Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0010880

Physical Location & Seq

Genomic Coordinates Forward (+)

32184567 .. 32190732

Gene Structure 6166 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1252900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2556 bp

ATGATTCTATCTCCTACCCTCTTGACATCTACAACATCTTGTACCAAGGTGGTACGATATAACTATAGTGCAGAGGAAAGGAAAGCACTGGTTGAACTTGTTGGTTACATAAAGAGCATTGGGTCACTGATGCAGCGCAACGACACTTTGGTAGCTGATGCTTTATGGGAGACAATTCATGCAGAGGTCCAGGATTTTGTTCAGAATACATTGGCCACTATGTTGAGGACTACCTTCCGAAAGAAGAAGGACCTATCCAGGATCCTTTCTGATATGCGGACTCTTTCAGCAGACTGGATGGCAAATACTAGCAAGTCTGAGTCTGGATCCCTACAACAAGGGGGTGATGAAAGCAAAGGAAACTTTTTTTATCCAAGGCCGGTTGCACCAACAGCTGCTCAGGCTCACTGCTTGCAGTTCCTGATATATGAGGCAGTATCTGGTGGTAATCTTAGGAAGCCTGGAGGACTCTTTGGGAATAGTGGGTCTGAGATTCCTGTTAATGATCTAAAACAGTTGGAAACATTCTTTTACAAGCTCAGATTCTTCCTGCATATATTGGACTACTCAGTGACTGTGGCAACTTTGACGGATCTTGGTTTCTTGTGGTTTAGAGAATTTTATTTGGAATCTTCTCGTGTTATTCAGTTTCCCATTGAGTGTTCTCTACCCTGGATGTTGGTGGATTACATGCTGGAGTCGCAGAATGCGGGCATCCTAGAAAGTGTGTTGATGCCATTTGACATCTATAATGATTCAGCTCAGCAAGCACTGGTTTTGCTCAAGCAACGGTTCCTCTATGATGAAATTGAGGCTGAGGTGGACCATTGTTTTGATATATTTGTTTCAAAGCTTTGTGATAGTATTTTCACTTATTACAAGAGCTGGGCAGCAAGTGAGCTACTTGATACTTCATTCCTCTTCGCATTGGACAATGGAGAAAAATATTCAGTCGAGCCTATGAGGTTCACTGCCCTACTGAAGATGACCAGAGTTAAGTTGCTTGGGAGGATGATTGATTTGAGAAGTTTGATTGCTGACCGGATGAACAAAGTTTTCAGAGATAATATCGAGTTTCTATTTGATCGTTTTGAGTCTCAGGATCTATGCGCTATTGTGGAATTAGAAAATCTGTTGGATATCTTAAAACATGCCCATGGGTTGCTATCCAGAGATATCTCAATAGACTCGTTCAGTATCATGTTGAATGAGATGCAAGAAAACATATCGCTTGTGTCATACTGTAGTCGACTTGCTTCCCAGATTTGGTCAGAGATGCAAAATGATTTCTTGCCAAACTTCATCCTTTGCAATACTACCCAGCGTTTCACCCGATCATCAAAGGTGCCTCTTGTACCTATTCAAAAGCCATCGGTTCCCTCTGCCAAGCCTAATTTCTATTGTGGTACTAAAGACTTAAATGCAGCTCATCAGAGTTTTGCACGGTTGCACGGTGGATTTTTTGGGATGCCCCACATGTTTTCAATTGTTAGGCTTCTAGGGTCTAGATCATTGCCTTGGCTAATTCGAGCACTTCTAGATCATGTGTCAAACAAGATAGCTGCGGTGGAACCAATGATAACAGGACTACAAGAAGCTTTGCCGAAGTCTATTGGATTGCTTCCGTTTGATGGAGGCGTGACAGGTTGTATGAGGCTTGTTAAAGAACAACTTAGTTGGGGAACCAAATCACAGCTCAAAACCGAAGTTCTTCGAGGGATAAAGGAGATTGGAAGTGTGTTATATTGGTTGGGGCTTCTTGATATCGTGTTGAGAGAAACAGATACGACACATTTCATGCAAACAGCCCCTTGGTTGGGCTTGCTTCCTGGCGCAGATGGACAAATACTGCATTCTCAAGATGGCGGAGAAAGCCCTATTGTCAACCTCTTCAAATCAGCTACTTCTGCAATTGTGTCAAATCCTGGGTGCCGAAATCCGACTTCCTTCCATACCTTATCAAAACAGGCGGAAGCTGCAGATCTGTTGTACAAGGCTAACATGAATACTGGAAGTGTGCTGGAATACGCCCTAGCATTTACTAGTGCGGCTCTGGACAAATATTGTAGCAAATGGAGTGCTGTTCCAAAAACAGGGTTCATCGACATCACAACGTCAAAGGATTTCTATCGTATATACAGTGGTCTTCAAATTTGGTACCTAGAGGAGTCTGTTCGAGTAACACCAAGCAGTCATGAAGTGCTGGGTGATTCAATAGCTTGGGGTGGTTGCACCATAATATACTTGCTTGGGCAACAGCTACATTTTGAGCTCTTGGATTTTTCACATCAGGTCCTCAACGTTGCCGAAGTGGAGTCTGCATCGATCAGCCAAGCCCACAAGAGTCCTCATTTTGTCCAGGGATGGGACGGTCTGTTAGAAGTAATGAAGAAAGCAAGGAGGCTAAACAATCATGTGTTCAGCATGCTAAAGGCGCGCTGCCCTCTCGAAGACAAGACGGCTTGCGCTATCAAGCAAAGCGGTGCCCCTCTGCATCGGGTCAAGTTCGAGAACACCGTCTCTGCGTTTGAAACTCTTCCGCAGAAAGAGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008150 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010638 GO:0016043 GO:0030029 GO:0030036 GO:0030154 GO:0030832 GO:0030833 GO:0030838 GO:0031209 GO:0031334 GO:0032271 GO:0032273 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0032989 GO:0032991 GO:0033043 GO:0043254 GO:0044087 GO:0044089 GO:0044424 GO:0044444 GO:0044464 GO:0045010 GO:0048468 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0090558 GO:0090626 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko03013 ko04810 map03013 map04810

Pfam Domains

Protein Families

DUF1394 FragX_IP

Protein Analysis

852

Amino Acids

95.71

Weight (kDa)

6.16

Isoelectric Point (pI)

41.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FragX_IP	PF05994	16 - 812	4.8e-294	Cytoplasmic Fragile-X interacting family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010880)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18410 AT5G18410 AT5G18410
fragaria_vesca	FvH4_6g01330 FvH4_6g01330 FvH4_6g01330
malus_domestica	MD12G1252900.v1.1
prunus_persica	Prupe.6G354800_v2.0.a1
pyrus_communis	pycom12g23200
rosa_chinensis	RchiOBHm_Chr3g0448901
rosa_laevigata	RLG00000025868
rosa_multiflora	Rmu_sc0003116.1_g000019
rosa_roxburghii	Rroxscaffold_6G00427090
rosa_rugosa	Rorug02G0617100 Rorug02G0617100
rosa_samantha	Rh3AG015400 Rh3BG015200 Rh3CG014100 Rh3DG015700
rosa_wichuraiana	Rw3G001140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2157
AccB1I	GGYRCC	4 cut(s)	1345, 1929, 2157, 2483
AccI	GTMKAC	1 cut(s)	1249
AccII	CGCG	1 cut(s)	2437
AciI	CCGC	8 cut(s)	277, 710, 1565, 1866, 1970, 2048, 2481, 2540
AclI	AACGTT	1 cut(s)	2301
AclWI	GGATC	6 cut(s)	256, 269, 321, 334, 600, 1110
AcoI	YGGCCR	1 cut(s)	213
AcsI	RAATTY	2 cut(s)	617, 2151
AcuI	CTGAAG	1 cut(s)	1001
AfaI	GTAC	6 cut(s)	43, 54, 1356, 1408, 1991, 2159
AfiI	CCNNNNNNNGG	6 cut(s)	1266, 1631, 1816, 1817, 2093, 2365
AflIII	ACRYGT	1 cut(s)	1476
AgsI	TTSAA	9 cut(s)	95, 849, 1207, 1364, 1485, 1894, 2150, 2214, 2531
AhlI	ACTAGT	1 cut(s)	2042
AjnI	CCWGG	7 cut(s)	189, 257, 460, 671, 1828, 1924, 2358
AjuI	GAANNNNNNNTTGG	2 cut(s)	1379, 1411
Alw21I	GWGCWC	2 cut(s)	1534, 2274
Alw26I	GTCTC	3 cut(s)	164, 1101, 2524
AlwI	GGATC	6 cut(s)	256, 269, 321, 334, 600, 1110
AlwNI	CAGNNNCTG	3 cut(s)	421, 440, 575
AoxI	GGCC	3 cut(s)	213, 377, 2550
ApeKI	GCWGC	7 cut(s)	133, 395, 890, 1424, 1562, 1976, 2439
ApoI	RAATTY	2 cut(s)	617, 2151
ArsI	GACNNNNNNTTYG	2 cut(s)	815, 847
Asp700I	GAANNNNTTC	2 cut(s)	1710, 2535
Asp718I	GGTACC	1 cut(s)	2157
AspLEI	GCGC	6 cut(s)	138, 1112, 1835, 2437, 2439, 2468
AspS9I	GGNCC	4 cut(s)	187, 250, 823, 2293
AsuHPI	GGTGA	3 cut(s)	356, 1321, 2219
AvaII	GGWCC	4 cut(s)	187, 250, 823, 2293
BaeGI	GKGCMC	1 cut(s)	2488
BalI	TGGCCA	1 cut(s)	215
BamHI	GGATCC	2 cut(s)	261, 326
BanI	GGYRCC	4 cut(s)	1345, 1929, 2157, 2483
BanII	GRGCYC	1 cut(s)	2274
BauI	CACGAG	1 cut(s)	636
BbsI	GAAGAC	2 cut(s)	2138, 2457
Bbv12I	GWGCWC	2 cut(s)	1534, 2274
BbvCI	CCTCAGC	1 cut(s)	816
BbvI	GCAGC	7 cut(s)	145, 382, 902, 1436, 1549, 1963, 2426
BccI	CCATC	6 cut(s)	292, 1378, 1625, 1832, 1856, 2358
BceAI	ACGGC	1 cut(s)	2475
BciT130I	CCWGG	7 cut(s)	191, 259, 462, 673, 1830, 1926, 2360
BcoDI	GTCTC	3 cut(s)	164, 1101, 2524
BcuI	ACTAGT	1 cut(s)	2042
BfaI	CTAG	8 cut(s)	309, 719, 1499, 1506, 1538, 2033, 2043, 2162
BfmI	CTRYAG	3 cut(s)	64, 1243, 1977
BglII	AGATCT	1 cut(s)	1981
BisI	GCNGC	8 cut(s)	134, 396, 891, 1425, 1563, 1977, 2049, 2440
BlpI	GCTNAGC	1 cut(s)	762
BlsI	GCNGC	8 cut(s)	135, 397, 892, 1426, 1564, 1978, 2050, 2441
Bme1390I	CCNGG	7 cut(s)	191, 259, 462, 673, 1830, 1926, 2360
Bme18I	GGWCC	4 cut(s)	187, 250, 823, 2293
BmgT120I	GGNCC	4 cut(s)	187, 250, 823, 2293
BmrFI	CCNGG	7 cut(s)	191, 259, 462, 673, 1830, 1926, 2360
BmsI	GCATC	9 cut(s)	120, 148, 723, 723, 1203, 1266, 1458, 2330, 2503
BpiI	GAAGAC	2 cut(s)	2138, 2457
BpmI	CTGGAG	2 cut(s)	483, 716
Bpu10I	CCTNAGC	2 cut(s)	399, 816
Bpu1102I	GCTNAGC	1 cut(s)	762
BpuEI	CTTGAG	2 cut(s)	767, 1842
Bsa29I	ATCGAT	1 cut(s)	2324
BsaBI	GATNNNNATC	1 cut(s)	2127
BsaJI	CCNNGG	8 cut(s)	45, 374, 671, 1156, 1517, 1811, 1925, 2359
BsaWI	WCCGGW	1 cut(s)	1041
Bsc4I	CCNNNNNNNGG	6 cut(s)	1266, 1631, 1816, 1817, 2093, 2365
Bse118I	RCCGGY	1 cut(s)	379
Bse1I	ACTGG	4 cut(s)	93, 299, 777, 2014
Bse3DI	GCAATG	1 cut(s)	1511
Bse8I	GATNNNNATC	1 cut(s)	2127
BseBI	CCWGG	7 cut(s)	191, 259, 462, 673, 1830, 1926, 2360
BseCI	ATCGAT	1 cut(s)	2324
BseDI	CCNNGG	8 cut(s)	45, 374, 671, 1156, 1517, 1811, 1925, 2359
BseGI	GGATG	8 cut(s)	303, 681, 714, 1017, 1050, 1302, 1473, 2369
BseJI	GATNNNNATC	1 cut(s)	2127
BseLI	CCNNNNNNNGG	6 cut(s)	1266, 1631, 1816, 1817, 2093, 2365
BseMI	GCAATG	1 cut(s)	1511
BseMII	CTCAG	8 cut(s)	309, 413, 480, 553, 582, 776, 807, 1112
BseNI	ACTGG	4 cut(s)	93, 299, 777, 2014
BsePI	GCGCGC	1 cut(s)	2435
BseRI	GAGGAG	1 cut(s)	2180
BseSI	GKGCMC	1 cut(s)	2488
BseXI	GCAGC	7 cut(s)	145, 382, 902, 1436, 1549, 1963, 2426
BseYI	CCCAGC	3 cut(s)	885, 1320, 2203
BsgI	GTGCAG	1 cut(s)	90
Bsh1236I	CGCG	1 cut(s)	2437
BshFI	GGCC	3 cut(s)	215, 379, 2552
BshNI	GGYRCC	4 cut(s)	1345, 1929, 2157, 2483
BshVI	ATCGAT	1 cut(s)	2324
BsiHKAI	GWGCWC	2 cut(s)	1534, 2274
BsiSI	CCGG	2 cut(s)	380, 1042
BslFI	GGGAC	1 cut(s)	2381
BslI	CCNNNNNNNGG	6 cut(s)	1266, 1631, 1816, 1817, 2093, 2365
BsmAI	GTCTC	3 cut(s)	164, 1101, 2524
BsmBI	CGTCTC	1 cut(s)	2524
BsmFI	GGGAC	1 cut(s)	2381
BsmI	GAATGC	2 cut(s)	712, 1852
BsnI	GGCC	3 cut(s)	215, 379, 2552
Bsp1286I	GDGCHC	3 cut(s)	1534, 2274, 2488
Bsp1407I	TGTACA	1 cut(s)	1989
Bsp1720I	GCTNAGC	1 cut(s)	762
Bsp19I	CCATGG	1 cut(s)	1156
BspACI	CCGC	8 cut(s)	277, 710, 1565, 1866, 1970, 2048, 2481, 2540
BspANI	GGCC	3 cut(s)	215, 379, 2552
BspCNI	CTCAG	8 cut(s)	310, 412, 481, 552, 581, 775, 808, 1111
BspDI	ATCGAT	1 cut(s)	2324
BspFNI	CGCG	1 cut(s)	2437
BspHI	TCATGA	1 cut(s)	2194
BspMAI	CTGCAG	1 cut(s)	1981
BspPI	GGATC	6 cut(s)	256, 269, 321, 334, 600, 1110
BspT107I	GGYRCC	4 cut(s)	1345, 1929, 2157, 2483
BsrDI	GCAATG	1 cut(s)	1511
BsrFI	RCCGGY	1 cut(s)	379
BsrGI	TGTACA	1 cut(s)	1989
BsrI	ACTGG	4 cut(s)	93, 299, 777, 2014
BssAI	RCCGGY	1 cut(s)	379
BssECI	CCNNGG	8 cut(s)	45, 374, 671, 1156, 1517, 1811, 1925, 2359
BssHII	GCGCGC	1 cut(s)	2435
BssSI	CACGAG	1 cut(s)	636
BssT1I	CCWWGG	5 cut(s)	45, 374, 1156, 1517, 1811
Bst2BI	CACGAG	1 cut(s)	636
Bst2UI	CCWGG	7 cut(s)	191, 259, 462, 673, 1830, 1926, 2360
Bst4CI	ACNGT	9 cut(s)	516, 577, 792, 1244, 1446, 1454, 2141, 2372, 2518
Bst6I	CTCTTC	3 cut(s)	926, 1895, 2541
BstAUI	TGTACA	1 cut(s)	1989
BstC8I	GCNNGC	7 cut(s)	413, 712, 768, 1823, 2426, 2437, 2464
BstDSI	CCRYGG	1 cut(s)	1156
BstF5I	GGATG	8 cut(s)	303, 681, 714, 1017, 1050, 1302, 1473, 2369
BstFNI	CGCG	1 cut(s)	2437
BstHHI	GCGC	6 cut(s)	138, 1112, 1835, 2437, 2439, 2468
BstMAI	GTCTC	3 cut(s)	164, 1101, 2524
BstMWI	GCNNNNNNNGC	8 cut(s)	392, 401, 700, 767, 1872, 1907, 1976, 2434
BstNI	CCWGG	7 cut(s)	191, 259, 462, 673, 1830, 1926, 2360
BstNSI	RCATGY	4 cut(s)	694, 1154, 1480, 2428
BstSCI	CCNGG	7 cut(s)	189, 257, 460, 671, 1828, 1924, 2358
BstSFI	CTRYAG	3 cut(s)	64, 1243, 1977
BstSLI	GKGCMC	1 cut(s)	2488
BstUI	CGCG	1 cut(s)	2437
BstV1I	GCAGC	7 cut(s)	145, 382, 902, 1436, 1549, 1963, 2426
BstV2I	GAAGAC	2 cut(s)	2138, 2457
BstX2I	RGATCY	5 cut(s)	261, 326, 592, 1102, 1981
BstYI	RGATCY	5 cut(s)	261, 326, 592, 1102, 1981
Bsu15I	ATCGAT	1 cut(s)	2324
BsuRI	GGCC	3 cut(s)	215, 379, 2552
BsuTUI	ATCGAT	1 cut(s)	2324
BtgI	CCRYGG	1 cut(s)	1156
BtsCI	GGATG	8 cut(s)	303, 681, 714, 1017, 1050, 1302, 1473, 2369
BtsI	GCAGTG	2 cut(s)	406, 969
BtsIMutI	CAGTG	7 cut(s)	86, 125, 406, 576, 770, 969, 2146
Cac8I	GCNNGC	7 cut(s)	413, 712, 768, 1823, 2426, 2437, 2464
CaiI	CAGNNNCTG	3 cut(s)	421, 440, 575
CciI	TCATGA	1 cut(s)	2194
CfoI	GCGC	6 cut(s)	138, 1112, 1835, 2437, 2439, 2468
Cfr10I	RCCGGY	1 cut(s)	379
Cfr13I	GGNCC	4 cut(s)	187, 250, 823, 2293
ClaI	ATCGAT	1 cut(s)	2324
Csp6I	GTAC	6 cut(s)	42, 53, 1355, 1407, 1990, 2158
CviQI	GTAC	6 cut(s)	42, 53, 1355, 1407, 1990, 2158
EaeI	YGGCCR	1 cut(s)	213
Eam1104I	CTCTTC	3 cut(s)	926, 1895, 2541
EarI	CTCTTC	3 cut(s)	926, 1895, 2541
EciI	GGCGGA	2 cut(s)	1881, 1985
Ecl136II	GAGCTC	1 cut(s)	2272
Eco130I	CCWWGG	5 cut(s)	45, 374, 1156, 1517, 1811
Eco147I	AGGCCT	1 cut(s)	2552
Eco24I	GRGCYC	1 cut(s)	2274
Eco32I	GATATC	3 cut(s)	1141, 1177, 1765
Eco47I	GGWCC	4 cut(s)	187, 250, 823, 2293
Eco53kI	GAGCTC	1 cut(s)	2272
Eco57I	CTGAAG	1 cut(s)	1001
EcoICRI	GAGCTC	1 cut(s)	2272
EcoO109I	RGGNCCY	2 cut(s)	250, 2293
EcoRII	CCWGG	7 cut(s)	189, 257, 460, 671, 1828, 1924, 2358
EcoRV	GATATC	3 cut(s)	1141, 1177, 1765
EcoT14I	CCWWGG	5 cut(s)	45, 374, 1156, 1517, 1811
EcoT38I	GRGCYC	1 cut(s)	2274
ErhI	CCWWGG	5 cut(s)	45, 374, 1156, 1517, 1811
Esp3I	CGTCTC	1 cut(s)	2524
FalI	AAGNNNNNCTT	2 cut(s)	1656, 1688
FaqI	GGGAC	1 cut(s)	2381
FauI	CCCGC	1 cut(s)	703
FblI	GTMKAC	1 cut(s)	1249
Fnu4HI	GCNGC	8 cut(s)	134, 396, 891, 1425, 1563, 1977, 2049, 2440
FokI	GGATG	8 cut(s)	310, 688, 701, 1024, 1057, 1289, 1480, 2376
FriOI	GRGCYC	1 cut(s)	2274
Fsp4HI	GCNGC	8 cut(s)	134, 396, 891, 1425, 1563, 1977, 2049, 2440
FspBI	CTAG	8 cut(s)	309, 719, 1499, 1506, 1538, 2033, 2043, 2162
GlaI	GCGC	6 cut(s)	137, 1111, 1834, 2436, 2438, 2467
GluI	GCNGC	8 cut(s)	134, 396, 891, 1425, 1563, 1977, 2049, 2440
GsaI	CCCAGC	3 cut(s)	889, 1324, 2207
GsuI	CTGGAG	2 cut(s)	483, 716
HaeIII	GGCC	3 cut(s)	215, 379, 2552
HapII	CCGG	2 cut(s)	380, 1042
HhaI	GCGC	6 cut(s)	138, 1112, 1835, 2437, 2439, 2468
Hin6I	GCGC	6 cut(s)	136, 1110, 1833, 2435, 2437, 2466
HinP1I	GCGC	6 cut(s)	136, 1110, 1833, 2435, 2437, 2466
HincII	GTYRAC	2 cut(s)	1250, 1885
HindII	GTYRAC	2 cut(s)	1250, 1885
HindIII	AAGCTT	2 cut(s)	851, 1596
HpaII	CCGG	2 cut(s)	380, 1042
HphI	GGTGA	3 cut(s)	356, 1321, 2219
Hpy166II	GTNNAC	4 cut(s)	823, 969, 1250, 1885
Hpy8I	GTNNAC	4 cut(s)	823, 969, 1250, 1885
HpyAV	CCTTC	3 cut(s)	241, 244, 1957
HpyCH4III	ACNGT	9 cut(s)	516, 577, 792, 1244, 1446, 1454, 2141, 2372, 2518
HpyCH4IV	ACGT	2 cut(s)	2114, 2301
HpyF10VI	GCNNNNNNNGC	8 cut(s)	392, 401, 700, 767, 1872, 1907, 1976, 2434
HpySE526I	ACGT	2 cut(s)	2114, 2301
HspAI	GCGC	6 cut(s)	136, 1110, 1833, 2435, 2437, 2466
KpnI	GGTACC	1 cut(s)	2161
Lsp1109I	GCAGC	7 cut(s)	145, 382, 902, 1436, 1549, 1963, 2426
LweI	GCATC	9 cut(s)	120, 148, 723, 723, 1203, 1266, 1458, 2330, 2503
MaeI	CTAG	8 cut(s)	309, 719, 1499, 1506, 1538, 2033, 2043, 2162
MaeII	ACGT	2 cut(s)	2114, 2301
MaeIII	GTNAC	5 cut(s)	104, 123, 571, 1639, 2179
MfeI	CAATTG	2 cut(s)	1485, 1911
MflI	RGATCY	5 cut(s)	261, 326, 592, 1102, 1981
MhlI	GDGCHC	3 cut(s)	1534, 2274, 2488
MlsI	TGGCCA	1 cut(s)	215
MluCI	AATT	9 cut(s)	174, 617, 807, 1121, 1393, 1485, 1524, 1911, 2151
MluNI	TGGCCA	1 cut(s)	215
MlyI	GAGTC	9 cut(s)	274, 329, 462, 707, 1103, 1181, 2177, 2324, 2353
MmeI	TCCRAC	3 cut(s)	498, 1116, 1964
Mox20I	TGGCCA	1 cut(s)	215
MroXI	GAANNNNTTC	2 cut(s)	1710, 2535
MscI	TGGCCA	1 cut(s)	215
MseI	TTAA	5 cut(s)	501, 996, 1145, 1418, 1662
MslI	CAYNNNNRTG	1 cut(s)	1155
Msp20I	TGGCCA	1 cut(s)	215
MspA1I	CMGCKG	1 cut(s)	395
MspI	CCGG	2 cut(s)	380, 1042
MspR9I	CCNGG	7 cut(s)	191, 259, 462, 673, 1830, 1926, 2360
MunI	CAATTG	2 cut(s)	1485, 1911
Mva1269I	GAATGC	2 cut(s)	712, 1852
MvaI	CCWGG	7 cut(s)	191, 259, 462, 673, 1830, 1926, 2360
MvnI	CGCG	1 cut(s)	2437
MwoI	GCNNNNNNNGC	8 cut(s)	392, 401, 700, 767, 1872, 1907, 1976, 2434
NcoI	CCATGG	1 cut(s)	1156
NmuCI	GTSAC	3 cut(s)	123, 571, 1639
NspI	RCATGY	4 cut(s)	694, 1154, 1480, 2428
PaeI	GCATGC	1 cut(s)	2428
PagI	TCATGA	1 cut(s)	2194
PauI	GCGCGC	1 cut(s)	2435
PceI	AGGCCT	1 cut(s)	2552
PciI	ACATGT	1 cut(s)	1476
PcsI	WCGNNNNNNNCGW	1 cut(s)	2514
PctI	GAATGC	2 cut(s)	712, 1852
PdmI	GAANNNNTTC	2 cut(s)	1710, 2535
PfeI	GAWTC	6 cut(s)	4, 493, 543, 629, 755, 2210
PfoI	TCCNGGA	2 cut(s)	189, 257
PkrI	GCNGC	8 cut(s)	135, 397, 892, 1426, 1564, 1978, 2050, 2441
PleI	GAGTC	9 cut(s)	274, 328, 462, 706, 1102, 1181, 2176, 2323, 2352
PpsI	GAGTC	9 cut(s)	274, 328, 462, 706, 1102, 1181, 2176, 2323, 2352
PpuMI	RGGWCCY	2 cut(s)	250, 2293
PscI	ACATGT	1 cut(s)	1476
Psp124BI	GAGCTC	1 cut(s)	2274
Psp1406I	AACGTT	1 cut(s)	2301
Psp5II	RGGWCCY	2 cut(s)	250, 2293
Psp6I	CCWGG	7 cut(s)	189, 257, 460, 671, 1828, 1924, 2358
PspFI	CCCAGC	3 cut(s)	885, 1320, 2203
PspGI	CCWGG	7 cut(s)	189, 257, 460, 671, 1828, 1924, 2358
PspPI	GGNCC	4 cut(s)	187, 250, 823, 2293
PspPPI	RGGWCCY	2 cut(s)	250, 2293
PstI	CTGCAG	1 cut(s)	1981
PstNI	CAGNNNCTG	3 cut(s)	421, 440, 575
PsuI	RGATCY	5 cut(s)	261, 326, 592, 1102, 1981
PteI	GCGCGC	1 cut(s)	2435
PvuII	CAGCTG	1 cut(s)	395
RsaI	GTAC	6 cut(s)	43, 54, 1356, 1408, 1991, 2159
RsaNI	GTAC	6 cut(s)	42, 53, 1355, 1407, 1990, 2158
RseI	CAYNNNNRTG	1 cut(s)	1155
SacI	GAGCTC	1 cut(s)	2274
SalI	GTCGAC	1 cut(s)	1248
SaqAI	TTAA	5 cut(s)	501, 996, 1145, 1418, 1662
SatI	GCNGC	8 cut(s)	134, 396, 891, 1425, 1563, 1977, 2049, 2440
Sau96I	GGNCC	4 cut(s)	187, 250, 823, 2293
SchI	GAGTC	9 cut(s)	274, 329, 462, 707, 1103, 1181, 2177, 2324, 2353
ScrFI	CCNGG	7 cut(s)	191, 259, 462, 673, 1830, 1926, 2360
SduI	GDGCHC	3 cut(s)	1534, 2274, 2488
SfaNI	GCATC	9 cut(s)	120, 148, 723, 723, 1203, 1266, 1458, 2330, 2503
SfcI	CTRYAG	3 cut(s)	64, 1243, 1977
SinI	GGWCC	4 cut(s)	187, 250, 823, 2293
SmiMI	CAYNNNNRTG	1 cut(s)	1155
SmlI	CTYRAG	2 cut(s)	782, 1857
SmoI	CTYRAG	2 cut(s)	782, 1857
SpeI	ACTAGT	1 cut(s)	2042
SphI	GCATGC	1 cut(s)	2428
Sse9I	AATT	9 cut(s)	174, 617, 807, 1121, 1393, 1485, 1524, 1911, 2151
SseBI	AGGCCT	1 cut(s)	2552
SsiI	CCGC	8 cut(s)	277, 710, 1565, 1866, 1970, 2048, 2481, 2540
SspI	AATATT	2 cut(s)	947, 2063
SspMI	CTAG	8 cut(s)	309, 719, 1499, 1506, 1538, 2033, 2043, 2162
SstI	GAGCTC	1 cut(s)	2274
StuI	AGGCCT	1 cut(s)	2552
StyD4I	CCNGG	7 cut(s)	189, 257, 460, 671, 1828, 1924, 2358
StyI	CCWWGG	5 cut(s)	45, 374, 1156, 1517, 1811
TaaI	ACNGT	9 cut(s)	516, 577, 792, 1244, 1446, 1454, 2141, 2372, 2518
TaiI	ACGT	2 cut(s)	2117, 2304
TasI	AATT	9 cut(s)	174, 617, 807, 1121, 1393, 1485, 1524, 1911, 2151
TatI	WGTACW	1 cut(s)	1989
TauI	GCSGC	1 cut(s)	2051
TfiI	GAWTC	6 cut(s)	4, 493, 543, 629, 755, 2210
Tru1I	TTAA	5 cut(s)	501, 996, 1145, 1418, 1662
Tru9I	TTAA	5 cut(s)	501, 996, 1145, 1418, 1662
TscAI	CASTG	7 cut(s)	93, 132, 413, 576, 777, 976, 2146
TseFI	GTSAC	3 cut(s)	123, 571, 1639
TseI	GCWGC	7 cut(s)	133, 395, 890, 1424, 1562, 1976, 2439
Tsp45I	GTSAC	3 cut(s)	123, 571, 1639
TspGWI	ACGGA	2 cut(s)	605, 1614
TspRI	CASTG	7 cut(s)	93, 132, 413, 576, 777, 976, 2146
VpaK11BI	GGWCC	4 cut(s)	187, 250, 823, 2293
XapI	RAATTY	2 cut(s)	617, 2151
XbaI	TCTAGA	2 cut(s)	1505, 1537
XceI	RCATGY	4 cut(s)	694, 1154, 1480, 2428
XmiI	GTMKAC	1 cut(s)	1249
XmnI	GAANNNNTTC	2 cut(s)	1710, 2535
XspI	CTAG	8 cut(s)	309, 719, 1499, 1506, 1538, 2033, 2043, 2162

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.