Rorug02G0058300

Brefeldin A-inhibited guanine nucleotide-exchange protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0007281
Physical Location & Seq
Reverse (-)
4495053 .. 4500413
5361 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0058300.1

Sequence Viewer

Length: 3114 bp
ATGACGCCTGTAGTTCCATATTCTATAAGCAATGTCTCAGTATTTCCTGGAACTGCCTTTACCTCAAGAAAGACCAATTCTTTAACCAAATTCAATTTTTCTAGGAAATCCGCTAGACATACTCTATCCCCCCACAGTTTTCTTTTACCTTTTTCGACCTCTATTAGATTGTTTCCATTATACAACAACAAATGCCCTGTACATCATAGATCTAGAACCTATGTAGTATCTGCCACAGGGACTGACGTAGCAGTGGAGCAACCAGACTCACCCGTTGCAGAAGCTTCAACTGAAGCTTTGGATAAATCCTCCGATGCAGCTGAAACTAGTGAAAAATCCTCCAACTCTGACGCAAGTTCCAGTCCATCTCAGGCAAGGCGTGCAAGAACTAGTAGGCAAAGTGAGATGTCACCTGTTAAGAATGAGGAGCTGGTTCCTGGCGCAACTTTTACAGGGAAAGTGAGATCAATCCAGCCATTTGGTGCTTTCATTGATTTTGGAGCTTTCACAGATGGCCTGGTACATGTTTCACAGCTGAGTGATACTTATGTAAAAGATGTAGGAAGTGTTGTTTCTGTTGGGCAAGAGGTGAAGGTGACATTAGTTGAAGCCAATATGGAGACTAAGCGGATATCTCTCACTATGCGTGAAGGCAAAGATGCTTCCAGTAGTGATAGGGGTGGATCTGATAGGAGAGGTGGTCCAAAGAAAGGAGAGAGGAAAAACGAGGGGAGAAAAAGTTCAAAGTTTGCTAAGGGGCAGGACTTAGTGGGCACGGTGAAGAATTTGGTGAGGGCTGGTGCTTTTATATCTCTTCCTGAGGGGGAAGAAGGTTTCTTGCCTCAGTCTGAGGAAGCTGATGAAGGATTTGCAAGCATTATGGGGGAGACCTCTATGGAGGTTGGCCAGGAAGTTAATGTCCGTGTGTTGCGTATTAGTAGAGGACAAGTAACCTTGACAATGAAGAAAGAAGAAGATATTCAGAAGTCAGAGTCCCAGATCACTCAAGGAGTCATCCACACAGCAACAAACCCATTTCTCCTGGCTTTTCGCCAAAACAAGGATATTGCTGCATTTTTGGACGAAAGAGAGAAAGTAGAGAAAGCAACTAAAGAAACTGTAAATCCAAAGAGTACAGAAGAATCAACACAGAAGGTTAATGAAACTGAGAATGAGTCCAATATTCATGAAGTGCTGGACAAACAAGTAAGTAGTGATGAGCAAAGTCTTGGTGTCTCTTCTGCCGTGGACGAAAGTTTTGAAAATGATGGTGCTCCTTTAGAGGTGGTTGATGTGGGAGCCAGTGGAATAGATGATACGTCAAGCAAAGAAGACCAGGAAACCATCGTTTCTAGTTCAACAGAAATTCTAGAAACTATAGATGGTGCAGTCCAAGCCATACAAAAAGAAGAGATGAGTTCCGAAATCTTGGTTCCTGAAGAAAGTATATCTACCACAGATTCTACAATTCAGGAGTCTCCGTCAACTGATGGTGTGGAAAATGATTCAAATCCAGATTCGTCTAGTGAAATAGCTAATCAAGCATTGCCATCAGATATTACAGCAACTGAAGAGGTTATAGAGAGTAAAGTAGACGACACAGTAGCAAAAGATCCACCTCAAATAGAACCACCTACTTCAGAGAGTGAAAGTCCTTCAGCTCCACTAACTGAAGATGAGGAAGTGCAACCAGCTCCTAATACAAGTGGGAGTCTCACCAGCTCAGATGTACAACCAGATCTTGCTTCTCCTCAAGAGACAAAAGCAACTATATCACCAGCTCTTGTAAAACAGCTCCGTGAAGAGTCAGGAGCTGGAATGATGGACTGCAAAAAGGCTTTGTTAGAGTCTGGAGGAGACATTGTCAAAGCCCAGGAGTTCCTTAGAAAGAAAGGCTTAGCAAGTGCAGACAAGAAAGCCAGCAGAGCCACTGCTGAAGGGAGAATAGGTTCATACATTCACGATAGCAGGATTGGTATCTTGCTGGAGGTAAACTGTGAGACAGATTTTGTTTCCCGGGGTGACATTTTCAAGGAGCTGGTTGATGATCTGGCTATGCAAGCAGCTGCATGCCCTCAAGTACAGTATGTTACTACAGAAGACGTTCCTGAAGAGTTTATAAACAAGGAAAGAGAGATTGAGATGCAGAAAGAAGATCTTTTGTCAAAGCCAGAGCAGATTAGATCAAAGATTGTTGACGGGAGGATCAGGAAGAGGCTCGAGGAGCTGGCATTGCTTGAGCAGCCCTACATCAAGAATGATAAGGTGGTGGTGAAGGACTGGGTGAAGCAAACCATTGCAACCATTGGGGAAAACATAAAAGTCAAGAGGTTTGTGCGTTTCAATCTGGGAGAAGGCTTGGAAAAACGGAGTCAGGATTTTGCAGCTGAAGTGGCTGCTCAAACTGCAGCAAAAAAGGTGCCCATAGCAGGGAAAGAACAGCCTGCTGCAGTTGAAGCAAAGGAAACAGTTCAGAAGGCACCAACTGTAGCTATCTCAGCTGCTTTGGTTAAACAACTAAGGGAAGAAACTGGAGCGGGAATGATGGACTGCAAGAAAGCTCTCTCAGAAACTGGAGGGGATATAGAGAAGGCACAAGAGTACCTCAGAAAGAAAGGTCTTTCTTCTGCTGAAAAGAAATCCAGCCGGCTTGCTGCTGAAGGCAGGATAGGATCTTATATTCATGACGCTCGCATTGGAGTTCTGATTGAAGTAAACTCCGAGACTGATTTTGTTGGTAGAAGTGAAAAATTCAAGGAGTTGGTTGATGACCTGGCGATGCAAGTTGCGGCCTGCCCACAGGTGCAATTTGTATCCGTCGAAGATATTCCAGAGAGTACTGTAAAGAAGGAAAAAGAGCTTGAGATGCAGAGGGAGGACCTTCTGTCAAAACCTGAAAACATCAGGGAGAGAATCGTGGAGGGAAGGATCTCAAAGAGGCTTGGGGAGCTTGCTTTGTTGGAGCAACCTTTTATCAAAGATGATAGTATATTGGTGAAGGATCTGGTGAAGCAGACGATTGCTGCTCTTGGGGAAAACATAAAAGTTAGAAGGTTTGTTCGGTTCACTCTTGGGGAGACAGTTGAGGGTGCGAAATCAGAAGTTGAAGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000139 GO:0002376 GO:0003674 GO:0005085 GO:0005086 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005802 GO:0005829 GO:0006810 GO:0006887 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0007030 GO:0008064 GO:0008092 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010256 GO:0010556 GO:0010557 GO:0010559 GO:0010560 GO:0010604 GO:0010639 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0016363 GO:0017022 GO:0019222 GO:0019899 GO:0030532 GO:0030832 GO:0030833 GO:0030837 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031333 GO:0031399 GO:0031401 GO:0031410 GO:0031974 GO:0031981 GO:0031982 GO:0031984 GO:0032268 GO:0032270 GO:0032271 GO:0032272 GO:0032535 GO:0032878 GO:0032940 GO:0032956 GO:0032970 GO:0032991 GO:0033043 GO:0034237 GO:0034260 GO:0034399 GO:0040007 GO:0042742 GO:0043086 GO:0043087 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043254 GO:0044087 GO:0044092 GO:0044422 GO:0044424 GO:0044428 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046903 GO:0048471 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051018 GO:0051020 GO:0051128 GO:0051129 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051336 GO:0051346 GO:0051493 GO:0051494 GO:0051704 GO:0051707 GO:0060049 GO:0060050 GO:0060255 GO:0061041 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0071840 GO:0080090 GO:0080134 GO:0090066 GO:0090283 GO:0090284 GO:0090303 GO:0097708 GO:0098542 GO:0098588 GO:0098772 GO:0098791 GO:0110053 GO:0120114 GO:1902903 GO:1902904 GO:1903018 GO:1903020 GO:1903034 GO:1903036 GO:1990904 GO:2000112 GO:2000114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DCB DUF1981 Mon2_C Sec7 Sec7_N

Protein Analysis

1037

Amino Acids

113.01

Weight (kDa)

4.92

Isoelectric Point (pI)

51.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S1_RRP5 PF23459 145 - 210 3.3e-06 RRP5 S1 domain
S1 PF00575 146 - 216 1.8e-15 S1 RNA binding domain
S1 PF00575 249 - 314 6.1e-07 S1 RNA binding domain
EF_TS PF00889 643 - 785 1.2e-28 Elongation factor TS
EF_TS PF00889 882 - 1026 3.4e-29 Elongation factor TS
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2120
AccB1I GGYRCC 2 cut(s) 2419, 2479
AccBSI CCGCTC 1 cut(s) 2537
AccI GTMKAC 1 cut(s) 1593
AciI CCGC 4 cut(s) 111, 628, 2537, 2789
AclWI GGATC 6 cut(s) 691, 1607, 2213, 2680, 2936, 3009
AcoI YGGCCR 1 cut(s) 904
AcsI RAATTY 4 cut(s) 89, 784, 1365, 2750
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 7 cut(s) 201, 522, 1135, 1731, 2082, 2603, 2839
AfiI CCNNNNNNNGG 4 cut(s) 710, 1060, 2429, 2430
AflIII ACRYGT 1 cut(s) 523
AhdI GACNNNNNGTC 1 cut(s) 2884
AhlI ACTAGT 2 cut(s) 326, 389
AjnI CCWGG 8 cut(s) 46, 436, 516, 906, 1041, 1335, 1872, 2772
AloI GAACNNNNNNTCC 4 cut(s) 724, 756, 1933, 1965
Alw21I GWGCWC 1 cut(s) 1276
AlwI GGATC 6 cut(s) 691, 1607, 2213, 2680, 2936, 3009
AlwNI CAGNNNCTG 4 cut(s) 242, 1568, 1814, 2573
Ama87I CYCGRG 2 cut(s) 2016, 2219
AoxI GGCC 3 cut(s) 514, 904, 2790
ApoI RAATTY 4 cut(s) 89, 784, 1365, 2750
ArsI GACNNNNNNTTYG 2 cut(s) 1241, 1273
Asp700I GAANNNNTTC 6 cut(s) 739, 978, 1948, 2103, 2469, 2826
AspLEI GCGC 1 cut(s) 443
AspS9I GGNCC 2 cut(s) 701, 2878
AsuC2I CCSGG 2 cut(s) 2017, 2018
AvaI CYCGRG 2 cut(s) 2016, 2219
AvaII GGWCC 2 cut(s) 701, 2878
AxyI CCTNAGG 1 cut(s) 819
BaeGI GKGCMC 2 cut(s) 776, 2424
BaeI ACNNNNGTAYC 4 cut(s) 534, 567, 2585, 2618
BalI TGGCCA 1 cut(s) 906
BanI GGYRCC 2 cut(s) 2419, 2479
BbsI GAAGAC 2 cut(s) 1338, 2106
Bbv12I GWGCWC 1 cut(s) 1276
BccI CCATC 9 cut(s) 373, 506, 1262, 1352, 1376, 1484, 1558, 1816, 2539
BceAI ACGGC 1 cut(s) 1229
BciT130I CCWGG 8 cut(s) 48, 438, 518, 908, 1043, 1337, 1874, 2774
BciVI GTATCC 1 cut(s) 2824
BcnI CCSGG 2 cut(s) 2017, 2018
BcuI ACTAGT 2 cut(s) 326, 389
BfaI CTAG 8 cut(s) 102, 114, 213, 327, 390, 1353, 1370, 1524
BfmI CTRYAG 6 cut(s) 9, 1377, 2094, 2406, 2448, 2487
BfuI GTATCC 1 cut(s) 2824
BglII AGATCT 3 cut(s) 209, 1738, 2155
BlpI GCTNAGC 1 cut(s) 1897
BmcAI AGTACT 1 cut(s) 2839
Bme18I GGWCC 2 cut(s) 701, 2878
BmeRI GACNNNNNGTC 1 cut(s) 2884
BmeT110I CYCGRG 2 cut(s) 2016, 2219
BmgT120I GGNCC 2 cut(s) 701, 2878
BmiI GGNNCC 5 cut(s) 435, 1300, 1434, 2421, 2481
BmrI ACTGGG 1 cut(s) 2290
BmsI GCATC 5 cut(s) 304, 649, 2133, 2769, 2856
BmuI ACTGGG 1 cut(s) 2290
BpiI GAAGAC 2 cut(s) 1338, 2106
BpmI CTGGAG 4 cut(s) 1872, 2006, 2553, 2595
Bpu10I CCTNAGC 1 cut(s) 753
Bpu1102I GCTNAGC 1 cut(s) 1897
BpuEI CTTGAG 6 cut(s) 49, 990, 1737, 2061, 2258, 2882
BpuMI CCSGG 2 cut(s) 2017, 2018
BsaBI GATNNNNATC 2 cut(s) 1509, 1976
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 881
BsaJI CCNNGG 4 cut(s) 1245, 1872, 2016, 2017
Bsc4I CCNNNNNNNGG 4 cut(s) 710, 1060, 2429, 2430
Bse118I RCCGGY 1 cut(s) 2646
Bse1I ACTGG 6 cut(s) 360, 666, 1302, 2285, 2536, 2578
Bse21I CCTNAGG 1 cut(s) 819
Bse3DI GCAATG 4 cut(s) 37, 1544, 2231, 2295
Bse8I GATNNNNATC 2 cut(s) 1509, 1976
BseBI CCWGG 8 cut(s) 48, 438, 518, 908, 1043, 1337, 1874, 2774
BseDI CCNNGG 4 cut(s) 1245, 1872, 2016, 2017
BseGI GGATG 1 cut(s) 1014
BseJI GATNNNNATC 2 cut(s) 1509, 1976
BseLI CCNNNNNNNGG 4 cut(s) 710, 1060, 2429, 2430
BseMI GCAATG 4 cut(s) 37, 1544, 2231, 2295
BseNI ACTGG 6 cut(s) 360, 666, 1302, 2285, 2536, 2578
BseRI GAGGAG 4 cut(s) 440, 1740, 1869, 2237
BseSI GKGCMC 2 cut(s) 776, 2424
BsgI GTGCAG 2 cut(s) 1407, 1926
BshFI GGCC 3 cut(s) 516, 906, 2792
BshNI GGYRCC 2 cut(s) 2419, 2479
BsiHKAI GWGCWC 1 cut(s) 1276
BsiHKCI CYCGRG 2 cut(s) 2016, 2219
BsiSI CCGG 2 cut(s) 2017, 2647
BslFI GGGAC 2 cut(s) 253, 979
BslI CCNNNNNNNGG 4 cut(s) 710, 1060, 2429, 2430
BsmFI GGGAC 2 cut(s) 253, 979
BsnI GGCC 3 cut(s) 516, 906, 2792
Bso31I GGTCTC 1 cut(s) 881
BsoBI CYCGRG 2 cut(s) 2016, 2219
Bsp1286I GDGCHC 3 cut(s) 776, 1276, 2424
Bsp1407I TGTACA 2 cut(s) 199, 1729
Bsp1720I GCTNAGC 1 cut(s) 1897
BspACI CCGC 4 cut(s) 111, 628, 2537, 2789
BspANI GGCC 3 cut(s) 516, 906, 2792
BspHI TCATGA 2 cut(s) 1186, 2683
BspLI GGNNCC 5 cut(s) 435, 1300, 1434, 2421, 2481
BspMAI CTGCAG 2 cut(s) 2410, 2452
BspPI GGATC 6 cut(s) 691, 1607, 2213, 2680, 2936, 3009
BspT107I GGYRCC 2 cut(s) 2419, 2479
BspTNI GGTCTC 1 cut(s) 881
BsrBI CCGCTC 1 cut(s) 2537
BsrDI GCAATG 4 cut(s) 37, 1544, 2231, 2295
BsrFI RCCGGY 1 cut(s) 2646
BsrGI TGTACA 2 cut(s) 199, 1729
BsrI ACTGG 6 cut(s) 360, 666, 1302, 2285, 2536, 2578
BssAI RCCGGY 1 cut(s) 2646
BssECI CCNNGG 4 cut(s) 1245, 1872, 2016, 2017
BssNI GRCGYC 1 cut(s) 5
Bst2UI CCWGG 8 cut(s) 48, 438, 518, 908, 1043, 1337, 1874, 2774
Bst6I CTCTTC 7 cut(s) 819, 1243, 1404, 1566, 1797, 2106, 2207
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 1 cut(s) 380
BstAUI TGTACA 2 cut(s) 199, 1729
BstDSI CCRYGG 1 cut(s) 1245
BstF5I GGATG 1 cut(s) 1014
BstHHI GCGC 1 cut(s) 443
BstNI CCWGG 8 cut(s) 48, 438, 518, 908, 1043, 1337, 1874, 2774
BstNSI RCATGY 2 cut(s) 527, 2073
BstSFI CTRYAG 6 cut(s) 9, 1377, 2094, 2406, 2448, 2487
BstSLI GKGCMC 2 cut(s) 776, 2424
BstV2I GAAGAC 2 cut(s) 1338, 2106
BstX2I RGATCY 8 cut(s) 209, 683, 1612, 1738, 2155, 2672, 2928, 3001
BstXI CCANNNNNNTGG 1 cut(s) 479
BstYI RGATCY 8 cut(s) 209, 683, 1612, 1738, 2155, 2672, 2928, 3001
Bsu36I CCTNAGG 1 cut(s) 819
BsuI GTATCC 1 cut(s) 2824
BsuRI GGCC 3 cut(s) 516, 906, 2792
BtgI CCRYGG 1 cut(s) 1245
BtgZI GCGATG 1 cut(s) 2792
BtsCI GGATG 1 cut(s) 1014
BtsI GCAGTG 2 cut(s) 258, 1929
BtsIMutI CAGTG 3 cut(s) 258, 1309, 1929
CaiI CAGNNNCTG 4 cut(s) 242, 1568, 1814, 2573
CciI TCATGA 2 cut(s) 1186, 2683
CfoI GCGC 1 cut(s) 443
Cfr10I RCCGGY 1 cut(s) 2646
Cfr13I GGNCC 2 cut(s) 701, 2878
Cfr9I CCCGGG 1 cut(s) 2016
CseI GACGC 3 cut(s) 13, 359, 2696
Csp6I GTAC 7 cut(s) 200, 521, 1134, 1730, 2081, 2602, 2838
CviAII CATG 4 cut(s) 524, 1187, 2070, 2684
CviQI GTAC 7 cut(s) 200, 521, 1134, 1730, 2081, 2602, 2838
DriI GACNNNNNGTC 1 cut(s) 2884
EaeI YGGCCR 1 cut(s) 904
Eam1104I CTCTTC 7 cut(s) 819, 1243, 1404, 1566, 1797, 2106, 2207
Eam1105I GACNNNNNGTC 1 cut(s) 2884
EarI CTCTTC 7 cut(s) 819, 1243, 1404, 1566, 1797, 2106, 2207
Eco31I GGTCTC 1 cut(s) 881
Eco32I GATATC 1 cut(s) 633
Eco47I GGWCC 2 cut(s) 701, 2878
Eco81I CCTNAGG 1 cut(s) 819
Eco88I CYCGRG 2 cut(s) 2016, 2219
EcoO109I RGGNCCY 1 cut(s) 2878
EcoRII CCWGG 8 cut(s) 46, 436, 516, 906, 1041, 1335, 1872, 2772
EcoRV GATATC 1 cut(s) 633
FaeI CATG 4 cut(s) 527, 1190, 2073, 2687
FalI AAGNNNNNCTT 4 cut(s) 1880, 1912, 2142, 2174
FaqI GGGAC 2 cut(s) 253, 979
FatI CATG 4 cut(s) 523, 1186, 2069, 2683
FauI CCCGC 1 cut(s) 2530
FblI GTMKAC 1 cut(s) 1593
FokI GGATG 1 cut(s) 1001
FspBI CTAG 8 cut(s) 102, 114, 213, 327, 390, 1353, 1370, 1524
GlaI GCGC 1 cut(s) 442
GsuI CTGGAG 4 cut(s) 1872, 2006, 2553, 2595
HaeIII GGCC 3 cut(s) 516, 906, 2792
HapII CCGG 2 cut(s) 2017, 2647
HgaI GACGC 3 cut(s) 13, 359, 2696
HhaI GCGC 1 cut(s) 443
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 4 cut(s) 527, 1190, 2073, 2687
Hin6I GCGC 1 cut(s) 441
HinP1I GCGC 1 cut(s) 441
HincII GTYRAC 2 cut(s) 1485, 2197
HindII GTYRAC 2 cut(s) 1485, 2197
HindIII AAGCTT 2 cut(s) 282, 294
HpaII CCGG 2 cut(s) 2017, 2647
Hpy166II GTNNAC 7 cut(s) 1249, 1485, 1594, 1993, 2197, 2716, 3066
Hpy8I GTNNAC 7 cut(s) 1249, 1485, 1594, 1993, 2197, 2716, 3066
Hpy99I CGWCG 1 cut(s) 2822
HpyCH4IV ACGT 3 cut(s) 246, 1319, 2103
HpySE526I ACGT 3 cut(s) 246, 1319, 2103
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 4 cut(s) 527, 1190, 2073, 2687
HspAI GCGC 1 cut(s) 441
KroI GCCGGC 1 cut(s) 2646
KroNI GCCGGC 1 cut(s) 2648
LweI GCATC 5 cut(s) 304, 649, 2133, 2769, 2856
MaeI CTAG 8 cut(s) 102, 114, 213, 327, 390, 1353, 1370, 1524
MaeII ACGT 3 cut(s) 246, 1319, 2103
MaeIII GTNAC 5 cut(s) 408, 595, 949, 2021, 2089
MbiI CCGCTC 1 cut(s) 2537
MflI RGATCY 8 cut(s) 209, 683, 1612, 1738, 2155, 2672, 2928, 3001
MhlI GDGCHC 3 cut(s) 776, 1276, 2424
MlsI TGGCCA 1 cut(s) 906
MluCI AATT 8 cut(s) 76, 89, 94, 784, 1365, 1467, 2750, 2807
MluNI TGGCCA 1 cut(s) 906
MlyI GAGTC 9 cut(s) 260, 1001, 1020, 1184, 1484, 1720, 1814, 1856, 2380
MmeI TCCRAC 2 cut(s) 366, 2940
Mox20I TGGCCA 1 cut(s) 906
MroNI GCCGGC 1 cut(s) 2646
MroXI GAANNNNTTC 6 cut(s) 739, 978, 1948, 2103, 2469, 2826
MscI TGGCCA 1 cut(s) 906
MseI TTAA 5 cut(s) 83, 417, 915, 1158, 2511
Msp20I TGGCCA 1 cut(s) 906
MspA1I CMGCKG 5 cut(s) 320, 535, 2066, 2387, 2501
MspI CCGG 2 cut(s) 2017, 2647
MvaI CCWGG 8 cut(s) 48, 438, 518, 908, 1043, 1337, 1874, 2774
NaeI GCCGGC 1 cut(s) 2648
NciI CCSGG 2 cut(s) 2017, 2018
NgoMIV GCCGGC 1 cut(s) 2646
NlaIII CATG 4 cut(s) 527, 1190, 2073, 2687
NlaIV GGNNCC 5 cut(s) 435, 1300, 1434, 2421, 2481
NmuCI GTSAC 3 cut(s) 408, 595, 2021
NspI RCATGY 2 cut(s) 527, 2073
PaeI GCATGC 1 cut(s) 2073
PaeR7I CTCGAG 1 cut(s) 2219
PagI TCATGA 2 cut(s) 1186, 2683
PciI ACATGT 1 cut(s) 523
PdiI GCCGGC 1 cut(s) 2648
PdmI GAANNNNTTC 6 cut(s) 739, 978, 1948, 2103, 2469, 2826
PfeI GAWTC 5 cut(s) 1142, 1460, 1505, 1517, 2913
PflFI GACNNNGTC 1 cut(s) 1862
PfoI TCCNGGA 1 cut(s) 46
PleI GAGTC 9 cut(s) 260, 1000, 1019, 1183, 1483, 1719, 1813, 1855, 2379
PpsI GAGTC 9 cut(s) 260, 1000, 1019, 1183, 1483, 1719, 1813, 1855, 2379
PpuMI RGGWCCY 1 cut(s) 2878
PscI ACATGT 1 cut(s) 523
PsiI TTATAA 1 cut(s) 2120
Psp5II RGGWCCY 1 cut(s) 2878
Psp6I CCWGG 8 cut(s) 46, 436, 516, 906, 1041, 1335, 1872, 2772
PspGI CCWGG 8 cut(s) 46, 436, 516, 906, 1041, 1335, 1872, 2772
PspN4I GGNNCC 5 cut(s) 435, 1300, 1434, 2421, 2481
PspPI GGNCC 2 cut(s) 701, 2878
PspPPI RGGWCCY 1 cut(s) 2878
PspXI VCTCGAGB 1 cut(s) 2219
PsrI GAACNNNNNNTAC 2 cut(s) 43, 75
PstI CTGCAG 2 cut(s) 2410, 2452
PstNI CAGNNNCTG 4 cut(s) 242, 1568, 1814, 2573
PsuI RGATCY 8 cut(s) 209, 683, 1612, 1738, 2155, 2672, 2928, 3001
PsyI GACNNNGTC 1 cut(s) 1862
PvuII CAGCTG 5 cut(s) 320, 535, 2066, 2387, 2501
RsaI GTAC 7 cut(s) 201, 522, 1135, 1731, 2082, 2603, 2839
RsaNI GTAC 7 cut(s) 200, 521, 1134, 1730, 2081, 2602, 2838
SaqAI TTAA 5 cut(s) 83, 417, 915, 1158, 2511
Sau96I GGNCC 2 cut(s) 701, 2878
ScaI AGTACT 1 cut(s) 2839
SchI GAGTC 9 cut(s) 260, 1001, 1020, 1184, 1484, 1720, 1814, 1856, 2380
SduI GDGCHC 3 cut(s) 776, 1276, 2424
SfaNI GCATC 5 cut(s) 304, 649, 2133, 2769, 2856
SfcI CTRYAG 6 cut(s) 9, 1377, 2094, 2406, 2448, 2487
Sfr274I CTCGAG 1 cut(s) 2219
SinI GGWCC 2 cut(s) 701, 2878
SlaI CTCGAG 1 cut(s) 2219
SmaI CCCGGG 1 cut(s) 2018
SmlI CTYRAG 7 cut(s) 64, 1005, 1752, 2076, 2219, 2237, 2861
SmoI CTYRAG 7 cut(s) 64, 1005, 1752, 2076, 2219, 2237, 2861
SpeI ACTAGT 2 cut(s) 326, 389
SphI GCATGC 1 cut(s) 2073
Sse9I AATT 8 cut(s) 76, 89, 94, 784, 1365, 1467, 2750, 2807
SsiI CCGC 4 cut(s) 111, 628, 2537, 2789
SspI AATATT 1 cut(s) 1183
SspMI CTAG 8 cut(s) 102, 114, 213, 327, 390, 1353, 1370, 1524
TaiI ACGT 3 cut(s) 249, 1322, 2106
TaqI TCGA 3 cut(s) 155, 2220, 2820
TasI AATT 8 cut(s) 76, 89, 94, 784, 1365, 1467, 2750, 2807
TatI WGTACW 5 cut(s) 199, 1133, 1729, 2080, 2837
TauI GCSGC 1 cut(s) 2792
TfiI GAWTC 5 cut(s) 1142, 1460, 1505, 1517, 2913
Tru1I TTAA 5 cut(s) 83, 417, 915, 1158, 2511
Tru9I TTAA 5 cut(s) 83, 417, 915, 1158, 2511
TscAI CASTG 3 cut(s) 258, 1309, 1936
TseFI GTSAC 3 cut(s) 408, 595, 2021
Tsp45I GTSAC 3 cut(s) 408, 595, 2021
TspDTI ATGAA 8 cut(s) 478, 876, 977, 1175, 1176, 1203, 1941, 2672
TspGWI ACGGA 5 cut(s) 911, 1470, 1787, 2383, 2806
TspMI CCCGGG 1 cut(s) 2016
TspRI CASTG 3 cut(s) 258, 1309, 1936
Tth111I GACNNNGTC 1 cut(s) 1862
VpaK11BI GGWCC 2 cut(s) 701, 2878
XapI RAATTY 4 cut(s) 89, 784, 1365, 2750
XbaI TCTAGA 2 cut(s) 212, 1369
XceI RCATGY 2 cut(s) 527, 2073
XhoI CTCGAG 1 cut(s) 2219
XmaI CCCGGG 1 cut(s) 2016
XmiI GTMKAC 1 cut(s) 1593
XmnI GAANNNNTTC 6 cut(s) 739, 978, 1948, 2103, 2469, 2826
XspI CTAG 8 cut(s) 102, 114, 213, 327, 390, 1353, 1370, 1524
ZrmI AGTACT 1 cut(s) 2839
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.