Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0010801

Physical Location & Seq

Genomic Coordinates Reverse (-)

37839244 .. 37840937

Gene Structure 1694 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G027060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1653 bp

ATGAAGCGAAATCACCAAGTCAGTTGCGGCGGAGGTCAAAATGGTAGCAATACGTCCGTCTCTAATAGTAGCAAGGCCAAAATTTGGGAGGAGGAGCAAGAATCTGGAAGCATGGATGAGTTATTGGCCGTTTTGGGCTATAAAGTCAGGTCCGATGACATGGCCGATGTGGCCGAGAAGCTTGAACAGCTTGAGATGGTCATGGGTTCAGCTCAACAAGATGGGATTTCACAGCTTTCCGATACAGTTCATTACAACCCATCCGATCTCTCCGGCTGGCTCCAGACCATGCTCTCTGAACTCAACCCAATTGACGACGTCTTGTCAAACTCTCAGCAGCAGAAACAGAAGCAGAAGCAGAAGCAGATTGAGACCCAACCTCGGGTCATTTACGATGACAACTCCGAGTACGATCTCAGAGCCATTCCTGGTATTGCAGCCTACCCACAATCCCAATTGCAAACCGCGACTGAAATCAATAGCAAACGGTTGAAAACCTCAACTGGTTCGGCATCATCATCTTCTTCTTCGATTGAGCCTCGGCCACTCGTTGTGGTTGATGCACAGGATACAGGGGTGAGATTGGTGCACACACTCCTGGCCTGTGCCGAGGCTGTTCAGCAAGACAACTTGAAGGTGGCCGACGCGCTCGTCAAGCAAGTAGGCACACTCGCCGTCTCCCAGACCGGCGCTATGAGAAAGGTCGCCACTTACTTTGCAGAAGCCCTTGCTCGACGTATTTACAGAGTCTATCCTCAAGAGGATTCTCTCGTTTCTTCCTACTCGGATATTCTTCAGATGCACTTCTACGAGACCTGCCCTTACCTCAAATTTGCCCACTTCACTGCCAATCAAGCTATTCTCGAAGCATTCGCCACCGCAACCAGAGTACACGTCGTCGATTTCGGGCTGAAGCAAGGGATGCAATGGCCGGCTCTGATGCAAGCGCTCGCATTGAGGCCTGGTGGGCCGCCTGTGTTTCGGCTTACGGGTGTTGGGCCGCCGCAGCCGGACAACACAGACGCCCTGCAGCAAGTGGGTTGGAAATTGGCCCAATTCGCGGAGACCATGGGCGTCGAGTTCAAGTTCGAGTTTCGAGGTTTTGTCGCAAACAGTTTGGCTGATCTGGAGCCGTCAATGCTCGACGTCCGTCCGCCGGAAGTAGAGGCCTTGGCGGTCAACTCTGAGAAAGTCATGGCTTCAATCAAAGCCATGAATCCCAAGATTGTTACGATGGTGGAGCAGGAGGCGAATCATAACGGCCCGGTTTTTCTGGACCGGTTCAACGAGGCATTGCACTATTACTCCAGCTTGTTTGACTCGTTGGAGGGTTCGTCTGGGCCGAGTGAAGACCTGGTCATGTCGGAGGTGTACCTGGGAAGGCAGATATGCAACGTGGTGGCATGTGATGGTGGGGACAGAGTGGAGCGCCATGAGACCCTGACGCAGTGGCGGAACCGGTTGACCCGAGCCGGGTTCGAACCGGTTCATCTGGGATCCAACGTGTTCAAGCAGGCGCAGACGTTGCTGGCGCTTTACGCCGGCGGAGGTGGGTATCAGGTGGAGGAGAACAATGGGTCTCTCACGCTTGGGTGGCACACACGGCCTCTCATCGCCACCTCGGCTTGGCAACTGGCGAGTCCGACTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0006972 GO:0007154 GO:0007165 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009751 GO:0009753 GO:0009755 GO:0009863 GO:0009867 GO:0009889 GO:0009937 GO:0009938 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010033 GO:0010187 GO:0010468 GO:0010556 GO:0010646 GO:0010648 GO:0014070 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031326 GO:0032870 GO:0033993 GO:0035690 GO:0042221 GO:0042493 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0046677 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0080050 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1900140 GO:1901363 GO:1901700 GO:1901701 GO:1903506 GO:2000026 GO:2000033 GO:2000034 GO:2000112 GO:2000241 GO:2000377 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DELLA GRAS

Protein Analysis

550

Amino Acids

60.48

Weight (kDa)

5.13

Isoelectric Point (pI)

48.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DELLA	PF12041	39 - 104	1.8e-33	Transcriptional regulator DELLA protein N terminal
GRAS	PF03514	195 - 544	1.1e-124	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010801)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66350 AT3G03450 AT5G17490
malus_domestica	MD09G1264800.v1.1 MD17G1260700.v1.1
prunus_persica	Prupe.3G162500_v2.0.a1
pyrus_communis	pycom09g17840 pycom17g26140
rosa_chinensis	RchiOBHm_Chr3g0493011
rosa_laevigata	RLG00000022733
rosa_multiflora	Rmu_co8350645.1_g000001 Rmu_co8421333.1_g000001 Rmu_sc0003941.1_g000002
rosa_roxburghii	Rroxscaffold_6G00391950
rosa_rugosa	Rorug03G0258700
rosa_samantha	Rh3AG307700 Rh3BG343100 Rh3CG340500 Rh3DG342800
rosa_wichuraiana	Rw3G027060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	650
AatII	GACGTC	2 cut(s)	321, 1149
Acc36I	ACCTGC	1 cut(s)	824
AccB7I	CCANNNNNTGG	1 cut(s)	84
AccII	CGCG	3 cut(s)	467, 647, 1061
AclWI	GGATC	2 cut(s)	1491, 1504
AcoI	YGGCCR	6 cut(s)	126, 162, 171, 542, 639, 929
AcsI	RAATTY	2 cut(s)	81, 830
AcuI	CTGAAG	2 cut(s)	779, 932
AcyI	GRCGYC	4 cut(s)	318, 1023, 1074, 1146
AfaI	GTAC	3 cut(s)	410, 891, 1373
AfeI	AGCGCT	1 cut(s)	948
AfiI	CCNNNNNNNGG	7 cut(s)	84, 381, 382, 1060, 1156, 1473, 1626
AflIII	ACRYGT	2 cut(s)	892, 1503
AgeI	ACCGGT	3 cut(s)	1278, 1458, 1483
AgsI	TTSAA	7 cut(s)	185, 493, 634, 1084, 1203, 1285, 1510
AhdI	GACNNNNNGTC	1 cut(s)	322
AjiI	CACGTC	1 cut(s)	895
AjnI	CCWGG	5 cut(s)	427, 597, 961, 1353, 1374
AluBI	AGCT	6 cut(s)	181, 190, 212, 235, 857, 1311
AluI	AGCT	6 cut(s)	181, 190, 212, 235, 857, 1311
Alw21I	GWGCWC	1 cut(s)	591
Alw26I	GTCTC	7 cut(s)	64, 365, 682, 806, 1058, 1430, 1584
Alw44I	GTGCAC	1 cut(s)	587
AlwI	GGATC	2 cut(s)	1491, 1504
Ama87I	CYCGRG	2 cut(s)	381, 1467
Aor51HI	AGCGCT	1 cut(s)	948
ApaLI	GTGCAC	1 cut(s)	587
ApeKI	GCWGC	4 cut(s)	337, 437, 1006, 1030
ApoI	RAATTY	2 cut(s)	81, 830
AsiGI	ACCGGT	3 cut(s)	1278, 1458, 1483
Asp700I	GAANNNNTTC	1 cut(s)	1485
AspLEI	GCGC	6 cut(s)	649, 692, 949, 1431, 1519, 1534
AspS9I	GGNCC	7 cut(s)	150, 968, 998, 1051, 1262, 1276, 1340
AsuC2I	CCSGG	2 cut(s)	1265, 1474
AsuHPI	GGTGA	2 cut(s)	5, 589
AsuII	TTCGAA	1 cut(s)	1479
AvaI	CYCGRG	2 cut(s)	381, 1467
AvaII	GGWCC	2 cut(s)	150, 1276
BaeGI	GKGCMC	1 cut(s)	591
BaeI	ACNNNNGTAYC	2 cut(s)	561, 594
BamHI	GGATCC	1 cut(s)	1496
BbsI	GAAGAC	1 cut(s)	1356
Bbv12I	GWGCWC	1 cut(s)	591
BbvI	GCAGC	4 cut(s)	349, 449, 1018, 1042
BccI	CCATC	5 cut(s)	190, 215, 268, 1228, 1403
BceAI	ACGGC	5 cut(s)	113, 659, 1117, 1276, 1619
BciT130I	CCWGG	5 cut(s)	429, 599, 963, 1355, 1376
BciVI	GTATCC	1 cut(s)	562
BcnI	CCSGG	2 cut(s)	1265, 1474
BcoDI	GTCTC	7 cut(s)	64, 365, 682, 806, 1058, 1430, 1584
BfmI	CTRYAG	1 cut(s)	1028
BfoI	RGCGCY	4 cut(s)	693, 950, 1432, 1535
BfuAI	ACCTGC	1 cut(s)	824
BfuI	GTATCC	1 cut(s)	562
BglI	GCCNNNNNGGC	3 cut(s)	170, 967, 1622
BisI	GCNGC	8 cut(s)	28, 338, 438, 971, 1001, 1004, 1007, 1031
BlsI	GCNGC	8 cut(s)	29, 339, 439, 972, 1002, 1005, 1008, 1032
Bme1390I	CCNGG	7 cut(s)	429, 599, 963, 1265, 1355, 1376, 1474
Bme18I	GGWCC	2 cut(s)	150, 1276
BmeRI	GACNNNNNGTC	1 cut(s)	322
BmeT110I	CYCGRG	2 cut(s)	381, 1467
BmgBI	CACGTC	1 cut(s)	895
BmgT120I	GGNCC	7 cut(s)	150, 968, 998, 1051, 1262, 1276, 1340
BmiI	GGNNCC	4 cut(s)	281, 1131, 1457, 1498
BmrFI	CCNGG	7 cut(s)	429, 599, 963, 1265, 1355, 1376, 1474
BmsI	GCATC	5 cut(s)	521, 550, 789, 912, 930
BoxI	GACNNNNGTC	1 cut(s)	1149
BpiI	GAAGAC	1 cut(s)	1356
BplI	GAGNNNNNCTC	1 cut(s)	1630
BpmI	CTGGAG	3 cut(s)	266, 1148, 1291
Bpu14I	TTCGAA	1 cut(s)	1479
BpuEI	CTTGAG	2 cut(s)	212, 741
BpuMI	CCSGG	2 cut(s)	1265, 1474
BsaHI	GRCGYC	4 cut(s)	318, 1023, 1074, 1146
BsaI	GGTCTC	5 cut(s)	365, 806, 1058, 1430, 1584
BsaJI	CCNNGG	7 cut(s)	380, 539, 609, 1068, 1170, 1375, 1620
BsaWI	WCCGGW	3 cut(s)	1278, 1458, 1483
BsaXI	ACNNNNNCTCC	4 cut(s)	1289, 1319, 1319, 1349
Bsc4I	CCNNNNNNNGG	7 cut(s)	84, 381, 382, 1060, 1156, 1473, 1626
Bse118I	RCCGGY	6 cut(s)	686, 931, 1278, 1458, 1483, 1541
Bse1I	ACTGG	2 cut(s)	508, 1638
Bse3DI	GCAATG	2 cut(s)	932, 1292
BseBI	CCWGG	5 cut(s)	429, 599, 963, 1355, 1376
BseDI	CCNNGG	7 cut(s)	380, 539, 609, 1068, 1170, 1375, 1620
BseGI	GGATG	3 cut(s)	121, 260, 927
BseLI	CCNNNNNNNGG	7 cut(s)	84, 381, 382, 1060, 1156, 1473, 1626
BseMI	GCAATG	2 cut(s)	932, 1292
BseMII	CTCAG	3 cut(s)	347, 430, 1176
BseNI	ACTGG	2 cut(s)	508, 1638
BseRI	GAGGAG	3 cut(s)	104, 107, 1580
BseSI	GKGCMC	1 cut(s)	591
BseXI	GCAGC	4 cut(s)	349, 449, 1018, 1042
Bsh1236I	CGCG	3 cut(s)	467, 647, 1061
BshTI	ACCGGT	3 cut(s)	1278, 1458, 1483
BsiHKAI	GWGCWC	1 cut(s)	591
BsiHKCI	CYCGRG	2 cut(s)	381, 1467
BslFI	GGGAC	1 cut(s)	1430
BslI	CCNNNNNNNGG	7 cut(s)	84, 381, 382, 1060, 1156, 1473, 1626
BsmAI	GTCTC	7 cut(s)	64, 365, 682, 806, 1058, 1430, 1584
BsmBI	CGTCTC	2 cut(s)	64, 682
BsmFI	GGGAC	1 cut(s)	1430
BsmI	GAATGC	1 cut(s)	869
Bso31I	GGTCTC	5 cut(s)	365, 806, 1058, 1430, 1584
BsoBI	CYCGRG	2 cut(s)	381, 1467
Bsp119I	TTCGAA	1 cut(s)	1479
Bsp1286I	GDGCHC	1 cut(s)	591
Bsp143I	GATC	4 cut(s)	265, 412, 1123, 1496
Bsp19I	CCATGG	1 cut(s)	1068
BspCNI	CTCAG	3 cut(s)	346, 429, 1177
BspFNI	CGCG	3 cut(s)	467, 647, 1061
BspLI	GGNNCC	4 cut(s)	281, 1131, 1457, 1498
BspMAI	CTGCAG	1 cut(s)	1032
BspMI	ACCTGC	1 cut(s)	824
BspPI	GGATC	2 cut(s)	1491, 1504
BspT104I	TTCGAA	1 cut(s)	1479
BspTNI	GGTCTC	5 cut(s)	365, 806, 1058, 1430, 1584
BsrDI	GCAATG	2 cut(s)	932, 1292
BsrFI	RCCGGY	6 cut(s)	686, 931, 1278, 1458, 1483, 1541
BsrI	ACTGG	2 cut(s)	508, 1638
BssAI	RCCGGY	6 cut(s)	686, 931, 1278, 1458, 1483, 1541
BssECI	CCNNGG	7 cut(s)	380, 539, 609, 1068, 1170, 1375, 1620
BssMI	GATC	4 cut(s)	265, 412, 1123, 1496
BssNI	GRCGYC	4 cut(s)	318, 1023, 1074, 1146
BssT1I	CCWWGG	2 cut(s)	1068, 1170
Bst2UI	CCWGG	5 cut(s)	429, 599, 963, 1355, 1376
Bst4CI	ACNGT	3 cut(s)	247, 489, 1115
BstACI	GRCGYC	4 cut(s)	318, 1023, 1074, 1146
BstAPI	GCANNNNNTGC	2 cut(s)	922, 1525
BstBI	TTCGAA	1 cut(s)	1479
BstC8I	GCNNGC	7 cut(s)	278, 933, 945, 951, 1515, 1530, 1543
BstDEI	CTNAG	4 cut(s)	333, 416, 1185, 1647
BstDSI	CCRYGG	1 cut(s)	1068
BstF5I	GGATG	3 cut(s)	121, 260, 927
BstFNI	CGCG	3 cut(s)	467, 647, 1061
BstH2I	RGCGCY	4 cut(s)	693, 950, 1432, 1535
BstHHI	GCGC	6 cut(s)	649, 692, 949, 1431, 1519, 1534
BstKTI	GATC	4 cut(s)	268, 415, 1126, 1499
BstMAI	GTCTC	7 cut(s)	64, 365, 682, 806, 1058, 1430, 1584
BstMBI	GATC	4 cut(s)	265, 412, 1123, 1496
BstNI	CCWGG	5 cut(s)	429, 599, 963, 1355, 1376
BstNSI	RCATGY	1 cut(s)	1407
BstPAI	GACNNNNGTC	1 cut(s)	1149
BstSCI	CCNGG	7 cut(s)	427, 597, 961, 1263, 1353, 1374, 1472
BstSFI	CTRYAG	1 cut(s)	1028
BstSLI	GKGCMC	1 cut(s)	591
BstUI	CGCG	3 cut(s)	467, 647, 1061
BstV1I	GCAGC	4 cut(s)	349, 449, 1018, 1042
BstV2I	GAAGAC	1 cut(s)	1356
BstX2I	RGATCY	1 cut(s)	1496
BstYI	RGATCY	1 cut(s)	1496
BsuI	GTATCC	1 cut(s)	562
BtgI	CCRYGG	1 cut(s)	1068
BtgZI	GCGATG	1 cut(s)	1597
BtrI	CACGTC	1 cut(s)	895
BtsCI	GGATG	3 cut(s)	121, 260, 927
BtsI	GCAGTG	2 cut(s)	843, 1454
BtsIMutI	CAGTG	2 cut(s)	843, 1454
BveI	ACCTGC	1 cut(s)	824
Cac8I	GCNNGC	7 cut(s)	278, 933, 945, 951, 1515, 1530, 1543
CfoI	GCGC	6 cut(s)	649, 692, 949, 1431, 1519, 1534
Cfr10I	RCCGGY	6 cut(s)	686, 931, 1278, 1458, 1483, 1541
Cfr13I	GGNCC	7 cut(s)	150, 968, 998, 1051, 1262, 1276, 1340
CseI	GACGC	4 cut(s)	653, 1031, 1063, 1453
CsiI	ACCWGGT	1 cut(s)	1353
Csp6I	GTAC	3 cut(s)	409, 890, 1372
CspAI	ACCGGT	3 cut(s)	1278, 1458, 1483
CspCI	CAANNNNNGTGG	2 cut(s)	697, 732
CviQI	GTAC	3 cut(s)	409, 890, 1372
DdeI	CTNAG	4 cut(s)	333, 416, 1185, 1647
DpnI	GATC	4 cut(s)	267, 414, 1125, 1498
DpnII	GATC	4 cut(s)	265, 412, 1123, 1496
DrdI	GACNNNNNNGTC	1 cut(s)	650
DriI	GACNNNNNGTC	1 cut(s)	322
DseDI	GACNNNNNNGTC	1 cut(s)	650
EaeI	YGGCCR	6 cut(s)	126, 162, 171, 542, 639, 929
Eam1105I	GACNNNNNGTC	1 cut(s)	322
EciI	GGCGGA	4 cut(s)	45, 1143, 1468, 1560
Eco130I	CCWWGG	2 cut(s)	1068, 1170
Eco147I	AGGCCT	2 cut(s)	961, 1169
Eco31I	GGTCTC	5 cut(s)	365, 806, 1058, 1430, 1584
Eco47I	GGWCC	2 cut(s)	150, 1276
Eco47III	AGCGCT	1 cut(s)	948
Eco57I	CTGAAG	2 cut(s)	779, 932
Eco88I	CYCGRG	2 cut(s)	381, 1467
EcoRII	CCWGG	5 cut(s)	427, 597, 961, 1353, 1374
EcoT14I	CCWWGG	2 cut(s)	1068, 1170
ErhI	CCWWGG	2 cut(s)	1068, 1170
Esp3I	CGTCTC	2 cut(s)	64, 682
FaqI	GGGAC	1 cut(s)	1430
Fnu4HI	GCNGC	8 cut(s)	28, 338, 438, 971, 1001, 1004, 1007, 1031
FokI	GGATG	3 cut(s)	128, 247, 934
Fsp4HI	GCNGC	8 cut(s)	28, 338, 438, 971, 1001, 1004, 1007, 1031
GlaI	GCGC	6 cut(s)	648, 691, 948, 1430, 1518, 1533
GluI	GCNGC	8 cut(s)	28, 338, 438, 971, 1001, 1004, 1007, 1031
GsuI	CTGGAG	3 cut(s)	266, 1148, 1291
HaeII	RGCGCY	4 cut(s)	693, 950, 1432, 1535
HgaI	GACGC	4 cut(s)	653, 1031, 1063, 1453
HhaI	GCGC	6 cut(s)	649, 692, 949, 1431, 1519, 1534
Hin1I	GRCGYC	4 cut(s)	318, 1023, 1074, 1146
Hin6I	GCGC	6 cut(s)	647, 690, 947, 1429, 1517, 1532
HinP1I	GCGC	6 cut(s)	647, 690, 947, 1429, 1517, 1532
HincII	GTYRAC	2 cut(s)	1180, 1464
HindII	GTYRAC	2 cut(s)	1180, 1464
HindIII	AAGCTT	1 cut(s)	179
HinfI	GANTC	8 cut(s)	101, 747, 764, 1216, 1252, 1319, 1639, 1645
HphI	GGTGA	2 cut(s)	5, 589
Hpy166II	GTNNAC	5 cut(s)	589, 892, 1180, 1372, 1464
Hpy188III	TCNNGA	6 cut(s)	105, 283, 758, 863, 1127, 1274
Hpy8I	GTNNAC	5 cut(s)	589, 892, 1180, 1372, 1464
Hpy99I	CGWCG	7 cut(s)	320, 647, 738, 899, 902, 1079, 1148
HpyAV	CCTTC	2 cut(s)	628, 1374
HpyCH4III	ACNGT	3 cut(s)	247, 489, 1115
HpyCH4IV	ACGT	8 cut(s)	53, 318, 736, 894, 1146, 1395, 1503, 1523
HpyF3I	CTNAG	4 cut(s)	333, 416, 1185, 1647
HpySE526I	ACGT	8 cut(s)	53, 318, 736, 894, 1146, 1395, 1503, 1523
Hsp92I	GRCGYC	4 cut(s)	318, 1023, 1074, 1146
HspAI	GCGC	6 cut(s)	647, 690, 947, 1429, 1517, 1532
KroI	GCCGGC	2 cut(s)	931, 1541
KroNI	GCCGGC	2 cut(s)	933, 1543
Kzo9I	GATC	4 cut(s)	265, 412, 1123, 1496
LmnI	GCTCC	5 cut(s)	94, 285, 1129, 1240, 1426
Lsp1109I	GCAGC	4 cut(s)	349, 449, 1018, 1042
LweI	GCATC	5 cut(s)	521, 550, 789, 912, 930
MabI	ACCWGGT	1 cut(s)	1353
MaeII	ACGT	8 cut(s)	53, 318, 736, 894, 1146, 1395, 1503, 1523
MaeIII	GTNAC	1 cut(s)	1228
MalI	GATC	4 cut(s)	267, 414, 1125, 1498
MboI	GATC	4 cut(s)	265, 412, 1123, 1496
MboII	GAAGA	6 cut(s)	513, 516, 519, 768, 785, 1361
MfeI	CAATTG	2 cut(s)	309, 455
MflI	RGATCY	1 cut(s)	1496
MhlI	GDGCHC	1 cut(s)	591
MluCI	AATT	6 cut(s)	81, 309, 455, 830, 1046, 1055
MlyI	GAGTC	4 cut(s)	756, 1313, 1639, 1648
MmeI	TCCRAC	4 cut(s)	1022, 1305, 1344, 1524
MreI	CGCCGGCG	1 cut(s)	1541
MroNI	GCCGGC	2 cut(s)	931, 1541
MroXI	GAANNNNTTC	1 cut(s)	1485
MspR9I	CCNGG	7 cut(s)	429, 599, 963, 1265, 1355, 1376, 1474
MunI	CAATTG	2 cut(s)	309, 455
Mva1269I	GAATGC	1 cut(s)	869
MvaI	CCWGG	5 cut(s)	429, 599, 963, 1355, 1376
MvnI	CGCG	3 cut(s)	467, 647, 1061
NaeI	GCCGGC	2 cut(s)	933, 1543
NciI	CCSGG	2 cut(s)	1265, 1474
NcoI	CCATGG	1 cut(s)	1068
NdeII	GATC	4 cut(s)	265, 412, 1123, 1496
NgoMIV	GCCGGC	2 cut(s)	931, 1541
NlaIV	GGNNCC	4 cut(s)	281, 1131, 1457, 1498
NmeAIII	GCCGAG	5 cut(s)	199, 520, 634, 1368, 1601
NspI	RCATGY	1 cut(s)	1407
NspV	TTCGAA	1 cut(s)	1479
PceI	AGGCCT	2 cut(s)	961, 1169
PcsI	WCGNNNNNNNCGW	1 cut(s)	1340
PctI	GAATGC	1 cut(s)	869
PdiI	GCCGGC	2 cut(s)	933, 1543
PdmI	GAANNNNTTC	1 cut(s)	1485
PfeI	GAWTC	4 cut(s)	101, 764, 1216, 1252
PflFI	GACNNNGTC	2 cut(s)	317, 1355
PflMI	CCANNNNNTGG	1 cut(s)	84
PinAI	ACCGGT	3 cut(s)	1278, 1458, 1483
PkrI	GCNGC	8 cut(s)	29, 339, 439, 972, 1002, 1005, 1008, 1032
PleI	GAGTC	4 cut(s)	755, 1313, 1639, 1647
PpsI	GAGTC	4 cut(s)	755, 1313, 1639, 1647
PshAI	GACNNNNGTC	1 cut(s)	1149
Psp6I	CCWGG	5 cut(s)	427, 597, 961, 1353, 1374
PspGI	CCWGG	5 cut(s)	427, 597, 961, 1353, 1374
PspN4I	GGNNCC	4 cut(s)	281, 1131, 1457, 1498
PspPI	GGNCC	7 cut(s)	150, 968, 998, 1051, 1262, 1276, 1340
PstI	CTGCAG	1 cut(s)	1032
PsuI	RGATCY	1 cut(s)	1496
PsyI	GACNNNGTC	2 cut(s)	317, 1355
RsaI	GTAC	3 cut(s)	410, 891, 1373
RsaNI	GTAC	3 cut(s)	409, 890, 1372
SatI	GCNGC	8 cut(s)	28, 338, 438, 971, 1001, 1004, 1007, 1031
Sau3AI	GATC	4 cut(s)	265, 412, 1123, 1496
Sau96I	GGNCC	7 cut(s)	150, 968, 998, 1051, 1262, 1276, 1340
SchI	GAGTC	4 cut(s)	756, 1313, 1639, 1648
ScrFI	CCNGG	7 cut(s)	429, 599, 963, 1265, 1355, 1376, 1474
SduI	GDGCHC	1 cut(s)	591
SexAI	ACCWGGT	1 cut(s)	1353
SfaNI	GCATC	5 cut(s)	521, 550, 789, 912, 930
SfcI	CTRYAG	1 cut(s)	1028
SfiI	GGCCNNNNNGGCC	2 cut(s)	170, 967
SfuI	TTCGAA	1 cut(s)	1479
SgrAI	CRCCGGYG	1 cut(s)	1541
SinI	GGWCC	2 cut(s)	150, 1276
SmlI	CTYRAG	2 cut(s)	191, 756
SmoI	CTYRAG	2 cut(s)	191, 756
Sse9I	AATT	6 cut(s)	81, 309, 455, 830, 1046, 1055
SseBI	AGGCCT	2 cut(s)	961, 1169
StuI	AGGCCT	2 cut(s)	961, 1169
StyD4I	CCNGG	7 cut(s)	427, 597, 961, 1263, 1353, 1374, 1472
StyI	CCWWGG	2 cut(s)	1068, 1170
TaaI	ACNGT	3 cut(s)	247, 489, 1115
TaiI	ACGT	8 cut(s)	56, 321, 739, 897, 1149, 1398, 1506, 1526
TaqI	TCGA	9 cut(s)	530, 733, 864, 900, 1077, 1089, 1096, 1143, 1479
TasI	AATT	6 cut(s)	81, 309, 455, 830, 1046, 1055
TatI	WGTACW	1 cut(s)	889
TauI	GCSGC	4 cut(s)	30, 973, 1003, 1006
TfiI	GAWTC	4 cut(s)	101, 764, 1216, 1252
TscAI	CASTG	2 cut(s)	850, 1454
TseI	GCWGC	4 cut(s)	337, 437, 1006, 1030
TspDTI	ATGAA	4 cut(s)	17, 239, 1229, 1478
TspGWI	ACGGA	2 cut(s)	46, 1139
TspRI	CASTG	2 cut(s)	850, 1454
Tth111I	GACNNNGTC	2 cut(s)	317, 1355
Van91I	CCANNNNNTGG	1 cut(s)	84
VneI	GTGCAC	1 cut(s)	587
VpaK11BI	GGWCC	2 cut(s)	150, 1276
XapI	RAATTY	2 cut(s)	81, 830
XceI	RCATGY	1 cut(s)	1407
XmnI	GAANNNNTTC	1 cut(s)	1485
ZraI	GACGTC	2 cut(s)	319, 1147

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.