGCGCY	4 cut(s)	699, 956, 1474, 1577
BstHHI	GCGC	6 cut(s)	655, 698, 955, 1213, 1473, 1576
BstKTI	GATC	4 cut(s)	268, 421, 1126, 1541
BstMAI	GTCTC	8 cut(s)	64, 371, 467, 688, 812, 1160, 1472, 1626
BstMBI	GATC	4 cut(s)	265, 418, 1123, 1538
BstMCI	CGRYCG	2 cut(s)	551, 1217
BstNI	CCWGG	4 cut(s)	435, 969, 1397, 1418
BstNSI	RCATGY	1 cut(s)	1449
BstSCI	CCNGG	7 cut(s)	433, 967, 1216, 1305, 1395, 1416, 1514
BstSFI	CTRYAG	1 cut(s)	1034
BstSLI	GKGCMC	1 cut(s)	597
BstUI	CGCG	3 cut(s)	653, 1067, 1213
BstV1I	GCAGC	4 cut(s)	349, 455, 1024, 1048
BstV2I	GAAGAC	2 cut(s)	1398, 1568
BstX2I	RGATCY	1 cut(s)	1538
BstXI	CCANNNNNNTGG	1 cut(s)	295
BstYI	RGATCY	1 cut(s)	1538
BstZI	CGGCCG	1 cut(s)	548
BsuI	GTATCC	2 cut(s)	568, 1063
BtgI	CCRYGG	1 cut(s)	1074
BtgZI	GCGATG	1 cut(s)	1639
BtrI	CACGTC	2 cut(s)	901, 1147
BtsCI	GGATG	3 cut(s)	121, 260, 933
BtsI	GCAGTG	3 cut(s)	849, 1198, 1496
BtsIMutI	CAGTG	3 cut(s)	849, 1198, 1496
BveI	ACCTGC	1 cut(s)	830
Cac8I	GCNNGC	7 cut(s)	278, 939, 951, 957, 1557, 1572, 1585
CfoI	GCGC	6 cut(s)	655, 698, 955, 1213, 1473, 1576
Cfr10I	RCCGGY	7 cut(s)	692, 937, 979, 1320, 1500, 1525, 1583
Cfr13I	GGNCC	6 cut(s)	150, 974, 1004, 1057, 1304, 1318
CseI	GACGC	4 cut(s)	659, 1037, 1069, 1495
CsiI	ACCWGGT	1 cut(s)	1395
Csp6I	GTAC	3 cut(s)	415, 896, 1414
CspAI	ACCGGT	3 cut(s)	1320, 1500, 1525
CspCI	CAANNNNNGTGG	2 cut(s)	703, 738
CviQI	GTAC	3 cut(s)	415, 896, 1414
DdeI	CTNAG	3 cut(s)	333, 422, 1689
DpnI	GATC	4 cut(s)	267, 420, 1125, 1540
DpnII	GATC	4 cut(s)	265, 418, 1123, 1538
DraIII	CACNNNGTG	1 cut(s)	19
DrdI	GACNNNNNNGTC	1 cut(s)	656
DriI	GACNNNNNGTC	1 cut(s)	322
DseDI	GACNNNNNNGTC	1 cut(s)	656
EaeI	YGGCCR	6 cut(s)	126, 162, 171, 548, 645, 935
EagI	CGGCCG	1 cut(s)	548
Eam1105I	GACNNNNNGTC	1 cut(s)	322
EciI	GGCGGA	4 cut(s)	45, 1143, 1510, 1602
Ecl136II	GAGCTC	1 cut(s)	1195
EclXI	CGGCCG	1 cut(s)	548
Eco130I	CCWWGG	2 cut(s)	1074, 1170
Eco147I	AGGCCT	1 cut(s)	967
Eco24I	GRGCYC	2 cut(s)	1134, 1197
Eco31I	GGTCTC	5 cut(s)	371, 812, 1160, 1472, 1626
Eco47I	GGWCC	2 cut(s)	150, 1318
Eco47III	AGCGCT	1 cut(s)	954
Eco52I	CGGCCG	1 cut(s)	548
Eco53kI	GAGCTC	1 cut(s)	1195
Eco57I	CTGAAG	2 cut(s)	785, 938
Eco88I	CYCGRG	1 cut(s)	387
EcoICRI	GAGCTC	1 cut(s)	1195
EcoRII	CCWGG	4 cut(s)	433, 967, 1395, 1416
EcoT14I	CCWWGG	2 cut(s)	1074, 1170
EcoT38I	GRGCYC	2 cut(s)	1134, 1197
ErhI	CCWWGG	2 cut(s)	1074, 1170
Esp3I	CGTCTC	2 cut(s)	64, 688
FaqI	GGGAC	1 cut(s)	1472
FblI	GTMKAC	1 cut(s)	756
Fnu4HI	GCNGC	9 cut(s)	28, 338, 444, 551, 977, 1007, 1010, 1013, 1037
FokI	GGATG	3 cut(s)	128, 247, 940
FriOI	GRGCYC	2 cut(s)	1134, 1197
Fsp4HI	GCNGC	9 cut(s)	28, 338, 444, 551, 977, 1007, 1010, 1013, 1037
GlaI	GCGC	6 cut(s)	654, 697, 954, 1212, 1472, 1575
GluI	GCNGC	9 cut(s)	28, 338, 444, 551, 977, 1007, 1010, 1013, 1037
GsuI	CTGGAG	3 cut(s)	266, 1148, 1333
HaeII	RGCGCY	4 cut(s)	699, 956, 1474, 1577
HgaI	GACGC	4 cut(s)	659, 1037, 1069, 1495
HhaI	GCGC	6 cut(s)	655, 698, 955, 1213, 1473, 1576
Hin1I	GRCGYC	2 cut(s)	1029, 1080
Hin6I	GCGC	6 cut(s)	653, 696, 953, 1211, 1471, 1574
HinP1I	GCGC	6 cut(s)	653, 696, 953, 1211, 1471, 1574
HincII	GTYRAC	1 cut(s)	1180
HindII	GTYRAC	1 cut(s)	1180
HindIII	AAGCTT	1 cut(s)	179
HinfI	GANTC	9 cut(s)	101, 753, 770, 1258, 1294, 1331, 1361, 1681, 1687
HphI	GGTGA	2 cut(s)	5, 595
Hpy166II	GTNNAC	5 cut(s)	595, 757, 898, 1180, 1414
Hpy188III	TCNNGA	7 cut(s)	61, 105, 283, 764, 869, 1127, 1316
Hpy8I	GTNNAC	5 cut(s)	595, 757, 898, 1180, 1414
Hpy99I	CGWCG	6 cut(s)	320, 653, 744, 905, 908, 1085
HpyAV	CCTTC	2 cut(s)	634, 1416
HpyCH4III	ACNGT	3 cut(s)	247, 495, 1115
HpyCH4IV	ACGT	7 cut(s)	53, 742, 900, 1146, 1437, 1545, 1565
HpyF3I	CTNAG	3 cut(s)	333, 422, 1689
HpySE526I	ACGT	7 cut(s)	53, 742, 900, 1146, 1437, 1545, 1565
Hsp92I	GRCGYC	2 cut(s)	1029, 1080
HspAI	GCGC	6 cut(s)	653, 696, 953, 1211, 1471, 1574
KroI	GCCGGC	2 cut(s)	937, 1583
KroNI	GCCGGC	2 cut(s)	939, 1585
Kzo9I	GATC	4 cut(s)	265, 418, 1123, 1538
LmnI	GCTCC	7 cut(s)	94, 285, 1129, 1146, 1200, 1282, 1468
Lsp1109I	GCAGC	4 cut(s)	349, 455, 1024, 1048
LweI	GCATC	5 cut(s)	527, 556, 795, 918, 936
MabI	ACCWGGT	1 cut(s)	1395
MaeII	ACGT	7 cut(s)	53, 742, 900, 1146, 1437, 1545, 1565
MaeIII	GTNAC	1 cut(s)	1270
MalI	GATC	4 cut(s)	267, 420, 1125, 1540
MbiI	CCGCTC	1 cut(s)	553
MboI	GATC	4 cut(s)	265, 418, 1123, 1538
MboII	GAAGA	7 cut(s)	519, 522, 525, 774, 791, 1403, 1573
MfeI	CAATTG	2 cut(s)	309, 461
MflI	RGATCY	1 cut(s)	1538
MhlI	GDGCHC	3 cut(s)	597, 1134, 1197
MluCI	AATT	6 cut(s)	81, 309, 461, 836, 1052, 1061
MlyI	GAGTC	5 cut(s)	762, 1340, 1355, 1681, 1690
MmeI	TCCRAC	4 cut(s)	1028, 1347, 1386, 1566
MreI	CGCCGGCG	1 cut(s)	1583
MroNI	GCCGGC	2 cut(s)	937, 1583
MroXI	GAANNNNTTC	1 cut(s)	1527
MslI	CAYNNNNRTG	1 cut(s)	293
MspR9I	CCNGG	7 cut(s)	435, 969, 1218, 1307, 1397, 1418, 1516
MunI	CAATTG	2 cut(s)	309, 461
Mva1269I	GAATGC	1 cut(s)	875
MvaI	CCWGG	4 cut(s)	435, 969, 1397, 1418
MvnI	CGCG	3 cut(s)	653, 1067, 1213
NaeI	GCCGGC	2 cut(s)	939, 1585
NciI	CCSGG	3 cut(s)	1218, 1307, 1516
NcoI	CCATGG	1 cut(s)	1074
NdeII	GATC	4 cut(s)	265, 418, 1123, 1538
NgoMIV	GCCGGC	2 cut(s)	937, 1583
NlaIV	GGNNCC	4 cut(s)	281, 1131, 1499, 1540
NmeAIII	GCCGAG	5 cut(s)	199, 526, 640, 1535, 1643
NspI	RCATGY	1 cut(s)	1449
NspV	TTCGAA	1 cut(s)	1521
PceI	AGGCCT	1 cut(s)	967
PcsI	WCGNNNNNNNCGW	2 cut(s)	59, 1382
PctI	GAATGC	1 cut(s)	875
PdiI	GCCGGC	2 cut(s)	939, 1585
PdmI	GAANNNNTTC	1 cut(s)	1527
PfeI	GAWTC	4 cut(s)	101, 770, 1258, 1294
PflFI	GACNNNGTC	1 cut(s)	1397
PflMI	CCANNNNNTGG	1 cut(s)	84
PinAI	ACCGGT	3 cut(s)	1320, 1500, 1525
PkrI	GCNGC	9 cut(s)	29, 339, 445, 552, 978, 1008, 1011, 1014, 1038
PleI	GAGTC	5 cut(s)	761, 1339, 1355, 1681, 1689
PpsI	GAGTC	5 cut(s)	761, 1339, 1355, 1681, 1689
Psp124BI	GAGCTC	1 cut(s)	1197
Psp6I	CCWGG	4 cut(s)	433, 967, 1395, 1416
PspGI	CCWGG	4 cut(s)	433, 967, 1395, 1416
PspN4I	GGNNCC	4 cut(s)	281, 1131, 1499, 1540
PspPI	GGNCC	6 cut(s)	150, 974, 1004, 1057, 1304, 1318
PstI	CTGCAG	1 cut(s)	1038
PsuI	RGATCY	1 cut(s)	1538
PsyI	GACNNNGTC	1 cut(s)	1397
RsaI	GTAC	3 cut(s)	416, 897, 1415
RsaNI	GTAC	3 cut(s)	415, 896, 1414
RseI	CAYNNNNRTG	1 cut(s)	293
SacI	GAGCTC	1 cut(s)	1197
SatI	GCNGC	9 cut(s)	28, 338, 444, 551, 977, 1007, 1010, 1013, 1037
Sau3AI	GATC	4 cut(s)	265, 418, 1123, 1538
Sau96I	GGNCC	6 cut(s)	150, 974, 1004, 1057, 1304, 1318
SchI	GAGTC	5 cut(s)	762, 1340, 1355, 1681, 1690
ScrFI	CCNGG	7 cut(s)	435, 969, 1218, 1307, 1397, 1418, 1516
SduI	GDGCHC	3 cut(s)	597, 1134, 1197
SexAI	ACCWGGT	1 cut(s)	1395
SfaNI	GCATC	5 cut(s)	527, 556, 795, 918, 936
SfcI	CTRYAG	1 cut(s)	1034
SfiI	GGCCNNNNNGGCC	2 cut(s)	170, 973
SfuI	TTCGAA	1 cut(s)	1521
SgrAI	CRCCGGYG	2 cut(s)	979, 1583
SinI	GGWCC	2 cut(s)	150, 1318
SmiMI	CAYNNNNRTG	1 cut(s)	293
SmlI	CTYRAG	2 cut(s)	191, 762
SmoI	CTYRAG	2 cut(s)	191, 762
Sse9I	AATT	6 cut(s)	81, 309, 461, 836, 1052, 1061
SseBI	AGGCCT	1 cut(s)	967
SstI	GAGCTC	1 cut(s)	1197
StuI	AGGCCT	1 cut(s)	967
StyD4I	CCNGG	7 cut(s)	433, 967, 1216, 1305, 1395, 1416, 1514
StyI	CCWWGG	2 cut(s)	1074, 1170
TaaI	ACNGT	3 cut(s)	247, 495, 1115
TaiI	ACGT	7 cut(s)	56, 745, 903, 1149, 1440, 1548, 1568
TasI	AATT	6 cut(s)	81, 309, 461, 836, 1052, 1061
TauI	GCSGC	5 cut(s)	30, 553, 979, 1009, 1012
TfiI	GAWTC	4 cut(s)	101, 770, 1258, 1294
TscAI	CASTG	3 cut(s)	856, 1205, 1496
TseI	GCWGC	4 cut(s)	337, 443, 1012, 1036
TspDTI	ATGAA	4 cut(s)	17, 239, 1271, 1520
TspGWI	ACGGA	2 cut(s)	46, 1139
TspRI	CASTG	3 cut(s)	856, 1205, 1496
Tth111I	GACNNNGTC	1 cut(s)	1397
Van91I	CCANNNNNTGG	1 cut(s)	84
VneI	GTGCAC	1 cut(s)	593
VpaK11BI	GGWCC	2 cut(s)	150, 1318
XapI	RAATTY	2 cut(s)	81, 836
XceI	RCATGY	1 cut(s)	1449
XmiI	GTMKAC	1 cut(s)	756
XmnI	GAANNNNTTC	1 cut(s)	1527

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.