Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010880

Physical Location & Seq

Genomic Coordinates Reverse (-)

925495 .. 934775

Gene Structure 9281 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ41632

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2865 bp

ATGGCTAAGGTAGGTAACCTTTCCGGTGAGACCTTGACTTCATTTACTTATCAGAGGCATTATCTAATCATCAATCATATTGGATCCATCCGTGCCGAACATGATGACTTCACAATTCGTTTTGCTTCCTCCATGAATCAGCTATTGTTGTTGAAGTCAACAGATAGTGCCGATATTGAGTGGTGCAAAGAAGTCAAGGGAAATATATATGATATGATTGTTGAAGGTTTTCAGCTTTTAAGTAGATGGACTGCACGCATTTGGGAACAATGTGCATGGAAATTTTCTCGCCCCTGCAAGGATATAGTTCCCTCCGAATCACAAGAGGCTTCAGCATCATTTTCTGACTATGAAAAGGTGGTACGTTATAACTATAGTGCGGAGGAAAGGAAAGCGCTGGTGGAACTTGTTAGCTACATAAAGAGCATAGGATCTATGATGCAGTCTAGTGACACATTGGTAGCTGATGCTTTATGGGAGACAATACATGCCGAGGTTCAAGATTTTGTTCAGAATACATTGGCCACTATGTTGCGTACTACCTTTCGAAAGAAGAAGGACCTTTCTAGGATCCTTTCCGATATGCGGACTCTTTCAGCAGACTGGATGGCAAATACAAGTAAGTCTGAATCTGGACCCCTTCAGCATGGAAGTGAAGAAAGCAAAGGAAATGTTTTTTATCCAAGGCCAGTTGCACCAACAGCCGCTCAGGTGCACTGCTTGCAGTTCCTGATATATGAAGTTGTTTCTGGTGGTAACCTTAGGAAGCCTGGAGGGCTCTTTGGGAATAGTGGTTCTGAGATCCCTGTTAATGACCTAAAACAGTTAGAAACATTTTTTTACAAGCTTAGCTTCTTCCTGCATATTCTGGACTATTCAGCGACTGTCGCAATGTTGACGGATCTTGGTTTCTTATGGTTTAGAGAATTTTATTTGGAGTCTTCTCGTGTTATTCAGTTTCCGATCGAATGCTCTCTTCCTTGGATGTTGGTGGATTATGTGCTTGAGTCACATAATGCCGGTATTCTAGAGAGTGTTTTGATACCATTTGACATCTATAACGATTCTGCTCAGCAAGCATTGGTTGTGCTCAAGCAACGGTTCCTCTATGATGAAATTGAGGCTGAGGTGGATCATTGTTTCGACATTTTTGTTTCAAAACTCTGTGATACAATTTTCACATATTACAAGAGCTGGGCAGCAAGCAAGCTACTTGATACGTCATTCCTTTTCGCATTGGACAATGGAGAAAGATACTCTGTCGAGCCTATGAGGTTCACAACACTGCTAAAGATGACCAGAGTGAAGTTGCTTGGAAGGATGATTGATTTAAGGAGTTTGATTACTGAGCGGATGAACAAAGTTTTCAGAGATAATATTGAGTTTCTATATGATCGTTTTGAGTCTCAAGATCTATGTGCTATTGTGGAACTAGAAAATCTGCTGGATACCTTAAAGCATGCCCATGAATTGCTCTCCAGAGATCTTTCAATAGACTCATTCAGTCTAATGTTGAATGAGATGCAAGAAAATATATCACTGGTGTCATATTCTAGTAGACTTGCCTCTCAGATTTGGTCAGAGATGCAGAATGATTTCTTGCCAAACTTCATCCTTTGCAATACTACCCAGCGTTTTACACGATCAGCAAAGGTTCCTCTTGTTCCTGTTCAAAAGCCATCACTTCCCCACGCCAAGCCTAATTTCTATTGTGGTACTCAAGATTTAAATGCAGCTCATCAAAGTTTTGCAAGGTTGCACAGTGGATTTTTTGGAATGCCTCACATGTTTTCCATTGTAAGGCTTCTAGGGTCCAGATCATTGCCCTGGCTAATCCGAGCACTTCTAGATCATATATCTAACAAGACAGCTACCCTGGAACCCTTGATAACAGGATTGCAAGAAGCATTGCCAAAATCTATTGGACTGCTTCCTTTTGATGGAGGCGTGACAGGTTGTATGAGGCTTGTTAAGGAACAGCTTACTTGGGGAACCAAATCAGAGCTCAAAGGAGAAGTTCTTCGGGGTATAAAGGAGATTGGAAGCGTATTATATTGGCTGGGGCTTCTTGATATCGTATTGAGAGAAACAGACACCACACATTTCATGCAAACATCCCCTTGGTTGGGCTTGCTTCCTGCTGCAGATGGACAAATATTACATTCTCAAGATGGTGGAGAAAGCCCTATTGTCAACCTTTTTAAATCAGCTACTTCTGCTATTGTGTCAAACCCTGGGTGTCCAAATCCGGCTTCCTTCAATACCTTATCGAAGCAGGCAGAAGCTGCAGATCTTTTGTACAAGGCTAACATGAACACGGGAAGCGTGCTGGAATATTCTCTAGCTTTTACTAGTGCAGCACTGGATAAATACTGTAGTAAATGGAGTGCTGTTCCCAAAACAGGGTTTATTGATATCACAACTTCAAAGGATTTCTATCGTATATACAGTGGCCTTCAAATTTGGTATCTAGAGGAGTCTGTTCGAGTATTGCCAAACAATCAAGAAGTGCTGGGTGATTCTGTAGCTTGGGGTGGTTGCACCATAATCTACTTGCTTGGGCAACAGCTGCATTTCGAGCTCTTGGATTTTTCATATCAGGTCCTCAATGTTGCTGAAGTGGAGGTTGCATCAATTACCCAAACCCATAAGAGCCCTCATTATGTTCAGGGATGGGATGGCCTGTTAGAAGTAATGAAGAAAGCAAGGAGGTTGAACAACCATGTGTTCTCCATGTTAAAGGCGCGTTGCCCTCTTGAAGATAAAACAGCTTGTGCCATCAAGCAAAGTGGTGCCCCTCTGCACCGGATCAAGTTTGAGAACACCGTCTCTGCATTTGAAACACTGCCACAGAAAGAGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008150 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010638 GO:0016043 GO:0030029 GO:0030036 GO:0030154 GO:0030832 GO:0030833 GO:0030838 GO:0031209 GO:0031334 GO:0032271 GO:0032273 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0032989 GO:0032991 GO:0033043 GO:0043254 GO:0044087 GO:0044089 GO:0044424 GO:0044444 GO:0044464 GO:0045010 GO:0048468 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0090558 GO:0090626 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko03013 ko04810 map03013 map04810

Pfam Domains

Protein Families

DUF1394 FragX_IP

Protein Analysis

954

Amino Acids

107.97

Weight (kDa)

5.81

Isoelectric Point (pI)

40.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FragX_IP	PF05994	20 - 915	0.0	Cytoplasmic Fragile-X interacting family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010880)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18410 AT5G18410 AT5G18410
fragaria_vesca	FvH4_6g01330 FvH4_6g01330 FvH4_6g01330
malus_domestica	MD12G1252900.v1.1
prunus_persica	Prupe.6G354800_v2.0.a1
pyrus_communis	pycom12g23200
rosa_chinensis	RchiOBHm_Chr3g0448901
rosa_laevigata	RLG00000025868
rosa_multiflora	Rmu_sc0003116.1_g000019
rosa_roxburghii	Rroxscaffold_6G00427090
rosa_rugosa	Rorug02G0617100 Rorug02G0617100
rosa_samantha	Rh3AG015400 Rh3BG015200 Rh3CG014100 Rh3DG015700
rosa_wichuraiana	Rw3G001140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	369
AccB1I	GGYRCC	1 cut(s)	2792
AccBSI	CCGCTC	2 cut(s)	707, 1351
AccI	GTMKAC	1 cut(s)	1558
AccII	CGCG	1 cut(s)	2746
AciI	CCGC	4 cut(s)	380, 586, 705, 1351
AclWI	GGATC	9 cut(s)	78, 91, 439, 565, 578, 796, 909, 1140, 2816
AcoI	YGGCCR	1 cut(s)	522
AcsI	RAATTY	3 cut(s)	281, 926, 2460
AcuI	CTGAAG	3 cut(s)	315, 626, 2637
AfaI	GTAC	4 cut(s)	363, 538, 1717, 2300
AfeI	AGCGCT	1 cut(s)	396
AfiI	CCNNNNNNNGG	8 cut(s)	298, 585, 1800, 1940, 2125, 2126, 2402, 2403
AflIII	ACRYGT	1 cut(s)	1785
AhlI	ACTAGT	1 cut(s)	2351
AjnI	CCWGG	4 cut(s)	769, 1826, 1875, 2233
AjuI	GAANNNNNNNTTGG	4 cut(s)	1688, 1720, 2236, 2268
AloI	GAACNNNNNNTCC	2 cut(s)	778, 810
Alw21I	GWGCWC	5 cut(s)	717, 1092, 1843, 2007, 2583
Alw26I	GTCTC	4 cut(s)	23, 473, 1410, 2833
Alw44I	GTGCAC	1 cut(s)	713
AlwI	GGATC	9 cut(s)	78, 91, 439, 565, 578, 796, 909, 1140, 2816
AlwNI	CAGNNNCTG	3 cut(s)	730, 884, 2285
Aor51HI	AGCGCT	1 cut(s)	396
AoxI	GGCC	5 cut(s)	522, 686, 2452, 2680, 2859
ApaLI	GTGCAC	1 cut(s)	713
ApeKI	GCWGC	6 cut(s)	1199, 1733, 2141, 2285, 2357, 2569
ApoI	RAATTY	3 cut(s)	281, 926, 2460
Asp700I	GAANNNNTTC	3 cut(s)	228, 1595, 2019
AspLEI	GCGC	2 cut(s)	397, 2746
AspS9I	GGNCC	4 cut(s)	559, 635, 1812, 2602
AsuHPI	GGTGA	2 cut(s)	38, 2528
AsuII	TTCGAA	1 cut(s)	547
AvaII	GGWCC	4 cut(s)	559, 635, 1812, 2602
AxyI	CCTNAGG	1 cut(s)	761
BaeGI	GKGCMC	2 cut(s)	717, 2797
BalI	TGGCCA	1 cut(s)	524
BamHI	GGATCC	2 cut(s)	83, 570
BanI	GGYRCC	1 cut(s)	2792
BanII	GRGCYC	4 cut(s)	780, 2007, 2583, 2657
BauI	CACGAG	1 cut(s)	945
BbsI	GAAGAC	1 cut(s)	933
Bbv12I	GWGCWC	5 cut(s)	717, 1092, 1843, 2007, 2583
BbvCI	CCTCAGC	1 cut(s)	1125
BbvI	GCAGC	6 cut(s)	1211, 1745, 2128, 2272, 2369, 2556
BciT130I	CCWGG	4 cut(s)	771, 1828, 1877, 2235
BciVI	GTATCC	1 cut(s)	1441
BcoDI	GTCTC	4 cut(s)	23, 473, 1410, 2833
BcuI	ACTAGT	1 cut(s)	2351
BfmI	CTRYAG	5 cut(s)	373, 2142, 2286, 2374, 2523
BfoI	RGCGCY	1 cut(s)	398
BfuI	GTATCC	1 cut(s)	1441
BglI	GCCNNNNNGGC	1 cut(s)	775
BglII	AGATCT	3 cut(s)	1411, 1483, 2290
BisI	GCNGC	7 cut(s)	705, 1200, 1734, 2142, 2286, 2358, 2570
BlpI	GCTNAGC	2 cut(s)	848, 1071
BlsI	GCNGC	7 cut(s)	706, 1201, 1735, 2143, 2287, 2359, 2571
Bme1390I	CCNGG	4 cut(s)	771, 1828, 1877, 2235
Bme18I	GGWCC	4 cut(s)	559, 635, 1812, 2602
BmgT120I	GGNCC	4 cut(s)	559, 635, 1812, 2602
BmiI	GGNNCC	9 cut(s)	85, 572, 637, 1103, 1656, 1813, 1881, 1993, 2794
BmrFI	CCNGG	4 cut(s)	771, 1828, 1877, 2235
BmsI	GCATC	6 cut(s)	344, 429, 457, 1512, 1575, 2639
BpiI	GAAGAC	1 cut(s)	933
BpmI	CTGGAG	2 cut(s)	792, 1462
Bpu10I	CCTNAGC	3 cut(s)	6, 708, 1125
Bpu1102I	GCTNAGC	2 cut(s)	848, 1071
Bpu14I	TTCGAA	1 cut(s)	547
BpuEI	CTTGAG	5 cut(s)	1025, 1076, 1392, 1704, 2151
BsaBI	GATNNNNATC	1 cut(s)	2436
BsaI	GGTCTC	1 cut(s)	23
BsaJI	CCNNGG	8 cut(s)	492, 683, 980, 1826, 1875, 2120, 2233, 2234
BsaWI	WCCGGW	2 cut(s)	23, 2805
Bsc4I	CCNNNNNNNGG	8 cut(s)	298, 585, 1800, 1940, 2125, 2126, 2402, 2403
Bse118I	RCCGGY	1 cut(s)	1019
Bse1I	ACTGG	4 cut(s)	608, 689, 1545, 2367
Bse21I	CCTNAGG	1 cut(s)	761
Bse3DI	GCAATG	3 cut(s)	897, 1820, 1907
Bse8I	GATNNNNATC	1 cut(s)	2436
BseBI	CCWGG	4 cut(s)	771, 1828, 1877, 2235
BseDI	CCNNGG	8 cut(s)	492, 683, 980, 1826, 1875, 2120, 2233, 2234
BseGI	GGATG	9 cut(s)	87, 612, 990, 1326, 1359, 1611, 2114, 2678, 2683
BseJI	GATNNNNATC	1 cut(s)	2436
BseLI	CCNNNNNNNGG	8 cut(s)	298, 585, 1800, 1940, 2125, 2126, 2402, 2403
BseMI	GCAATG	3 cut(s)	897, 1820, 1907
BseMII	CTCAG	6 cut(s)	722, 789, 1085, 1116, 1338, 1583
BseNI	ACTGG	4 cut(s)	608, 689, 1545, 2367
BseRI	GAGGAG	1 cut(s)	2489
BseSI	GKGCMC	2 cut(s)	717, 2797
BseXI	GCAGC	6 cut(s)	1211, 1745, 2128, 2272, 2369, 2556
BseYI	CCCAGC	4 cut(s)	1194, 1629, 2059, 2512
BsgI	GTGCAG	3 cut(s)	237, 2376, 2786
Bsh1236I	CGCG	1 cut(s)	2746
Bsh1285I	CGRYCG	1 cut(s)	966
BshFI	GGCC	5 cut(s)	524, 688, 2454, 2682, 2861
BshNI	GGYRCC	1 cut(s)	2792
BsiEI	CGRYCG	1 cut(s)	966
BsiHKAI	GWGCWC	5 cut(s)	717, 1092, 1843, 2007, 2583
BsiSI	CCGG	4 cut(s)	24, 1020, 2249, 2806
BslI	CCNNNNNNNGG	8 cut(s)	298, 585, 1800, 1940, 2125, 2126, 2402, 2403
BsmAI	GTCTC	4 cut(s)	23, 473, 1410, 2833
BsmBI	CGTCTC	1 cut(s)	2833
BsmI	GAATGC	2 cut(s)	974, 1782
BsnI	GGCC	5 cut(s)	524, 688, 2454, 2682, 2861
Bso31I	GGTCTC	1 cut(s)	23
Bsp119I	TTCGAA	1 cut(s)	547
Bsp1286I	GDGCHC	8 cut(s)	717, 780, 1092, 1843, 2007, 2583, 2657, 2797
Bsp1407I	TGTACA	1 cut(s)	2298
Bsp1720I	GCTNAGC	2 cut(s)	848, 1071
BspACI	CCGC	4 cut(s)	380, 586, 705, 1351
BspANI	GGCC	5 cut(s)	524, 688, 2454, 2682, 2861
BspCNI	CTCAG	6 cut(s)	721, 790, 1084, 1117, 1339, 1582
BspFNI	CGCG	1 cut(s)	2746
BspLI	GGNNCC	9 cut(s)	85, 572, 637, 1103, 1656, 1813, 1881, 1993, 2794
BspMAI	CTGCAG	2 cut(s)	2146, 2290
BspPI	GGATC	9 cut(s)	78, 91, 439, 565, 578, 796, 909, 1140, 2816
BspT104I	TTCGAA	1 cut(s)	547
BspT107I	GGYRCC	1 cut(s)	2792
BspTNI	GGTCTC	1 cut(s)	23
BsrBI	CCGCTC	2 cut(s)	707, 1351
BsrDI	GCAATG	3 cut(s)	897, 1820, 1907
BsrFI	RCCGGY	1 cut(s)	1019
BsrGI	TGTACA	1 cut(s)	2298
BsrI	ACTGG	4 cut(s)	608, 689, 1545, 2367
BssAI	RCCGGY	1 cut(s)	1019
BssECI	CCNNGG	8 cut(s)	492, 683, 980, 1826, 1875, 2120, 2233, 2234
BssSI	CACGAG	1 cut(s)	945
BssT1I	CCWWGG	3 cut(s)	683, 980, 2120
Bst2BI	CACGAG	1 cut(s)	945
Bst2UI	CCWGG	4 cut(s)	771, 1828, 1877, 2235
Bst4CI	ACNGT	7 cut(s)	825, 886, 1101, 1763, 2375, 2450, 2827
Bst6I	CTCTTC	1 cut(s)	981
BstAPI	GCANNNNNTGC	3 cut(s)	721, 2285, 2569
BstAUI	TGTACA	1 cut(s)	2298
BstBI	TTCGAA	1 cut(s)	547
BstC8I	GCNNGC	9 cut(s)	256, 722, 1077, 1204, 1208, 1461, 2132, 2277, 2327
BstDEI	CTNAG	9 cut(s)	6, 708, 761, 798, 848, 1071, 1125, 1347, 1569
BstEII	GGTNACC	2 cut(s)	14, 755
BstF5I	GGATG	9 cut(s)	87, 612, 990, 1326, 1359, 1611, 2114, 2678, 2683
BstFNI	CGCG	1 cut(s)	2746
BstH2I	RGCGCY	1 cut(s)	398
BstHHI	GCGC	2 cut(s)	397, 2746
BstMAI	GTCTC	4 cut(s)	23, 473, 1410, 2833
BstMCI	CGRYCG	1 cut(s)	966
BstMWI	GCNNNNNNNGC	9 cut(s)	701, 721, 775, 887, 1076, 2216, 2285, 2569, 2578
BstNI	CCWGG	4 cut(s)	771, 1828, 1877, 2235
BstNSI	RCATGY	3 cut(s)	491, 1463, 1789
BstPI	GGTNACC	2 cut(s)	14, 755
BstSCI	CCNGG	4 cut(s)	769, 1826, 1875, 2233
BstSFI	CTRYAG	5 cut(s)	373, 2142, 2286, 2374, 2523
BstSLI	GKGCMC	2 cut(s)	717, 2797
BstUI	CGCG	1 cut(s)	2746
BstV1I	GCAGC	6 cut(s)	1211, 1745, 2128, 2272, 2369, 2556
BstV2I	GAAGAC	1 cut(s)	933
BstX2I	RGATCY	8 cut(s)	83, 431, 570, 801, 901, 1411, 1483, 2290
BstYI	RGATCY	8 cut(s)	83, 431, 570, 801, 901, 1411, 1483, 2290
Bsu36I	CCTNAGG	1 cut(s)	761
BsuI	GTATCC	1 cut(s)	1441
BsuRI	GGCC	5 cut(s)	524, 688, 2454, 2682, 2861
BtsCI	GGATG	9 cut(s)	87, 612, 990, 1326, 1359, 1611, 2114, 2678, 2683
BtsI	GCAGTG	3 cut(s)	715, 1283, 2843
BtsIMutI	CAGTG	7 cut(s)	715, 1283, 1538, 1768, 2360, 2455, 2843
Cac8I	GCNNGC	9 cut(s)	256, 722, 1077, 1204, 1208, 1461, 2132, 2277, 2327
CaiI	CAGNNNCTG	3 cut(s)	730, 884, 2285
CfoI	GCGC	2 cut(s)	397, 2746
Cfr10I	RCCGGY	1 cut(s)	1019
Cfr13I	GGNCC	4 cut(s)	559, 635, 1812, 2602
Csp6I	GTAC	4 cut(s)	362, 537, 1716, 2299
CspCI	CAANNNNNGTGG	2 cut(s)	2770, 2805
CviQI	GTAC	4 cut(s)	362, 537, 1716, 2299
DdeI	CTNAG	9 cut(s)	6, 708, 761, 798, 848, 1071, 1125, 1347, 1569
DraI	TTTAAA	2 cut(s)	1728, 2203
EaeI	YGGCCR	1 cut(s)	522
Eam1104I	CTCTTC	1 cut(s)	981
EarI	CTCTTC	1 cut(s)	981
Ecl136II	GAGCTC	2 cut(s)	2005, 2581
Eco130I	CCWWGG	3 cut(s)	683, 980, 2120
Eco147I	AGGCCT	1 cut(s)	2861
Eco24I	GRGCYC	4 cut(s)	780, 2007, 2583, 2657
Eco31I	GGTCTC	1 cut(s)	23
Eco32I	GATATC	2 cut(s)	2074, 2416
Eco47I	GGWCC	4 cut(s)	559, 635, 1812, 2602
Eco47III	AGCGCT	1 cut(s)	396
Eco53kI	GAGCTC	2 cut(s)	2005, 2581
Eco57I	CTGAAG	3 cut(s)	315, 626, 2637
Eco81I	CCTNAGG	1 cut(s)	761
Eco91I	GGTNACC	2 cut(s)	14, 755
EcoICRI	GAGCTC	2 cut(s)	2005, 2581
EcoO109I	RGGNCCY	2 cut(s)	559, 2602
EcoO65I	GGTNACC	2 cut(s)	14, 755
EcoRII	CCWGG	4 cut(s)	769, 1826, 1875, 2233
EcoRV	GATATC	2 cut(s)	2074, 2416
EcoT14I	CCWWGG	3 cut(s)	683, 980, 2120
EcoT38I	GRGCYC	4 cut(s)	780, 2007, 2583, 2657
ErhI	CCWWGG	3 cut(s)	683, 980, 2120
Esp3I	CGTCTC	1 cut(s)	2833
FalI	AAGNNNNNCTT	2 cut(s)	836, 868
FblI	GTMKAC	1 cut(s)	1558
Fnu4HI	GCNGC	7 cut(s)	705, 1200, 1734, 2142, 2286, 2358, 2570
FokI	GGATG	9 cut(s)	74, 619, 997, 1333, 1366, 1598, 2101, 2685, 2690
FriOI	GRGCYC	4 cut(s)	780, 2007, 2583, 2657
Fsp4HI	GCNGC	7 cut(s)	705, 1200, 1734, 2142, 2286, 2358, 2570
GlaI	GCGC	2 cut(s)	396, 2745
GluI	GCNGC	7 cut(s)	705, 1200, 1734, 2142, 2286, 2358, 2570
GsaI	CCCAGC	4 cut(s)	1198, 1633, 2063, 2516
GsuI	CTGGAG	2 cut(s)	792, 1462
HaeII	RGCGCY	1 cut(s)	398
HaeIII	GGCC	5 cut(s)	524, 688, 2454, 2682, 2861
HapII	CCGG	4 cut(s)	24, 1020, 2249, 2806
HhaI	GCGC	2 cut(s)	397, 2746
Hin6I	GCGC	2 cut(s)	395, 2744
HinP1I	GCGC	2 cut(s)	395, 2744
HincII	GTYRAC	3 cut(s)	159, 897, 2194
HindII	GTYRAC	3 cut(s)	159, 897, 2194
HindIII	AAGCTT	1 cut(s)	845
HpaII	CCGG	4 cut(s)	24, 1020, 2249, 2806
HphI	GGTGA	2 cut(s)	38, 2528
Hpy166II	GTNNAC	6 cut(s)	159, 715, 897, 1278, 1559, 2194
Hpy8I	GTNNAC	6 cut(s)	159, 715, 897, 1278, 1559, 2194
HpyAV	CCTTC	6 cut(s)	218, 550, 650, 1311, 2266, 2465
HpyCH4III	ACNGT	7 cut(s)	825, 886, 1101, 1763, 2375, 2450, 2827
HpyCH4IV	ACGT	2 cut(s)	364, 1220
HpyF10VI	GCNNNNNNNGC	9 cut(s)	701, 721, 775, 887, 1076, 2216, 2285, 2569, 2578
HpyF3I	CTNAG	9 cut(s)	6, 708, 761, 798, 848, 1071, 1125, 1347, 1569
HpySE526I	ACGT	2 cut(s)	364, 1220
HspAI	GCGC	2 cut(s)	395, 2744
Lsp1109I	GCAGC	6 cut(s)	1211, 1745, 2128, 2272, 2369, 2556
LweI	GCATC	6 cut(s)	344, 429, 457, 1512, 1575, 2639
MaeII	ACGT	2 cut(s)	364, 1220
MaeIII	GTNAC	5 cut(s)	14, 449, 755, 1008, 1948
MbiI	CCGCTC	2 cut(s)	707, 1351
MboII	GAAGA	8 cut(s)	565, 668, 847, 933, 968, 2012, 2710, 2771
MflI	RGATCY	8 cut(s)	83, 431, 570, 801, 901, 1411, 1483, 2290
MhlI	GDGCHC	8 cut(s)	717, 780, 1092, 1843, 2007, 2583, 2657, 2797
MlsI	TGGCCA	1 cut(s)	524
MluCI	AATT	9 cut(s)	114, 281, 926, 1116, 1173, 1469, 1702, 2460, 2634
MluNI	TGGCCA	1 cut(s)	524
MlyI	GAGTC	6 cut(s)	583, 947, 1016, 1412, 1490, 2486
Mox20I	TGGCCA	1 cut(s)	524
MroXI	GAANNNNTTC	3 cut(s)	228, 1595, 2019
MscI	TGGCCA	1 cut(s)	524
MseI	TTAA	8 cut(s)	239, 810, 1331, 1454, 1727, 1971, 2202, 2738
MslI	CAYNNNNRTG	2 cut(s)	651, 1464
Msp20I	TGGCCA	1 cut(s)	524
MspA1I	CMGCKG	1 cut(s)	2569
MspI	CCGG	4 cut(s)	24, 1020, 2249, 2806
MspR9I	CCNGG	4 cut(s)	771, 1828, 1877, 2235
Mva1269I	GAATGC	2 cut(s)	974, 1782
MvaI	CCWGG	4 cut(s)	771, 1828, 1877, 2235
MvnI	CGCG	1 cut(s)	2746
MwoI	GCNNNNNNNGC	9 cut(s)	701, 721, 775, 887, 1076, 2216, 2285, 2569, 2578
NlaIV	GGNNCC	9 cut(s)	85, 572, 637, 1103, 1656, 1813, 1881, 1993, 2794
NmeAIII	GCCGAG	1 cut(s)	517
NmuCI	GTSAC	3 cut(s)	449, 1008, 1948
NspI	RCATGY	3 cut(s)	491, 1463, 1789
NspV	TTCGAA	1 cut(s)	547
PaeI	GCATGC	1 cut(s)	1463
PasI	CCCWGGG	1 cut(s)	2234
PceI	AGGCCT	1 cut(s)	2861
PciI	ACATGT	1 cut(s)	1785
PctI	GAATGC	2 cut(s)	974, 1782
PdmI	GAANNNNTTC	3 cut(s)	228, 1595, 2019
PfeI	GAWTC	5 cut(s)	136, 317, 629, 1064, 2519
PkrI	GCNGC	7 cut(s)	706, 1201, 1735, 2143, 2287, 2359, 2571
Ple19I	CGATCG	1 cut(s)	966
PleI	GAGTC	6 cut(s)	583, 946, 1015, 1411, 1490, 2485
PpsI	GAGTC	6 cut(s)	583, 946, 1015, 1411, 1490, 2485
PpuMI	RGGWCCY	2 cut(s)	559, 2602
PscI	ACATGT	1 cut(s)	1785
PsiI	TTATAA	1 cut(s)	369
Psp124BI	GAGCTC	2 cut(s)	2007, 2583
Psp5II	RGGWCCY	2 cut(s)	559, 2602
Psp6I	CCWGG	4 cut(s)	769, 1826, 1875, 2233
PspEI	GGTNACC	2 cut(s)	14, 755
PspFI	CCCAGC	4 cut(s)	1194, 1629, 2059, 2512
PspGI	CCWGG	4 cut(s)	769, 1826, 1875, 2233
PspN4I	GGNNCC	9 cut(s)	85, 572, 637, 1103, 1656, 1813, 1881, 1993, 2794
PspPI	GGNCC	4 cut(s)	559, 635, 1812, 2602
PspPPI	RGGWCCY	2 cut(s)	559, 2602
PstI	CTGCAG	2 cut(s)	2146, 2290
PstNI	CAGNNNCTG	3 cut(s)	730, 884, 2285
PsuI	RGATCY	8 cut(s)	83, 431, 570, 801, 901, 1411, 1483, 2290
PvuI	CGATCG	1 cut(s)	966
PvuII	CAGCTG	1 cut(s)	2569
RsaI	GTAC	4 cut(s)	363, 538, 1717, 2300
RsaNI	GTAC	4 cut(s)	362, 537, 1716, 2299
RseI	CAYNNNNRTG	2 cut(s)	651, 1464
SacI	GAGCTC	2 cut(s)	2007, 2583
SaqAI	TTAA	8 cut(s)	239, 810, 1331, 1454, 1727, 1971, 2202, 2738
SatI	GCNGC	7 cut(s)	705, 1200, 1734, 2142, 2286, 2358, 2570
Sau96I	GGNCC	4 cut(s)	559, 635, 1812, 2602
SchI	GAGTC	6 cut(s)	583, 947, 1016, 1412, 1490, 2486
ScrFI	CCNGG	4 cut(s)	771, 1828, 1877, 2235
SduI	GDGCHC	8 cut(s)	717, 780, 1092, 1843, 2007, 2583, 2657, 2797
SfaNI	GCATC	6 cut(s)	344, 429, 457, 1512, 1575, 2639
SfcI	CTRYAG	5 cut(s)	373, 2142, 2286, 2374, 2523
SfuI	TTCGAA	1 cut(s)	547
SinI	GGWCC	4 cut(s)	559, 635, 1812, 2602
SmiI	ATTTAAAT	1 cut(s)	1728
SmiMI	CAYNNNNRTG	2 cut(s)	651, 1464
SmlI	CTYRAG	5 cut(s)	1004, 1091, 1407, 1719, 2166
SmoI	CTYRAG	5 cut(s)	1004, 1091, 1407, 1719, 2166
SpeI	ACTAGT	1 cut(s)	2351
SphI	GCATGC	1 cut(s)	1463
Sse9I	AATT	9 cut(s)	114, 281, 926, 1116, 1173, 1469, 1702, 2460, 2634
SseBI	AGGCCT	1 cut(s)	2861
SsiI	CCGC	4 cut(s)	380, 586, 705, 1351
SspI	AATATT	3 cut(s)	1378, 2157, 2336
SstI	GAGCTC	2 cut(s)	2007, 2583
StuI	AGGCCT	1 cut(s)	2861
StyD4I	CCNGG	4 cut(s)	769, 1826, 1875, 2233
StyI	CCWWGG	3 cut(s)	683, 980, 2120
SwaI	ATTTAAAT	1 cut(s)	1728
TaaI	ACNGT	7 cut(s)	825, 886, 1101, 1763, 2375, 2450, 2827
TaiI	ACGT	2 cut(s)	367, 1223
TaqI	TCGA	7 cut(s)	547, 966, 1143, 1263, 2270, 2485, 2577
TasI	AATT	9 cut(s)	114, 281, 926, 1116, 1173, 1469, 1702, 2460, 2634
TatI	WGTACW	1 cut(s)	2298
TauI	GCSGC	1 cut(s)	707
TfiI	GAWTC	5 cut(s)	136, 317, 629, 1064, 2519
Tru1I	TTAA	8 cut(s)	239, 810, 1331, 1454, 1727, 1971, 2202, 2738
Tru9I	TTAA	8 cut(s)	239, 810, 1331, 1454, 1727, 1971, 2202, 2738
TscAI	CASTG	7 cut(s)	722, 1290, 1545, 1768, 2367, 2455, 2850
TseFI	GTSAC	3 cut(s)	449, 1008, 1948
TseI	GCWGC	6 cut(s)	1199, 1733, 2141, 2285, 2357, 2569
Tsp45I	GTSAC	3 cut(s)	449, 1008, 1948
TspGWI	ACGGA	2 cut(s)	80, 914
TspRI	CASTG	7 cut(s)	722, 1290, 1545, 1768, 2367, 2455, 2850
VneI	GTGCAC	1 cut(s)	713
VpaK11BI	GGWCC	4 cut(s)	559, 635, 1812, 2602
XapI	RAATTY	3 cut(s)	281, 926, 2460
XbaI	TCTAGA	3 cut(s)	1027, 1846, 2470
XceI	RCATGY	3 cut(s)	491, 1463, 1789
XmiI	GTMKAC	1 cut(s)	1558
XmnI	GAANNNNTTC	3 cut(s)	228, 1595, 2019

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.