zinc finger (C3HC4-type RING finger) family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G43430 AT5G20885 |
| fragaria_vesca | FvH4_1g09671 |
| malus_domestica | MD15G1225600.v1.1 |
| prunus_persica | Prupe.7G189400_v2.0.a1 |
| pyrus_communis | pycom15g20050 |
| rosa_chinensis | RchiOBHm_Chr2g0096531 |
| rosa_multiflora | Rmu_sc0004096.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00145560 |
| rosa_rugosa | Rorug02G0058300 |
| rosa_samantha | Rh2AG105400 Rh2BG107700 Rh2CG109500 Rh2DG108500 |
| rosa_wichuraiana | Rw2G008150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 251 |
| AatII | GACGTC | 1 cut(s) | 446 |
| Acc36I | ACCTGC | 1 cut(s) | 251 |
| AciI | CCGC | 3 cut(s) | 144, 357, 422 |
| AclWI | GGATC | 6 cut(s) | 79, 92, 104, 105, 111, 117 |
| AcoI | YGGCCR | 1 cut(s) | 458 |
| AcyI | GRCGYC | 1 cut(s) | 443 |
| AfaI | GTAC | 1 cut(s) | 400 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 340, 492 |
| AflIII | ACRYGT | 1 cut(s) | 401 |
| AgeI | ACCGGT | 1 cut(s) | 333 |
| AgsI | TTSAA | 1 cut(s) | 491 |
| AjiI | CACGTC | 1 cut(s) | 526 |
| AluBI | AGCT | 4 cut(s) | 6, 43, 212, 480 |
| AluI | AGCT | 4 cut(s) | 6, 43, 212, 480 |
| Alw26I | GTCTC | 2 cut(s) | 32, 260 |
| AlwI | GGATC | 6 cut(s) | 79, 92, 104, 105, 111, 117 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 300 |
| AoxI | GGCC | 2 cut(s) | 458, 483 |
| ApeKI | GCWGC | 2 cut(s) | 209, 431 |
| AsiGI | ACCGGT | 1 cut(s) | 333 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 495 |
| AspLEI | GCGC | 1 cut(s) | 248 |
| AspS9I | GGNCC | 1 cut(s) | 483 |
| AsuHPI | GGTGA | 6 cut(s) | 61, 308, 374, 386, 392, 464 |
| BamHI | GGATCC | 1 cut(s) | 84 |
| BbvI | GCAGC | 2 cut(s) | 221, 418 |
| BccI | CCATC | 2 cut(s) | 75, 266 |
| BceAI | ACGGC | 2 cut(s) | 470, 509 |
| BclI | TGATCA | 1 cut(s) | 231 |
| BcoDI | GTCTC | 2 cut(s) | 32, 260 |
| BfaI | CTAG | 1 cut(s) | 477 |
| BfmI | CTRYAG | 1 cut(s) | 301 |
| BfuAI | ACCTGC | 1 cut(s) | 251 |
| BglII | AGATCT | 2 cut(s) | 218, 262 |
| BisI | GCNGC | 2 cut(s) | 210, 432 |
| BlsI | GCNGC | 2 cut(s) | 211, 433 |
| BmgBI | CACGTC | 1 cut(s) | 526 |
| BmgT120I | GGNCC | 1 cut(s) | 483 |
| BmiI | GGNNCC | 1 cut(s) | 86 |
| BpuEI | CTTGAG | 1 cut(s) | 97 |
| BsaAI | YACGTR | 1 cut(s) | 402 |
| BsaBI | GATNNNNATC | 2 cut(s) | 115, 121 |
| BsaHI | GRCGYC | 1 cut(s) | 443 |
| BsaI | GGTCTC | 1 cut(s) | 32 |
| BsaWI | WCCGGW | 1 cut(s) | 333 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 267, 297 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 340, 492 |
| Bse118I | RCCGGY | 1 cut(s) | 333 |
| Bse8I | GATNNNNATC | 2 cut(s) | 115, 121 |
| BseJI | GATNNNNATC | 2 cut(s) | 115, 121 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 340, 492 |
| BseMII | CTCAG | 3 cut(s) | 53, 204, 307 |
| BseRI | GAGGAG | 1 cut(s) | 398 |
| BseXI | GCAGC | 2 cut(s) | 221, 418 |
| BseYI | CCCAGC | 1 cut(s) | 480 |
| BshFI | GGCC | 2 cut(s) | 460, 485 |
| BshTI | ACCGGT | 1 cut(s) | 333 |
| BsiSI | CCGG | 2 cut(s) | 224, 334 |
| BsiWI | CGTACG | 1 cut(s) | 398 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 340, 492 |
| BsmAI | GTCTC | 2 cut(s) | 32, 260 |
| BsnI | GGCC | 2 cut(s) | 460, 485 |
| Bso31I | GGTCTC | 1 cut(s) | 32 |
| BspACI | CCGC | 3 cut(s) | 144, 357, 422 |
| BspANI | GGCC | 2 cut(s) | 460, 485 |
| BspCNI | CTCAG | 3 cut(s) | 52, 205, 306 |
| BspLI | GGNNCC | 1 cut(s) | 86 |
| BspMI | ACCTGC | 1 cut(s) | 251 |
| BspPI | GGATC | 6 cut(s) | 79, 92, 104, 105, 111, 117 |
| BspTNI | GGTCTC | 1 cut(s) | 32 |
| BsrFI | RCCGGY | 1 cut(s) | 333 |
| BssAI | RCCGGY | 1 cut(s) | 333 |
| BssNI | GRCGYC | 1 cut(s) | 443 |
| Bst4CI | ACNGT | 4 cut(s) | 73, 302, 320, 398 |
| Bst6I | CTCTTC | 2 cut(s) | 136, 512 |
| BstACI | GRCGYC | 1 cut(s) | 443 |
| BstBAI | YACGTR | 1 cut(s) | 402 |
| BstDEI | CTNAG | 3 cut(s) | 39, 213, 293 |
| BstHHI | GCGC | 1 cut(s) | 248 |
| BstMAI | GTCTC | 2 cut(s) | 32, 260 |
| BstSFI | CTRYAG | 1 cut(s) | 301 |
| BstV1I | GCAGC | 2 cut(s) | 221, 418 |
| BstX2I | RGATCY | 6 cut(s) | 84, 96, 116, 122, 218, 262 |
| BstYI | RGATCY | 6 cut(s) | 84, 96, 116, 122, 218, 262 |
| BsuRI | GGCC | 2 cut(s) | 460, 485 |
| BtgZI | GCGATG | 1 cut(s) | 242 |
| BtrI | CACGTC | 1 cut(s) | 526 |
| BveI | ACCTGC | 1 cut(s) | 251 |
| CaiI | CAGNNNCTG | 1 cut(s) | 300 |
| CfoI | GCGC | 1 cut(s) | 248 |
| Cfr10I | RCCGGY | 1 cut(s) | 333 |
| Cfr13I | GGNCC | 1 cut(s) | 483 |
| CseI | GACGC | 1 cut(s) | 215 |
| Csp6I | GTAC | 1 cut(s) | 399 |
| CspAI | ACCGGT | 1 cut(s) | 333 |
| CviQI | GTAC | 1 cut(s) | 399 |
| DdeI | CTNAG | 3 cut(s) | 39, 213, 293 |
| EaeI | YGGCCR | 1 cut(s) | 458 |
| Eam1104I | CTCTTC | 2 cut(s) | 136, 512 |
| EarI | CTCTTC | 2 cut(s) | 136, 512 |
| EciI | GGCGGA | 1 cut(s) | 133 |
| Eco31I | GGTCTC | 1 cut(s) | 32 |
| FaiI | YATR | 4 cut(s) | 32, 309, 311, 348 |
| FauNDI | CATATG | 1 cut(s) | 309 |
| FbaI | TGATCA | 1 cut(s) | 231 |
| Fnu4HI | GCNGC | 2 cut(s) | 210, 432 |
| Fsp4HI | GCNGC | 2 cut(s) | 210, 432 |
| FspBI | CTAG | 1 cut(s) | 477 |
| GlaI | GCGC | 1 cut(s) | 247 |
| GluI | GCNGC | 2 cut(s) | 210, 432 |
| GsaI | CCCAGC | 1 cut(s) | 484 |
| HaeIII | GGCC | 2 cut(s) | 460, 485 |
| HapII | CCGG | 2 cut(s) | 224, 334 |
| HgaI | GACGC | 1 cut(s) | 215 |
| HhaI | GCGC | 1 cut(s) | 248 |
| Hin1I | GRCGYC | 1 cut(s) | 443 |
| Hin6I | GCGC | 1 cut(s) | 246 |
| HinP1I | GCGC | 1 cut(s) | 246 |
| HinfI | GANTC | 1 cut(s) | 20 |
| HpaII | CCGG | 2 cut(s) | 224, 334 |
| HphI | GGTGA | 6 cut(s) | 61, 308, 374, 386, 392, 464 |
| Hpy188I | TCNGA | 3 cut(s) | 260, 512, 530 |
| Hpy188III | TCNNGA | 5 cut(s) | 76, 114, 120, 266, 295 |
| Hpy99I | CGWCG | 4 cut(s) | 199, 445, 448, 466 |
| HpyAV | CCTTC | 2 cut(s) | 162, 371 |
| HpyCH4III | ACNGT | 4 cut(s) | 73, 302, 320, 398 |
| HpyCH4IV | ACGT | 4 cut(s) | 197, 401, 443, 525 |
| HpyF3I | CTNAG | 3 cut(s) | 39, 213, 293 |
| HpySE526I | ACGT | 4 cut(s) | 197, 401, 443, 525 |
| Hsp92I | GRCGYC | 1 cut(s) | 443 |
| HspAI | GCGC | 1 cut(s) | 246 |
| Ksp22I | TGATCA | 1 cut(s) | 231 |
| Lsp1109I | GCAGC | 2 cut(s) | 221, 418 |
| MaeI | CTAG | 1 cut(s) | 477 |
| MaeII | ACGT | 4 cut(s) | 197, 401, 443, 525 |
| MaeIII | GTNAC | 3 cut(s) | 34, 190, 203 |
| MboII | GAAGA | 7 cut(s) | 29, 123, 126, 281, 478, 499, 512 |
| MflI | RGATCY | 6 cut(s) | 84, 96, 116, 122, 218, 262 |
| MmeI | TCCRAC | 1 cut(s) | 321 |
| MnlI | CCTC | 9 cut(s) | 98, 139, 172, 194, 274, 376, 379, 417, 515 |
| MroXI | GAANNNNTTC | 1 cut(s) | 495 |
| MspA1I | CMGCKG | 1 cut(s) | 212 |
| MspI | CCGG | 2 cut(s) | 224, 334 |
| NdeI | CATATG | 1 cut(s) | 309 |
| NlaIV | GGNNCC | 1 cut(s) | 86 |
| NmuCI | GTSAC | 3 cut(s) | 34, 190, 203 |
| PaqCI | CACCTGC | 1 cut(s) | 251 |
| PdmI | GAANNNNTTC | 1 cut(s) | 495 |
| PfeI | GAWTC | 1 cut(s) | 20 |
| Pfl23II | CGTACG | 1 cut(s) | 398 |
| PinAI | ACCGGT | 1 cut(s) | 333 |
| PkrI | GCNGC | 2 cut(s) | 211, 433 |
| Ppu21I | YACGTR | 1 cut(s) | 402 |
| PspFI | CCCAGC | 1 cut(s) | 480 |
| PspLI | CGTACG | 1 cut(s) | 398 |
| PspN4I | GGNNCC | 1 cut(s) | 86 |
| PspPI | GGNCC | 1 cut(s) | 483 |
| PstNI | CAGNNNCTG | 1 cut(s) | 300 |
| PsuI | RGATCY | 6 cut(s) | 84, 96, 116, 122, 218, 262 |
| PvuII | CAGCTG | 1 cut(s) | 212 |
| RsaI | GTAC | 1 cut(s) | 400 |
| RsaNI | GTAC | 1 cut(s) | 399 |
| SatI | GCNGC | 2 cut(s) | 210, 432 |
| Sau96I | GGNCC | 1 cut(s) | 483 |
| SfcI | CTRYAG | 1 cut(s) | 301 |
| SmlI | CTYRAG | 1 cut(s) | 76 |
| SmoI | CTYRAG | 1 cut(s) | 76 |
| SsiI | CCGC | 3 cut(s) | 144, 357, 422 |
| SspMI | CTAG | 1 cut(s) | 477 |
| TaaI | ACNGT | 4 cut(s) | 73, 302, 320, 398 |
| TaiI | ACGT | 4 cut(s) | 200, 404, 446, 528 |
| TaqI | TCGA | 2 cut(s) | 15, 155 |
| TfiI | GAWTC | 1 cut(s) | 20 |
| TseFI | GTSAC | 3 cut(s) | 34, 190, 203 |
| TseI | GCWGC | 2 cut(s) | 209, 431 |
| Tsp45I | GTSAC | 3 cut(s) | 34, 190, 203 |
| TspDTI | ATGAA | 1 cut(s) | 363 |
| TspGWI | ACGGA | 2 cut(s) | 178, 191 |
| XmnI | GAANNNNTTC | 1 cut(s) | 495 |
| XspI | CTAG | 1 cut(s) | 477 |
| ZraI | GACGTC | 1 cut(s) | 444 |