Cytoplasmic Fragile-X interacting family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G18410 AT5G18410 AT5G18410 |
| fragaria_vesca | FvH4_6g01330 FvH4_6g01330 FvH4_6g01330 |
| malus_domestica | MD12G1252900.v1.1 |
| prunus_persica | Prupe.6G354800_v2.0.a1 |
| pyrus_communis | pycom12g23200 |
| rosa_chinensis | RchiOBHm_Chr3g0448901 |
| rosa_laevigata | RLG00000025868 |
| rosa_multiflora | Rmu_sc0003116.1_g000019 |
| rosa_roxburghii | Rroxscaffold_6G00427090 |
| rosa_rugosa | Rorug02G0617100 Rorug02G0617100 |
| rosa_samantha | Rh3AG015400 Rh3BG015200 Rh3CG014100 Rh3DG015700 |
| rosa_wichuraiana | Rw3G001140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1991 |
| AccB1I | GGYRCC | 2 cut(s) | 3219, 3773 |
| AccBSI | CCGCTC | 2 cut(s) | 760, 2332 |
| AccI | GTMKAC | 2 cut(s) | 349, 2539 |
| AccII | CGCG | 3 cut(s) | 672, 1017, 1074 |
| AcoI | YGGCCR | 2 cut(s) | 1503, 1869 |
| AcsI | RAATTY | 5 cut(s) | 84, 649, 1907, 2587, 3441 |
| AcuI | CTGAAG | 3 cut(s) | 482, 1154, 1296 |
| AcvI | CACGTG | 1 cut(s) | 3706 |
| AdeI | CACNNNGTG | 1 cut(s) | 633 |
| AfaI | GTAC | 6 cut(s) | 567, 836, 1344, 2698, 3281, 3471 |
| AfeI | AGCGCT | 1 cut(s) | 3370 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 1669, 2556, 2921, 3106, 3107, 3383, 3384, 3655 |
| AflIII | ACRYGT | 1 cut(s) | 3705 |
| AhlI | ACTAGT | 1 cut(s) | 3332 |
| AjnI | CCWGG | 8 cut(s) | 1479, 1750, 1961, 2807, 3118, 3214, 3579, 3648 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 963, 995, 2669, 2701, 3217, 3249, 3371, 3403 |
| AleI | CACNNNNGTG | 1 cut(s) | 479 |
| Alw21I | GWGCWC | 2 cut(s) | 2824, 3564 |
| Alw26I | GTCTC | 4 cut(s) | 1454, 2391, 2492, 3814 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3266 |
| Ama87I | CYCGRG | 3 cut(s) | 50, 413, 3539 |
| Aor51HI | AGCGCT | 1 cut(s) | 3370 |
| AoxI | GGCC | 8 cut(s) | 21, 410, 430, 1503, 1667, 1869, 3661, 3840 |
| ApeKI | GCWGC | 9 cut(s) | 386, 923, 1428, 1685, 2180, 2714, 3266, 3519, 3550 |
| ApoI | RAATTY | 5 cut(s) | 84, 649, 1907, 2587, 3441 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 69, 101, 2105, 2137 |
| AseI | ATTAAT | 1 cut(s) | 426 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1209, 3000, 3413 |
| AspLEI | GCGC | 3 cut(s) | 110, 1076, 3371 |
| AspS9I | GGNCC | 9 cut(s) | 77, 411, 431, 453, 1477, 1540, 1693, 2113, 3583 |
| AsuC2I | CCSGG | 1 cut(s) | 81 |
| AsuHPI | GGTGA | 3 cut(s) | 987, 1646, 3509 |
| AsuII | TTCGAA | 1 cut(s) | 3407 |
| AvaI | CYCGRG | 3 cut(s) | 50, 413, 3539 |
| AvaII | GGWCC | 7 cut(s) | 77, 453, 1477, 1540, 1693, 2113, 3583 |
| BaeGI | GKGCMC | 2 cut(s) | 3224, 3778 |
| BalI | TGGCCA | 2 cut(s) | 1505, 1871 |
| BamHI | GGATCC | 3 cut(s) | 1064, 1551, 1616 |
| BanI | GGYRCC | 2 cut(s) | 3219, 3773 |
| BanII | GRGCYC | 2 cut(s) | 3564, 3638 |
| BauI | CACGAG | 1 cut(s) | 1926 |
| BbrPI | CACGTG | 1 cut(s) | 3706 |
| BbsI | GAAGAC | 6 cut(s) | 174, 971, 980, 1914, 3428, 3747 |
| Bbv12I | GWGCWC | 2 cut(s) | 2824, 3564 |
| BbvCI | CCTCAGC | 4 cut(s) | 267, 1473, 2106, 3062 |
| BbvI | GCAGC | 9 cut(s) | 373, 910, 1440, 1672, 2192, 2726, 3253, 3506, 3537 |
| BceAI | ACGGC | 1 cut(s) | 3676 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 125, 159, 2049, 2083 |
| BciT130I | CCWGG | 8 cut(s) | 1481, 1752, 1963, 2809, 3120, 3216, 3581, 3650 |
| BclI | TGATCA | 2 cut(s) | 490, 861 |
| BcnI | CCSGG | 1 cut(s) | 81 |
| BcoDI | GTCTC | 4 cut(s) | 1454, 2391, 2492, 3814 |
| BcuI | ACTAGT | 1 cut(s) | 3332 |
| BfaI | CTAG | 9 cut(s) | 311, 383, 408, 1548, 2009, 2796, 2828, 3333, 3452 |
| BfmI | CTRYAG | 5 cut(s) | 387, 435, 2879, 3267, 3504 |
| BfoI | RGCGCY | 1 cut(s) | 3372 |
| BfuAI | ACCTGC | 1 cut(s) | 1991 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1756 |
| BglII | AGATCT | 4 cut(s) | 904, 1882, 2464, 3271 |
| BlpI | GCTNAGC | 3 cut(s) | 1829, 2052, 2328 |
| Bme1390I | CCNGG | 9 cut(s) | 81, 1481, 1752, 1963, 2809, 3120, 3216, 3581, 3650 |
| Bme18I | GGWCC | 7 cut(s) | 77, 453, 1477, 1540, 1693, 2113, 3583 |
| BmeT110I | CYCGRG | 3 cut(s) | 50, 413, 3539 |
| BmgT120I | GGNCC | 9 cut(s) | 77, 411, 431, 453, 1477, 1540, 1693, 2113, 3583 |
| BmiI | GGNNCC | 7 cut(s) | 1066, 1553, 1618, 2637, 2862, 3221, 3775 |
| BmrFI | CCNGG | 9 cut(s) | 81, 1481, 1752, 1963, 2809, 3120, 3216, 3581, 3650 |
| BmrI | ACTGGG | 1 cut(s) | 116 |
| BmuI | ACTGGG | 1 cut(s) | 116 |
| BpiI | GAAGAC | 6 cut(s) | 174, 971, 980, 1914, 3428, 3747 |
| BpmI | CTGGAG | 2 cut(s) | 903, 1773 |
| Bpu10I | CCTNAGC | 8 cut(s) | 267, 623, 756, 1473, 1689, 2106, 3062, 3322 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 1829, 2052, 2328 |
| Bpu14I | TTCGAA | 1 cut(s) | 3407 |
| BpuEI | CTTGAG | 4 cut(s) | 2006, 2057, 2685, 3132 |
| BpuMI | CCSGG | 1 cut(s) | 81 |
| BsaAI | YACGTR | 3 cut(s) | 353, 1981, 3706 |
| BsaBI | GATNNNNATC | 3 cut(s) | 909, 2455, 3417 |
| BsaJI | CCNNGG | 8 cut(s) | 1664, 1961, 2446, 2807, 3101, 3214, 3215, 3649 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3695, 3725 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 1669, 2556, 2921, 3106, 3107, 3383, 3384, 3655 |
| Bse118I | RCCGGY | 1 cut(s) | 1669 |
| Bse1I | ACTGG | 9 cut(s) | 122, 884, 1166, 1383, 1589, 1728, 2067, 2862, 3304 |
| Bse3DI | GCAATG | 3 cut(s) | 24, 2801, 2888 |
| Bse8I | GATNNNNATC | 3 cut(s) | 909, 2455, 3417 |
| BseBI | CCWGG | 8 cut(s) | 1481, 1752, 1963, 2809, 3120, 3216, 3581, 3650 |
| BseDI | CCNNGG | 8 cut(s) | 1664, 1961, 2446, 2807, 3101, 3214, 3215, 3649 |
| BseJI | GATNNNNATC | 3 cut(s) | 909, 2455, 3417 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 1669, 2556, 2921, 3106, 3107, 3383, 3384, 3655 |
| BseMI | GCAATG | 3 cut(s) | 24, 2801, 2888 |
| BseNI | ACTGG | 9 cut(s) | 122, 884, 1166, 1383, 1589, 1728, 2067, 2862, 3304 |
| BseRI | GAGGAG | 1 cut(s) | 611 |
| BseSI | GKGCMC | 2 cut(s) | 3224, 3778 |
| BseXI | GCAGC | 9 cut(s) | 373, 910, 1440, 1672, 2192, 2726, 3253, 3506, 3537 |
| BseYI | CCCAGC | 4 cut(s) | 2175, 2610, 3040, 3493 |
| BsgI | GTGCAG | 5 cut(s) | 1218, 1380, 1447, 3144, 3505 |
| Bsh1236I | CGCG | 3 cut(s) | 672, 1017, 1074 |
| BshFI | GGCC | 8 cut(s) | 23, 412, 432, 1505, 1669, 1871, 3663, 3842 |
| BshNI | GGYRCC | 2 cut(s) | 3219, 3773 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2824, 3564 |
| BsiHKCI | CYCGRG | 3 cut(s) | 50, 413, 3539 |
| BsiSI | CCGG | 2 cut(s) | 80, 1670 |
| BslFI | GGGAC | 1 cut(s) | 3671 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 1669, 2556, 2921, 3106, 3107, 3383, 3384, 3655 |
| BsmAI | GTCTC | 4 cut(s) | 1454, 2391, 2492, 3814 |
| BsmBI | CGTCTC | 1 cut(s) | 3814 |
| BsmFI | GGGAC | 1 cut(s) | 3671 |
| BsmI | GAATGC | 3 cut(s) | 199, 1955, 3142 |
| BsnI | GGCC | 8 cut(s) | 23, 412, 432, 1505, 1669, 1871, 3663, 3842 |
| BsoBI | CYCGRG | 3 cut(s) | 50, 413, 3539 |
| Bsp119I | TTCGAA | 1 cut(s) | 3407 |
| Bsp1286I | GDGCHC | 5 cut(s) | 2824, 3224, 3564, 3638, 3778 |
| Bsp1407I | TGTACA | 3 cut(s) | 565, 834, 3279 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 1829, 2052, 2328 |
| Bsp19I | CCATGG | 1 cut(s) | 2446 |
| Bsp68I | TCGCGA | 1 cut(s) | 1017 |
| BspANI | GGCC | 8 cut(s) | 23, 412, 432, 1505, 1669, 1871, 3663, 3842 |
| BspFNI | CGCG | 3 cut(s) | 672, 1017, 1074 |
| BspHI | TCATGA | 2 cut(s) | 1000, 3484 |
| BspLI | GGNNCC | 7 cut(s) | 1066, 1553, 1618, 2637, 2862, 3221, 3775 |
| BspMAI | CTGCAG | 3 cut(s) | 391, 2883, 3271 |
| BspMI | ACCTGC | 1 cut(s) | 1991 |
| BspT104I | TTCGAA | 1 cut(s) | 3407 |
| BspT107I | GGYRCC | 2 cut(s) | 3219, 3773 |
| BsrBI | CCGCTC | 2 cut(s) | 760, 2332 |
| BsrDI | GCAATG | 3 cut(s) | 24, 2801, 2888 |
| BsrFI | RCCGGY | 1 cut(s) | 1669 |
| BsrGI | TGTACA | 3 cut(s) | 565, 834, 3279 |
| BsrI | ACTGG | 9 cut(s) | 122, 884, 1166, 1383, 1589, 1728, 2067, 2862, 3304 |
| BssAI | RCCGGY | 1 cut(s) | 1669 |
| BssECI | CCNNGG | 8 cut(s) | 1664, 1961, 2446, 2807, 3101, 3214, 3215, 3649 |
| BssSI | CACGAG | 1 cut(s) | 1926 |
| BssT1I | CCWWGG | 3 cut(s) | 1664, 2446, 3101 |
| Bst2BI | CACGAG | 1 cut(s) | 1926 |
| Bst2UI | CCWGG | 8 cut(s) | 1481, 1752, 1963, 2809, 3120, 3216, 3581, 3650 |
| Bst4CI | ACNGT | 9 cut(s) | 439, 570, 1148, 1806, 1867, 2736, 2744, 3431, 3808 |
| Bst6I | CTCTTC | 1 cut(s) | 12 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 3266, 3550 |
| BstAUI | TGTACA | 3 cut(s) | 565, 834, 3279 |
| BstBAI | YACGTR | 3 cut(s) | 353, 1981, 3706 |
| BstBI | TTCGAA | 1 cut(s) | 3407 |
| BstC8I | GCNNGC | 9 cut(s) | 63, 372, 514, 1237, 1703, 2058, 2442, 3113, 3734 |
| BstDSI | CCRYGG | 1 cut(s) | 2446 |
| BstFNI | CGCG | 3 cut(s) | 672, 1017, 1074 |
| BstH2I | RGCGCY | 1 cut(s) | 3372 |
| BstHHI | GCGC | 3 cut(s) | 110, 1076, 3371 |
| BstMAI | GTCTC | 4 cut(s) | 1454, 2391, 2492, 3814 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 29, 386, 429, 1682, 1756, 2057, 3266, 3550, 3559 |
| BstNI | CCWGG | 8 cut(s) | 1481, 1752, 1963, 2809, 3120, 3216, 3581, 3650 |
| BstNSI | RCATGY | 2 cut(s) | 659, 2444 |
| BstSCI | CCNGG | 9 cut(s) | 79, 1479, 1750, 1961, 2807, 3118, 3214, 3579, 3648 |
| BstSFI | CTRYAG | 5 cut(s) | 387, 435, 2879, 3267, 3504 |
| BstSLI | GKGCMC | 2 cut(s) | 3224, 3778 |
| BstUI | CGCG | 3 cut(s) | 672, 1017, 1074 |
| BstV1I | GCAGC | 9 cut(s) | 373, 910, 1440, 1672, 2192, 2726, 3253, 3506, 3537 |
| BstV2I | GAAGAC | 6 cut(s) | 174, 971, 980, 1914, 3428, 3747 |
| BstX2I | RGATCY | 8 cut(s) | 904, 1064, 1551, 1616, 1775, 1882, 2464, 3271 |
| BstYI | RGATCY | 8 cut(s) | 904, 1064, 1551, 1616, 1775, 1882, 2464, 3271 |
| BsuRI | GGCC | 8 cut(s) | 23, 412, 432, 1505, 1669, 1871, 3663, 3842 |
| BtgI | CCRYGG | 1 cut(s) | 2446 |
| BtgZI | GCGATG | 2 cut(s) | 150, 379 |
| BtsI | GCAGTG | 2 cut(s) | 1430, 1696 |
| BtuMI | TCGCGA | 1 cut(s) | 1017 |
| BveI | ACCTGC | 1 cut(s) | 1991 |
| Cac8I | GCNNGC | 9 cut(s) | 63, 372, 514, 1237, 1703, 2058, 2442, 3113, 3734 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3266 |
| CciI | TCATGA | 2 cut(s) | 1000, 3484 |
| CfoI | GCGC | 3 cut(s) | 110, 1076, 3371 |
| Cfr10I | RCCGGY | 1 cut(s) | 1669 |
| Cfr13I | GGNCC | 9 cut(s) | 77, 411, 431, 453, 1477, 1540, 1693, 2113, 3583 |
| CseI | GACGC | 2 cut(s) | 363, 429 |
| CsiI | ACCWGGT | 1 cut(s) | 3579 |
| Csp6I | GTAC | 6 cut(s) | 566, 835, 1343, 2697, 3280, 3470 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3751, 3786 |
| CviQI | GTAC | 6 cut(s) | 566, 835, 1343, 2697, 3280, 3470 |
| DraI | TTTAAA | 1 cut(s) | 3184 |
| DraIII | CACNNNGTG | 1 cut(s) | 633 |
| EaeI | YGGCCR | 2 cut(s) | 1503, 1869 |
| Eam1104I | CTCTTC | 1 cut(s) | 12 |
| EarI | CTCTTC | 1 cut(s) | 12 |
| Ecl136II | GAGCTC | 1 cut(s) | 3562 |
| Eco130I | CCWWGG | 3 cut(s) | 1664, 2446, 3101 |
| Eco147I | AGGCCT | 1 cut(s) | 3842 |
| Eco24I | GRGCYC | 2 cut(s) | 3564, 3638 |
| Eco32I | GATATC | 3 cut(s) | 691, 2431, 3055 |
| Eco47I | GGWCC | 7 cut(s) | 77, 453, 1477, 1540, 1693, 2113, 3583 |
| Eco47III | AGCGCT | 1 cut(s) | 3370 |
| Eco53kI | GAGCTC | 1 cut(s) | 3562 |
| Eco57I | CTGAAG | 3 cut(s) | 482, 1154, 1296 |
| Eco72I | CACGTG | 1 cut(s) | 3706 |
| Eco88I | CYCGRG | 3 cut(s) | 50, 413, 3539 |
| EcoICRI | GAGCTC | 1 cut(s) | 3562 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1540, 3583 |
| EcoRII | CCWGG | 8 cut(s) | 1479, 1750, 1961, 2807, 3118, 3214, 3579, 3648 |
| EcoRV | GATATC | 3 cut(s) | 691, 2431, 3055 |
| EcoT14I | CCWWGG | 3 cut(s) | 1664, 2446, 3101 |
| EcoT38I | GRGCYC | 2 cut(s) | 3564, 3638 |
| ErhI | CCWWGG | 3 cut(s) | 1664, 2446, 3101 |
| Esp3I | CGTCTC | 1 cut(s) | 3814 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 678, 710, 1817, 1849, 2946, 2978 |
| FaqI | GGGAC | 1 cut(s) | 3671 |
| FauI | CCCGC | 1 cut(s) | 3741 |
| FauNDI | CATATG | 1 cut(s) | 1845 |
| FbaI | TGATCA | 2 cut(s) | 490, 861 |
| FblI | GTMKAC | 2 cut(s) | 349, 2539 |
| FriOI | GRGCYC | 2 cut(s) | 3564, 3638 |
| FspBI | CTAG | 9 cut(s) | 311, 383, 408, 1548, 2009, 2796, 2828, 3333, 3452 |
| GlaI | GCGC | 3 cut(s) | 109, 1075, 3370 |
| GsaI | CCCAGC | 4 cut(s) | 2179, 2614, 3044, 3497 |
| GsuI | CTGGAG | 2 cut(s) | 903, 1773 |
| HaeII | RGCGCY | 1 cut(s) | 3372 |
| HaeIII | GGCC | 8 cut(s) | 23, 412, 432, 1505, 1669, 1871, 3663, 3842 |
| HapII | CCGG | 2 cut(s) | 80, 1670 |
| HgaI | GACGC | 2 cut(s) | 363, 429 |
| HhaI | GCGC | 3 cut(s) | 110, 1076, 3371 |
| Hin6I | GCGC | 3 cut(s) | 108, 1074, 3369 |
| HinP1I | GCGC | 3 cut(s) | 108, 1074, 3369 |
| HincII | GTYRAC | 4 cut(s) | 1140, 1878, 2540, 3175 |
| HindII | GTYRAC | 4 cut(s) | 1140, 1878, 2540, 3175 |
| HindIII | AAGCTT | 2 cut(s) | 1826, 2141 |
| HpaII | CCGG | 2 cut(s) | 80, 1670 |
| HphI | GGTGA | 3 cut(s) | 987, 1646, 3509 |
| Hpy99I | CGWCG | 1 cut(s) | 423 |
| HpyAV | CCTTC | 8 cut(s) | 208, 704, 1171, 1199, 1302, 1534, 3247, 3403 |
| HpyCH4III | ACNGT | 9 cut(s) | 439, 570, 1148, 1806, 1867, 2736, 2744, 3431, 3808 |
| HpyCH4IV | ACGT | 6 cut(s) | 352, 681, 1874, 1980, 2201, 3705 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 29, 386, 429, 1682, 1756, 2057, 3266, 3550, 3559 |
| HpySE526I | ACGT | 6 cut(s) | 352, 681, 1874, 1980, 2201, 3705 |
| HspAI | GCGC | 3 cut(s) | 108, 1074, 3369 |
| Ksp22I | TGATCA | 2 cut(s) | 490, 861 |
| LmnI | GCTCC | 1 cut(s) | 3366 |
| Lsp1109I | GCAGC | 9 cut(s) | 373, 910, 1440, 1672, 2192, 2726, 3253, 3506, 3537 |
| MabI | ACCWGGT | 1 cut(s) | 3579 |
| MaeI | CTAG | 9 cut(s) | 311, 383, 408, 1548, 2009, 2796, 2828, 3333, 3452 |
| MaeII | ACGT | 6 cut(s) | 352, 681, 1874, 1980, 2201, 3705 |
| MaeIII | GTNAC | 4 cut(s) | 439, 1861, 1989, 2929 |
| MbiI | CCGCTC | 2 cut(s) | 760, 2332 |
| MfeI | CAATTG | 1 cut(s) | 2775 |
| MflI | RGATCY | 8 cut(s) | 904, 1064, 1551, 1616, 1775, 1882, 2464, 3271 |
| MhlI | GDGCHC | 5 cut(s) | 2824, 3224, 3564, 3638, 3778 |
| MlsI | TGGCCA | 2 cut(s) | 1505, 1871 |
| MluNI | TGGCCA | 2 cut(s) | 1505, 1871 |
| MmeI | TCCRAC | 2 cut(s) | 1788, 1830 |
| Mox20I | TGGCCA | 2 cut(s) | 1505, 1871 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1209, 3000, 3413 |
| MscI | TGGCCA | 2 cut(s) | 1505, 1871 |
| MseI | TTAA | 9 cut(s) | 426, 873, 1220, 1791, 2708, 2952, 2964, 3183, 3719 |
| MslI | CAYNNNNRTG | 2 cut(s) | 479, 2445 |
| Msp20I | TGGCCA | 2 cut(s) | 1505, 1871 |
| MspA1I | CMGCKG | 4 cut(s) | 190, 923, 1685, 3550 |
| MspI | CCGG | 2 cut(s) | 80, 1670 |
| MspR9I | CCNGG | 9 cut(s) | 81, 1481, 1752, 1963, 2809, 3120, 3216, 3581, 3650 |
| MunI | CAATTG | 1 cut(s) | 2775 |
| Mva1269I | GAATGC | 3 cut(s) | 199, 1955, 3142 |
| MvaI | CCWGG | 8 cut(s) | 1481, 1752, 1963, 2809, 3120, 3216, 3581, 3650 |
| MvnI | CGCG | 3 cut(s) | 672, 1017, 1074 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 29, 386, 429, 1682, 1756, 2057, 3266, 3550, 3559 |
| NciI | CCSGG | 1 cut(s) | 81 |
| NcoI | CCATGG | 1 cut(s) | 2446 |
| NdeI | CATATG | 1 cut(s) | 1845 |
| NlaIV | GGNNCC | 7 cut(s) | 1066, 1553, 1618, 2637, 2862, 3221, 3775 |
| NmuCI | GTSAC | 3 cut(s) | 1861, 1989, 2929 |
| NruI | TCGCGA | 1 cut(s) | 1017 |
| NspI | RCATGY | 2 cut(s) | 659, 2444 |
| NspV | TTCGAA | 1 cut(s) | 3407 |
| OliI | CACNNNNGTG | 1 cut(s) | 479 |
| PaeI | GCATGC | 1 cut(s) | 2444 |
| PaeR7I | CTCGAG | 1 cut(s) | 50 |
| PagI | TCATGA | 2 cut(s) | 1000, 3484 |
| PasI | CCCWGGG | 1 cut(s) | 3215 |
| PceI | AGGCCT | 1 cut(s) | 3842 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3804 |
| PctI | GAATGC | 3 cut(s) | 199, 1955, 3142 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1209, 3000, 3413 |
| PfeI | GAWTC | 8 cut(s) | 278, 584, 1117, 1783, 2045, 2082, 3458, 3500 |
| PfoI | TCCNGGA | 1 cut(s) | 1479 |
| PmaCI | CACGTG | 1 cut(s) | 3706 |
| PmlI | CACGTG | 1 cut(s) | 3706 |
| Ppu21I | YACGTR | 3 cut(s) | 353, 1981, 3706 |
| PpuMI | RGGWCCY | 2 cut(s) | 1540, 3583 |
| PshBI | ATTAAT | 1 cut(s) | 426 |
| Psp124BI | GAGCTC | 1 cut(s) | 3564 |
| Psp5II | RGGWCCY | 2 cut(s) | 1540, 3583 |
| Psp6I | CCWGG | 8 cut(s) | 1479, 1750, 1961, 2807, 3118, 3214, 3579, 3648 |
| PspCI | CACGTG | 1 cut(s) | 3706 |
| PspFI | CCCAGC | 4 cut(s) | 2175, 2610, 3040, 3493 |
| PspGI | CCWGG | 8 cut(s) | 1479, 1750, 1961, 2807, 3118, 3214, 3579, 3648 |
| PspN4I | GGNNCC | 7 cut(s) | 1066, 1553, 1618, 2637, 2862, 3221, 3775 |
| PspPI | GGNCC | 9 cut(s) | 77, 411, 431, 453, 1477, 1540, 1693, 2113, 3583 |
| PspPPI | RGGWCCY | 2 cut(s) | 1540, 3583 |
| PspXI | VCTCGAGB | 1 cut(s) | 50 |
| PstI | CTGCAG | 3 cut(s) | 391, 2883, 3271 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3266 |
| PsuI | RGATCY | 8 cut(s) | 904, 1064, 1551, 1616, 1775, 1882, 2464, 3271 |
| PvuII | CAGCTG | 4 cut(s) | 190, 923, 1685, 3550 |
| RruI | TCGCGA | 1 cut(s) | 1017 |
| RsaI | GTAC | 6 cut(s) | 567, 836, 1344, 2698, 3281, 3471 |
| RsaNI | GTAC | 6 cut(s) | 566, 835, 1343, 2697, 3280, 3470 |
| RseI | CAYNNNNRTG | 2 cut(s) | 479, 2445 |
| SacI | GAGCTC | 1 cut(s) | 3564 |
| SalI | GTCGAC | 1 cut(s) | 2538 |
| SaqAI | TTAA | 9 cut(s) | 426, 873, 1220, 1791, 2708, 2952, 2964, 3183, 3719 |
| Sau96I | GGNCC | 9 cut(s) | 77, 411, 431, 453, 1477, 1540, 1693, 2113, 3583 |
| ScrFI | CCNGG | 9 cut(s) | 81, 1481, 1752, 1963, 2809, 3120, 3216, 3581, 3650 |
| SduI | GDGCHC | 5 cut(s) | 2824, 3224, 3564, 3638, 3778 |
| SexAI | ACCWGGT | 1 cut(s) | 3579 |
| SfcI | CTRYAG | 5 cut(s) | 387, 435, 2879, 3267, 3504 |
| Sfr274I | CTCGAG | 1 cut(s) | 50 |
| SfuI | TTCGAA | 1 cut(s) | 3407 |
| SinI | GGWCC | 7 cut(s) | 77, 453, 1477, 1540, 1693, 2113, 3583 |
| SlaI | CTCGAG | 1 cut(s) | 50 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 479, 2445 |
| SmlI | CTYRAG | 5 cut(s) | 50, 1985, 2072, 2700, 3147 |
| SmoI | CTYRAG | 5 cut(s) | 50, 1985, 2072, 2700, 3147 |
| SpeI | ACTAGT | 1 cut(s) | 3332 |
| SphI | GCATGC | 1 cut(s) | 2444 |
| SseBI | AGGCCT | 1 cut(s) | 3842 |
| SspI | AATATT | 3 cut(s) | 2237, 3138, 3353 |
| SspMI | CTAG | 9 cut(s) | 311, 383, 408, 1548, 2009, 2796, 2828, 3333, 3452 |
| SstI | GAGCTC | 1 cut(s) | 3564 |
| StuI | AGGCCT | 1 cut(s) | 3842 |
| StyD4I | CCNGG | 9 cut(s) | 79, 1479, 1750, 1961, 2807, 3118, 3214, 3579, 3648 |
| StyI | CCWWGG | 3 cut(s) | 1664, 2446, 3101 |
| TaaI | ACNGT | 9 cut(s) | 439, 570, 1148, 1806, 1867, 2736, 2744, 3431, 3808 |
| TaiI | ACGT | 6 cut(s) | 355, 684, 1877, 1983, 2204, 3708 |
| TaqI | TCGA | 9 cut(s) | 51, 587, 2244, 2361, 2539, 2818, 3407, 3466, 3798 |
| TatI | WGTACW | 3 cut(s) | 565, 834, 3279 |
| TauI | GCSGC | 4 cut(s) | 32, 108, 763, 3341 |
| TfiI | GAWTC | 8 cut(s) | 278, 584, 1117, 1783, 2045, 2082, 3458, 3500 |
| Tru1I | TTAA | 9 cut(s) | 426, 873, 1220, 1791, 2708, 2952, 2964, 3183, 3719 |
| Tru9I | TTAA | 9 cut(s) | 426, 873, 1220, 1791, 2708, 2952, 2964, 3183, 3719 |
| TseFI | GTSAC | 3 cut(s) | 1861, 1989, 2929 |
| TseI | GCWGC | 9 cut(s) | 386, 923, 1428, 1685, 2180, 2714, 3266, 3519, 3550 |
| Tsp45I | GTSAC | 3 cut(s) | 1861, 1989, 2929 |
| TspGWI | ACGGA | 1 cut(s) | 2241 |
| VpaK11BI | GGWCC | 7 cut(s) | 77, 453, 1477, 1540, 1693, 2113, 3583 |
| VspI | ATTAAT | 1 cut(s) | 426 |
| XapI | RAATTY | 5 cut(s) | 84, 649, 1907, 2587, 3441 |
| XbaI | TCTAGA | 5 cut(s) | 310, 2008, 2795, 2827, 3451 |
| XceI | RCATGY | 2 cut(s) | 659, 2444 |
| XhoI | CTCGAG | 1 cut(s) | 50 |
| XmiI | GTMKAC | 2 cut(s) | 349, 2539 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1209, 3000, 3413 |
| XspI | CTAG | 9 cut(s) | 311, 383, 408, 1548, 2009, 2796, 2828, 3333, 3452 |