RLG00000016031

Belongs to the AAA ATPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0012336
Physical Location & Seq
Reverse (-)
3329637 .. 3332998
3362 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016031

Sequence Viewer

Length: 1296 bp
ATGGCTGCTGTCGGCGTCGAGACCAAGCCCGTCGAGGCCGTGCCCGAGGACACCTGCTACGCCAAGCTCGCCGCCTCCAAACTCGGTGAGGGGCTCCGCCCTTACTATCTCCAACACATTCACGAGCTCCAGCTTCAGGTCCGCCAGAAGACCCACAATCTCAATCGACTCGAGGCTCAGCGGAACGAGCTCAATTCCAGAGGTGCGCTTCTATTTCTAATTGAAAGTTCAATTTTTCGAATCCCTAACCCTTACCCTAGTAATTGGTTCTGGAAATTTTCAATTCGACTGTTTAGGGTTGTCAACGTCATGGGAAAGAACAAGGTTTTGGTTAAGGTTCATCCGGAAGGGAAGTATGTGGTTGATATTGATAAGAACATTGATATCACAAAGATCACACCATCTACAAGAGTGGCTCTACGCAATGACAGCTATGTTCTTCATTTAGTGCTGCCAAGCAAAGTAGATCCTCTCGTCAATCTGATGAAAGTGGAAAAGGTTCCAGATTCTACATATGATATGATTGGTGGTCTGGATCAGCAGATTAAAGAAATCAAAGAGGTCATTGAACTTCCAATTAAACATCCTGAATTGTTTGAAAGTCTTGGAATAGCTCAGCCAAAGGGAGTCCTGCTTTATGGTCCCCCCGGCACTGGCAAAACCTTGTTGGCTAGGGCTGTGGCTCATCACACTGACTGTACTTTCATCAGGGTTTCTGGTTCAGAGTTGGTTCAGAAATACATTGGGGAAGGTTCCCGAATGGTTAGAGAACTTTTCGTAATGGCCAGGGAACATGCTCCATCTATCATTTTTATGGATGAAATCGATAGTATTGGATCTGCTCGCATGGAATCTGGCAGTGGCAATGGGGACAGCGAGGTGCAGAGGACTATGCTTGAGCTTCTTAACCAACTGGATGGATTTGAGGCCTCAAACAAAATCAAGGTTTTGATGGCAACAAATCGTATTGATATTCTGGATCAAGCCCTGCTGAGGCCAGGACGCATAGACAGAAAGATCGAATTTCCCAACCCTAACGAAGAGTCTCGTTGGGACATTCTGAAAATCCATTCAAGAAGAATGAATTTAATGCGTGGAATTGACCTGAAGAAGATTGCGGAGAAAATGAACGGCGCCTCTGGCGCTGAGTTGAAGGCTGTTTGCACTGAAGCAGGAATGTTTGCACTGAGGGAGAGGAGAGTGCATGTAACCCAAGAAGACTTTGAGATGGCAGTTGCCAAGGTTATGAAGAAGGAGACGGAGAAGAATATGTCCCTGCGTAAGCTGTGGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000502 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006355 GO:0006357 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0008134 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010243 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017025 GO:0017111 GO:0019219 GO:0019222 GO:0019538 GO:0019941 GO:0030162 GO:0030163 GO:0030433 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031331 GO:0031334 GO:0031595 GO:0031597 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033554 GO:0034976 GO:0036402 GO:0036503 GO:0042176 GO:0042221 GO:0042623 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043632 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0045893 GO:0045898 GO:0045899 GO:0045935 GO:0045944 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051603 GO:0051716 GO:0060255 GO:0060260 GO:0060261 GO:0061136 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901800 GO:1902494 GO:1902680 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1903506 GO:1903508 GO:1905368 GO:1905369 GO:2000112 GO:2000142 GO:2000144 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03050 ko05169 map03050 map05169
Pfam Domains
Protein Families
AAA

Protein Analysis

432

Amino Acids

48.85

Weight (kDa)

9.14

Isoelectric Point (pI)

40.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Prot_ATP_ID_OB_C PF16450 99 - 152 1.2e-11 Proteasomal ATPase OB C-terminal domain
AAA PF00004 210 - 343 5.7e-44 ATPase family associated with various cellular activities (AAA)
AAA_lid_PRS2_C PF23902 348 - 417 1e-05 PRS2 AAA+ lid C-terminal domain
AAA_lid_3 PF17862 367 - 409 1.6e-14 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012336)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G19990 AT5G19990 AT5G19990 AT5G20000
fragaria_vesca FvH4_1g03980
malus_domestica MD02G1226600.v1.1 MD07G1087400.v1.1
prunus_persica Prupe.7G237100_v2.0.a1
pyrus_communis pycom02g19560
rosa_chinensis RchiOBHm_Chr2g0089461
rosa_laevigata RLG00000016031
rosa_multiflora Rmu_sc0000197.1_g000006
rosa_roxburghii Rroxscaffold_2G00151910 Rroxscaffold_6G00403280
rosa_rugosa Rorug02G0001000
rosa_samantha Rh2AG046200 Rh2CG046600 Rh2DG046200
rosa_wichuraiana Rw2G003640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 62
Acc36I ACCTGC 1 cut(s) 62
AccB1I GGYRCC 1 cut(s) 1133
AccIII TCCGGA 1 cut(s) 343
AciI CCGC 5 cut(s) 72, 97, 142, 181, 1118
AclWI GGATC 4 cut(s) 461, 543, 844, 987
AcoI YGGCCR 1 cut(s) 783
AcsI RAATTY 3 cut(s) 275, 1022, 1084
AcuI CTGAAG 3 cut(s) 119, 1127, 1188
AcyI GRCGYC 2 cut(s) 15, 1134
AfaI GTAC 1 cut(s) 700
AfiI CCNNNNNNNGG 3 cut(s) 136, 653, 993
AgsI TTSAA 7 cut(s) 224, 231, 282, 569, 599, 1074, 1153
AjnI CCWGG 2 cut(s) 785, 997
AjuI GAANNNNNNNTTGG 2 cut(s) 311, 343
AluBI AGCT 8 cut(s) 67, 127, 133, 190, 432, 614, 901, 1285
AluI AGCT 8 cut(s) 67, 127, 133, 190, 432, 614, 901, 1285
Alw21I GWGCWC 2 cut(s) 129, 192
Alw26I GTCTC 3 cut(s) 14, 1050, 1250
AlwI GGATC 4 cut(s) 461, 543, 844, 987
Ama87I CYCGRG 2 cut(s) 44, 170
Aor13HI TCCGGA 1 cut(s) 343
AoxI GGCC 4 cut(s) 36, 783, 927, 995
ApeKI GCWGC 2 cut(s) 5, 451
ApoI RAATTY 3 cut(s) 275, 1022, 1084
Asp700I GAANNNNTTC 1 cut(s) 498
AspLEI GCGC 3 cut(s) 208, 1136, 1145
AspS9I GGNCC 2 cut(s) 139, 641
AsuC2I CCSGG 1 cut(s) 648
AsuHPI GGTGA 1 cut(s) 98
AsuII TTCGAA 1 cut(s) 238
AvaI CYCGRG 2 cut(s) 44, 170
AvaII GGWCC 2 cut(s) 139, 641
BaeGI GKGCMC 1 cut(s) 45
BalI TGGCCA 1 cut(s) 785
BanI GGYRCC 1 cut(s) 1133
BanII GRGCYC 3 cut(s) 96, 129, 192
BauI CACGAG 1 cut(s) 122
BbsI GAAGAC 2 cut(s) 155, 1224
Bbv12I GWGCWC 2 cut(s) 129, 192
BbvCI CCTCAGC 1 cut(s) 992
BbvI GCAGC 1 cut(s) 438
BccI CCATC 5 cut(s) 409, 808, 911, 946, 1222
BceAI ACGGC 2 cut(s) 23, 1147
BciT130I CCWGG 2 cut(s) 787, 999
BcnI CCSGG 1 cut(s) 648
BcoDI GTCTC 3 cut(s) 14, 1050, 1250
BfaI CTAG 2 cut(s) 258, 672
BfoI RGCGCY 2 cut(s) 1137, 1146
BfuAI ACCTGC 1 cut(s) 62
BisI GCNGC 3 cut(s) 6, 72, 452
BlpI GCTNAGC 2 cut(s) 177, 615
BlsI GCNGC 3 cut(s) 7, 73, 453
Bme1390I CCNGG 3 cut(s) 648, 787, 999
Bme18I GGWCC 2 cut(s) 139, 641
BmeT110I CYCGRG 2 cut(s) 44, 170
BmgT120I GGNCC 2 cut(s) 139, 641
BmiI GGNNCC 5 cut(s) 95, 501, 643, 754, 1135
BmrFI CCNGG 3 cut(s) 648, 787, 999
BpiI GAAGAC 2 cut(s) 155, 1224
BpmI CTGGAG 1 cut(s) 113
Bpu10I CCTNAGC 1 cut(s) 992
Bpu1102I GCTNAGC 2 cut(s) 177, 615
Bpu14I TTCGAA 1 cut(s) 238
BpuEI CTTGAG 1 cut(s) 917
BpuMI CCSGG 1 cut(s) 648
Bsa29I ATCGAT 1 cut(s) 825
BsaHI GRCGYC 2 cut(s) 15, 1134
BsaI GGTCTC 1 cut(s) 14
BsaJI CCNNGG 4 cut(s) 45, 646, 786, 1239
BsaWI WCCGGW 1 cut(s) 343
Bsc4I CCNNNNNNNGG 3 cut(s) 136, 653, 993
Bse1I ACTGG 2 cut(s) 658, 918
Bse3DI GCAATG 2 cut(s) 430, 871
BseAI TCCGGA 1 cut(s) 343
BseBI CCWGG 2 cut(s) 787, 999
BseCI ATCGAT 1 cut(s) 825
BseDI CCNNGG 4 cut(s) 45, 646, 786, 1239
BseGI GGATG 4 cut(s) 340, 583, 823, 922
BseLI CCNNNNNNNGG 3 cut(s) 136, 653, 993
BseMI GCAATG 2 cut(s) 430, 871
BseMII CTCAG 5 cut(s) 191, 629, 983, 1137, 1178
BseNI ACTGG 2 cut(s) 658, 918
BseRI GAGGAG 1 cut(s) 1210
BseSI GKGCMC 1 cut(s) 45
BseXI GCAGC 1 cut(s) 438
BsgI GTGCAG 1 cut(s) 902
BshFI GGCC 4 cut(s) 38, 785, 929, 997
BshNI GGYRCC 1 cut(s) 1133
BshVI ATCGAT 1 cut(s) 825
BsiHKAI GWGCWC 2 cut(s) 129, 192
BsiHKCI CYCGRG 2 cut(s) 44, 170
BsiSI CCGG 2 cut(s) 344, 648
BslFI GGGAC 4 cut(s) 627, 884, 1067, 1258
BslI CCNNNNNNNGG 3 cut(s) 136, 653, 993
BsmAI GTCTC 3 cut(s) 14, 1050, 1250
BsmBI CGTCTC 1 cut(s) 1250
BsmFI GGGAC 4 cut(s) 627, 884, 1067, 1258
BsnI GGCC 4 cut(s) 38, 785, 929, 997
Bso31I GGTCTC 1 cut(s) 14
BsoBI CYCGRG 2 cut(s) 44, 170
Bsp119I TTCGAA 1 cut(s) 238
Bsp1286I GDGCHC 4 cut(s) 45, 96, 129, 192
Bsp13I TCCGGA 1 cut(s) 343
Bsp143I GATC 6 cut(s) 393, 466, 535, 836, 979, 1017
Bsp1720I GCTNAGC 2 cut(s) 177, 615
BspACI CCGC 5 cut(s) 72, 97, 142, 181, 1118
BspANI GGCC 4 cut(s) 38, 785, 929, 997
BspCNI CTCAG 5 cut(s) 190, 628, 984, 1138, 1179
BspDI ATCGAT 1 cut(s) 825
BspEI TCCGGA 1 cut(s) 343
BspLI GGNNCC 5 cut(s) 95, 501, 643, 754, 1135
BspMI ACCTGC 1 cut(s) 62
BspPI GGATC 4 cut(s) 461, 543, 844, 987
BspT104I TTCGAA 1 cut(s) 238
BspT107I GGYRCC 1 cut(s) 1133
BspTNI GGTCTC 1 cut(s) 14
BsrDI GCAATG 2 cut(s) 430, 871
BsrI ACTGG 2 cut(s) 658, 918
BssECI CCNNGG 4 cut(s) 45, 646, 786, 1239
BssMI GATC 6 cut(s) 393, 466, 535, 836, 979, 1017
BssNI GRCGYC 2 cut(s) 15, 1134
BssSI CACGAG 1 cut(s) 122
BssT1I CCWWGG 1 cut(s) 1239
Bst2BI CACGAG 1 cut(s) 122
Bst2UI CCWGG 2 cut(s) 787, 999
Bst4CI ACNGT 2 cut(s) 291, 698
Bst6I CTCTTC 1 cut(s) 1035
BstACI GRCGYC 2 cut(s) 15, 1134
BstBI TTCGAA 1 cut(s) 238
BstC8I GCNNGC 2 cut(s) 69, 844
BstDEI CTNAG 5 cut(s) 177, 615, 992, 1146, 1187
BstF5I GGATG 4 cut(s) 340, 583, 823, 922
BstH2I RGCGCY 2 cut(s) 1137, 1146
BstHHI GCGC 3 cut(s) 208, 1136, 1145
BstKTI GATC 6 cut(s) 396, 469, 538, 839, 982, 1020
BstMAI GTCTC 3 cut(s) 14, 1050, 1250
BstMBI GATC 6 cut(s) 393, 466, 535, 836, 979, 1017
BstMWI GCNNNNNNNGC 5 cut(s) 68, 187, 429, 1140, 1142
BstNI CCWGG 2 cut(s) 787, 999
BstNSI RCATGY 2 cut(s) 797, 1208
BstSCI CCNGG 3 cut(s) 646, 785, 997
BstSLI GKGCMC 1 cut(s) 45
BstV1I GCAGC 1 cut(s) 438
BstV2I GAAGAC 2 cut(s) 155, 1224
BstX2I RGATCY 2 cut(s) 466, 836
BstXI CCANNNNNNTGG 1 cut(s) 917
BstYI RGATCY 2 cut(s) 466, 836
Bsu15I ATCGAT 1 cut(s) 825
BsuRI GGCC 4 cut(s) 38, 785, 929, 997
BsuTUI ATCGAT 1 cut(s) 825
BtsCI GGATG 4 cut(s) 340, 583, 823, 922
BtsI GCAGTG 1 cut(s) 865
BtsIMutI CAGTG 5 cut(s) 651, 690, 865, 1164, 1184
BveI ACCTGC 1 cut(s) 62
Cac8I GCNNGC 2 cut(s) 69, 844
CfoI GCGC 3 cut(s) 208, 1136, 1145
Cfr13I GGNCC 2 cut(s) 139, 641
ClaI ATCGAT 1 cut(s) 825
CseI GACGC 2 cut(s) 4, 1011
Csp6I GTAC 1 cut(s) 699
CviAII CATG 4 cut(s) 310, 794, 847, 1205
CviQI GTAC 1 cut(s) 699
DdeI CTNAG 5 cut(s) 177, 615, 992, 1146, 1187
DinI GGCGCC 1 cut(s) 1135
DpnI GATC 6 cut(s) 395, 468, 537, 838, 981, 1019
DpnII GATC 6 cut(s) 393, 466, 535, 836, 979, 1017
EaeI YGGCCR 1 cut(s) 783
Eam1104I CTCTTC 1 cut(s) 1035
EarI CTCTTC 1 cut(s) 1035
EciI GGCGGA 2 cut(s) 86, 131
Ecl136II GAGCTC 2 cut(s) 127, 190
Eco130I CCWWGG 1 cut(s) 1239
Eco147I AGGCCT 1 cut(s) 929
Eco24I GRGCYC 3 cut(s) 96, 129, 192
Eco31I GGTCTC 1 cut(s) 14
Eco32I GATATC 1 cut(s) 385
Eco47I GGWCC 2 cut(s) 139, 641
Eco53kI GAGCTC 2 cut(s) 127, 190
Eco57I CTGAAG 3 cut(s) 119, 1127, 1188
Eco88I CYCGRG 2 cut(s) 44, 170
EcoICRI GAGCTC 2 cut(s) 127, 190
EcoRII CCWGG 2 cut(s) 785, 997
EcoRV GATATC 1 cut(s) 385
EcoT14I CCWWGG 1 cut(s) 1239
EcoT38I GRGCYC 3 cut(s) 96, 129, 192
EgeI GGCGCC 1 cut(s) 1135
EheI GGCGCC 1 cut(s) 1135
ErhI CCWWGG 1 cut(s) 1239
Esp3I CGTCTC 1 cut(s) 1250
FaeI CATG 4 cut(s) 313, 797, 850, 1208
FaqI GGGAC 4 cut(s) 627, 884, 1067, 1258
FatI CATG 4 cut(s) 309, 793, 846, 1204
FauNDI CATATG 1 cut(s) 514
Fnu4HI GCNGC 3 cut(s) 6, 72, 452
FokI GGATG 4 cut(s) 327, 570, 830, 929
FriOI GRGCYC 3 cut(s) 96, 129, 192
Fsp4HI GCNGC 3 cut(s) 6, 72, 452
FspBI CTAG 2 cut(s) 258, 672
GlaI GCGC 3 cut(s) 207, 1135, 1144
GluI GCNGC 3 cut(s) 6, 72, 452
GsuI CTGGAG 1 cut(s) 113
HaeII RGCGCY 2 cut(s) 1137, 1146
HaeIII GGCC 4 cut(s) 38, 785, 929, 997
HapII CCGG 2 cut(s) 344, 648
HgaI GACGC 2 cut(s) 4, 1011
HhaI GCGC 3 cut(s) 208, 1136, 1145
Hin1I GRCGYC 2 cut(s) 15, 1134
Hin1II CATG 4 cut(s) 313, 797, 850, 1208
Hin6I GCGC 3 cut(s) 206, 1134, 1143
HinP1I GCGC 3 cut(s) 206, 1134, 1143
HincII GTYRAC 1 cut(s) 304
HindII GTYRAC 1 cut(s) 304
HinfI GANTC 6 cut(s) 168, 240, 506, 627, 851, 1043
HpaII CCGG 2 cut(s) 344, 648
HphI GGTGA 1 cut(s) 98
Hpy166II GTNNAC 1 cut(s) 304
Hpy188I TCNGA 4 cut(s) 483, 724, 735, 1062
Hpy8I GTNNAC 1 cut(s) 304
Hpy99I CGWCG 2 cut(s) 20, 35
HpyAV CCTTC 4 cut(s) 341, 743, 1147, 1246
HpyCH4III ACNGT 2 cut(s) 291, 698
HpyCH4IV ACGT 1 cut(s) 306
HpyCH4V TGCA 4 cut(s) 883, 1164, 1184, 1204
HpyF10VI GCNNNNNNNGC 5 cut(s) 68, 187, 429, 1140, 1142
HpyF3I CTNAG 5 cut(s) 177, 615, 992, 1146, 1187
HpySE526I ACGT 1 cut(s) 306
Hsp92I GRCGYC 2 cut(s) 15, 1134
Hsp92II CATG 4 cut(s) 313, 797, 850, 1208
HspAI GCGC 3 cut(s) 206, 1134, 1143
KasI GGCGCC 1 cut(s) 1133
Kpn2I TCCGGA 1 cut(s) 343
Kzo9I GATC 6 cut(s) 393, 466, 535, 836, 979, 1017
LmnI GCTCC 3 cut(s) 99, 132, 802
Lsp1109I GCAGC 1 cut(s) 438
MaeI CTAG 2 cut(s) 258, 672
MaeII ACGT 1 cut(s) 306
MaeIII GTNAC 1 cut(s) 1207
MalI GATC 6 cut(s) 395, 468, 537, 838, 981, 1019
MboI GATC 6 cut(s) 393, 466, 535, 836, 979, 1017
MboII GAAGA 9 cut(s) 160, 431, 1052, 1089, 1120, 1123, 1229, 1261, 1276
MflI RGATCY 2 cut(s) 466, 836
MhlI GDGCHC 4 cut(s) 45, 96, 129, 192
MlsI TGGCCA 1 cut(s) 785
MluNI TGGCCA 1 cut(s) 785
Mly113I GGCGCC 1 cut(s) 1134
MlyI GAGTC 3 cut(s) 162, 636, 1052
MmeI TCCRAC 1 cut(s) 136
Mox20I TGGCCA 1 cut(s) 785
MroI TCCGGA 1 cut(s) 343
MroXI GAANNNNTTC 1 cut(s) 498
MscI TGGCCA 1 cut(s) 785
MseI TTAA 5 cut(s) 333, 546, 579, 906, 1088
MslI CAYNNNNRTG 1 cut(s) 812
Msp20I TGGCCA 1 cut(s) 785
MspA1I CMGCKG 1 cut(s) 181
MspI CCGG 2 cut(s) 344, 648
MspR9I CCNGG 3 cut(s) 648, 787, 999
MvaI CCWGG 2 cut(s) 787, 999
MwoI GCNNNNNNNGC 5 cut(s) 68, 187, 429, 1140, 1142
NarI GGCGCC 1 cut(s) 1134
NciI CCSGG 1 cut(s) 648
NdeI CATATG 1 cut(s) 514
NdeII GATC 6 cut(s) 393, 466, 535, 836, 979, 1017
NlaIII CATG 4 cut(s) 313, 797, 850, 1208
NlaIV GGNNCC 5 cut(s) 95, 501, 643, 754, 1135
NspI RCATGY 2 cut(s) 797, 1208
NspV TTCGAA 1 cut(s) 238
PaeR7I CTCGAG 1 cut(s) 170
PaqCI CACCTGC 1 cut(s) 62
PceI AGGCCT 1 cut(s) 929
PdmI GAANNNNTTC 1 cut(s) 498
PfeI GAWTC 3 cut(s) 240, 506, 851
PkrI GCNGC 3 cut(s) 7, 73, 453
PleI GAGTC 3 cut(s) 162, 635, 1051
PluTI GGCGCC 1 cut(s) 1137
PpsI GAGTC 3 cut(s) 162, 635, 1051
Psp124BI GAGCTC 2 cut(s) 129, 192
Psp6I CCWGG 2 cut(s) 785, 997
PspGI CCWGG 2 cut(s) 785, 997
PspN4I GGNNCC 5 cut(s) 95, 501, 643, 754, 1135
PspPI GGNCC 2 cut(s) 139, 641
PspXI VCTCGAGB 1 cut(s) 170
PsuI RGATCY 2 cut(s) 466, 836
RsaI GTAC 1 cut(s) 700
RsaNI GTAC 1 cut(s) 699
RseI CAYNNNNRTG 1 cut(s) 812
SacI GAGCTC 2 cut(s) 129, 192
SaqAI TTAA 5 cut(s) 333, 546, 579, 906, 1088
SatI GCNGC 3 cut(s) 6, 72, 452
Sau3AI GATC 6 cut(s) 393, 466, 535, 836, 979, 1017
Sau96I GGNCC 2 cut(s) 139, 641
SchI GAGTC 3 cut(s) 162, 636, 1052
ScrFI CCNGG 3 cut(s) 648, 787, 999
SduI GDGCHC 4 cut(s) 45, 96, 129, 192
SfoI GGCGCC 1 cut(s) 1135
Sfr274I CTCGAG 1 cut(s) 170
SfuI TTCGAA 1 cut(s) 238
SinI GGWCC 2 cut(s) 139, 641
SlaI CTCGAG 1 cut(s) 170
SmiMI CAYNNNNRTG 1 cut(s) 812
SmlI CTYRAG 2 cut(s) 170, 896
SmoI CTYRAG 2 cut(s) 170, 896
SseBI AGGCCT 1 cut(s) 929
SsiI CCGC 5 cut(s) 72, 97, 142, 181, 1118
SspDI GGCGCC 1 cut(s) 1133
SspMI CTAG 2 cut(s) 258, 672
SstI GAGCTC 2 cut(s) 129, 192
StuI AGGCCT 1 cut(s) 929
StyD4I CCNGG 3 cut(s) 646, 785, 997
StyI CCWWGG 1 cut(s) 1239
TaaI ACNGT 2 cut(s) 291, 698
TaiI ACGT 1 cut(s) 309
TaqI TCGA 8 cut(s) 18, 33, 166, 171, 238, 286, 825, 1020
TatI WGTACW 1 cut(s) 698
TauI GCSGC 1 cut(s) 74
TfiI GAWTC 3 cut(s) 240, 506, 851
Tru1I TTAA 5 cut(s) 333, 546, 579, 906, 1088
Tru9I TTAA 5 cut(s) 333, 546, 579, 906, 1088
TscAI CASTG 5 cut(s) 658, 697, 865, 1171, 1191
TseI GCWGC 2 cut(s) 5, 451
TspDTI ATGAA 8 cut(s) 329, 431, 500, 694, 834, 1097, 1142, 1262
TspGWI ACGGA 1 cut(s) 1274
TspRI CASTG 5 cut(s) 658, 697, 865, 1171, 1191
VpaK11BI GGWCC 2 cut(s) 139, 641
XapI RAATTY 3 cut(s) 275, 1022, 1084
XceI RCATGY 2 cut(s) 797, 1208
XhoI CTCGAG 1 cut(s) 170
XmnI GAANNNNTTC 1 cut(s) 498
XspI CTAG 2 cut(s) 258, 672
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.