Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0010801

Physical Location & Seq

Genomic Coordinates Forward (+)

18359706 .. 18361745

Gene Structure 2040 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g17840.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGAAGAGAGAACACTGCCATAGCTCTGCAACTGCAAGTCAGAACAATTCCAAACCAGAATACTCATCACCGCCGTCTTCCGCCCTGAACGGCAAGGCCAAGATTTGGGTAGATGAACAAGGCTACAGCGGCAGCGGCGGTATGGACGAGCTGCTTGCCGTTTTGGGATACAAGGTTCGGACCGACGACATGGCCGACGTGGCCGAGAAGCTCGAGCAGCTCGAGATGGTCATGGGTTCGGCTCAGGAAGATGGGATTTCTCAGCTCTCTGACACCGTCCATTACAACCCGTCCGATCTCTCCGGGTGGGTCCAAAGCATGCTCTCTGAGCTCAACACCGGCGACGATATGCCCTCAATCAACGGCCCTCTTCTCGCTCCAGGGGAGTCCTCGACGATAACGTCCACGAAGTTCTGCAATTCCCAGCGGACTCGGGTTTTCAGCGACGATTCCGAATACGATCTCAGGGCTATTCCTGGCGTGGCGGCGTACCCGCCGGCACATTCGTCGTCGGAGACCGAGAGTACGAGAAAGCGATTGAAGACCTCAATTGGGTCTAATTCCGGCGGGATTGAAGTCTCCGGCGCTGTATCCGACCCGACTCGGCCTCTGGTCCTGGTCGACTCACAAGAAACCGGCGTCCAACTCGTCCACACACTCATGGCCTGTGCTGAGGCTGTCCAGCAGGAAAACTTAAAGCTTGCAGACGCGCTTGTGAAGCACGTGGGCCTACTCGCGGCTGCCCAAACCGGAGCTATGAGGAAAGTCGCCACGTACTTCGCTGAAGCTCTGGCTCGTCGGATTTACCGAATATACCCTCAGGATTGCCTCGATTCTTCCTACTCGGACATTCTCCAGATGCACTTTTACGAGACCTGCCCTTACCTGAAATTTGCCCACTTCACTGCCAACCAGGCAATACTCGAGGCTTTTGCCACGGCGACCAGAGTACACGTCATCGATTTCGGGCTTAAACAGGGGATGCAATGGCCAGCGCTCATGCAGGCGCTGGCACTAAGGCCCGGCGGCCCACCCGCGTTTCGCCTGACAGGTATTGGGCCGCCGCAGCCCGATAACACGGACGCGCTGCAGCAGGTGGGATGGAAGTTGGCTCAATTGGCAGAAACTATTGGGGTCGAGTTTGAATTTCGAGGATTCGTCGCCAGTAGTCTGGCTGACCTCGAGCCGTCTATGCTCGACATCCGTCAGGACGAGGCCGTAGCGGTGAATTCGGTTTTCGAGCTTCACGGCCTCTTGGCTCGAGCCGGGGCGGTGGACAAAGTGTTGTCATCAATCAAGGCCATGAAGCCTAAAATTGTGACTATTGTGGAGCAGGAGGCGAACCATAACGGGCCGGCTTTCTTGGACCGGTTCACGGAGGCATTGCATTATTATTCAAGCTTGTTTGACTCTCTGGAGGGATCGTCCGGGCCGAGTCAAGATTTGGTCATGTCGGAGGTCTATTTGGGTAGGCAGATATGCAACGTGGTGGCATGTGAAGGTGGGGACCGAGTTGAGCGACACGAGACGCTGACTCAGTGGCGAGGCCGGATGGACTCCGCCGGGTTCCACCCAGTCCACCTCGGATCGAACGCGTTCAAGCAGGCTAGCATGCTGCTTGCTCTTTTCGCCGGCGTAGATGGGTATCGGGTGGAGGAGAACAATGGGTCTCTCATGCTCGGGTGGCACACGCGGCCGCTCATAGTCACCTCGGCCTGGAAGCTGGCGAGCTCAACGGATGGTGTATACTGTGTAGTTGTAATTGTAATGGTAGTTTTTTTTAATTTTTTTTTAATTTTTTTTTATGGGCCCTTTTGCATAAGTTCAAGTTGTAGAGTCCTTTCGACAAGGGGGATGAATGAATCATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0006972 GO:0007154 GO:0007165 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009751 GO:0009753 GO:0009755 GO:0009863 GO:0009867 GO:0009889 GO:0009937 GO:0009938 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010033 GO:0010187 GO:0010468 GO:0010556 GO:0010646 GO:0010648 GO:0014070 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031326 GO:0032870 GO:0033993 GO:0035690 GO:0042221 GO:0042493 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0046677 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0080050 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1900140 GO:1901363 GO:1901700 GO:1901701 GO:1903506 GO:2000026 GO:2000033 GO:2000034 GO:2000112 GO:2000241 GO:2000377 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DELLA GRAS

Protein Analysis

624

Amino Acids

67.84

Weight (kDa)

5.22

Isoelectric Point (pI)

38.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010801)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66350 AT3G03450 AT5G17490
malus_domestica	MD09G1264800.v1.1 MD17G1260700.v1.1
prunus_persica	Prupe.3G162500_v2.0.a1
pyrus_communis	pycom09g17840 pycom17g26140
rosa_chinensis	RchiOBHm_Chr3g0493011
rosa_laevigata	RLG00000022733
rosa_multiflora	Rmu_co8350645.1_g000001 Rmu_co8421333.1_g000001 Rmu_sc0003941.1_g000002
rosa_roxburghii	Rroxscaffold_6G00391950
rosa_rugosa	Rorug03G0258700
rosa_samantha	Rh3AG307700 Rh3BG343100 Rh3CG340500 Rh3DG342800
rosa_wichuraiana	Rw3G027060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1084
AasI	GACNNNNNNGTC	1 cut(s)	400
Acc36I	ACCTGC	2 cut(s)	884, 1084
AccB7I	CCANNNNNTGG	1 cut(s)	105
AccBSI	CCGCTC	1 cut(s)	1699
AccI	GTMKAC	2 cut(s)	621, 1746
AccII	CGCG	6 cut(s)	710, 737, 1037, 1085, 1595, 1693
AclWI	GGATC	2 cut(s)	1429, 1594
AcoI	YGGCCR	4 cut(s)	192, 201, 989, 1694
AcsI	RAATTY	3 cut(s)	890, 1145, 1228
AcuI	CTGAAG	1 cut(s)	804
AcvI	CACGTG	1 cut(s)	724
AcyI	GRCGYC	1 cut(s)	639
AfaI	GTAC	4 cut(s)	491, 526, 776, 951
AfeI	AGCGCT	1 cut(s)	996
AfiI	CCNNNNNNNGG	5 cut(s)	105, 552, 736, 1375, 1716
AflIII	ACRYGT	2 cut(s)	952, 1593
AgeI	ACCGGT	1 cut(s)	1368
AgsI	TTSAA	6 cut(s)	541, 575, 1145, 1398, 1600, 1827
AjiI	CACGTC	2 cut(s)	199, 955
AjnI	CCWGG	5 cut(s)	379, 475, 615, 912, 1715
AloI	GAACNNNNNNTCC	2 cut(s)	159, 191
Alw21I	GWGCWC	2 cut(s)	333, 1733
Alw26I	GTCTC	5 cut(s)	509, 583, 866, 1520, 1674
AlwI	GGATC	2 cut(s)	1429, 1594
AlwNI	CAGNNNCTG	1 cut(s)	1009
Ama87I	CYCGRG	7 cut(s)	212, 221, 432, 923, 1181, 1260, 1679
Aor51HI	AGCGCT	1 cut(s)	996
ApaI	GGGCCC	1 cut(s)	1812
ApeKI	GCWGC	8 cut(s)	132, 151, 217, 740, 1066, 1087, 1090, 1615
ApoI	RAATTY	3 cut(s)	890, 1145, 1228
AsiGI	ACCGGT	1 cut(s)	1368
Asp700I	GAANNNNTTC	1 cut(s)	1595
AspLEI	GCGC	5 cut(s)	587, 712, 997, 1009, 1087
AsuC2I	CCSGG	5 cut(s)	304, 1023, 1267, 1429, 1564
AsuHPI	GGTGA	3 cut(s)	60, 1237, 1699
AsuNHI	GCTAGC	1 cut(s)	1607
AvaI	CYCGRG	7 cut(s)	212, 221, 432, 923, 1181, 1260, 1679
AvaII	GGWCC	5 cut(s)	180, 310, 613, 1366, 1507
AxyI	CCTNAGG	1 cut(s)	819
BaeGI	GKGCMC	1 cut(s)	1812
BalI	TGGCCA	1 cut(s)	991
BanII	GRGCYC	3 cut(s)	333, 1733, 1812
BauI	CACGAG	1 cut(s)	1523
BbrPI	CACGTG	1 cut(s)	724
BbsI	GAAGAC	2 cut(s)	69, 548
Bbv12I	GWGCWC	2 cut(s)	333, 1733
BbvCI	CCTCAGC	1 cut(s)	672
BbvI	GCAGC	8 cut(s)	138, 144, 229, 727, 1074, 1078, 1102, 1602
BccI	CCATC	6 cut(s)	220, 245, 1095, 1546, 1634, 1733
BceAI	ACGGC	8 cut(s)	58, 106, 143, 379, 954, 1171, 1202, 1264
BcgI	CGANNNNNNTGC	6 cut(s)	137, 171, 489, 523, 914, 948
BciT130I	CCWGG	5 cut(s)	381, 477, 617, 914, 1717
BciVI	GTATCC	2 cut(s)	161, 601
BcnI	CCSGG	5 cut(s)	304, 1023, 1267, 1429, 1564
BcoDI	GTCTC	5 cut(s)	509, 583, 866, 1520, 1674
BfaI	CTAG	1 cut(s)	1608
BfmI	CTRYAG	2 cut(s)	124, 1088
BfoI	RGCGCY	3 cut(s)	588, 998, 1010
BfuAI	ACCTGC	2 cut(s)	884, 1084
BfuI	GTATCC	2 cut(s)	161, 601
BglI	GCCNNNNNGGC	2 cut(s)	200, 914
Bme18I	GGWCC	5 cut(s)	180, 310, 613, 1366, 1507
BmeT110I	CYCGRG	7 cut(s)	212, 221, 432, 923, 1181, 1260, 1679
BmgBI	CACGTC	2 cut(s)	199, 955
BmiI	GGNNCC	4 cut(s)	311, 1508, 1568, 1810
BmrI	ACTGGG	1 cut(s)	1568
BmsI	GCATC	2 cut(s)	849, 972
BmtI	GCTAGC	1 cut(s)	1611
BmuI	ACTGGG	1 cut(s)	1568
BoxI	GACNNNNGTC	1 cut(s)	1203
BpiI	GAAGAC	2 cut(s)	69, 548
BpmI	CTGGAG	3 cut(s)	363, 839, 1436
Bpu10I	CCTNAGC	2 cut(s)	243, 672
BpuMI	CCSGG	5 cut(s)	304, 1023, 1267, 1429, 1564
Bsa29I	ATCGAT	1 cut(s)	960
BsaAI	YACGTR	2 cut(s)	724, 774
BsaBI	GATNNNNATC	1 cut(s)	1644
BsaHI	GRCGYC	1 cut(s)	639
BsaI	GGTCTC	3 cut(s)	509, 866, 1674
BsaJI	CCNNGG	5 cut(s)	380, 936, 1266, 1582, 1710
BsaWI	WCCGGW	2 cut(s)	749, 1368
BsaXI	ACNNNNNCTCC	2 cut(s)	1409, 1439
Bsc4I	CCNNNNNNNGG	5 cut(s)	105, 552, 736, 1375, 1716
Bse118I	RCCGGY	6 cut(s)	338, 496, 635, 1354, 1368, 1631
Bse1I	ACTGG	2 cut(s)	1164, 1574
Bse21I	CCTNAGG	1 cut(s)	819
Bse3DI	GCAATG	2 cut(s)	992, 1382
Bse8I	GATNNNNATC	1 cut(s)	1644
BseBI	CCWGG	5 cut(s)	381, 477, 617, 914, 1717
BseCI	ATCGAT	1 cut(s)	960
BseDI	CCNNGG	5 cut(s)	380, 936, 1266, 1582, 1710
BseGI	GGATG	6 cut(s)	987, 1106, 1200, 1557, 1744, 1860
BseJI	GATNNNNATC	1 cut(s)	1644
BseLI	CCNNNNNNNGG	5 cut(s)	105, 552, 736, 1375, 1716
BseMI	GCAATG	2 cut(s)	992, 1382
BseMII	CTCAG	7 cut(s)	257, 275, 318, 478, 663, 833, 1550
BseNI	ACTGG	2 cut(s)	1164, 1574
BseRI	GAGGAG	1 cut(s)	1670
BseSI	GKGCMC	1 cut(s)	1812
BseX3I	CGGCCG	1 cut(s)	1694
BseXI	GCAGC	8 cut(s)	138, 144, 229, 727, 1074, 1078, 1102, 1602
BseYI	CCCAGC	1 cut(s)	423
Bsh1236I	CGCG	6 cut(s)	710, 737, 1037, 1085, 1595, 1693
Bsh1285I	CGRYCG	1 cut(s)	1697
BshTI	ACCGGT	1 cut(s)	1368
BshVI	ATCGAT	1 cut(s)	960
BsiEI	CGRYCG	1 cut(s)	1697
BsiHKAI	GWGCWC	2 cut(s)	333, 1733
BsiHKCI	CYCGRG	7 cut(s)	212, 221, 432, 923, 1181, 1260, 1679
BslFI	GGGAC	1 cut(s)	1520
BslI	CCNNNNNNNGG	5 cut(s)	105, 552, 736, 1375, 1716
BsmAI	GTCTC	5 cut(s)	509, 583, 866, 1520, 1674
BsmBI	CGTCTC	1 cut(s)	1520
BsmFI	GGGAC	1 cut(s)	1520
Bso31I	GGTCTC	3 cut(s)	509, 866, 1674
BsoBI	CYCGRG	7 cut(s)	212, 221, 432, 923, 1181, 1260, 1679
Bsp120I	GGGCCC	1 cut(s)	1808
Bsp1286I	GDGCHC	3 cut(s)	333, 1733, 1812
Bsp143I	GATC	4 cut(s)	295, 460, 1421, 1586
BspCNI	CTCAG	7 cut(s)	256, 274, 319, 477, 664, 832, 1549
BspDI	ATCGAT	1 cut(s)	960
BspFNI	CGCG	6 cut(s)	710, 737, 1037, 1085, 1595, 1693
BspLI	GGNNCC	4 cut(s)	311, 1508, 1568, 1810
BspMAI	CTGCAG	1 cut(s)	1092
BspMI	ACCTGC	2 cut(s)	884, 1084
BspOI	GCTAGC	1 cut(s)	1611
BspPI	GGATC	2 cut(s)	1429, 1594
BspTNI	GGTCTC	3 cut(s)	509, 866, 1674
BsrBI	CCGCTC	1 cut(s)	1699
BsrDI	GCAATG	2 cut(s)	992, 1382
BsrFI	RCCGGY	6 cut(s)	338, 496, 635, 1354, 1368, 1631
BsrI	ACTGG	2 cut(s)	1164, 1574
BssAI	RCCGGY	6 cut(s)	338, 496, 635, 1354, 1368, 1631
BssECI	CCNNGG	5 cut(s)	380, 936, 1266, 1582, 1710
BssMI	GATC	4 cut(s)	295, 460, 1421, 1586
BssNAI	GTATAC	1 cut(s)	1747
BssNI	GRCGYC	1 cut(s)	639
BssSI	CACGAG	1 cut(s)	1523
Bst1107I	GTATAC	1 cut(s)	1747
Bst2BI	CACGAG	1 cut(s)	1523
Bst2UI	CCWGG	5 cut(s)	381, 477, 617, 914, 1717
Bst4CI	ACNGT	2 cut(s)	277, 1751
Bst6I	CTCTTC	1 cut(s)	375
BstACI	GRCGYC	1 cut(s)	639
BstBAI	YACGTR	2 cut(s)	724, 774
BstDEI	CTNAG	8 cut(s)	243, 261, 327, 464, 672, 819, 1016, 1536
BstDSI	CCRYGG	1 cut(s)	936
BstF5I	GGATG	6 cut(s)	987, 1106, 1200, 1557, 1744, 1860
BstFNI	CGCG	6 cut(s)	710, 737, 1037, 1085, 1595, 1693
BstH2I	RGCGCY	3 cut(s)	588, 998, 1010
BstHHI	GCGC	5 cut(s)	587, 712, 997, 1009, 1087
BstKTI	GATC	4 cut(s)	298, 463, 1424, 1589
BstMAI	GTCTC	5 cut(s)	509, 583, 866, 1520, 1674
BstMBI	GATC	4 cut(s)	295, 460, 1421, 1586
BstMCI	CGRYCG	1 cut(s)	1697
BstNI	CCWGG	5 cut(s)	381, 477, 617, 914, 1717
BstNSI	RCATGY	3 cut(s)	322, 1497, 1615
BstPAI	GACNNNNGTC	1 cut(s)	1203
BstSFI	CTRYAG	2 cut(s)	124, 1088
BstSLI	GKGCMC	1 cut(s)	1812
BstUI	CGCG	6 cut(s)	710, 737, 1037, 1085, 1595, 1693
BstV1I	GCAGC	8 cut(s)	138, 144, 229, 727, 1074, 1078, 1102, 1602
BstV2I	GAAGAC	2 cut(s)	69, 548
BstXI	CCANNNNNNTGG	1 cut(s)	1171
BstZ17I	GTATAC	1 cut(s)	1747
BstZI	CGGCCG	1 cut(s)	1694
Bsu15I	ATCGAT	1 cut(s)	960
Bsu36I	CCTNAGG	1 cut(s)	819
BsuI	GTATCC	2 cut(s)	161, 601
BsuTUI	ATCGAT	1 cut(s)	960
BtgI	CCRYGG	1 cut(s)	936
BtrI	CACGTC	2 cut(s)	199, 955
BtsCI	GGATG	6 cut(s)	987, 1106, 1200, 1557, 1744, 1860
BtsI	GCAGTG	2 cut(s)	13, 903
BtsIMutI	CAGTG	3 cut(s)	13, 903, 1544
BveI	ACCTGC	2 cut(s)	884, 1084
CaiI	CAGNNNCTG	1 cut(s)	1009
CciNI	GCGGCCGC	1 cut(s)	1694
CfoI	GCGC	5 cut(s)	587, 712, 997, 1009, 1087
Cfr10I	RCCGGY	6 cut(s)	338, 496, 635, 1354, 1368, 1631
ClaI	ATCGAT	1 cut(s)	960
CpoI	CGGWCCG	1 cut(s)	180
CseI	GACGC	4 cut(s)	628, 716, 1091, 1537
Csp6I	GTAC	4 cut(s)	490, 525, 775, 950
CspAI	ACCGGT	1 cut(s)	1368
CspI	CGGWCCG	1 cut(s)	180
CviQI	GTAC	4 cut(s)	490, 525, 775, 950
DdeI	CTNAG	8 cut(s)	243, 261, 327, 464, 672, 819, 1016, 1536
DpnI	GATC	4 cut(s)	297, 462, 1423, 1588
DpnII	GATC	4 cut(s)	295, 460, 1421, 1586
DrdI	GACNNNNNNGTC	1 cut(s)	400
DseDI	GACNNNNNNGTC	1 cut(s)	400
EaeI	YGGCCR	4 cut(s)	192, 201, 989, 1694
EagI	CGGCCG	1 cut(s)	1694
Eam1104I	CTCTTC	1 cut(s)	375
EarI	CTCTTC	1 cut(s)	375
EciI	GGCGGA	2 cut(s)	70, 1549
Ecl136II	GAGCTC	2 cut(s)	331, 1731
EclXI	CGGCCG	1 cut(s)	1694
Eco24I	GRGCYC	3 cut(s)	333, 1733, 1812
Eco31I	GGTCTC	3 cut(s)	509, 866, 1674
Eco47I	GGWCC	5 cut(s)	180, 310, 613, 1366, 1507
Eco47III	AGCGCT	1 cut(s)	996
Eco52I	CGGCCG	1 cut(s)	1694
Eco53kI	GAGCTC	2 cut(s)	331, 1731
Eco57I	CTGAAG	1 cut(s)	804
Eco72I	CACGTG	1 cut(s)	724
Eco81I	CCTNAGG	1 cut(s)	819
Eco88I	CYCGRG	7 cut(s)	212, 221, 432, 923, 1181, 1260, 1679
EcoICRI	GAGCTC	2 cut(s)	331, 1731
EcoO109I	RGGNCCY	1 cut(s)	1809
EcoRI	GAATTC	1 cut(s)	1228
EcoRII	CCWGG	5 cut(s)	379, 475, 615, 912, 1715
EcoT38I	GRGCYC	3 cut(s)	333, 1733, 1812
Esp3I	CGTCTC	1 cut(s)	1520
FaqI	GGGAC	1 cut(s)	1520
FauI	CCCGC	3 cut(s)	501, 560, 1042
FblI	GTMKAC	2 cut(s)	621, 1746
FokI	GGATG	6 cut(s)	994, 1113, 1187, 1564, 1751, 1867
FriOI	GRGCYC	3 cut(s)	333, 1733, 1812
FspBI	CTAG	1 cut(s)	1608
GlaI	GCGC	5 cut(s)	586, 711, 996, 1008, 1086
GsaI	CCCAGC	1 cut(s)	427
GsuI	CTGGAG	3 cut(s)	363, 839, 1436
HaeII	RGCGCY	3 cut(s)	588, 998, 1010
HgaI	GACGC	4 cut(s)	628, 716, 1091, 1537
HhaI	GCGC	5 cut(s)	587, 712, 997, 1009, 1087
Hin1I	GRCGYC	1 cut(s)	639
Hin6I	GCGC	5 cut(s)	585, 710, 995, 1007, 1085
HinP1I	GCGC	5 cut(s)	585, 710, 995, 1007, 1085
HincII	GTYRAC	1 cut(s)	622
HindII	GTYRAC	1 cut(s)	622
HindIII	AAGCTT	2 cut(s)	698, 1399
HphI	GGTGA	3 cut(s)	60, 1237, 1699
Hpy166II	GTNNAC	8 cut(s)	405, 622, 652, 952, 1276, 1374, 1579, 1747
Hpy188III	TCNNGA	7 cut(s)	223, 245, 821, 856, 1208, 1415, 1439
Hpy8I	GTNNAC	8 cut(s)	405, 622, 652, 952, 1276, 1374, 1579, 1747
Hpy99I	CGWCG	9 cut(s)	188, 200, 347, 397, 449, 511, 514, 801, 1163
HpyAV	CCTTC	1 cut(s)	1493
HpyCH4III	ACNGT	2 cut(s)	277, 1751
HpyCH4IV	ACGT	6 cut(s)	198, 401, 723, 773, 954, 1485
HpyF3I	CTNAG	8 cut(s)	243, 261, 327, 464, 672, 819, 1016, 1536
HpySE526I	ACGT	6 cut(s)	198, 401, 723, 773, 954, 1485
Hsp92I	GRCGYC	1 cut(s)	639
HspAI	GCGC	5 cut(s)	585, 710, 995, 1007, 1085
KroI	GCCGGC	3 cut(s)	496, 1354, 1631
KroNI	GCCGGC	3 cut(s)	498, 1356, 1633
Kzo9I	GATC	4 cut(s)	295, 460, 1421, 1586
LmnI	GCTCC	3 cut(s)	382, 752, 1330
Lsp1109I	GCAGC	8 cut(s)	138, 144, 229, 727, 1074, 1078, 1102, 1602
LweI	GCATC	2 cut(s)	849, 972
MaeI	CTAG	1 cut(s)	1608
MaeII	ACGT	6 cut(s)	198, 401, 723, 773, 954, 1485
MaeIII	GTNAC	2 cut(s)	1318, 1705
MalI	GATC	4 cut(s)	297, 462, 1423, 1588
MbiI	CCGCTC	1 cut(s)	1699
MboI	GATC	4 cut(s)	295, 460, 1421, 1586
MboII	GAAGA	6 cut(s)	16, 69, 260, 362, 553, 828
MfeI	CAATTG	2 cut(s)	549, 1115
MhlI	GDGCHC	3 cut(s)	333, 1733, 1812
MlsI	TGGCCA	1 cut(s)	991
MluI	ACGCGT	1 cut(s)	1593
MluNI	TGGCCA	1 cut(s)	991
MlyI	GAGTC	9 cut(s)	395, 424, 595, 617, 1403, 1444, 1528, 1550, 1845
MmeI	TCCRAC	5 cut(s)	492, 618, 667, 779, 1434
Mox20I	TGGCCA	1 cut(s)	991
MreI	CGCCGGCG	1 cut(s)	1631
MroNI	GCCGGC	3 cut(s)	496, 1354, 1631
MroXI	GAANNNNTTC	1 cut(s)	1595
MscI	TGGCCA	1 cut(s)	991
MseI	TTAA	4 cut(s)	695, 972, 1782, 1793
MslI	CAYNNNNRTG	1 cut(s)	659
Msp20I	TGGCCA	1 cut(s)	991
MspA1I	CMGCKG	3 cut(s)	129, 135, 427
MunI	CAATTG	2 cut(s)	549, 1115
MvaI	CCWGG	5 cut(s)	381, 477, 617, 914, 1717
MvnI	CGCG	6 cut(s)	710, 737, 1037, 1085, 1595, 1693
NaeI	GCCGGC	3 cut(s)	498, 1356, 1633
NciI	CCSGG	5 cut(s)	304, 1023, 1267, 1429, 1564
NdeII	GATC	4 cut(s)	295, 460, 1421, 1586
NgoMIV	GCCGGC	3 cut(s)	496, 1354, 1631
NheI	GCTAGC	1 cut(s)	1607
NlaIV	GGNNCC	4 cut(s)	311, 1508, 1568, 1810
NmeAIII	GCCGAG	4 cut(s)	229, 583, 1458, 1691
NmuCI	GTSAC	2 cut(s)	1318, 1705
NotI	GCGGCCGC	1 cut(s)	1694
NspI	RCATGY	3 cut(s)	322, 1497, 1615
PaeI	GCATGC	2 cut(s)	322, 1615
PaeR7I	CTCGAG	5 cut(s)	212, 221, 923, 1181, 1260
PaqCI	CACCTGC	1 cut(s)	1084
PcsI	WCGNNNNNNNCGW	5 cut(s)	192, 219, 398, 805, 1430
PdiI	GCCGGC	3 cut(s)	498, 1356, 1633
PdmI	GAANNNNTTC	1 cut(s)	1595
PfeI	GAWTC	4 cut(s)	449, 833, 1155, 1862
PflFI	GACNNNGTC	1 cut(s)	275
PflMI	CCANNNNNTGG	1 cut(s)	105
PinAI	ACCGGT	1 cut(s)	1368
PleI	GAGTC	9 cut(s)	394, 424, 595, 617, 1403, 1443, 1528, 1550, 1844
PmaCI	CACGTG	1 cut(s)	724
PmlI	CACGTG	1 cut(s)	724
PpsI	GAGTC	9 cut(s)	394, 424, 595, 617, 1403, 1443, 1528, 1550, 1844
Ppu21I	YACGTR	2 cut(s)	724, 774
PshAI	GACNNNNGTC	1 cut(s)	1203
Psp124BI	GAGCTC	2 cut(s)	333, 1733
Psp6I	CCWGG	5 cut(s)	379, 475, 615, 912, 1715
PspCI	CACGTG	1 cut(s)	724
PspFI	CCCAGC	1 cut(s)	423
PspGI	CCWGG	5 cut(s)	379, 475, 615, 912, 1715
PspN4I	GGNNCC	4 cut(s)	311, 1508, 1568, 1810
PspOMI	GGGCCC	1 cut(s)	1808
PspXI	VCTCGAGB	4 cut(s)	212, 923, 1181, 1260
PstI	CTGCAG	1 cut(s)	1092
PstNI	CAGNNNCTG	1 cut(s)	1009
PsyI	GACNNNGTC	1 cut(s)	275
RsaI	GTAC	4 cut(s)	491, 526, 776, 951
RsaNI	GTAC	4 cut(s)	490, 525, 775, 950
RseI	CAYNNNNRTG	1 cut(s)	659
Rsr2I	CGGWCCG	1 cut(s)	180
RsrII	CGGWCCG	1 cut(s)	180
SacI	GAGCTC	2 cut(s)	333, 1733
SalI	GTCGAC	1 cut(s)	620
SaqAI	TTAA	4 cut(s)	695, 972, 1782, 1793
Sau3AI	GATC	4 cut(s)	295, 460, 1421, 1586
SchI	GAGTC	9 cut(s)	395, 424, 595, 617, 1403, 1444, 1528, 1550, 1845
SduI	GDGCHC	3 cut(s)	333, 1733, 1812
SfaNI	GCATC	2 cut(s)	849, 972
SfcI	CTRYAG	2 cut(s)	124, 1088
SfiI	GGCCNNNNNGGCC	1 cut(s)	200
Sfr274I	CTCGAG	5 cut(s)	212, 221, 923, 1181, 1260
SgrAI	CRCCGGYG	2 cut(s)	338, 1631
SinI	GGWCC	5 cut(s)	180, 310, 613, 1366, 1507
SlaI	CTCGAG	5 cut(s)	212, 221, 923, 1181, 1260
SmiMI	CAYNNNNRTG	1 cut(s)	659
SmlI	CTYRAG	5 cut(s)	212, 221, 923, 1181, 1260
SmoI	CTYRAG	5 cut(s)	212, 221, 923, 1181, 1260
SphI	GCATGC	2 cut(s)	322, 1615
SspMI	CTAG	1 cut(s)	1608
SstI	GAGCTC	2 cut(s)	333, 1733
TaaI	ACNGT	2 cut(s)	277, 1751
TaiI	ACGT	6 cut(s)	201, 404, 726, 776, 957, 1488
TaqII	GACCGA	3 cut(s)	197, 533, 1524
TatI	WGTACW	1 cut(s)	949
TauI	GCSGC	9 cut(s)	132, 138, 488, 740, 1029, 1063, 1066, 1696, 1699
TfiI	GAWTC	4 cut(s)	449, 833, 1155, 1862
Tru1I	TTAA	4 cut(s)	695, 972, 1782, 1793
Tru9I	TTAA	4 cut(s)	695, 972, 1782, 1793
TscAI	CASTG	3 cut(s)	20, 910, 1544
TseFI	GTSAC	2 cut(s)	1318, 1705
TseI	GCWGC	8 cut(s)	132, 151, 217, 740, 1066, 1087, 1090, 1615
Tsp45I	GTSAC	2 cut(s)	1318, 1705
TspDTI	ATGAA	4 cut(s)	17, 129, 1319, 1871
TspGWI	ACGGA	4 cut(s)	1094, 1193, 1391, 1751
TspRI	CASTG	3 cut(s)	20, 910, 1544
Tth111I	GACNNNGTC	1 cut(s)	275
Van91I	CCANNNNNTGG	1 cut(s)	105
VpaK11BI	GGWCC	5 cut(s)	180, 310, 613, 1366, 1507
XapI	RAATTY	3 cut(s)	890, 1145, 1228
XceI	RCATGY	3 cut(s)	322, 1497, 1615
XhoI	CTCGAG	5 cut(s)	212, 221, 923, 1181, 1260
XmiI	GTMKAC	2 cut(s)	621, 1746
XmnI	GAANNNNTTC	1 cut(s)	1595
XspI	CTAG	1 cut(s)	1608

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.