Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0010880

Physical Location & Seq

Genomic Coordinates Reverse (-)

724072 .. 736365

Gene Structure 12294 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g01330.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3798 bp

ATGGCGGTTCCGGTCGAAGAAGCCATCGCTGCGCTATCTACATTCTCACTTGAGGATGATCAAGCAGAGGTTCAGGGACCTGGAGTTTGGGTTTCGACCGATACCGGAGCAATGGATAGTCCAATTGAGTATAGCGATGTTTCTGCATATCGCCTGTCTCTATCAGAAGACACAAAAGCTCTTAATCAACTGAATGCTCTTATCCTTGAGGGAAAGGAGATGGGATCGGTGCTTTATACATATCGGAGTTGTGTCAAAGCACTTCCTCAGCTTCCGGATTCTATGAAACAAAGTCAACCTGAATTGTACCTTGAAACTTATCAAGTTCTGGACTTGGAAATGAGCCGCCTACGTGAAATACAGCGCTGGCAAGCATCAGCTGCATCCAAGCTAGCTGCAGATATGCAACGCTTCTCAAGGCCTGAGAGACGCATTAATGGACCTACAGTAACTCATCTCTGGTCCATGTTGAAGTTACTTGACACTTTGGTGCAACTCGATCATCTTAAAAATGCAAAAGCCAGCATACCAAATGATTTCTCTTGGTATAAAAGGACATTCACACAAGTAAGCGTACAGTGGCATGATACTGATTCTATGAGAGAGGAGTTGGATGACTTACAGATTTTCCTTAGCACAAGGTGGGCTATCTTGTTGAATTTGCATGCTGAGATGTTCCGCGTGAACAATGTAGAAGATATTCTTCAAGTCCTCATAGTTTTTGCTGTCGAGTCACTAGAGTTGGACTTTGCACTTTTGTTCCCAGAGCGGCACATTCTTCTTCGTGCTCTGCCGATTCTCGTTGTCTTAGCAACATCATCAGAAAAAGATAGCGAGTCTTTGTACAAGAGAGTGAAAATCAACAGACTTATTAATATATTCAAGAACGATCCAGTAATTCCTGCATTTCCAGATCTCCATCTTTCTCCTGCTGCAATTATGAAAGAATTGTCAATGTACTTCCAAAAGTTTACTGCCCAAACTCGTCTTCTCAGTCTTCCATCACCTCATGAGCTTCCAGCGCGTGAGGCACAAGAATATCAGAGGCATTATCTAATCATCAATCACATTGGATCCATCCGTGCTGAACATGATGACTTCGCAATTCGTTTTGCATCCTCCATGAATCAGCTATTGTTGTTGAAGTCAACAGATAGTGCTGATATCGAGTGGTGCAAAGAAGTCAAGGGAAATATATATGATGTGATTGTTGAAGGTTTTCAGCTTTTAAGTAGATGGACTGCACGCATCTGGGAACAATGTGCATGGAAATTTTCTCGTCCCTGCAAGGATATAGTTCCGTCTGAATCACAAGAAGCGTCAGCATCATTTTCTGACTATGAAAAGGTGGTACGATATAACTATAATGCAGATGAAAGGAAAGCCCTGGTGGAACTTGTTAGCTACATAAAGAGCATAGGATCAATGATGCAGTCTAGCGACACATTGGTAGCTGACGCTTTATGGGAGACAATACATGCTGAGGTCCAAGATTTTGTTCAGAATACATTGGCCACTATGTTGAGGACTACATTTCGAAAGAAGAAAGATCTTTCTAGGATCCTTTCCGATATGCGGACTCTTTCAGCAGACTGGATGGCAAATACAAGTAAGTCTGAATCTGGACCCCTGCAGCATGGAAGCGAAGAAAGCAAAGGAAATGTTTTTTATCCAAGGCCAGTTGCACCAACAGCTGCTCAGGTTCACTGCCTGCAGTTCCTGATATATGAAGTTGTTTCTGGTGGTAATCTTAGGAAGCCTGGAGGGCTCTTTGGGAATAGCGGTTCAGAGATCCCTGTTAATGACCTAAAACAATTAGAAACATTTTTTTACAAGCTTAGCTTCTTCCTGCATATTCTGGACTATTCAGCGACTGTCGCAACTTTGACGGATCTTGGTTTCTTATGGTTTAGAGAATTTTATTTGGAGTCTTCTCGTGTTATTCAGAATCCAGGTATTCTAGAGAGTGTTTTGATACCATTTGACATCTATAACGATTCTGCTCAGCAAGCATTGGTTGTGCTCAAGCAACGGTTCCTCTATGATGAAATTGAGGCTGAGGTGGACCATTGTTTCGACATATTTGTTTCAAAACTCTGTGATACTATTTTCACATATTACAAGAGCTGGGCAGCAAGCGAACTGCTTGATACGTCATTCCTGTTCGCATTGGACAATGGGGAAAGATATTCTGTTGAGCCTATGAGGTTCACAACACTCCTAAAGATGACCAGAGTGAAGTTGCTTGGAAGGATGATTGATTTGAGAAGTTTGATTACTGAGCGGATGAACAAAGTTTTCAGAGACAATATTGAGTTTCTATTTGATCGTTTTGAGTCTCAAGATCTATGTGCTATTGTGGAACTAGAAAATCTGCTGGATATCTTAAAGCATGCCCATGAATTGCTCTCCAGAGATCTTTCAATAGACTCATTCAGTCTAATGTTGAATGAGATGCAAGAAAACATATCACTGGTGTCATATTCTAGTAGACTTGCGTCTCAGATTTGGTCAGAGATGCAGAGTGATTTCCTGCCAAACTTCATCCTTTGTAATACTACCCAGCGATTTACACGATCAGCAAAGGTGCCTCTTGTTCCTGTTCAAAAGCCATCAGTTCCCTCTGCGAAGCCTAATTTCTATTGCGGTACTCAAGAATTAAATGCAGCTCATCAGAGTTTTGCAAGGTTGCACAGTGGATTTTTTGGGATGCCTCACATGTTTTCCATTGTAAGGCTTCTAGGGTCCAGATCATTGCCCTGGCTAATCCGAGCACTTCTAGATCATATATCAAACAAGACAGCTACCCTGGAACCCCTTATAACAGGATTGCAAGAAGCATTGCCAAAATCTATTGGACTGCTTCCTTTTGATGGGGGCGTGACAGGTTGTATGAGGCTGGTTAAAGAACAGCTTACTTGGGGAACCAAATCAGAGCTCAAAGGAGAAGTTCTTCGGGGTATAAAGGAGATTGGAAGTGTATTATATTGGCTGGGGCTTCTTGATATCGTTTTGAGAGAAACAGACACCACACATTTCATGCAAACTGCCCCTTGGTTGGGCTTGCTTCCTGCTGCAGATGGACAAATATTGCATTCTCAAGATGGTGGAGAAAGCCCTATTGTCAACCTCTTTAAATCGGCCACTTTTGCAATTGTGTCAAACCCTGGGTGTCCAAATCCGGCTTCCTTCAATACCTTATCGAAGCAGGCAGAAGCTGCAGATCTTTTGTACAAGGCTAACATGAACACGGGAAGTGTGCTGGAATATTCTCTAGCTTTTACGAGTGCAGCACTGGATAAATACTGTAGTAAATGGAGTGCTGTTCCCAAAACAGGGTTCATTGACATCACAACTTCAAAGGATTTCTATCGCATATACAGTGGCCTTCAAATTTGGTACCTTGAGGAGTCTGTTCGAGTATCACCGAACAGTCAAGATGTGCTGGGTGATTCTGTAGCTTGGGGGGGTTGCACCATAATATACTTGCTTGGGCAGCAGCTGCATTTCGAGCTCTTGGATTTTTCATATCAGGTCCTCAATGTTGCTGAAGTGGAGGCTGCTTCAATTACCCAAACCCATAAGAGCCCTCATTATGCTCAGGGATGGGATGGCCTGTTAGAAGTAATGAAGAAAGCAAGGAGGTTAAACAACCATGTGTTCTCCATGTTAAAGGCGCGTTGCCCGCTTGAAGACAAGACAGCTTGTGCTATCAAGCAAAGTGGTGCCCCTTTGCACCGGATCAAGTTCGAGAACACCGTCTCTGCATTTGAAACACTGCCACAGAAAGAGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008150 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010638 GO:0016043 GO:0030029 GO:0030036 GO:0030154 GO:0030832 GO:0030833 GO:0030838 GO:0031209 GO:0031334 GO:0032271 GO:0032273 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0032989 GO:0032991 GO:0033043 GO:0043254 GO:0044087 GO:0044089 GO:0044424 GO:0044444 GO:0044464 GO:0045010 GO:0048468 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0090558 GO:0090626 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko03013 ko04810 map03013 map04810

Pfam Domains

Protein Families

DUF1394 FragX_IP

Protein Analysis

1266

Amino Acids

143.32

Weight (kDa)

5.54

Isoelectric Point (pI)

44.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FragX_IP	PF05994	350 - 1226	5.6e-302	Cytoplasmic Fragile-X interacting family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010880)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18410 AT5G18410 AT5G18410
fragaria_vesca	FvH4_6g01330 FvH4_6g01330 FvH4_6g01330
malus_domestica	MD12G1252900.v1.1
prunus_persica	Prupe.6G354800_v2.0.a1
pyrus_communis	pycom12g23200
rosa_chinensis	RchiOBHm_Chr3g0448901
rosa_laevigata	RLG00000025868
rosa_multiflora	Rmu_sc0003116.1_g000019
rosa_roxburghii	Rroxscaffold_6G00427090
rosa_rugosa	Rorug02G0617100 Rorug02G0617100
rosa_samantha	Rh3AG015400 Rh3BG015200 Rh3CG014100 Rh3DG015700
rosa_wichuraiana	Rw3G001140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2822
Acc65I	GGTACC	1 cut(s)	3399
AccB1I	GGYRCC	3 cut(s)	2587, 3399, 3725
AccBSI	CCGCTC	2 cut(s)	769, 2284
AccI	GTMKAC	1 cut(s)	2491
AccII	CGCG	3 cut(s)	681, 1024, 3679
AccIII	TCCGGA	1 cut(s)	274
AciI	CCGC	9 cut(s)	5, 346, 679, 769, 1576, 1782, 2284, 2646, 3686
AcoI	YGGCCR	2 cut(s)	1512, 3141
AcsI	RAATTY	4 cut(s)	658, 1271, 1916, 3393
AcuI	CTGAAG	1 cut(s)	3570
AdeI	CACNNNGTG	1 cut(s)	642
AfaI	GTAC	8 cut(s)	308, 576, 845, 959, 1353, 2650, 3233, 3401
AfeI	AGCGCT	1 cut(s)	365
AfiI	CCNNNNNNNGG	7 cut(s)	1575, 2733, 2873, 3058, 3059, 3335, 3336
AflIII	ACRYGT	1 cut(s)	2718
AjnI	CCWGG	7 cut(s)	79, 1386, 1759, 1951, 2759, 2808, 3166
AjuI	GAANNNNNNNTTGG	8 cut(s)	972, 1004, 1482, 1514, 3169, 3201, 3323, 3355
AleI	CACNNNNGTG	1 cut(s)	488
AloI	GAACNNNNNNTCC	2 cut(s)	1768, 1800
Alw21I	GWGCWC	5 cut(s)	790, 2025, 2776, 2940, 3516
Alw26I	GTCTC	7 cut(s)	162, 421, 1463, 2298, 2343, 2505, 3766
AlwNI	CAGNNNCTG	4 cut(s)	1720, 1874, 3218, 3502
Aor13HI	TCCGGA	1 cut(s)	274
Aor51HI	AGCGCT	1 cut(s)	365
AoxI	GGCC	7 cut(s)	419, 1512, 1676, 3141, 3385, 3613, 3792
ApoI	RAATTY	4 cut(s)	658, 1271, 1916, 3393
ArsI	GACNNNNNNTTYG	4 cut(s)	69, 101, 2057, 2089
AseI	ATTAAT	2 cut(s)	435, 873
Asp700I	GAANNNNTTC	3 cut(s)	699, 1218, 2952
Asp718I	GGTACC	1 cut(s)	3399
AspLEI	GCGC	4 cut(s)	34, 366, 1024, 3679
AspS9I	GGNCC	8 cut(s)	77, 440, 462, 1486, 1625, 2065, 2745, 3535
AsuHPI	GGTGA	3 cut(s)	996, 3417, 3461
AsuII	TTCGAA	1 cut(s)	1537
AsuNHI	GCTAGC	1 cut(s)	391
AvaII	GGWCC	8 cut(s)	77, 440, 462, 1486, 1625, 2065, 2745, 3535
BaeGI	GKGCMC	1 cut(s)	3730
BalI	TGGCCA	1 cut(s)	1514
BamHI	GGATCC	2 cut(s)	1073, 1560
BanI	GGYRCC	3 cut(s)	2587, 3399, 3725
BanII	GRGCYC	4 cut(s)	1770, 2940, 3516, 3590
BarI	GAAGNNNNNNTAC	2 cut(s)	2260, 2292
BauI	CACGAG	1 cut(s)	1935
BbsI	GAAGAC	5 cut(s)	174, 980, 989, 1923, 3699
Bbv12I	GWGCWC	5 cut(s)	790, 2025, 2776, 2940, 3516
BbvCI	CCTCAGC	3 cut(s)	267, 1482, 2058
BcgI	CGANNNNNNTGC	2 cut(s)	125, 159
BciT130I	CCWGG	7 cut(s)	81, 1388, 1761, 1953, 2761, 2810, 3168
BclI	TGATCA	1 cut(s)	58
BcoDI	GTCTC	7 cut(s)	162, 421, 1463, 2298, 2343, 2505, 3766
BfmI	CTRYAG	8 cut(s)	396, 444, 1631, 1712, 3075, 3219, 3307, 3456
BfoI	RGCGCY	1 cut(s)	367
BglI	GCCNNNNNGGC	1 cut(s)	1765
BglII	AGATCT	5 cut(s)	913, 1549, 2344, 2416, 3223
BlpI	GCTNAGC	2 cut(s)	1838, 2004
Bme1390I	CCNGG	7 cut(s)	81, 1388, 1761, 1953, 2761, 2810, 3168
Bme18I	GGWCC	8 cut(s)	77, 440, 462, 1486, 1625, 2065, 2745, 3535
BmgT120I	GGNCC	8 cut(s)	77, 440, 462, 1486, 1625, 2065, 2745, 3535
BmrFI	CCNGG	7 cut(s)	81, 1388, 1761, 1953, 2761, 2810, 3168
BmsI	GCATC	9 cut(s)	383, 392, 1124, 1257, 1334, 1419, 2445, 2508, 2700
BmtI	GCTAGC	1 cut(s)	395
BoxI	GACNNNNGTC	1 cut(s)	2497
BpiI	GAAGAC	5 cut(s)	174, 980, 989, 1923, 3699
BpmI	CTGGAG	3 cut(s)	102, 1782, 2395
Bpu10I	CCTNAGC	6 cut(s)	267, 632, 1482, 1698, 2058, 3600
Bpu1102I	GCTNAGC	2 cut(s)	1838, 2004
Bpu14I	TTCGAA	1 cut(s)	1537
BpuEI	CTTGAG	8 cut(s)	71, 227, 400, 2009, 2325, 2637, 3084, 3425
BsaAI	YACGTR	1 cut(s)	353
BsaBI	GATNNNNATC	2 cut(s)	918, 3369
BsaJI	CCNNGG	7 cut(s)	1386, 1673, 2759, 2808, 3053, 3166, 3167
BsaWI	WCCGGW	4 cut(s)	10, 104, 274, 3738
BsaXI	ACNNNNNCTCC	2 cut(s)	75, 105
Bsc4I	CCNNNNNNNGG	7 cut(s)	1575, 2733, 2873, 3058, 3059, 3335, 3336
Bse1I	ACTGG	5 cut(s)	893, 1598, 1679, 2478, 3300
Bse3DI	GCAATG	3 cut(s)	117, 2753, 2840
Bse8I	GATNNNNATC	2 cut(s)	918, 3369
BseAI	TCCGGA	1 cut(s)	274
BseBI	CCWGG	7 cut(s)	81, 1388, 1761, 1953, 2761, 2810, 3168
BseDI	CCNNGG	7 cut(s)	1386, 1673, 2759, 2808, 3053, 3166, 3167
BseJI	GATNNNNATC	2 cut(s)	918, 3369
BseLI	CCNNNNNNNGG	7 cut(s)	1575, 2733, 2873, 3058, 3059, 3335, 3336
BseMI	GCAATG	3 cut(s)	117, 2753, 2840
BseNI	ACTGG	5 cut(s)	893, 1598, 1679, 2478, 3300
BseRI	GAGGAG	2 cut(s)	620, 3422
BseSI	GKGCMC	1 cut(s)	3730
BseYI	CCCAGC	4 cut(s)	2127, 2562, 2992, 3445
BsgI	GTGCAG	2 cut(s)	1227, 3309
Bsh1236I	CGCG	3 cut(s)	681, 1024, 3679
Bsh1285I	CGRYCG	2 cut(s)	15, 99
BshFI	GGCC	7 cut(s)	421, 1514, 1678, 3143, 3387, 3615, 3794
BshNI	GGYRCC	3 cut(s)	2587, 3399, 3725
BsiEI	CGRYCG	2 cut(s)	15, 99
BsiHKAI	GWGCWC	5 cut(s)	790, 2025, 2776, 2940, 3516
BsiSI	CCGG	5 cut(s)	11, 105, 275, 3182, 3739
BslFI	GGGAC	2 cut(s)	90, 1266
BslI	CCNNNNNNNGG	7 cut(s)	1575, 2733, 2873, 3058, 3059, 3335, 3336
BsmAI	GTCTC	7 cut(s)	162, 421, 1463, 2298, 2343, 2505, 3766
BsmBI	CGTCTC	3 cut(s)	421, 2505, 3766
BsmFI	GGGAC	2 cut(s)	90, 1266
BsmI	GAATGC	2 cut(s)	199, 3094
BsnI	GGCC	7 cut(s)	421, 1514, 1678, 3143, 3387, 3615, 3794
Bsp119I	TTCGAA	1 cut(s)	1537
Bsp1286I	GDGCHC	8 cut(s)	790, 1770, 2025, 2776, 2940, 3516, 3590, 3730
Bsp13I	TCCGGA	1 cut(s)	274
Bsp1407I	TGTACA	2 cut(s)	843, 3231
Bsp1720I	GCTNAGC	2 cut(s)	1838, 2004
BspACI	CCGC	9 cut(s)	5, 346, 679, 769, 1576, 1782, 2284, 2646, 3686
BspANI	GGCC	7 cut(s)	421, 1514, 1678, 3143, 3387, 3615, 3794
BspEI	TCCGGA	1 cut(s)	274
BspFNI	CGCG	3 cut(s)	681, 1024, 3679
BspHI	TCATGA	1 cut(s)	1009
BspMAI	CTGCAG	5 cut(s)	400, 1635, 1716, 3079, 3223
BspOI	GCTAGC	1 cut(s)	395
BspT104I	TTCGAA	1 cut(s)	1537
BspT107I	GGYRCC	3 cut(s)	2587, 3399, 3725
BsrBI	CCGCTC	2 cut(s)	769, 2284
BsrDI	GCAATG	3 cut(s)	117, 2753, 2840
BsrGI	TGTACA	2 cut(s)	843, 3231
BsrI	ACTGG	5 cut(s)	893, 1598, 1679, 2478, 3300
BssECI	CCNNGG	7 cut(s)	1386, 1673, 2759, 2808, 3053, 3166, 3167
BssSI	CACGAG	1 cut(s)	1935
BssT1I	CCWWGG	2 cut(s)	1673, 3053
Bst2BI	CACGAG	1 cut(s)	1935
Bst2UI	CCWGG	7 cut(s)	81, 1388, 1761, 1953, 2761, 2810, 3168
Bst4CI	ACNGT	9 cut(s)	448, 579, 1876, 2034, 2696, 3308, 3383, 3434, 3760
BstAPI	GCANNNNNTGC	3 cut(s)	380, 3218, 3502
BstAUI	TGTACA	2 cut(s)	843, 3231
BstBAI	YACGTR	1 cut(s)	353
BstBI	TTCGAA	1 cut(s)	1537
BstFNI	CGCG	3 cut(s)	681, 1024, 3679
BstH2I	RGCGCY	1 cut(s)	367
BstHHI	GCGC	4 cut(s)	34, 366, 1024, 3679
BstMAI	GTCTC	7 cut(s)	162, 421, 1463, 2298, 2343, 2505, 3766
BstMCI	CGRYCG	2 cut(s)	15, 99
BstNI	CCWGG	7 cut(s)	81, 1388, 1761, 1953, 2761, 2810, 3168
BstNSI	RCATGY	4 cut(s)	668, 1481, 2396, 2722
BstPAI	GACNNNNGTC	1 cut(s)	2497
BstSCI	CCNGG	7 cut(s)	79, 1386, 1759, 1951, 2759, 2808, 3166
BstSFI	CTRYAG	8 cut(s)	396, 444, 1631, 1712, 3075, 3219, 3307, 3456
BstSLI	GKGCMC	1 cut(s)	3730
BstUI	CGCG	3 cut(s)	681, 1024, 3679
BstV2I	GAAGAC	5 cut(s)	174, 980, 989, 1923, 3699
BstX2I	RGATCY	9 cut(s)	913, 1073, 1549, 1560, 1791, 1891, 2344, 2416, 3223
BstYI	RGATCY	9 cut(s)	913, 1073, 1549, 1560, 1791, 1891, 2344, 2416, 3223
BsuRI	GGCC	7 cut(s)	421, 1514, 1678, 3143, 3387, 3615, 3794
BtgZI	GCGATG	2 cut(s)	10, 150
BtsI	GCAGTG	2 cut(s)	1705, 3776
BtsIMutI	CAGTG	7 cut(s)	584, 1705, 2471, 2701, 3293, 3388, 3776
CaiI	CAGNNNCTG	4 cut(s)	1720, 1874, 3218, 3502
CciI	TCATGA	1 cut(s)	1009
CfoI	GCGC	4 cut(s)	34, 366, 1024, 3679
Cfr13I	GGNCC	8 cut(s)	77, 440, 462, 1486, 1625, 2065, 2745, 3535
CseI	GACGC	4 cut(s)	438, 1308, 1466, 2487
Csp6I	GTAC	8 cut(s)	307, 575, 844, 958, 1352, 2649, 3232, 3400
CspCI	CAANNNNNGTGG	2 cut(s)	3703, 3738
CviQI	GTAC	8 cut(s)	307, 575, 844, 958, 1352, 2649, 3232, 3400
DraI	TTTAAA	1 cut(s)	3136
DraIII	CACNNNGTG	1 cut(s)	642
EaeI	YGGCCR	2 cut(s)	1512, 3141
Ecl136II	GAGCTC	2 cut(s)	2938, 3514
Eco130I	CCWWGG	2 cut(s)	1673, 3053
Eco147I	AGGCCT	2 cut(s)	421, 3794
Eco24I	GRGCYC	4 cut(s)	1770, 2940, 3516, 3590
Eco32I	GATATC	3 cut(s)	1165, 2383, 3007
Eco47I	GGWCC	8 cut(s)	77, 440, 462, 1486, 1625, 2065, 2745, 3535
Eco47III	AGCGCT	1 cut(s)	365
Eco53kI	GAGCTC	2 cut(s)	2938, 3514
Eco57I	CTGAAG	1 cut(s)	3570
EcoICRI	GAGCTC	2 cut(s)	2938, 3514
EcoO109I	RGGNCCY	2 cut(s)	77, 3535
EcoRII	CCWGG	7 cut(s)	79, 1386, 1759, 1951, 2759, 2808, 3166
EcoRV	GATATC	3 cut(s)	1165, 2383, 3007
EcoT14I	CCWWGG	2 cut(s)	1673, 3053
EcoT38I	GRGCYC	4 cut(s)	1770, 2940, 3516, 3590
ErhI	CCWWGG	2 cut(s)	1673, 3053
Esp3I	CGTCTC	3 cut(s)	421, 2505, 3766
FalI	AAGNNNNNCTT	6 cut(s)	687, 719, 1826, 1858, 2898, 2930
FaqI	GGGAC	2 cut(s)	90, 1266
FauI	CCCGC	1 cut(s)	3693
FbaI	TGATCA	1 cut(s)	58
FblI	GTMKAC	1 cut(s)	2491
FriOI	GRGCYC	4 cut(s)	1770, 2940, 3516, 3590
GlaI	GCGC	4 cut(s)	33, 365, 1023, 3678
GsaI	CCCAGC	4 cut(s)	2131, 2566, 2996, 3449
GsuI	CTGGAG	3 cut(s)	102, 1782, 2395
HaeII	RGCGCY	1 cut(s)	367
HaeIII	GGCC	7 cut(s)	421, 1514, 1678, 3143, 3387, 3615, 3794
HapII	CCGG	5 cut(s)	11, 105, 275, 3182, 3739
HgaI	GACGC	4 cut(s)	438, 1308, 1466, 2487
HhaI	GCGC	4 cut(s)	34, 366, 1024, 3679
Hin6I	GCGC	4 cut(s)	32, 364, 1022, 3677
HinP1I	GCGC	4 cut(s)	32, 364, 1022, 3677
HincII	GTYRAC	3 cut(s)	296, 1149, 3127
HindII	GTYRAC	3 cut(s)	296, 1149, 3127
HindIII	AAGCTT	1 cut(s)	1835
HpaII	CCGG	5 cut(s)	11, 105, 275, 3182, 3739
HphI	GGTGA	3 cut(s)	996, 3417, 3461
Hpy166II	GTNNAC	9 cut(s)	296, 685, 972, 1149, 1705, 2065, 2211, 2492, 3127
Hpy8I	GTNNAC	9 cut(s)	296, 685, 972, 1149, 1705, 2065, 2211, 2492, 3127
HpyAV	CCTTC	4 cut(s)	1208, 2244, 3199, 3398
HpyCH4III	ACNGT	9 cut(s)	448, 579, 1876, 2034, 2696, 3308, 3383, 3434, 3760
HpyCH4IV	ACGT	2 cut(s)	352, 2153
HpySE526I	ACGT	2 cut(s)	352, 2153
HspAI	GCGC	4 cut(s)	32, 364, 1022, 3677
Kpn2I	TCCGGA	1 cut(s)	274
KpnI	GGTACC	1 cut(s)	3403
Ksp22I	TGATCA	1 cut(s)	58
LmnI	GCTCC	1 cut(s)	107
LweI	GCATC	9 cut(s)	383, 392, 1124, 1257, 1334, 1419, 2445, 2508, 2700
MaeII	ACGT	2 cut(s)	352, 2153
MaeIII	GTNAC	4 cut(s)	448, 474, 732, 2881
MbiI	CCGCTC	2 cut(s)	769, 2284
MfeI	CAATTG	2 cut(s)	123, 3153
MflI	RGATCY	9 cut(s)	913, 1073, 1549, 1560, 1791, 1891, 2344, 2416, 3223
MhlI	GDGCHC	8 cut(s)	790, 1770, 2025, 2776, 2940, 3516, 3590, 3730
MlsI	TGGCCA	1 cut(s)	1514
MluNI	TGGCCA	1 cut(s)	1514
MlyI	GAGTC	7 cut(s)	740, 845, 1573, 1937, 2345, 2423, 3419
MmeI	TCCRAC	2 cut(s)	591, 723
Mox20I	TGGCCA	1 cut(s)	1514
MroI	TCCGGA	1 cut(s)	274
MroXI	GAANNNNTTC	3 cut(s)	699, 1218, 2952
MscI	TGGCCA	1 cut(s)	1514
MslI	CAYNNNNRTG	2 cut(s)	488, 2397
Msp20I	TGGCCA	1 cut(s)	1514
MspA1I	CMGCKG	3 cut(s)	380, 1694, 3502
MspI	CCGG	5 cut(s)	11, 105, 275, 3182, 3739
MspR9I	CCNGG	7 cut(s)	81, 1388, 1761, 1953, 2761, 2810, 3168
MunI	CAATTG	2 cut(s)	123, 3153
Mva1269I	GAATGC	2 cut(s)	199, 3094
MvaI	CCWGG	7 cut(s)	81, 1388, 1761, 1953, 2761, 2810, 3168
MvnI	CGCG	3 cut(s)	681, 1024, 3679
NheI	GCTAGC	1 cut(s)	391
NmuCI	GTSAC	2 cut(s)	732, 2881
NspI	RCATGY	4 cut(s)	668, 1481, 2396, 2722
NspV	TTCGAA	1 cut(s)	1537
OliI	CACNNNNGTG	1 cut(s)	488
PaeI	GCATGC	2 cut(s)	668, 2396
PagI	TCATGA	1 cut(s)	1009
PasI	CCCWGGG	1 cut(s)	3167
PceI	AGGCCT	2 cut(s)	421, 3794
PciI	ACATGT	1 cut(s)	2718
PcsI	WCGNNNNNNNCGW	1 cut(s)	3756
PctI	GAATGC	2 cut(s)	199, 3094
PdmI	GAANNNNTTC	3 cut(s)	699, 1218, 2952
PfeI	GAWTC	9 cut(s)	278, 593, 796, 1126, 1307, 1619, 1948, 1997, 3452
PleI	GAGTC	7 cut(s)	739, 844, 1573, 1936, 2344, 2423, 3418
PpsI	GAGTC	7 cut(s)	739, 844, 1573, 1936, 2344, 2423, 3418
Ppu21I	YACGTR	1 cut(s)	353
PpuMI	RGGWCCY	2 cut(s)	77, 3535
PscI	ACATGT	1 cut(s)	2718
PshAI	GACNNNNGTC	1 cut(s)	2497
PshBI	ATTAAT	2 cut(s)	435, 873
PsiI	TTATAA	1 cut(s)	2822
Psp124BI	GAGCTC	2 cut(s)	2940, 3516
Psp5II	RGGWCCY	2 cut(s)	77, 3535
Psp6I	CCWGG	7 cut(s)	79, 1386, 1759, 1951, 2759, 2808, 3166
PspFI	CCCAGC	4 cut(s)	2127, 2562, 2992, 3445
PspGI	CCWGG	7 cut(s)	79, 1386, 1759, 1951, 2759, 2808, 3166
PspPI	GGNCC	8 cut(s)	77, 440, 462, 1486, 1625, 2065, 2745, 3535
PspPPI	RGGWCCY	2 cut(s)	77, 3535
PstI	CTGCAG	5 cut(s)	400, 1635, 1716, 3079, 3223
PstNI	CAGNNNCTG	4 cut(s)	1720, 1874, 3218, 3502
PsuI	RGATCY	9 cut(s)	913, 1073, 1549, 1560, 1791, 1891, 2344, 2416, 3223
PvuII	CAGCTG	3 cut(s)	380, 1694, 3502
RsaI	GTAC	8 cut(s)	308, 576, 845, 959, 1353, 2650, 3233, 3401
RsaNI	GTAC	8 cut(s)	307, 575, 844, 958, 1352, 2649, 3232, 3400
RseI	CAYNNNNRTG	2 cut(s)	488, 2397
SacI	GAGCTC	2 cut(s)	2940, 3516
Sau96I	GGNCC	8 cut(s)	77, 440, 462, 1486, 1625, 2065, 2745, 3535
SchI	GAGTC	7 cut(s)	740, 845, 1573, 1937, 2345, 2423, 3419
ScrFI	CCNGG	7 cut(s)	81, 1388, 1761, 1953, 2761, 2810, 3168
SduI	GDGCHC	8 cut(s)	790, 1770, 2025, 2776, 2940, 3516, 3590, 3730
SfaNI	GCATC	9 cut(s)	383, 392, 1124, 1257, 1334, 1419, 2445, 2508, 2700
SfcI	CTRYAG	8 cut(s)	396, 444, 1631, 1712, 3075, 3219, 3307, 3456
SfuI	TTCGAA	1 cut(s)	1537
SinI	GGWCC	8 cut(s)	77, 440, 462, 1486, 1625, 2065, 2745, 3535
SmiMI	CAYNNNNRTG	2 cut(s)	488, 2397
SmlI	CTYRAG	8 cut(s)	50, 206, 415, 2024, 2340, 2652, 3099, 3404
SmoI	CTYRAG	8 cut(s)	50, 206, 415, 2024, 2340, 2652, 3099, 3404
SphI	GCATGC	2 cut(s)	668, 2396
SseBI	AGGCCT	2 cut(s)	421, 3794
SsiI	CCGC	9 cut(s)	5, 346, 679, 769, 1576, 1782, 2284, 2646, 3686
SspI	AATATT	3 cut(s)	2311, 3090, 3269
SstI	GAGCTC	2 cut(s)	2940, 3516
StuI	AGGCCT	2 cut(s)	421, 3794
StyD4I	CCNGG	7 cut(s)	79, 1386, 1759, 1951, 2759, 2808, 3166
StyI	CCWWGG	2 cut(s)	1673, 3053
TaaI	ACNGT	9 cut(s)	448, 579, 1876, 2034, 2696, 3308, 3383, 3434, 3760
TaiI	ACGT	2 cut(s)	355, 2156
TaqII	GACCGA	1 cut(s)	113
TatI	WGTACW	3 cut(s)	843, 957, 3231
TauI	GCSGC	2 cut(s)	348, 772
TfiI	GAWTC	9 cut(s)	278, 593, 796, 1126, 1307, 1619, 1948, 1997, 3452
TscAI	CASTG	7 cut(s)	584, 1712, 2478, 2701, 3300, 3388, 3783
TseFI	GTSAC	2 cut(s)	732, 2881
Tsp45I	GTSAC	2 cut(s)	732, 2881
TspGWI	ACGGA	3 cut(s)	1070, 1290, 1904
TspRI	CASTG	7 cut(s)	584, 1712, 2478, 2701, 3300, 3388, 3783
VpaK11BI	GGWCC	8 cut(s)	77, 440, 462, 1486, 1625, 2065, 2745, 3535
VspI	ATTAAT	2 cut(s)	435, 873
XapI	RAATTY	4 cut(s)	658, 1271, 1916, 3393
XbaI	TCTAGA	2 cut(s)	1960, 2779
XceI	RCATGY	4 cut(s)	668, 1481, 2396, 2722
XmiI	GTMKAC	1 cut(s)	2491
XmnI	GAANNNNTTC	3 cut(s)	699, 1218, 2952

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.