AT5G20000

26S protease regulatory subunit 8 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0012336
Physical Location & Seq
Forward (+)
6756633 .. 6759800
3168 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G20000.1

Sequence Viewer

Length: 1260 bp
ATGGCGGCCGTAGGAGTGGAGGCGAGACCTCCTGTGACAGCGATGGAGGAAACCTGCAACGTTAAGGGAGCGGCGGCGAAACAAGGAGAAGGGCTTAACAAGTACTACCTCCAGCATCTCGATGAGCTCCAGCGCCTGCAACGCGAAAAGTCGTATAACCTTAATCGTCTTGAAGCTCAGAGGAATGAACTCAATTCTCGAGTACGAATGCTCAGAGAAGAGTTACAGCTCCTTCAAGAACCTGGGTCCTATGTGGGTGAAGTGGTAAAAGTGATGGGAAAAAACAAGGTCTTGGTTAAGGTTCATCCAGAGGGGAAGTATGTTGTCGATATTGACAAAAGTATAGACATAACGAAACTCACTCCATCAACGAGAGTTGCTCTCCGTAATGATAGCTATGTTCTCCACCTGGTTCTGCCAAGTAAAGTAGATCCCTTGGTTAACCTTATGAAAGTTGAGAAGGTTCCAGACTCCACATATGACATGATTGGTGGTCTTGACCAGCAAATCAAGGAAATAAAGGAGGTCATTGAACTGCCAATCAAGCATCCTGAATTGTTTGAGTCTCTTGGAATTGCGCAGCCAAAGGGTGTGTTGTTGTACGGTCCACCTGGAACTGGGAAGACACTATTGGCTCGGGCTGTGGCACATCACACTGACTGTACTTTCATCAGAGTTTCTGGTTCTGAGCTGGTCCAGAAATACATTGGAGAAGGTTCTAGAATGGTCAGAGAACTTTTTGTGATGGCAAGGGAGCATGCACCATCAATCATCTTCATGGATGAAATCGATAGTATCGGGTCTGCTCGTATGGAATCTGGTAGTGGAAATGGTGACAGTGAGGTGCAAAGGACTATGCTTGAGCTTCTCAATCAACTTGACGGATTCGAGGCGTCAAACAAAATCAAGGTTTTGATGGCTACAAATCGTATTGATATTCTGGATCAAGCTCTTCTCCGGCCTGGAAGGATTGATAGGAAAATTGAATTTCCTAATCCTAATGAAGAGTCACGTTTTGATATCTTGAAGATACACTCAAGGAAAATGAATTTGATGCGTGGAATCGATCTGAAAAAGATTGCAGAGAAGATGAATGGTGCTTCAGGTGCTGAGCTGAAGGCTGTATGCACGGAGGCGGGCATGTTTGCACTTCGTGAGAGGAGAGTACATGTGACTCAGGAAGACTTTGAGATGGCTGTGGCGAAGGTAATGAAGAAAGACACAGAGAAGAACATGTCTCTGCGTAAGCTCTGGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000502 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005838 GO:0005886 GO:0006355 GO:0006357 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0008134 GO:0008150 GO:0008152 GO:0008540 GO:0009056 GO:0009057 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010243 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017025 GO:0017111 GO:0019219 GO:0019222 GO:0019538 GO:0019941 GO:0022624 GO:0030162 GO:0030163 GO:0030433 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031331 GO:0031334 GO:0031595 GO:0031597 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033554 GO:0034976 GO:0036402 GO:0036503 GO:0042176 GO:0042221 GO:0042623 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043632 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0045893 GO:0045898 GO:0045899 GO:0045935 GO:0045944 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051603 GO:0051716 GO:0060255 GO:0060260 GO:0060261 GO:0061136 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901800 GO:1902494 GO:1902680 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1903506 GO:1903508 GO:1905368 GO:1905369 GO:2000112 GO:2000142 GO:2000144 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03050 ko05169 map03050 map05169
Pfam Domains
Protein Families
AAA

Protein Analysis

419

Amino Acids

47.16

Weight (kDa)

8.69

Isoelectric Point (pI)

38.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Prot_ATP_ID_OB_C PF16450 85 - 140 1.6e-13 Proteasomal ATPase OB C-terminal domain
AAA PF00004 198 - 331 5.4e-44 ATPase family associated with various cellular activities (AAA)
AAA_2 PF07724 198 - 291 1e-05 AAA domain (Cdc48 subfamily)
AAA_lid_PRS2_C PF23902 336 - 405 1.5e-06 PRS2 AAA+ lid C-terminal domain
AAA_lid_3 PF17862 355 - 397 1.5e-14 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012336)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G19990 AT5G19990 AT5G19990 AT5G20000
fragaria_vesca FvH4_1g03980
malus_domestica MD02G1226600.v1.1 MD07G1087400.v1.1
prunus_persica Prupe.7G237100_v2.0.a1
pyrus_communis pycom02g19560
rosa_chinensis RchiOBHm_Chr2g0089461
rosa_laevigata RLG00000016031
rosa_multiflora Rmu_sc0000197.1_g000006
rosa_roxburghii Rroxscaffold_2G00151910 Rroxscaffold_6G00403280
rosa_rugosa Rorug02G0001000
rosa_samantha Rh2AG046200 Rh2CG046600 Rh2DG046200
rosa_wichuraiana Rw2G003640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 579
Acc36I ACCTGC 1 cut(s) 62
AccBSI CCGCTC 1 cut(s) 71
AccII CGCG 1 cut(s) 144
AciI CCGC 4 cut(s) 5, 71, 74, 1136
AclI AACGTT 1 cut(s) 60
AclWI GGATC 2 cut(s) 425, 951
AcoI YGGCCR 1 cut(s) 6
AcsI RAATTY 2 cut(s) 986, 1048
AcuI CTGAAG 2 cut(s) 1086, 1136
AcyI GRCGYC 1 cut(s) 893
AdeI CACNNNGTG 1 cut(s) 1154
AfaI GTAC 5 cut(s) 104, 204, 602, 664, 1167
AfiI CCNNNNNNNGG 1 cut(s) 617
AflIII ACRYGT 2 cut(s) 1168, 1233
AgsI TTSAA 5 cut(s) 173, 236, 533, 986, 1027
AjnI CCWGG 4 cut(s) 241, 408, 610, 961
AjuI GAANNNNNNNTTGG 2 cut(s) 614, 646
AluBI AGCT 9 cut(s) 127, 176, 229, 396, 691, 865, 950, 1114, 1249
AluI AGCT 9 cut(s) 127, 176, 229, 396, 691, 865, 950, 1114, 1249
Alw21I GWGCWC 1 cut(s) 129
Alw26I GTCTC 3 cut(s) 19, 570, 1242
AlwI GGATC 2 cut(s) 425, 951
AlwNI CAGNNNCTG 2 cut(s) 136, 1109
Ama87I CYCGRG 2 cut(s) 198, 636
AoxI GGCC 2 cut(s) 6, 959
ApeKI GCWGC 1 cut(s) 580
ApoI RAATTY 2 cut(s) 986, 1048
AspLEI GCGC 2 cut(s) 135, 580
AspS9I GGNCC 3 cut(s) 246, 605, 694
AsuHPI GGTGA 2 cut(s) 269, 845
AvaI CYCGRG 2 cut(s) 198, 636
AvaII GGWCC 3 cut(s) 246, 605, 694
BanII GRGCYC 1 cut(s) 129
BbsI GAAGAC 2 cut(s) 629, 1188
Bbv12I GWGCWC 1 cut(s) 129
BbvI GCAGC 1 cut(s) 592
BccI CCATC 7 cut(s) 37, 268, 373, 739, 772, 910, 1186
BciT130I CCWGG 4 cut(s) 243, 410, 612, 963
BcoDI GTCTC 3 cut(s) 19, 570, 1242
BfaI CTAG 1 cut(s) 720
BfoI RGCGCY 1 cut(s) 136
BfuAI ACCTGC 1 cut(s) 62
BisI GCNGC 4 cut(s) 6, 72, 75, 581
BlpI GCTNAGC 1 cut(s) 1110
BlsI GCNGC 4 cut(s) 7, 73, 76, 582
BmcAI AGTACT 1 cut(s) 104
Bme1390I CCNGG 4 cut(s) 243, 410, 612, 963
Bme18I GGWCC 3 cut(s) 246, 605, 694
BmeT110I CYCGRG 2 cut(s) 198, 636
BmgT120I GGNCC 3 cut(s) 246, 605, 694
BmiI GGNNCC 2 cut(s) 247, 465
BmrFI CCNGG 4 cut(s) 243, 410, 612, 963
BmrI ACTGGG 1 cut(s) 627
BmsI GCATC 3 cut(s) 124, 556, 1044
BmuI ACTGGG 1 cut(s) 627
BpiI GAAGAC 2 cut(s) 629, 1188
BplI GAGNNNNNCTC 4 cut(s) 364, 396, 366, 398
BpmI CTGGAG 2 cut(s) 95, 113
Bpu1102I GCTNAGC 1 cut(s) 1110
BpuEI CTTGAG 2 cut(s) 881, 1021
Bsa29I ATCGAT 2 cut(s) 789, 1065
BsaHI GRCGYC 1 cut(s) 893
BsaI GGTCTC 1 cut(s) 19
BsaJI CCNNGG 2 cut(s) 242, 435
Bsc4I CCNNNNNNNGG 1 cut(s) 617
Bse1I ACTGG 1 cut(s) 622
BseBI CCWGG 4 cut(s) 243, 410, 612, 963
BseCI ATCGAT 2 cut(s) 789, 1065
BseDI CCNNGG 2 cut(s) 242, 435
BseGI GGATG 3 cut(s) 304, 547, 787
BseLI CCNNNNNNNGG 1 cut(s) 617
BseMII CTCAG 5 cut(s) 191, 226, 678, 1101, 1190
BseNI ACTGG 1 cut(s) 622
BseRI GAGGAG 1 cut(s) 1174
BseX3I CGGCCG 1 cut(s) 6
BseXI GCAGC 1 cut(s) 592
Bsh1236I CGCG 1 cut(s) 144
Bsh1285I CGRYCG 1 cut(s) 9
BshFI GGCC 2 cut(s) 8, 961
BshVI ATCGAT 2 cut(s) 789, 1065
BsiEI CGRYCG 1 cut(s) 9
BsiHKAI GWGCWC 1 cut(s) 129
BsiHKCI CYCGRG 2 cut(s) 198, 636
BsiSI CCGG 1 cut(s) 958
BslI CCNNNNNNNGG 1 cut(s) 617
BsmAI GTCTC 3 cut(s) 19, 570, 1242
BsmI GAATGC 1 cut(s) 213
BsnI GGCC 2 cut(s) 8, 961
Bso31I GGTCTC 1 cut(s) 19
BsoBI CYCGRG 2 cut(s) 198, 636
Bsp1286I GDGCHC 1 cut(s) 129
Bsp143I GATC 3 cut(s) 430, 943, 1066
Bsp1720I GCTNAGC 1 cut(s) 1110
BspACI CCGC 4 cut(s) 5, 71, 74, 1136
BspANI GGCC 2 cut(s) 8, 961
BspCNI CTCAG 5 cut(s) 190, 225, 679, 1102, 1189
BspDI ATCGAT 2 cut(s) 789, 1065
BspFNI CGCG 1 cut(s) 144
BspLI GGNNCC 2 cut(s) 247, 465
BspMI ACCTGC 1 cut(s) 62
BspPI GGATC 2 cut(s) 425, 951
BspQI GCTCTTC 1 cut(s) 957
BspTNI GGTCTC 1 cut(s) 19
BsrBI CCGCTC 1 cut(s) 71
BsrI ACTGG 1 cut(s) 622
BssECI CCNNGG 2 cut(s) 242, 435
BssMI GATC 3 cut(s) 430, 943, 1066
BssNI GRCGYC 1 cut(s) 893
BssT1I CCWWGG 1 cut(s) 435
Bst2UI CCWGG 4 cut(s) 243, 410, 612, 963
Bst4CI ACNGT 3 cut(s) 605, 662, 839
Bst6I CTCTTC 3 cut(s) 213, 957, 999
BstACI GRCGYC 1 cut(s) 893
BstC8I GCNNGC 3 cut(s) 137, 759, 1138
BstDEI CTNAG 5 cut(s) 177, 212, 687, 1110, 1176
BstF5I GGATG 3 cut(s) 304, 547, 787
BstFNI CGCG 1 cut(s) 144
BstH2I RGCGCY 1 cut(s) 136
BstHHI GCGC 2 cut(s) 135, 580
BstKTI GATC 3 cut(s) 433, 946, 1069
BstMAI GTCTC 3 cut(s) 19, 570, 1242
BstMBI GATC 3 cut(s) 430, 943, 1066
BstMCI CGRYCG 1 cut(s) 9
BstMWI GCNNNNNNNGC 3 cut(s) 141, 544, 1106
BstNI CCWGG 4 cut(s) 243, 410, 612, 963
BstNSI RCATGY 4 cut(s) 761, 1144, 1172, 1237
BstSCI CCNGG 4 cut(s) 241, 408, 610, 961
BstUI CGCG 1 cut(s) 144
BstV1I GCAGC 1 cut(s) 592
BstV2I GAAGAC 2 cut(s) 629, 1188
BstX2I RGATCY 1 cut(s) 430
BstYI RGATCY 1 cut(s) 430
BstZI CGGCCG 1 cut(s) 6
Bsu15I ATCGAT 2 cut(s) 789, 1065
BsuRI GGCC 2 cut(s) 8, 961
BsuTUI ATCGAT 2 cut(s) 789, 1065
BtgZI GCGATG 1 cut(s) 56
BtsCI GGATG 3 cut(s) 304, 547, 787
BtsIMutI CAGTG 2 cut(s) 654, 844
BveI ACCTGC 1 cut(s) 62
Cac8I GCNNGC 3 cut(s) 137, 759, 1138
CaiI CAGNNNCTG 2 cut(s) 136, 1109
CfoI GCGC 2 cut(s) 135, 580
Cfr13I GGNCC 3 cut(s) 246, 605, 694
ClaI ATCGAT 2 cut(s) 789, 1065
CseI GACGC 1 cut(s) 882
CsiI ACCWGGT 1 cut(s) 408
Csp6I GTAC 5 cut(s) 103, 203, 601, 663, 1166
CviAII CATG 6 cut(s) 484, 758, 778, 1141, 1169, 1234
CviQI GTAC 5 cut(s) 103, 203, 601, 663, 1166
DdeI CTNAG 5 cut(s) 177, 212, 687, 1110, 1176
DpnI GATC 3 cut(s) 432, 945, 1068
DpnII GATC 3 cut(s) 430, 943, 1066
DraIII CACNNNGTG 1 cut(s) 1154
EaeI YGGCCR 1 cut(s) 6
EagI CGGCCG 1 cut(s) 6
Eam1104I CTCTTC 3 cut(s) 213, 957, 999
EarI CTCTTC 3 cut(s) 213, 957, 999
Ecl136II GAGCTC 1 cut(s) 127
EclXI CGGCCG 1 cut(s) 6
Eco130I CCWWGG 1 cut(s) 435
Eco24I GRGCYC 1 cut(s) 129
Eco31I GGTCTC 1 cut(s) 19
Eco32I GATATC 1 cut(s) 1021
Eco47I GGWCC 3 cut(s) 246, 605, 694
Eco52I CGGCCG 1 cut(s) 6
Eco53kI GAGCTC 1 cut(s) 127
Eco57I CTGAAG 2 cut(s) 1086, 1136
Eco88I CYCGRG 2 cut(s) 198, 636
EcoICRI GAGCTC 1 cut(s) 127
EcoO109I RGGNCCY 1 cut(s) 246
EcoRII CCWGG 4 cut(s) 241, 408, 610, 961
EcoRV GATATC 1 cut(s) 1021
EcoT14I CCWWGG 1 cut(s) 435
EcoT38I GRGCYC 1 cut(s) 129
ErhI CCWWGG 1 cut(s) 435
FaeI CATG 6 cut(s) 487, 761, 781, 1144, 1172, 1237
FatI CATG 6 cut(s) 483, 757, 777, 1140, 1168, 1233
FauI CCCGC 1 cut(s) 1129
FauNDI CATATG 1 cut(s) 478
Fnu4HI GCNGC 4 cut(s) 6, 72, 75, 581
FokI GGATG 3 cut(s) 291, 534, 794
FriOI GRGCYC 1 cut(s) 129
Fsp4HI GCNGC 4 cut(s) 6, 72, 75, 581
FspBI CTAG 1 cut(s) 720
FspI TGCGCA 1 cut(s) 579
GlaI GCGC 2 cut(s) 134, 579
GluI GCNGC 4 cut(s) 6, 72, 75, 581
GsuI CTGGAG 2 cut(s) 95, 113
HaeII RGCGCY 1 cut(s) 136
HaeIII GGCC 2 cut(s) 8, 961
HapII CCGG 1 cut(s) 958
HgaI GACGC 1 cut(s) 882
HhaI GCGC 2 cut(s) 135, 580
Hin1I GRCGYC 1 cut(s) 893
Hin1II CATG 6 cut(s) 487, 761, 781, 1144, 1172, 1237
Hin6I GCGC 2 cut(s) 133, 578
HinP1I GCGC 2 cut(s) 133, 578
HincII GTYRAC 1 cut(s) 442
HindII GTYRAC 1 cut(s) 442
HinfI GANTC 7 cut(s) 470, 563, 815, 885, 1007, 1062, 1174
HpaI GTTAAC 1 cut(s) 442
HpaII CCGG 1 cut(s) 958
HphI GGTGA 2 cut(s) 269, 845
Hpy166II GTNNAC 2 cut(s) 442, 608
Hpy188I TCNGA 6 cut(s) 180, 215, 674, 688, 731, 1071
Hpy8I GTNNAC 2 cut(s) 442, 608
HpyAV CCTTC 7 cut(s) 83, 242, 454, 707, 960, 1111, 1198
HpyCH4III ACNGT 3 cut(s) 605, 662, 839
HpyCH4IV ACGT 2 cut(s) 60, 1012
HpyCH4V TGCA 7 cut(s) 57, 139, 761, 847, 1082, 1128, 1148
HpyF10VI GCNNNNNNNGC 3 cut(s) 141, 544, 1106
HpyF3I CTNAG 5 cut(s) 177, 212, 687, 1110, 1176
HpySE526I ACGT 2 cut(s) 60, 1012
Hsp92I GRCGYC 1 cut(s) 893
Hsp92II CATG 6 cut(s) 487, 761, 781, 1144, 1172, 1237
HspAI GCGC 2 cut(s) 133, 578
KspAI GTTAAC 1 cut(s) 442
Kzo9I GATC 3 cut(s) 430, 943, 1066
LguI GCTCTTC 1 cut(s) 957
LmnI GCTCC 4 cut(s) 68, 132, 234, 754
Lsp1109I GCAGC 1 cut(s) 592
LweI GCATC 3 cut(s) 124, 556, 1044
MabI ACCWGGT 1 cut(s) 408
MaeI CTAG 1 cut(s) 720
MaeII ACGT 2 cut(s) 60, 1012
MaeIII GTNAC 5 cut(s) 34, 222, 833, 1008, 1171
MalI GATC 3 cut(s) 432, 945, 1068
MbiI CCGCTC 1 cut(s) 71
MboI GATC 3 cut(s) 430, 943, 1066
MflI RGATCY 1 cut(s) 430
MhlI GDGCHC 1 cut(s) 129
MluCI AATT 6 cut(s) 193, 554, 573, 981, 986, 1048
MlyI GAGTC 4 cut(s) 464, 572, 1016, 1168
MseI TTAA 5 cut(s) 63, 96, 162, 297, 441
MslI CAYNNNNRTG 2 cut(s) 120, 776
MspI CCGG 1 cut(s) 958
MspR9I CCNGG 4 cut(s) 243, 410, 612, 963
Mva1269I GAATGC 1 cut(s) 213
MvaI CCWGG 4 cut(s) 243, 410, 612, 963
MvnI CGCG 1 cut(s) 144
MwoI GCNNNNNNNGC 3 cut(s) 141, 544, 1106
NdeI CATATG 1 cut(s) 478
NdeII GATC 3 cut(s) 430, 943, 1066
NlaIII CATG 6 cut(s) 487, 761, 781, 1144, 1172, 1237
NlaIV GGNNCC 2 cut(s) 247, 465
NmuCI GTSAC 4 cut(s) 34, 833, 1008, 1171
NsbI TGCGCA 1 cut(s) 579
NspI RCATGY 4 cut(s) 761, 1144, 1172, 1237
PaeI GCATGC 1 cut(s) 761
PaeR7I CTCGAG 1 cut(s) 198
PciI ACATGT 2 cut(s) 1168, 1233
PciSI GCTCTTC 1 cut(s) 957
PctI GAATGC 1 cut(s) 213
PfeI GAWTC 3 cut(s) 815, 885, 1062
PkrI GCNGC 4 cut(s) 7, 73, 76, 582
PleI GAGTC 4 cut(s) 464, 571, 1015, 1168
PpsI GAGTC 4 cut(s) 464, 571, 1015, 1168
PpuMI RGGWCCY 1 cut(s) 246
PscI ACATGT 2 cut(s) 1168, 1233
Psp124BI GAGCTC 1 cut(s) 129
Psp1406I AACGTT 1 cut(s) 60
Psp5II RGGWCCY 1 cut(s) 246
Psp6I CCWGG 4 cut(s) 241, 408, 610, 961
PspGI CCWGG 4 cut(s) 241, 408, 610, 961
PspN4I GGNNCC 2 cut(s) 247, 465
PspPI GGNCC 3 cut(s) 246, 605, 694
PspPPI RGGWCCY 1 cut(s) 246
PstNI CAGNNNCTG 2 cut(s) 136, 1109
PsuI RGATCY 1 cut(s) 430
RsaI GTAC 5 cut(s) 104, 204, 602, 664, 1167
RsaNI GTAC 5 cut(s) 103, 203, 601, 663, 1166
RseI CAYNNNNRTG 2 cut(s) 120, 776
SacI GAGCTC 1 cut(s) 129
SapI GCTCTTC 1 cut(s) 957
SaqAI TTAA 5 cut(s) 63, 96, 162, 297, 441
SatI GCNGC 4 cut(s) 6, 72, 75, 581
Sau3AI GATC 3 cut(s) 430, 943, 1066
Sau96I GGNCC 3 cut(s) 246, 605, 694
ScaI AGTACT 1 cut(s) 104
SchI GAGTC 4 cut(s) 464, 572, 1016, 1168
ScrFI CCNGG 4 cut(s) 243, 410, 612, 963
SduI GDGCHC 1 cut(s) 129
SexAI ACCWGGT 1 cut(s) 408
SfaNI GCATC 3 cut(s) 124, 556, 1044
Sfr274I CTCGAG 1 cut(s) 198
SinI GGWCC 3 cut(s) 246, 605, 694
SlaI CTCGAG 1 cut(s) 198
SmiMI CAYNNNNRTG 2 cut(s) 120, 776
SmlI CTYRAG 3 cut(s) 198, 860, 1036
SmoI CTYRAG 3 cut(s) 198, 860, 1036
SphI GCATGC 1 cut(s) 761
Sse9I AATT 6 cut(s) 193, 554, 573, 981, 986, 1048
SsiI CCGC 4 cut(s) 5, 71, 74, 1136
SspMI CTAG 1 cut(s) 720
SstI GAGCTC 1 cut(s) 129
StyD4I CCNGG 4 cut(s) 241, 408, 610, 961
StyI CCWWGG 1 cut(s) 435
TaaI ACNGT 3 cut(s) 605, 662, 839
TaiI ACGT 2 cut(s) 63, 1015
TaqI TCGA 6 cut(s) 120, 199, 327, 789, 888, 1065
TasI AATT 6 cut(s) 193, 554, 573, 981, 986, 1048
TatI WGTACW 3 cut(s) 102, 662, 1165
TauI GCSGC 3 cut(s) 8, 74, 77
TfiI GAWTC 3 cut(s) 815, 885, 1062
Tru1I TTAA 5 cut(s) 63, 96, 162, 297, 441
Tru9I TTAA 5 cut(s) 63, 96, 162, 297, 441
TscAI CASTG 2 cut(s) 661, 844
TseFI GTSAC 4 cut(s) 34, 833, 1008, 1171
TseI GCWGC 1 cut(s) 580
Tsp45I GTSAC 4 cut(s) 34, 833, 1008, 1171
TspGWI ACGGA 3 cut(s) 374, 897, 1145
TspRI CASTG 2 cut(s) 661, 844
VpaK11BI GGWCC 3 cut(s) 246, 605, 694
XapI RAATTY 2 cut(s) 986, 1048
XbaI TCTAGA 1 cut(s) 719
XceI RCATGY 4 cut(s) 761, 1144, 1172, 1237
XcmI CCANNNNNNNNNTGG 1 cut(s) 704
XhoI CTCGAG 1 cut(s) 198
XspI CTAG 1 cut(s) 720
ZrmI AGTACT 1 cut(s) 104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.