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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G25070 |
| fragaria_vesca | FvH4_5g26850 FvH4_5g26850 |
| malus_domestica | MD04G1004600.v1.1 |
| prunus_persica | Prupe.1G004400_v2.0.a1 |
| pyrus_communis | pycom04g00470 |
| rosa_chinensis | RchiOBHm_Chr7g0217751 |
| rosa_laevigata | RLG00000002441 |
| rosa_multiflora | Rmu_sc0000202.1_g000023 Rmu_sc0006958.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00241710 |
| rosa_rugosa | Rorug07G0171000 |
| rosa_samantha | Rh7AG311700 Rh7BG303600 Rh7CG330500 Rh7DG311400 |
| rosa_wichuraiana | Rw7G026450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 328 |
| AccBSI | CCGCTC | 1 cut(s) | 353 |
| AccII | CGCG | 1 cut(s) | 488 |
| AclI | AACGTT | 1 cut(s) | 1077 |
| AclWI | GGATC | 2 cut(s) | 964, 1117 |
| AcsI | RAATTY | 2 cut(s) | 1747, 1792 |
| AcuI | CTGAAG | 4 cut(s) | 126, 918, 1041, 1380 |
| AcyI | GRCGYC | 2 cut(s) | 59, 325 |
| AfaI | GTAC | 2 cut(s) | 1578, 1606 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1881 |
| AflII | CTTAAG | 1 cut(s) | 1619 |
| AgsI | TTSAA | 7 cut(s) | 260, 1093, 1118, 1285, 1715, 1868, 2015 |
| AjiI | CACGTC | 1 cut(s) | 1387 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1148, 1180 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 14, 46 |
| Alw21I | GWGCWC | 2 cut(s) | 714, 1845 |
| Alw26I | GTCTC | 5 cut(s) | 66, 734, 1340, 2093, 2146 |
| AlwI | GGATC | 2 cut(s) | 964, 1117 |
| Ama87I | CYCGRG | 2 cut(s) | 713, 1608 |
| ApeKI | GCWGC | 8 cut(s) | 620, 721, 785, 893, 1186, 1733, 1772, 1991 |
| ApoI | RAATTY | 2 cut(s) | 1747, 1792 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 873, 2199 |
| AspLEI | GCGC | 2 cut(s) | 490, 2044 |
| AsuHPI | GGTGA | 4 cut(s) | 84, 86, 1210, 1285 |
| AsuII | TTCGAA | 1 cut(s) | 33 |
| AsuNHI | GCTAGC | 1 cut(s) | 805 |
| AvaI | CYCGRG | 2 cut(s) | 713, 1608 |
| BanII | GRGCYC | 2 cut(s) | 714, 1845 |
| BauI | CACGAG | 1 cut(s) | 609 |
| BbsI | GAAGAC | 1 cut(s) | 411 |
| Bbv12I | GWGCWC | 2 cut(s) | 714, 1845 |
| BbvI | GCAGC | 8 cut(s) | 607, 733, 772, 905, 1173, 1720, 1759, 1978 |
| BccI | CCATC | 5 cut(s) | 34, 271, 1810, 1883, 2140 |
| BceAI | ACGGC | 3 cut(s) | 156, 198, 404 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 398, 432 |
| BciVI | GTATCC | 1 cut(s) | 365 |
| BclI | TGATCA | 2 cut(s) | 135, 177 |
| BcoDI | GTCTC | 5 cut(s) | 66, 734, 1340, 2093, 2146 |
| BfaI | CTAG | 2 cut(s) | 806, 1524 |
| BfmI | CTRYAG | 2 cut(s) | 1145, 1773 |
| BfrI | CTTAAG | 1 cut(s) | 1619 |
| BfuI | GTATCC | 1 cut(s) | 365 |
| BlpI | GCTNAGC | 2 cut(s) | 1539, 1839 |
| BmeT110I | CYCGRG | 2 cut(s) | 713, 1608 |
| BmgBI | CACGTC | 1 cut(s) | 1387 |
| BmiI | GGNNCC | 2 cut(s) | 144, 1423 |
| BmsI | GCATC | 8 cut(s) | 406, 680, 745, 838, 928, 940, 1692, 1745 |
| BmtI | GCTAGC | 1 cut(s) | 809 |
| BpiI | GAAGAC | 1 cut(s) | 411 |
| BpmI | CTGGAG | 1 cut(s) | 986 |
| Bpu10I | CCTNAGC | 2 cut(s) | 270, 789 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1539, 1839 |
| Bpu14I | TTCGAA | 1 cut(s) | 33 |
| BpuEI | CTTGAG | 5 cut(s) | 544, 746, 1124, 1199, 2054 |
| Bsa29I | ATCGAT | 1 cut(s) | 959 |
| BsaHI | GRCGYC | 2 cut(s) | 59, 325 |
| BsaI | GGTCTC | 2 cut(s) | 1340, 2093 |
| BsaJI | CCNNGG | 2 cut(s) | 114, 2058 |
| BsaWI | WCCGGW | 3 cut(s) | 71, 253, 503 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1881 |
| Bse118I | RCCGGY | 1 cut(s) | 55 |
| Bse1I | ACTGG | 3 cut(s) | 1282, 1602, 2193 |
| Bse3DI | GCAATG | 1 cut(s) | 818 |
| BseCI | ATCGAT | 1 cut(s) | 959 |
| BseDI | CCNNGG | 2 cut(s) | 114, 2058 |
| BseGI | GGATG | 6 cut(s) | 10, 45, 943, 1462, 1647, 1707 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1881 |
| BseMI | GCAATG | 1 cut(s) | 818 |
| BseNI | ACTGG | 3 cut(s) | 1282, 1602, 2193 |
| BseRI | GAGGAG | 3 cut(s) | 1196, 1434, 1607 |
| BseXI | GCAGC | 8 cut(s) | 607, 733, 772, 905, 1173, 1720, 1759, 1978 |
| Bsh1236I | CGCG | 1 cut(s) | 488 |
| Bsh1285I | CGRYCG | 1 cut(s) | 738 |
| BshVI | ATCGAT | 1 cut(s) | 959 |
| BsiEI | CGRYCG | 1 cut(s) | 738 |
| BsiHKAI | GWGCWC | 2 cut(s) | 714, 1845 |
| BsiHKCI | CYCGRG | 2 cut(s) | 713, 1608 |
| BsiSI | CCGG | 6 cut(s) | 56, 72, 254, 308, 504, 1706 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1881 |
| BsmAI | GTCTC | 5 cut(s) | 66, 734, 1340, 2093, 2146 |
| BsmBI | CGTCTC | 1 cut(s) | 66 |
| BsmI | GAATGC | 2 cut(s) | 652, 1009 |
| Bso31I | GGTCTC | 2 cut(s) | 1340, 2093 |
| BsoBI | CYCGRG | 2 cut(s) | 713, 1608 |
| Bsp119I | TTCGAA | 1 cut(s) | 33 |
| Bsp1286I | GDGCHC | 2 cut(s) | 714, 1845 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1539, 1839 |
| BspDI | ATCGAT | 1 cut(s) | 959 |
| BspFNI | CGCG | 1 cut(s) | 488 |
| BspHI | TCATGA | 1 cut(s) | 1398 |
| BspLI | GGNNCC | 2 cut(s) | 144, 1423 |
| BspMAI | CTGCAG | 2 cut(s) | 1149, 1777 |
| BspOI | GCTAGC | 1 cut(s) | 809 |
| BspPI | GGATC | 2 cut(s) | 964, 1117 |
| BspQI | GCTCTTC | 1 cut(s) | 702 |
| BspT104I | TTCGAA | 1 cut(s) | 33 |
| BspTI | CTTAAG | 1 cut(s) | 1619 |
| BspTNI | GGTCTC | 2 cut(s) | 1340, 2093 |
| BsrBI | CCGCTC | 1 cut(s) | 353 |
| BsrDI | GCAATG | 1 cut(s) | 818 |
| BsrFI | RCCGGY | 1 cut(s) | 55 |
| BsrI | ACTGG | 3 cut(s) | 1282, 1602, 2193 |
| BssAI | RCCGGY | 1 cut(s) | 55 |
| BssECI | CCNNGG | 2 cut(s) | 114, 2058 |
| BssNI | GRCGYC | 2 cut(s) | 59, 325 |
| BssSI | CACGAG | 1 cut(s) | 609 |
| BssT1I | CCWWGG | 1 cut(s) | 114 |
| Bst2BI | CACGAG | 1 cut(s) | 609 |
| Bst4CI | ACNGT | 4 cut(s) | 377, 538, 1964, 2164 |
| Bst6I | CTCTTC | 8 cut(s) | 341, 702, 864, 1524, 1551, 2091, 2097, 2106 |
| BstACI | GRCGYC | 2 cut(s) | 59, 325 |
| BstAFI | CTTAAG | 1 cut(s) | 1619 |
| BstBI | TTCGAA | 1 cut(s) | 33 |
| BstC8I | GCNNGC | 4 cut(s) | 669, 807, 1191, 1329 |
| BstF5I | GGATG | 6 cut(s) | 10, 45, 943, 1462, 1647, 1707 |
| BstFNI | CGCG | 1 cut(s) | 488 |
| BstHHI | GCGC | 2 cut(s) | 490, 2044 |
| BstMAI | GTCTC | 5 cut(s) | 66, 734, 1340, 2093, 2146 |
| BstMCI | CGRYCG | 1 cut(s) | 738 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 87, 125, 709, 718, 815, 1460, 1778, 2048 |
| BstSFI | CTRYAG | 2 cut(s) | 1145, 1773 |
| BstUI | CGCG | 1 cut(s) | 488 |
| BstV1I | GCAGC | 8 cut(s) | 607, 733, 772, 905, 1173, 1720, 1759, 1978 |
| BstV2I | GAAGAC | 1 cut(s) | 411 |
| BstX2I | RGATCY | 1 cut(s) | 1109 |
| BstYI | RGATCY | 1 cut(s) | 1109 |
| Bsu15I | ATCGAT | 1 cut(s) | 959 |
| BsuI | GTATCC | 1 cut(s) | 365 |
| BsuTUI | ATCGAT | 1 cut(s) | 959 |
| BtgZI | GCGATG | 1 cut(s) | 861 |
| BtrI | CACGTC | 1 cut(s) | 1387 |
| BtsCI | GGATG | 6 cut(s) | 10, 45, 943, 1462, 1647, 1707 |
| BtsIMutI | CAGTG | 4 cut(s) | 131, 173, 1338, 1969 |
| Cac8I | GCNNGC | 4 cut(s) | 669, 807, 1191, 1329 |
| CciI | TCATGA | 1 cut(s) | 1398 |
| CfoI | GCGC | 2 cut(s) | 490, 2044 |
| Cfr10I | RCCGGY | 1 cut(s) | 55 |
| ClaI | ATCGAT | 1 cut(s) | 959 |
| CseI | GACGC | 2 cut(s) | 48, 709 |
| Csp6I | GTAC | 2 cut(s) | 1577, 1605 |
| CviAII | CATG | 4 cut(s) | 1014, 1399, 1672, 1859 |
| CviQI | GTAC | 2 cut(s) | 1577, 1605 |
| DraI | TTTAAA | 2 cut(s) | 1753, 1791 |
| Eam1104I | CTCTTC | 8 cut(s) | 341, 702, 864, 1524, 1551, 2091, 2097, 2106 |
| EarI | CTCTTC | 8 cut(s) | 341, 702, 864, 1524, 1551, 2091, 2097, 2106 |
| EciI | GGCGGA | 1 cut(s) | 137 |
| Ecl136II | GAGCTC | 2 cut(s) | 712, 1843 |
| Eco130I | CCWWGG | 1 cut(s) | 114 |
| Eco24I | GRGCYC | 2 cut(s) | 714, 1845 |
| Eco31I | GGTCTC | 2 cut(s) | 1340, 2093 |
| Eco53kI | GAGCTC | 2 cut(s) | 712, 1843 |
| Eco57I | CTGAAG | 4 cut(s) | 126, 918, 1041, 1380 |
| Eco88I | CYCGRG | 2 cut(s) | 713, 1608 |
| EcoICRI | GAGCTC | 2 cut(s) | 712, 1843 |
| EcoT14I | CCWWGG | 1 cut(s) | 114 |
| EcoT38I | GRGCYC | 2 cut(s) | 714, 1845 |
| ErhI | CCWWGG | 1 cut(s) | 114 |
| Esp3I | CGTCTC | 1 cut(s) | 66 |
| FaeI | CATG | 4 cut(s) | 1017, 1402, 1675, 1862 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 861, 893, 1548, 1580, 2010, 2042 |
| FatI | CATG | 4 cut(s) | 1013, 1398, 1671, 1858 |
| FauNDI | CATATG | 1 cut(s) | 1510 |
| FbaI | TGATCA | 2 cut(s) | 135, 177 |
| FokI | GGATG | 6 cut(s) | 17, 52, 950, 1469, 1634, 1714 |
| FriOI | GRGCYC | 2 cut(s) | 714, 1845 |
| FspBI | CTAG | 2 cut(s) | 806, 1524 |
| GlaI | GCGC | 2 cut(s) | 489, 2043 |
| GsuI | CTGGAG | 1 cut(s) | 986 |
| HapII | CCGG | 6 cut(s) | 56, 72, 254, 308, 504, 1706 |
| HgaI | GACGC | 2 cut(s) | 48, 709 |
| HhaI | GCGC | 2 cut(s) | 490, 2044 |
| Hin1I | GRCGYC | 2 cut(s) | 59, 325 |
| Hin1II | CATG | 4 cut(s) | 1017, 1402, 1675, 1862 |
| Hin6I | GCGC | 2 cut(s) | 488, 2042 |
| HinP1I | GCGC | 2 cut(s) | 488, 2042 |
| HincII | GTYRAC | 2 cut(s) | 428, 1348 |
| HindII | GTYRAC | 2 cut(s) | 428, 1348 |
| HindIII | AAGCTT | 5 cut(s) | 978, 1461, 1541, 1562, 2069 |
| HpaII | CCGG | 6 cut(s) | 56, 72, 254, 308, 504, 1706 |
| HphI | GGTGA | 4 cut(s) | 84, 86, 1210, 1285 |
| Hpy166II | GTNNAC | 3 cut(s) | 428, 1348, 1390 |
| Hpy8I | GTNNAC | 3 cut(s) | 428, 1348, 1390 |
| Hpy99I | CGWCG | 4 cut(s) | 17, 404, 488, 703 |
| HpyAV | CCTTC | 6 cut(s) | 29, 156, 1129, 1195, 1207, 1405 |
| HpyCH4III | ACNGT | 4 cut(s) | 377, 538, 1964, 2164 |
| HpyCH4IV | ACGT | 3 cut(s) | 325, 1077, 1386 |
| HpyCH4V | TGCA | 7 cut(s) | 893, 1147, 1294, 1327, 1736, 1775, 1973 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 87, 125, 709, 718, 815, 1460, 1778, 2048 |
| HpySE526I | ACGT | 3 cut(s) | 325, 1077, 1386 |
| Hsp92I | GRCGYC | 2 cut(s) | 59, 325 |
| Hsp92II | CATG | 4 cut(s) | 1017, 1402, 1675, 1862 |
| HspAI | GCGC | 2 cut(s) | 488, 2042 |
| Ksp22I | TGATCA | 2 cut(s) | 135, 177 |
| LguI | GCTCTTC | 1 cut(s) | 702 |
| LmnI | GCTCC | 6 cut(s) | 43, 148, 1183, 1421, 1624, 1708 |
| Lsp1109I | GCAGC | 8 cut(s) | 607, 733, 772, 905, 1173, 1720, 1759, 1978 |
| LweI | GCATC | 8 cut(s) | 406, 680, 745, 838, 928, 940, 1692, 1745 |
| MaeI | CTAG | 2 cut(s) | 806, 1524 |
| MaeII | ACGT | 3 cut(s) | 325, 1077, 1386 |
| MaeIII | GTNAC | 8 cut(s) | 74, 160, 247, 333, 532, 628, 1273, 1614 |
| MbiI | CCGCTC | 1 cut(s) | 353 |
| MflI | RGATCY | 1 cut(s) | 1109 |
| MhlI | GDGCHC | 2 cut(s) | 714, 1845 |
| MlyI | GAGTC | 3 cut(s) | 244, 515, 866 |
| MmeI | TCCRAC | 2 cut(s) | 546, 1675 |
| MroXI | GAANNNNTTC | 2 cut(s) | 873, 2199 |
| MspA1I | CMGCKG | 3 cut(s) | 896, 1454, 1991 |
| MspCI | CTTAAG | 1 cut(s) | 1619 |
| MspI | CCGG | 6 cut(s) | 56, 72, 254, 308, 504, 1706 |
| Mva1269I | GAATGC | 2 cut(s) | 652, 1009 |
| MvnI | CGCG | 1 cut(s) | 488 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 87, 125, 709, 718, 815, 1460, 1778, 2048 |
| NdeI | CATATG | 1 cut(s) | 1510 |
| NheI | GCTAGC | 1 cut(s) | 805 |
| NlaIII | CATG | 4 cut(s) | 1017, 1402, 1675, 1862 |
| NlaIV | GGNNCC | 2 cut(s) | 144, 1423 |
| NmuCI | GTSAC | 5 cut(s) | 74, 160, 247, 333, 1273 |
| NspV | TTCGAA | 1 cut(s) | 33 |
| PaeR7I | CTCGAG | 1 cut(s) | 713 |
| PagI | TCATGA | 1 cut(s) | 1398 |
| PciSI | GCTCTTC | 1 cut(s) | 702 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 381, 405, 711, 1842 |
| PctI | GAATGC | 2 cut(s) | 652, 1009 |
| PdmI | GAANNNNTTC | 2 cut(s) | 873, 2199 |
| Ple19I | CGATCG | 1 cut(s) | 738 |
| PleI | GAGTC | 3 cut(s) | 244, 515, 865 |
| PpsI | GAGTC | 3 cut(s) | 244, 515, 865 |
| Psp124BI | GAGCTC | 2 cut(s) | 714, 1845 |
| Psp1406I | AACGTT | 1 cut(s) | 1077 |
| PspN4I | GGNNCC | 2 cut(s) | 144, 1423 |
| PstI | CTGCAG | 2 cut(s) | 1149, 1777 |
| PsuI | RGATCY | 1 cut(s) | 1109 |
| PvuI | CGATCG | 1 cut(s) | 738 |
| PvuII | CAGCTG | 2 cut(s) | 896, 1991 |
| RsaI | GTAC | 2 cut(s) | 1578, 1606 |
| RsaNI | GTAC | 2 cut(s) | 1577, 1605 |
| SacI | GAGCTC | 2 cut(s) | 714, 1845 |
| SapI | GCTCTTC | 1 cut(s) | 702 |
| SchI | GAGTC | 3 cut(s) | 244, 515, 866 |
| SduI | GDGCHC | 2 cut(s) | 714, 1845 |
| SfaNI | GCATC | 8 cut(s) | 406, 680, 745, 838, 928, 940, 1692, 1745 |
| SfcI | CTRYAG | 2 cut(s) | 1145, 1773 |
| Sfr274I | CTCGAG | 1 cut(s) | 713 |
| SfuI | TTCGAA | 1 cut(s) | 33 |
| SgrAI | CRCCGGYG | 1 cut(s) | 55 |
| SlaI | CTCGAG | 1 cut(s) | 713 |
| SmlI | CTYRAG | 7 cut(s) | 559, 713, 725, 1103, 1178, 1619, 2033 |
| SmoI | CTYRAG | 7 cut(s) | 559, 713, 725, 1103, 1178, 1619, 2033 |
| SspMI | CTAG | 2 cut(s) | 806, 1524 |
| SstI | GAGCTC | 2 cut(s) | 714, 1845 |
| StyI | CCWWGG | 1 cut(s) | 114 |
| TaaI | ACNGT | 4 cut(s) | 377, 538, 1964, 2164 |
| TaiI | ACGT | 3 cut(s) | 328, 1080, 1389 |
| TatI | WGTACW | 1 cut(s) | 1576 |
| TauI | GCSGC | 3 cut(s) | 122, 356, 761 |
| TscAI | CASTG | 4 cut(s) | 138, 180, 1345, 1969 |
| TseFI | GTSAC | 5 cut(s) | 74, 160, 247, 333, 1273 |
| TseI | GCWGC | 8 cut(s) | 620, 721, 785, 893, 1186, 1733, 1772, 1991 |
| Tsp45I | GTSAC | 5 cut(s) | 74, 160, 247, 333, 1273 |
| TspDTI | ATGAA | 9 cut(s) | 1002, 1008, 1142, 1188, 1387, 1473, 1660, 1678, 2145 |
| TspGWI | ACGGA | 6 cut(s) | 179, 221, 352, 430, 472, 950 |
| TspRI | CASTG | 4 cut(s) | 138, 180, 1345, 1969 |
| Vha464I | CTTAAG | 1 cut(s) | 1619 |
| XapI | RAATTY | 2 cut(s) | 1747, 1792 |
| XhoI | CTCGAG | 1 cut(s) | 713 |
| XmnI | GAANNNNTTC | 2 cut(s) | 873, 2199 |
| XspI | CTAG | 2 cut(s) | 806, 1524 |
| ZraI | GACGTC | 1 cut(s) | 326 |