Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010880

Physical Location & Seq

Genomic Coordinates Reverse (-)

6096945 .. 6105104

Gene Structure 8160 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G18410.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3852 bp

ATGGCGGTTCCTGTAGAGGAAGCAATCGCAGCTCTTTCCACATTCTCCTTAGAGGATGAGCAACCAGAAGTCCAAGGACCGGCTGTGATGGTTTCAGCTGAAAGAGCAGCAACCGATAGTCCCATCGAATATAGTGACGTCGCTGCATACCGGTTGTCTCTATCAGAAGACACAAAAGCTCTTAACCAGCTGAATACACTTATACAAGAAGGAAAAGAGATGGCGTCAATTCTATACACATATAGAAGTTGTGTCAAAGCACTGCCTCAGCTTCCCGAATCTATGAAGCATAGTCAAGCGGATTTGTATCTAGAAACATATCAAGTTTTGGACTTAGAAATGAGCCGTTTACGCGAAATTCAAAGATGGCAATCGTCGGCTTCAGCTAAATTAGCTGCTGACATGCAGCGGTTTTCCAGACCTGAACGGCGGATCAATGGTCCCACAGTCACACATCTTTGGTCAATGCTAAAGTTGCTTGACGTCTTGGTTCAGCTGGATCATCTTAAAAATGCTAAAGCTAGCATTCCTAATGATTTCTCTTGGTATAAGAGAACATTCACTCAAGTCAGTGCGCAGTGGCAAGATACAGATACAATGAGAGAAGAGTTAGACGACTTGCAGATCTTCCTGAGCACAAGATGGGCTATTTTACTCAACCTGCACGTTGAGATGTTCCGTGTAAACAATGTGGAAGATATTCTCCAAGTTCTCATAGTCTTCATCGTGGAGTCTCTGGAGTTGGATTTTGCACTACTTTTTCCTGAGCGGTATATTCTTCTCCGGGTTCTACCTGTTCTTGTTGTCTTAGCAACACCATCTGAGAAAGATACCGAGGCTTTATACAAGAGGGTAAAACTCAACAGATTGATAAACATTTTCAAGAATGATCCTGTCATTCCTGCGTTTCCAGATCTCCATCTTTCTCCTGCTGCAATTTTGAAAGAATTGTCGGTATACTTTCAAAAGTTTTCATCACAGACTCGCCTTCTGACTCTTCCAGCACCTCATGAGCTCCCTCCACGTGAAGCGCTAGAATATCAGAGGCACTATTTGATAGTCAATCACATTGGAGCTCTCCGTGCTGAGCATGACGATTTCACAATCCGATTTGCTTCATCCATGAATCAGTTATTGCTGTTGAAGTCAAACGATGGAGCATATACTGAATGGTGCAGAGAGGTCAAAGGAAACATGTACGATATGGTTGTTGAAGGTTTCCAACTGTTAAGTAGATGGACAGCACGCATTTGGGAGCAATGTGCTTGGAAATTCTCTCGCCCATGTAGGGATGCAGGAGAGACTCCTGAAGCCTCCGGATCATATTCTGATTACGAGAAGGTGGTGAGGTTCAATTATACTGCAGAAGAAAGGAAAGCCTTGGTAGAACTTGTTGGCTATATAAAGAGTGTAGGATCGATGCTGCAGCGCTGTGACACATTAGTTGCAGATGCTTTATGGGAGACAATACATGCCGAAGTTCAAGATTTTGTACAGAACACGTTAGCCACAATGTTGCGTACCACCTTCCGAAAGAAGAAAGATCTCTCAAGGATTCTTTCTGATATGCGGACACTTTCAGCTGACTGGATGGCAAATACCAGGCCCGAACATGAGATGCCATCTTCACAACATGGAAATGATGAAAGCAGAGGGAATTTCTTTTATCCGAGGCCTGTTGCCCCAACAGCAGCACAGGTGCATTGCTTGCAGTTTTTGATATATGAGGTTGTCTCTGGTGGAAATCTGAGGAGGCCAGGGGGATTCTTTGGAAATAATGGCTCTGAGATTCCTGTTAATGACTTAAAGCAATTAGAAACTTTTTTTTACAAGCTCAGCTTTTTCTTGCACATATTGGACTACTCGGCAAGTATTGGAATATTGACTGATCTGGGGTTCCTGTGGTTTAGAGAATTTTACCTGGAGTCTTCACGTGTTATTCAGTTCCCGATTGAGTGTTCACTACCATGGATGCTGATAGACTACATTCTGGAAGCCCAGAATTCAGGCCTTCTTGAGAGTGTTCTGCTACCTTTTGACATTTATAATGACTCAGCTCAACAAGCTCTGGTTGTTCTGAGGCAGAGATTCCTCTATGATGAAATTGAAGCTGAGGTGGACCATGGTTTTGATATATTTGTTTCAAGGCTCTCGGAGTCTATATTCACATATTACAAGAGTTGGTCAGCAAGTGAGCTTCTTGATCCATCATTTCTCTTTGCCTTGGACAATGGTGAAAAGTTCTCCATCCAGCCTGTGAGGTTTACTGCGTTATTTAAGATGACAAAAGTAAAGATACTTGGTAGAACAATTAATTTAAGAAGTTTGATCGCTCAAAGGATGAATAGAATCTTTAGAGAGAATCTGGAGTTTCTTTTTGACCGTTTTGAGTCCCAGGACCTATGTGCTGTAGTGGAACTGGAGAAGCTGATAGATATCCTAAAGCACTCGCATGAATTGCTTTCACAAGATCTTTCCATAGACCCTTTCAGTCTCATGTTGAATGAAATGCAAGAAAACATATCTCTTGTCTCATTTTCAAGTCGACTTGCTACACAGATTTGGTCAGAGATGCAGAGTGATTTCCTACCAAACTTCATTCTTTGCAATACCACTCAGCGATTTGTCCGTTCATCGAAAGTTCCTCCTACTCAGAAACCATCAGTGCCTTCTGCTAAGCCTAGTTTCTATTGTGGCACTCAAGACTTAAATGCAGCGCATCAAAGTTTTGCACGATTGCATAGTGGATTTTTCGGGATACCACATTTATTTTCCATAGTTAAACTTCTTGGGTCCAGATCATTGCCTTGGCTAATAAGAGCTTTACTGGACCATATATCAAATAAGATAACAACACTTGAGCCAATGATCTCTGGATTGCAAGAAGCATTGCCCAAGTCCATTGGATTGCTTTCTTTTGATGGTGGTGTTACAGGTTGTATGAAGCTTATACGAGAGCAACTAAACTGGGGCACTAAGTCAGAACTCAAATCAGAAGTTCTACGAGGAATAAAGGAAATTGGAAGTGTGATATATACAATGGGACTTCTCGATATCGTATTGGTCAGTCCTGTAGACACAAAGCGGTTCATGCAAACAGCTCCATGGTTGGGATTAATCCCAGGTGCTGAAGGACAGATAGTTAATGCTCAAGACGGCGAAAGCCCTCTTGTCAATCTCTTAAAGTCAGCAACTTCTGCAGTTGTATCAAGTCCAGGTTGTCTTAATCCAGCTGCGTTCTATACCATGTCCAAACAGGCAGAAGCTGCAGATCTTTTGTACAAGGCAAACATGAACGGTGGGAGTGTTCTTGAATACACACTTGCATTCACAAGTGCGTCGCTCGACAAATATTGCAGTAAATGGAGTGCTCCTCCAAAGACTGGCTTCGTTGATATTACAACTTCAAAGGATTTTTACCGTATATACGGTGGTCTTCAGATTGGATATCTAGAGGAGATAACAGCTCCACAGTCAGCTCAACATGAAGTCCTCGGTGATTCAATAGCTTGGGGTGGTTGCACCATTATTTACTTGCTCGGCCAGCAACTTCACTTTGAGTTGTTTGATTTCTCGTACCAAGTACTCAATGTCTCTGAGGTTGAAACTGTCTCTGCTTCACATACCCATAGGAATCCACAAATCCATCAGGGATGGGAAGGTTTGTTGGAAGGGATGAAGAAAGCTCGGAGGCTGAACAACCATGTCTTCTCCATGCTTAAAGCTCGTTGTCCTCTAGAAGACAAAACGGCATGTGCCATCAAACAGAGCGGCGCACCGCTGCCACGTGTCAGGTTTGAGAATACCGTGTCTGCTTTCGAGACTCTACCTCAGAAAGGCACCGTTGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008150 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010638 GO:0016043 GO:0030029 GO:0030036 GO:0030154 GO:0030832 GO:0030833 GO:0030838 GO:0031209 GO:0031334 GO:0032271 GO:0032273 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0032989 GO:0032991 GO:0033043 GO:0043254 GO:0044087 GO:0044089 GO:0044424 GO:0044444 GO:0044464 GO:0045010 GO:0048468 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0090558 GO:0090626 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko03013 ko04810 map03013 map04810

Pfam Domains

Protein Families

DUF1394 FragX_IP

Protein Analysis

1283

Amino Acids

145.48

Weight (kDa)

5.65

Isoelectric Point (pI)

44.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FragX_IP	PF05994	350 - 1241	0.0	Cytoplasmic Fragile-X interacting family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010880)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18410 AT5G18410 AT5G18410
fragaria_vesca	FvH4_6g01330 FvH4_6g01330 FvH4_6g01330
malus_domestica	MD12G1252900.v1.1
prunus_persica	Prupe.6G354800_v2.0.a1
pyrus_communis	pycom12g23200
rosa_chinensis	RchiOBHm_Chr3g0448901
rosa_laevigata	RLG00000025868
rosa_multiflora	Rmu_sc0003116.1_g000019
rosa_roxburghii	Rroxscaffold_6G00427090
rosa_rugosa	Rorug02G0617100 Rorug02G0617100
rosa_samantha	Rh3AG015400 Rh3BG015200 Rh3CG014100 Rh3DG015700
rosa_wichuraiana	Rw3G001140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2046
AatII	GACGTC	2 cut(s)	141, 486
Acc16I	TGCGCA	1 cut(s)	576
Acc36I	ACCTGC	1 cut(s)	669
AccB1I	GGYRCC	1 cut(s)	3839
AccB7I	CCANNNNNTGG	1 cut(s)	3383
AccBSI	CCGCTC	2 cut(s)	769, 3771
AccI	GTMKAC	3 cut(s)	957, 2545, 3075
AccII	CGCG	1 cut(s)	354
AccIII	TCCGGA	1 cut(s)	1316
AciI	CCGC	9 cut(s)	5, 299, 409, 430, 769, 1570, 3085, 3771, 3779
AclWI	GGATC	6 cut(s)	440, 507, 884, 1327, 1423, 2198
AcoI	YGGCCR	1 cut(s)	3541
AcsI	RAATTY	5 cut(s)	357, 1271, 1657, 1913, 2002
AcuI	CTGAAG	4 cut(s)	366, 1329, 3150, 3422
AcvI	CACGTG	3 cut(s)	1025, 1934, 3788
AcyI	GRCGYC	3 cut(s)	138, 224, 483
AfaI	GTAC	6 cut(s)	1199, 1494, 1522, 3281, 3578, 3585
AfeI	AGCGCT	2 cut(s)	1032, 1430
AfiI	CCNNNNNNNGG	5 cut(s)	79, 1288, 3110, 3383, 3836
AflIII	ACRYGT	4 cut(s)	1194, 1500, 1933, 3787
AgeI	ACCGGT	1 cut(s)	150
AjnI	CCWGG	6 cut(s)	1601, 1756, 1920, 2394, 3121, 3214
Alw21I	GWGCWC	4 cut(s)	638, 1017, 1078, 3373
AlwI	GGATC	6 cut(s)	440, 507, 884, 1327, 1423, 2198
AlwNI	CAGNNNCTG	2 cut(s)	3128, 3266
Aor13HI	TCCGGA	1 cut(s)	1316
Aor51HI	AGCGCT	2 cut(s)	1032, 1430
AoxI	GGCC	5 cut(s)	1604, 1673, 1754, 2008, 3541
ApoI	RAATTY	5 cut(s)	357, 1271, 1657, 1913, 2002
ArsI	GACNNNNNNTTYG	2 cut(s)	2111, 2143
AseI	ATTAAT	2 cut(s)	2313, 3116
AsiGI	ACCGGT	1 cut(s)	150
Asp700I	GAANNNNTTC	1 cut(s)	699
AspLEI	GCGC	5 cut(s)	577, 1033, 1431, 2719, 3776
AspS9I	GGNCC	7 cut(s)	77, 440, 1605, 2119, 2398, 2793, 2830
AsuC2I	CCSGG	1 cut(s)	785
AsuHPI	GGTGA	3 cut(s)	1357, 2246, 3509
AsuNHI	GCTAGC	1 cut(s)	521
AvaII	GGWCC	6 cut(s)	77, 440, 2119, 2398, 2793, 2830
BaeGI	GKGCMC	1 cut(s)	2975
BanI	GGYRCC	1 cut(s)	3839
BanII	GRGCYC	2 cut(s)	1017, 1078
BbrPI	CACGTG	3 cut(s)	1025, 1934, 3788
BbsI	GAAGAC	6 cut(s)	174, 712, 1920, 3428, 3700, 3747
Bbv12I	GWGCWC	4 cut(s)	638, 1017, 1078, 3373
BbvCI	CCTCAGC	2 cut(s)	267, 2112
BceAI	ACGGC	4 cut(s)	330, 443, 3172, 3765
BciT130I	CCWGG	6 cut(s)	1603, 1758, 1922, 2396, 3123, 3216
BciVI	GTATCC	1 cut(s)	2751
BcnI	CCSGG	1 cut(s)	785
BfaI	CTAG	6 cut(s)	311, 522, 1034, 2682, 3452, 3737
BfmI	CTRYAG	7 cut(s)	12, 1362, 1424, 2409, 3072, 3198, 3267
BfoI	RGCGCY	2 cut(s)	1034, 1432
BfuAI	ACCTGC	1 cut(s)	669
BfuI	GTATCC	1 cut(s)	2751
BglII	AGATCT	5 cut(s)	624, 913, 1543, 2470, 3271
BlpI	GCTNAGC	3 cut(s)	1086, 1835, 2676
BmcAI	AGTACT	1 cut(s)	3585
Bme1390I	CCNGG	7 cut(s)	785, 1603, 1758, 1922, 2396, 3123, 3216
Bme18I	GGWCC	6 cut(s)	77, 440, 2119, 2398, 2793, 2830
BmgT120I	GGNCC	7 cut(s)	77, 440, 1605, 2119, 2398, 2793, 2830
BmiI	GGNNCC	5 cut(s)	9, 442, 1898, 2794, 3841
BmrFI	CCNGG	7 cut(s)	785, 1603, 1758, 1922, 2396, 3123, 3216
BmrI	ACTGGG	1 cut(s)	2977
BmsI	GCATC	7 cut(s)	1282, 1410, 1441, 1608, 1962, 2562, 2728
BmtI	GCTAGC	1 cut(s)	525
BmuI	ACTGGG	1 cut(s)	2977
BpiI	GAAGAC	6 cut(s)	174, 712, 1920, 3428, 3700, 3747
BplI	GAGNNNNNCTC	4 cut(s)	1718, 1750, 3358, 3390
BpmI	CTGGAG	4 cut(s)	758, 1943, 2387, 2441
Bpu10I	CCTNAGC	4 cut(s)	267, 632, 765, 2112
Bpu1102I	GCTNAGC	3 cut(s)	1086, 1835, 2676
BpuEI	CTTGAG	6 cut(s)	549, 1534, 2036, 2685, 2879, 3135
BpuMI	CCSGG	1 cut(s)	785
Bsa29I	ATCGAT	1 cut(s)	1418
BsaAI	YACGTR	3 cut(s)	1025, 1934, 3788
BsaBI	GATNNNNATC	4 cut(s)	306, 370, 918, 2435
BsaHI	GRCGYC	3 cut(s)	138, 224, 483
BsaWI	WCCGGW	2 cut(s)	150, 1316
Bsc4I	CCNNNNNNNGG	5 cut(s)	79, 1288, 3110, 3383, 3836
Bse118I	RCCGGY	2 cut(s)	79, 150
Bse1I	ACTGG	5 cut(s)	1592, 2424, 2832, 2972, 3388
Bse3DI	GCAATG	4 cut(s)	1265, 1702, 2801, 2888
Bse8I	GATNNNNATC	4 cut(s)	306, 370, 918, 2435
BseAI	TCCGGA	1 cut(s)	1316
BseBI	CCWGG	6 cut(s)	1603, 1758, 1922, 2396, 3123, 3216
BseCI	ATCGAT	1 cut(s)	1418
BseGI	GGATG	9 cut(s)	61, 1118, 1297, 1596, 1977, 2247, 2346, 3659, 3681
BseJI	GATNNNNATC	4 cut(s)	306, 370, 918, 2435
BseLI	CCNNNNNNNGG	5 cut(s)	79, 1288, 3110, 3383, 3836
BseMI	GCAATG	4 cut(s)	1265, 1702, 2801, 2888
BseNI	ACTGG	5 cut(s)	1592, 2424, 2832, 2972, 3388
BseRI	GAGGAG	3 cut(s)	1765, 3363, 3470
BseSI	GKGCMC	1 cut(s)	2975
BsgI	GTGCAG	2 cut(s)	647, 1195
Bsh1236I	CGCG	1 cut(s)	354
BshFI	GGCC	5 cut(s)	1606, 1675, 1756, 2010, 3543
BshNI	GGYRCC	1 cut(s)	3839
BshTI	ACCGGT	1 cut(s)	150
BshVI	ATCGAT	1 cut(s)	1418
BsiHKAI	GWGCWC	4 cut(s)	638, 1017, 1078, 3373
BsiSI	CCGG	4 cut(s)	80, 151, 784, 1317
BslFI	GGGAC	4 cut(s)	105, 426, 2377, 3057
BslI	CCNNNNNNNGG	5 cut(s)	79, 1288, 3110, 3383, 3836
BsmFI	GGGAC	4 cut(s)	105, 426, 2377, 3057
BsmI	GAATGC	2 cut(s)	525, 3326
BsnI	GGCC	5 cut(s)	1606, 1675, 1756, 2010, 3543
Bsp1286I	GDGCHC	5 cut(s)	638, 1017, 1078, 2975, 3373
Bsp13I	TCCGGA	1 cut(s)	1316
Bsp1407I	TGTACA	2 cut(s)	1492, 3279
Bsp1720I	GCTNAGC	3 cut(s)	1086, 1835, 2676
Bsp19I	CCATGG	3 cut(s)	1967, 2122, 3104
BspACI	CCGC	9 cut(s)	5, 299, 409, 430, 769, 1570, 3085, 3771, 3779
BspANI	GGCC	5 cut(s)	1606, 1675, 1756, 2010, 3543
BspDI	ATCGAT	1 cut(s)	1418
BspEI	TCCGGA	1 cut(s)	1316
BspFNI	CGCG	1 cut(s)	354
BspHI	TCATGA	1 cut(s)	1009
BspLI	GGNNCC	5 cut(s)	9, 442, 1898, 2794, 3841
BspMAI	CTGCAG	4 cut(s)	1366, 1428, 3202, 3271
BspMI	ACCTGC	1 cut(s)	669
BspOI	GCTAGC	1 cut(s)	525
BspPI	GGATC	6 cut(s)	440, 507, 884, 1327, 1423, 2198
BspT107I	GGYRCC	1 cut(s)	3839
BsrBI	CCGCTC	2 cut(s)	769, 3771
BsrDI	GCAATG	4 cut(s)	1265, 1702, 2801, 2888
BsrFI	RCCGGY	2 cut(s)	79, 150
BsrGI	TGTACA	2 cut(s)	1492, 3279
BsrI	ACTGG	5 cut(s)	1592, 2424, 2832, 2972, 3388
BssAI	RCCGGY	2 cut(s)	79, 150
BssNAI	GTATAC	1 cut(s)	958
BssNI	GRCGYC	3 cut(s)	138, 224, 483
BssT1I	CCWWGG	7 cut(s)	73, 1380, 1967, 2122, 2223, 2807, 3104
Bst1107I	GTATAC	1 cut(s)	958
Bst2UI	CCWGG	6 cut(s)	1603, 1758, 1922, 2396, 3123, 3216
Bst6I	CTCTTC	2 cut(s)	600, 1002
BstACI	GRCGYC	3 cut(s)	138, 224, 483
BstAPI	GCANNNNNTGC	4 cut(s)	1708, 2458, 3197, 3266
BstAUI	TGTACA	2 cut(s)	1492, 3279
BstBAI	YACGTR	3 cut(s)	1025, 1934, 3788
BstC8I	GCNNGC	4 cut(s)	523, 1246, 1709, 3545
BstDSI	CCRYGG	3 cut(s)	1967, 2122, 3104
BstENI	CCTNNNNNAGG	1 cut(s)	3834
BstF5I	GGATG	9 cut(s)	61, 1118, 1297, 1596, 1977, 2247, 2346, 3659, 3681
BstFNI	CGCG	1 cut(s)	354
BstH2I	RGCGCY	2 cut(s)	1034, 1432
BstHHI	GCGC	5 cut(s)	577, 1033, 1431, 2719, 3776
BstNI	CCWGG	6 cut(s)	1603, 1758, 1922, 2396, 3123, 3216
BstNSI	RCATGY	4 cut(s)	406, 1198, 1475, 3756
BstSCI	CCNGG	7 cut(s)	783, 1601, 1756, 1920, 2394, 3121, 3214
BstSFI	CTRYAG	7 cut(s)	12, 1362, 1424, 2409, 3072, 3198, 3267
BstSLI	GKGCMC	1 cut(s)	2975
BstUI	CGCG	1 cut(s)	354
BstV2I	GAAGAC	6 cut(s)	174, 712, 1920, 3428, 3700, 3747
BstX2I	RGATCY	5 cut(s)	624, 913, 1543, 2470, 3271
BstYI	RGATCY	5 cut(s)	624, 913, 1543, 2470, 3271
BstZ17I	GTATAC	1 cut(s)	958
Bsu15I	ATCGAT	1 cut(s)	1418
BsuI	GTATCC	1 cut(s)	2751
BsuRI	GGCC	5 cut(s)	1606, 1675, 1756, 2010, 3543
BsuTUI	ATCGAT	1 cut(s)	1418
BtgI	CCRYGG	3 cut(s)	1967, 2122, 3104
BtsCI	GGATG	9 cut(s)	61, 1118, 1297, 1596, 1977, 2247, 2346, 3659, 3681
BtsI	GCAGTG	2 cut(s)	260, 584
BtsIMutI	CAGTG	4 cut(s)	260, 577, 584, 2670
BveI	ACCTGC	1 cut(s)	669
Cac8I	GCNNGC	4 cut(s)	523, 1246, 1709, 3545
CaiI	CAGNNNCTG	2 cut(s)	3128, 3266
CciI	TCATGA	1 cut(s)	1009
CfoI	GCGC	5 cut(s)	577, 1033, 1431, 2719, 3776
Cfr10I	RCCGGY	2 cut(s)	79, 150
Cfr13I	GGNCC	7 cut(s)	77, 440, 1605, 2119, 2398, 2793, 2830
ClaI	ATCGAT	1 cut(s)	1418
CseI	GACGC	2 cut(s)	213, 3327
Csp6I	GTAC	6 cut(s)	1198, 1493, 1521, 3280, 3577, 3584
CspAI	ACCGGT	1 cut(s)	150
CviQI	GTAC	6 cut(s)	1198, 1493, 1521, 3280, 3577, 3584
EaeI	YGGCCR	1 cut(s)	3541
Eam1104I	CTCTTC	2 cut(s)	600, 1002
EarI	CTCTTC	2 cut(s)	600, 1002
EciI	GGCGGA	1 cut(s)	445
Ecl136II	GAGCTC	2 cut(s)	1015, 1076
Eco130I	CCWWGG	7 cut(s)	73, 1380, 1967, 2122, 2223, 2807, 3104
Eco147I	AGGCCT	2 cut(s)	1675, 2010
Eco24I	GRGCYC	2 cut(s)	1017, 1078
Eco32I	GATATC	3 cut(s)	2437, 3055, 3449
Eco47I	GGWCC	6 cut(s)	77, 440, 2119, 2398, 2793, 2830
Eco47III	AGCGCT	2 cut(s)	1032, 1430
Eco53kI	GAGCTC	2 cut(s)	1015, 1076
Eco57I	CTGAAG	4 cut(s)	366, 1329, 3150, 3422
Eco72I	CACGTG	3 cut(s)	1025, 1934, 3788
EcoICRI	GAGCTC	2 cut(s)	1015, 1076
EcoNI	CCTNNNNNAGG	1 cut(s)	3834
EcoO109I	RGGNCCY	1 cut(s)	2398
EcoRI	GAATTC	1 cut(s)	2002
EcoRII	CCWGG	6 cut(s)	1601, 1756, 1920, 2394, 3121, 3214
EcoRV	GATATC	3 cut(s)	2437, 3055, 3449
EcoT14I	CCWWGG	7 cut(s)	73, 1380, 1967, 2122, 2223, 2807, 3104
EcoT38I	GRGCYC	2 cut(s)	1017, 1078
ErhI	CCWWGG	7 cut(s)	73, 1380, 1967, 2122, 2223, 2807, 3104
FalI	AAGNNNNNCTT	4 cut(s)	1823, 1855, 3371, 3403
FaqI	GGGAC	4 cut(s)	105, 426, 2377, 3057
FblI	GTMKAC	3 cut(s)	957, 2545, 3075
FokI	GGATG	9 cut(s)	68, 1105, 1304, 1603, 1984, 2234, 2353, 3666, 3688
FriOI	GRGCYC	2 cut(s)	1017, 1078
FspBI	CTAG	6 cut(s)	311, 522, 1034, 2682, 3452, 3737
FspI	TGCGCA	1 cut(s)	576
GlaI	GCGC	5 cut(s)	576, 1032, 1430, 2718, 3775
GsuI	CTGGAG	4 cut(s)	758, 1943, 2387, 2441
HaeII	RGCGCY	2 cut(s)	1034, 1432
HaeIII	GGCC	5 cut(s)	1606, 1675, 1756, 2010, 3543
HapII	CCGG	4 cut(s)	80, 151, 784, 1317
HgaI	GACGC	2 cut(s)	213, 3327
HhaI	GCGC	5 cut(s)	577, 1033, 1431, 2719, 3776
Hin1I	GRCGYC	3 cut(s)	138, 224, 483
Hin6I	GCGC	5 cut(s)	575, 1031, 1429, 2717, 3774
HinP1I	GCGC	5 cut(s)	575, 1031, 1429, 2717, 3774
HincII	GTYRAC	1 cut(s)	2546
HindII	GTYRAC	1 cut(s)	2546
HindIII	AAGCTT	1 cut(s)	2945
HpaII	CCGG	4 cut(s)	80, 151, 784, 1317
HphI	GGTGA	3 cut(s)	1357, 2246, 3509
Hpy166II	GTNNAC	8 cut(s)	350, 685, 958, 1961, 2119, 2265, 2546, 3076
Hpy8I	GTNNAC	8 cut(s)	350, 685, 958, 1961, 2119, 2265, 2546, 3076
Hpy99I	CGWCG	3 cut(s)	143, 379, 3343
HpyCH4IV	ACGT	7 cut(s)	138, 483, 666, 1024, 1502, 1933, 3787
HpySE526I	ACGT	7 cut(s)	138, 483, 666, 1024, 1502, 1933, 3787
Hsp92I	GRCGYC	3 cut(s)	138, 224, 483
HspAI	GCGC	5 cut(s)	575, 1031, 1429, 2717, 3774
Kpn2I	TCCGGA	1 cut(s)	1316
LmnI	GCTCC	7 cut(s)	1020, 1073, 1157, 1255, 3106, 3376, 3472
LweI	GCATC	7 cut(s)	1282, 1410, 1441, 1608, 1962, 2562, 2728
MaeI	CTAG	6 cut(s)	311, 522, 1034, 2682, 3452, 3737
MaeII	ACGT	7 cut(s)	138, 483, 666, 1024, 1502, 1933, 3787
MaeIII	GTNAC	4 cut(s)	134, 448, 1433, 2929
MbiI	CCGCTC	2 cut(s)	769, 3771
MflI	RGATCY	5 cut(s)	624, 913, 1543, 2470, 3271
MhlI	GDGCHC	5 cut(s)	638, 1017, 1078, 2975, 3373
MlyI	GAGTC	9 cut(s)	740, 976, 988, 1297, 1934, 2045, 2165, 2399, 3817
MmeI	TCCRAC	3 cut(s)	723, 1246, 3648
MroI	TCCGGA	1 cut(s)	1316
MroXI	GAANNNNTTC	1 cut(s)	699
MslI	CAYNNNNRTG	3 cut(s)	1638, 1966, 2451
MspA1I	CMGCKG	7 cut(s)	98, 190, 409, 496, 1583, 3233, 3781
MspI	CCGG	4 cut(s)	80, 151, 784, 1317
MspR9I	CCNGG	7 cut(s)	785, 1603, 1758, 1922, 2396, 3123, 3216
Mva1269I	GAATGC	2 cut(s)	525, 3326
MvaI	CCWGG	6 cut(s)	1603, 1758, 1922, 2396, 3123, 3216
MvnI	CGCG	1 cut(s)	354
NciI	CCSGG	1 cut(s)	785
NcoI	CCATGG	3 cut(s)	1967, 2122, 3104
NheI	GCTAGC	1 cut(s)	521
NlaIV	GGNNCC	5 cut(s)	9, 442, 1898, 2794, 3841
NmeAIII	GCCGAG	2 cut(s)	1844, 3519
NmuCI	GTSAC	3 cut(s)	134, 448, 1433
NsbI	TGCGCA	1 cut(s)	576
NspI	RCATGY	4 cut(s)	406, 1198, 1475, 3756
PagI	TCATGA	1 cut(s)	1009
PceI	AGGCCT	2 cut(s)	1675, 2010
PciI	ACATGT	1 cut(s)	1194
PctI	GAATGC	2 cut(s)	525, 3326
PdmI	GAANNNNTTC	1 cut(s)	699
PflMI	CCANNNNNTGG	1 cut(s)	3383
PinAI	ACCGGT	1 cut(s)	150
PleI	GAGTC	9 cut(s)	739, 976, 988, 1297, 1933, 2045, 2164, 2398, 3817
PmaCI	CACGTG	3 cut(s)	1025, 1934, 3788
PmlI	CACGTG	3 cut(s)	1025, 1934, 3788
PpsI	GAGTC	9 cut(s)	739, 976, 988, 1297, 1933, 2045, 2164, 2398, 3817
Ppu21I	YACGTR	3 cut(s)	1025, 1934, 3788
PpuMI	RGGWCCY	1 cut(s)	2398
PscI	ACATGT	1 cut(s)	1194
PshBI	ATTAAT	2 cut(s)	2313, 3116
PsiI	TTATAA	1 cut(s)	2046
Psp124BI	GAGCTC	2 cut(s)	1017, 1078
Psp5II	RGGWCCY	1 cut(s)	2398
Psp6I	CCWGG	6 cut(s)	1601, 1756, 1920, 2394, 3121, 3214
PspCI	CACGTG	3 cut(s)	1025, 1934, 3788
PspGI	CCWGG	6 cut(s)	1601, 1756, 1920, 2394, 3121, 3214
PspN4I	GGNNCC	5 cut(s)	9, 442, 1898, 2794, 3841
PspPI	GGNCC	7 cut(s)	77, 440, 1605, 2119, 2398, 2793, 2830
PspPPI	RGGWCCY	1 cut(s)	2398
PstI	CTGCAG	4 cut(s)	1366, 1428, 3202, 3271
PstNI	CAGNNNCTG	2 cut(s)	3128, 3266
PsuI	RGATCY	5 cut(s)	624, 913, 1543, 2470, 3271
PvuII	CAGCTG	5 cut(s)	98, 190, 496, 1583, 3233
RsaI	GTAC	6 cut(s)	1199, 1494, 1522, 3281, 3578, 3585
RsaNI	GTAC	6 cut(s)	1198, 1493, 1521, 3280, 3577, 3584
RseI	CAYNNNNRTG	3 cut(s)	1638, 1966, 2451
SacI	GAGCTC	2 cut(s)	1017, 1078
SalI	GTCGAC	1 cut(s)	2544
Sau96I	GGNCC	7 cut(s)	77, 440, 1605, 2119, 2398, 2793, 2830
ScaI	AGTACT	1 cut(s)	3585
SchI	GAGTC	9 cut(s)	740, 976, 988, 1297, 1934, 2045, 2165, 2399, 3817
ScrFI	CCNGG	7 cut(s)	785, 1603, 1758, 1922, 2396, 3123, 3216
SduI	GDGCHC	5 cut(s)	638, 1017, 1078, 2975, 3373
SfaNI	GCATC	7 cut(s)	1282, 1410, 1441, 1608, 1962, 2562, 2728
SfcI	CTRYAG	7 cut(s)	12, 1362, 1424, 2409, 3072, 3198, 3267
SinI	GGWCC	6 cut(s)	77, 440, 2119, 2398, 2793, 2830
SmiMI	CAYNNNNRTG	3 cut(s)	1638, 1966, 2451
SmlI	CTYRAG	6 cut(s)	564, 1549, 2015, 2700, 2858, 3150
SmoI	CTYRAG	6 cut(s)	564, 1549, 2015, 2700, 2858, 3150
SseBI	AGGCCT	2 cut(s)	1675, 2010
SsiI	CCGC	9 cut(s)	5, 299, 409, 430, 769, 1570, 3085, 3771, 3779
SspI	AATATT	2 cut(s)	1881, 3353
SspMI	CTAG	6 cut(s)	311, 522, 1034, 2682, 3452, 3737
SstI	GAGCTC	2 cut(s)	1017, 1078
StuI	AGGCCT	2 cut(s)	1675, 2010
StyD4I	CCNGG	7 cut(s)	783, 1601, 1756, 1920, 2394, 3121, 3214
StyI	CCWWGG	7 cut(s)	73, 1380, 1967, 2122, 2223, 2807, 3104
TaiI	ACGT	7 cut(s)	141, 486, 669, 1027, 1505, 1936, 3790
TaqI	TCGA	7 cut(s)	126, 1418, 2545, 2636, 3051, 3345, 3819
TatI	WGTACW	3 cut(s)	1492, 3279, 3583
TauI	GCSGC	1 cut(s)	3774
TscAI	CASTG	4 cut(s)	267, 577, 584, 2670
TseFI	GTSAC	3 cut(s)	134, 448, 1433
Tsp45I	GTSAC	3 cut(s)	134, 448, 1433
TspGWI	ACGGA	3 cut(s)	668, 1070, 2618
TspRI	CASTG	4 cut(s)	267, 577, 584, 2670
Van91I	CCANNNNNTGG	1 cut(s)	3383
VpaK11BI	GGWCC	6 cut(s)	77, 440, 2119, 2398, 2793, 2830
VspI	ATTAAT	2 cut(s)	2313, 3116
XagI	CCTNNNNNAGG	1 cut(s)	3834
XapI	RAATTY	5 cut(s)	357, 1271, 1657, 1913, 2002
XbaI	TCTAGA	3 cut(s)	310, 3451, 3736
XceI	RCATGY	4 cut(s)	406, 1198, 1475, 3756
XmiI	GTMKAC	3 cut(s)	957, 2545, 3075
XmnI	GAANNNNTTC	1 cut(s)	699
XspI	CTAG	6 cut(s)	311, 522, 1034, 2682, 3452, 3737
ZraI	GACGTC	2 cut(s)	139, 484
ZrmI	AGTACT	1 cut(s)	3585

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.