Rh7DG311400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0014602
Physical Location & Seq
Reverse (-)
36503317 .. 36507111
3795 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG311400.1

Sequence Viewer

Length: 2205 bp
ATGGAGGAAGAAGAGGAAATGGATTCCCTGTTCGAGGGCATGGTGTTGTTCGACCCCACTTCCAATTCCAGTTCCGACTCACACCATCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCAGCAGAATCAGGACAACGCCCAAGATCCCAAACTTGAAATTGAAGCTCCGCCATCAGCATCATCATCTGAACCCCTCGACGAGAACCTCTTCTCCGACCTCACTGTCCAATTCGAAACCCCACCACCACCACCACCACTAGACCAAGACCAAGAAGGTCCGATCAAAACCACATCCAGACAGAATTCCAGTTCCCGGAAGAAAAAAAGAGCCGCCGGATTAAGAATCGGTTACGCCAGAGATGCCAACGCTCACTCTCTCTCTTTCGACGCCGATGACGTCATCATCGCCGACGGAACCGATTCGCTTCCCGAACCCAGCCCTTCTTCTGTATCAGTATCAGTACCAGTCCAATCCCAAGCCGAAGTCGAAAACGAACCCGAACCCGAAGCGGAAGCAGAACCCCAATCCGACGAAGCTGAAGCGACTCCGGAGCTCCGGTTGGATCAAAGCAAGGCGTTGATCGCCGAGAAGCTCGGCAGTGCTCGTCAGTTGGCGGCGTCTGTTTCCTCCGCCAGGAAGGACGCAATTGCGAGGAGGAGGACGGCGGCTGACAATCTCAATCTGGCCTCTGGCGATTACGCCAGTCTAGAGAAGCAGCTGGAAGAGGCCTGCGAGGCAGAGGATTTCGAGACGGCCGAAAGGCTTAGTGACAGCCTTGCTGCTGCTCAGGAGAAGAGGCAAGCTCTGTTGGCCGCACTCAGAGATGCTGAGGCTGAATGTGATGCTGTCGACTCCAAAATGCATGAGGTTCTCCAATCCCAGATCGCCGCAGAGGAACAATGCGCCTCTCTCCTCCAACACTTCGCAACTGATGCTTCAAATAATGCAGATTTGGTCTTGAAGGCAGCAGAGGAACTCTCTTCCACGGAAACAGACAAATGGCTTTCATCAACTGAAGCCTTGGAAGCCAAGAAGATGGAATTGGAAATTGAATCACATATAATTGGTGATGCAGGGCTTGTCTTAAACAGTTCTATTGAGACTTCAGTGGAGGATGACAAGAGAGAGAAAGAATCTCTCTGTAAGAAAAAGGAAACTCTTACGCACGAACTGGAGAAACTTCTTGCATTGGTGAGAGAGAAGGAACAGGAGATTGCACAAAATGATCGTGACATCCAGCAAGTTGAGGAAAAGATTGCTAATGTTCTCTCCGGCTTTGGGGAGATGCATTCCACTATTCAGGCCAAGTCTAGTAACTTGCAAGAAGCCCTTTCCCAGATACAGTTGGAGAGTGAAGCTCTGTCAACAAAAAAGACAGAAATCGATGCTGTCCTTACACAGGAGCAAGAGAGGGGAGCAAAGTTGAGGGAACTGGCCAGGGTTTCTGCAGAGGAAGCAGAGGCATACCAACAAGTTGCTGCTCTTAGAAAGAGTCTAATGTCCTCTATTTTGAAGTCCAGGGAAGATAAGGTCAGACTAGCAAAGACTGAGGAAAAGCTTTCCGAGGATGTTCAAAAGCTCCAACAGGATGTTTCTGCAGCAAGAACTTCACTTCAGGAACTGTCTTCAAGAAAGTCAAGCATTCAGCAAGATATAGCATCCTCTAAGCAGAAAATTATTTTCATAGATAAAAGAATCCCAGAGCTGGAAGCAGAAAAGAAAGTTGCTGCTACTGCAAGAAATTTCAAAGAAGCTGCACGAATAGCTGCCGAGGCCAAGTCATTGAATGTTGAAAAGGATGGTATACAGATTGACATGGAAAAGGCCATCTCAGAGCTTGAGAAGCTTGAGGAAGAGATTAAAGAGACTGTCAACAGATTGCAGGAGACTGAGGGGCACATTTTGTCCAAGGAAAAAGAGGTAGCAACAGCTAGGTTTCAAAGGTTGCTACTGGTATCTGGTATCGCTAAAGCAGAAAGAGAAGCTGCTTTGGAGTTGGGTGATCTTGAAGAAGCTAACCTGCTGCTTGCAGAGGCTGAAGCAGCAGACTCTGAAGCCAAGGAACTTGAACCTATATACAACTTCAAATTGGAAGAGACTGAAAGTCTACCAAAGCACTTTATGTCTATGGTGCTCATATCCAATCTTGGGAGGAAGCAGTTGGAAGAATTGGCAGCATCTGTTCAAGTTTCTTCAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UVR

Protein Analysis

734

Amino Acids

80.57

Weight (kDa)

4.6

Isoelectric Point (pI)

62.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014602)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G25070
fragaria_vesca FvH4_5g26850 FvH4_5g26850
malus_domestica MD04G1004600.v1.1
prunus_persica Prupe.1G004400_v2.0.a1
pyrus_communis pycom04g00470
rosa_chinensis RchiOBHm_Chr7g0217751
rosa_laevigata RLG00000002441
rosa_multiflora Rmu_sc0000202.1_g000023 Rmu_sc0006958.1_g000001
rosa_roxburghii Rroxscaffold_3G00241710
rosa_rugosa Rorug07G0171000
rosa_samantha Rh7AG311700 Rh7BG303600 Rh7CG330500 Rh7DG311400
rosa_wichuraiana Rw7G026450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 224
AatII GACGTC 1 cut(s) 402
Acc36I ACCTGC 1 cut(s) 2031
AccI GTMKAC 3 cut(s) 852, 1807, 2110
AccIII TCCGGA 1 cut(s) 550
AciI CCGC 8 cut(s) 170, 333, 512, 617, 633, 668, 816, 891
AclWI GGATC 2 cut(s) 140, 573
AcoI YGGCCR 3 cut(s) 756, 813, 1437
AcsI RAATTY 2 cut(s) 304, 1744
AcuI CTGAAG 7 cut(s) 561, 1038, 1092, 1601, 2061, 2076, 2181
AcyI GRCGYC 3 cut(s) 390, 399, 620
AfaI GTAC 1 cut(s) 465
AfiI CCNNNNNNNGG 7 cut(s) 34, 315, 636, 1281, 1402, 1708, 2151
AhdI GACNNNNNGTC 1 cut(s) 2106
AjnI CCWGG 3 cut(s) 635, 1439, 1520
AjuI GAANNNNNNNTTGG 2 cut(s) 1028, 1060
AloI GAACNNNNNNTCC 4 cut(s) 14, 46, 197, 229
Alw21I GWGCWC 3 cut(s) 558, 607, 2139
Alw26I GTCTC 5 cut(s) 746, 1097, 1862, 1883, 2093
AlwI GGATC 2 cut(s) 140, 573
AlwNI CAGNNNCTG 4 cut(s) 1624, 2039, 2054, 2183
Aor13HI TCCGGA 1 cut(s) 550
AoxI GGCC 8 cut(s) 687, 729, 756, 813, 1305, 1437, 1776, 1827
ApoI RAATTY 2 cut(s) 304, 1744
Asp700I GAANNNNTTC 2 cut(s) 209, 421
AspLEI GCGC 1 cut(s) 908
AspS9I GGNCC 1 cut(s) 278
AsuC2I CCSGG 1 cut(s) 316
AsuHPI GGTGA 3 cut(s) 1082, 1207, 2015
AsuII TTCGAA 1 cut(s) 234
AvaII GGWCC 1 cut(s) 278
BaeGI GKGCMC 1 cut(s) 1902
BalI TGGCCA 1 cut(s) 1439
BanII GRGCYC 1 cut(s) 558
BbsI GAAGAC 1 cut(s) 1620
Bbv12I GWGCWC 3 cut(s) 558, 607, 2139
BbvCI CCTCAGC 2 cut(s) 120, 831
BccI CCATC 5 cut(s) 93, 181, 1033, 1796, 1838
BceAI ACGGC 2 cut(s) 681, 771
BciT130I CCWGG 3 cut(s) 637, 1441, 1522
BcnI CCSGG 1 cut(s) 316
BcoDI GTCTC 5 cut(s) 746, 1097, 1862, 1883, 2093
BfaI CTAG 5 cut(s) 260, 710, 1314, 1541, 1935
BfmI CTRYAG 2 cut(s) 1449, 1599
BfuAI ACCTGC 1 cut(s) 2031
BglI GCCNNNNNGGC 1 cut(s) 737
Bme1390I CCNGG 4 cut(s) 316, 637, 1441, 1522
Bme18I GGWCC 1 cut(s) 278
BmeRI GACNNNNNGTC 1 cut(s) 2106
BmgT120I GGNCC 1 cut(s) 278
BmiI GGNNCC 1 cut(s) 418
BmrFI CCNGG 4 cut(s) 316, 637, 1441, 1522
BpiI GAAGAC 1 cut(s) 1620
BplI GAGNNNNNCTC 6 cut(s) 790, 822, 965, 997, 1345, 1377
BpmI CTGGAG 1 cut(s) 1196
Bpu10I CCTNAGC 3 cut(s) 120, 789, 831
Bpu14I TTCGAA 1 cut(s) 234
BpuEI CTTGAG 2 cut(s) 1862, 1871
BpuMI CCSGG 1 cut(s) 316
Bsa29I ATCGAT 1 cut(s) 1386
BsaHI GRCGYC 3 cut(s) 390, 399, 620
BsaJI CCNNGG 8 cut(s) 987, 1023, 1440, 1521, 1566, 1773, 1911, 2061
BsaWI WCCGGW 2 cut(s) 550, 558
BsaXI ACNNNNNCTCC 4 cut(s) 197, 227, 545, 575
Bsc4I CCNNNNNNNGG 7 cut(s) 34, 315, 636, 1281, 1402, 1708, 2151
Bse1I ACTGG 7 cut(s) 69, 309, 467, 705, 1179, 1440, 1959
BseAI TCCGGA 1 cut(s) 550
BseBI CCWGG 3 cut(s) 637, 1441, 1522
BseCI ATCGAT 1 cut(s) 1386
BseDI CCNNGG 8 cut(s) 987, 1023, 1440, 1521, 1566, 1773, 1911, 2061
BseGI GGATG 8 cut(s) 85, 293, 1123, 1236, 1576, 1597, 1661, 1807
BseLI CCNNNNNNNGG 7 cut(s) 34, 315, 636, 1281, 1402, 1708, 2151
BseMII CTCAG 7 cut(s) 134, 803, 822, 835, 1542, 1848, 1884
BseNI ACTGG 7 cut(s) 69, 309, 467, 705, 1179, 1440, 1959
BseSI GKGCMC 1 cut(s) 1902
BseX3I CGGCCG 1 cut(s) 756
BseYI CCCAGC 1 cut(s) 437
BsgI GTGCAG 1 cut(s) 1743
Bsh1285I CGRYCG 1 cut(s) 759
BshFI GGCC 8 cut(s) 689, 731, 758, 815, 1307, 1439, 1778, 1829
BshVI ATCGAT 1 cut(s) 1386
BsiEI CGRYCG 1 cut(s) 759
BsiHKAI GWGCWC 3 cut(s) 558, 607, 2139
BsiSI CCGG 5 cut(s) 316, 336, 551, 559, 1275
BslI CCNNNNNNNGG 7 cut(s) 34, 315, 636, 1281, 1402, 1708, 2151
BsmAI GTCTC 5 cut(s) 746, 1097, 1862, 1883, 2093
BsmBI CGTCTC 1 cut(s) 746
BsmI GAATGC 2 cut(s) 1291, 1644
BsnI GGCC 8 cut(s) 689, 731, 758, 815, 1307, 1439, 1778, 1829
Bsp119I TTCGAA 1 cut(s) 234
Bsp1286I GDGCHC 4 cut(s) 558, 607, 1902, 2139
Bsp13I TCCGGA 1 cut(s) 550
Bsp143I GATC 7 cut(s) 145, 282, 565, 582, 885, 1228, 2005
BspACI CCGC 8 cut(s) 170, 333, 512, 617, 633, 668, 816, 891
BspANI GGCC 8 cut(s) 689, 731, 758, 815, 1307, 1439, 1778, 1829
BspCNI CTCAG 7 cut(s) 133, 802, 823, 834, 1543, 1847, 1885
BspDI ATCGAT 1 cut(s) 1386
BspEI TCCGGA 1 cut(s) 550
BspLI GGNNCC 1 cut(s) 418
BspMAI CTGCAG 2 cut(s) 1453, 1603
BspMI ACCTGC 1 cut(s) 2031
BspPI GGATC 2 cut(s) 140, 573
BspT104I TTCGAA 1 cut(s) 234
BsrI ACTGG 7 cut(s) 69, 309, 467, 705, 1179, 1440, 1959
BssECI CCNNGG 8 cut(s) 987, 1023, 1440, 1521, 1566, 1773, 1911, 2061
BssMI GATC 7 cut(s) 145, 282, 565, 582, 885, 1228, 2005
BssNAI GTATAC 1 cut(s) 1808
BssNI GRCGYC 3 cut(s) 390, 399, 620
BssT1I CCWWGG 3 cut(s) 1023, 1911, 2061
Bst1107I GTATAC 1 cut(s) 1808
Bst2UI CCWGG 3 cut(s) 637, 1441, 1522
Bst4CI ACNGT 5 cut(s) 226, 1094, 1347, 1626, 1873
Bst6I CTCTTC 7 cut(s) 6, 215, 720, 791, 988, 1851, 2091
BstACI GRCGYC 3 cut(s) 390, 399, 620
BstAPI GCANNNNNTGC 1 cut(s) 935
BstBI TTCGAA 1 cut(s) 234
BstC8I GCNNGC 3 cut(s) 733, 804, 2031
BstDSI CCRYGG 1 cut(s) 987
BstENI CCTNNNNNAGG 3 cut(s) 32, 634, 1400
BstF5I GGATG 8 cut(s) 85, 293, 1123, 1236, 1576, 1597, 1661, 1807
BstHHI GCGC 1 cut(s) 908
BstKTI GATC 7 cut(s) 148, 285, 568, 585, 888, 1231, 2008
BstMAI GTCTC 5 cut(s) 746, 1097, 1862, 1883, 2093
BstMBI GATC 7 cut(s) 145, 282, 565, 582, 885, 1228, 2005
BstMCI CGRYCG 1 cut(s) 759
BstNI CCWGG 3 cut(s) 637, 1441, 1522
BstSCI CCNGG 4 cut(s) 314, 635, 1439, 1520
BstSFI CTRYAG 2 cut(s) 1449, 1599
BstSLI GKGCMC 1 cut(s) 1902
BstV2I GAAGAC 1 cut(s) 1620
BstX2I RGATCY 1 cut(s) 145
BstXI CCANNNNNNTGG 1 cut(s) 1039
BstYI RGATCY 1 cut(s) 145
BstZ17I GTATAC 1 cut(s) 1808
BstZI CGGCCG 1 cut(s) 756
Bsu15I ATCGAT 1 cut(s) 1386
BsuRI GGCC 8 cut(s) 689, 731, 758, 815, 1307, 1439, 1778, 1829
BsuTUI ATCGAT 1 cut(s) 1386
BtgI CCRYGG 1 cut(s) 987
BtgZI GCGATG 1 cut(s) 391
BtsCI GGATG 8 cut(s) 85, 293, 1123, 1236, 1576, 1597, 1661, 1807
BtsI GCAGTG 1 cut(s) 607
BtsIMutI CAGTG 3 cut(s) 222, 607, 1116
BveI ACCTGC 1 cut(s) 2031
Cac8I GCNNGC 3 cut(s) 733, 804, 2031
CaiI CAGNNNCTG 4 cut(s) 1624, 2039, 2054, 2183
CfoI GCGC 1 cut(s) 908
Cfr13I GGNCC 1 cut(s) 278
ClaI ATCGAT 1 cut(s) 1386
CseI GACGC 3 cut(s) 398, 609, 653
Csp6I GTAC 1 cut(s) 464
CviAII CATG 4 cut(s) 40, 866, 1819, 2202
CviQI GTAC 1 cut(s) 464
DpnI GATC 7 cut(s) 147, 284, 567, 584, 887, 1230, 2007
DpnII GATC 7 cut(s) 145, 282, 565, 582, 885, 1228, 2005
DrdI GACNNNNNNGTC 1 cut(s) 224
DriI GACNNNNNGTC 1 cut(s) 2106
DseDI GACNNNNNNGTC 1 cut(s) 224
EaeI YGGCCR 3 cut(s) 756, 813, 1437
EagI CGGCCG 1 cut(s) 756
Eam1104I CTCTTC 7 cut(s) 6, 215, 720, 791, 988, 1851, 2091
Eam1105I GACNNNNNGTC 1 cut(s) 2106
EarI CTCTTC 7 cut(s) 6, 215, 720, 791, 988, 1851, 2091
EciI GGCGGA 2 cut(s) 159, 622
Ecl136II GAGCTC 1 cut(s) 556
EclXI CGGCCG 1 cut(s) 756
Eco130I CCWWGG 3 cut(s) 1023, 1911, 2061
Eco147I AGGCCT 1 cut(s) 731
Eco24I GRGCYC 1 cut(s) 558
Eco47I GGWCC 1 cut(s) 278
Eco52I CGGCCG 1 cut(s) 756
Eco53kI GAGCTC 1 cut(s) 556
Eco57I CTGAAG 7 cut(s) 561, 1038, 1092, 1601, 2061, 2076, 2181
EcoICRI GAGCTC 1 cut(s) 556
EcoNI CCTNNNNNAGG 3 cut(s) 32, 634, 1400
EcoRI GAATTC 1 cut(s) 304
EcoRII CCWGG 3 cut(s) 635, 1439, 1520
EcoT14I CCWWGG 3 cut(s) 1023, 1911, 2061
EcoT22I ATGCAT 2 cut(s) 867, 1293
EcoT38I GRGCYC 1 cut(s) 558
ErhI CCWWGG 3 cut(s) 1023, 1911, 2061
Esp3I CGTCTC 1 cut(s) 746
FaeI CATG 4 cut(s) 43, 869, 1822, 2205
FalI AAGNNNNNCTT 2 cut(s) 1317, 1349
FatI CATG 4 cut(s) 39, 865, 1818, 2201
FblI GTMKAC 3 cut(s) 852, 1807, 2110
FokI GGATG 8 cut(s) 72, 280, 1130, 1223, 1583, 1604, 1648, 1814
FriOI GRGCYC 1 cut(s) 558
FspBI CTAG 5 cut(s) 260, 710, 1314, 1541, 1935
GlaI GCGC 1 cut(s) 907
GsaI CCCAGC 1 cut(s) 441
GsuI CTGGAG 1 cut(s) 1196
HaeIII GGCC 8 cut(s) 689, 731, 758, 815, 1307, 1439, 1778, 1829
HapII CCGG 5 cut(s) 316, 336, 551, 559, 1275
HgaI GACGC 3 cut(s) 398, 609, 653
HhaI GCGC 1 cut(s) 908
Hin1I GRCGYC 3 cut(s) 390, 399, 620
Hin1II CATG 4 cut(s) 43, 869, 1822, 2205
Hin6I GCGC 1 cut(s) 906
HinP1I GCGC 1 cut(s) 906
HincII GTYRAC 3 cut(s) 853, 1368, 1876
HindII GTYRAC 3 cut(s) 853, 1368, 1876
HindIII AAGCTT 2 cut(s) 1559, 1847
HpaII CCGG 5 cut(s) 316, 336, 551, 559, 1275
HphI GGTGA 3 cut(s) 1082, 1207, 2015
Hpy166II GTNNAC 5 cut(s) 853, 1368, 1808, 1876, 2111
Hpy8I GTNNAC 5 cut(s) 853, 1368, 1808, 1876, 2111
Hpy99I CGWCG 4 cut(s) 203, 392, 416, 536
HpyAV CCTTC 6 cut(s) 99, 269, 453, 634, 958, 1198
HpyCH4III ACNGT 5 cut(s) 226, 1094, 1347, 1626, 1873
HpyCH4IV ACGT 1 cut(s) 399
HpySE526I ACGT 1 cut(s) 399
Hsp92I GRCGYC 3 cut(s) 390, 399, 620
Hsp92II CATG 4 cut(s) 43, 869, 1822, 2205
HspAI GCGC 1 cut(s) 906
Kpn2I TCCGGA 1 cut(s) 550
Kzo9I GATC 7 cut(s) 145, 282, 565, 582, 885, 1228, 2005
LmnI GCTCC 6 cut(s) 172, 553, 561, 1405, 1418, 1587
MaeI CTAG 5 cut(s) 260, 710, 1314, 1541, 1935
MaeII ACGT 1 cut(s) 399
MaeIII GTNAC 4 cut(s) 350, 770, 1232, 1316
MalI GATC 7 cut(s) 147, 284, 567, 584, 887, 1230, 2007
MboI GATC 7 cut(s) 145, 282, 565, 582, 885, 1228, 2005
MfeI CAATTG 1 cut(s) 648
MflI RGATCY 1 cut(s) 145
MhlI GDGCHC 4 cut(s) 558, 607, 1902, 2139
MlsI TGGCCA 1 cut(s) 1439
MluNI TGGCCA 1 cut(s) 1439
MlyI GAGTC 5 cut(s) 71, 541, 848, 1504, 2045
MmeI TCCRAC 8 cut(s) 99, 240, 543, 555, 943, 1329, 1609, 2145
Mox20I TGGCCA 1 cut(s) 1439
Mph1103I ATGCAT 2 cut(s) 867, 1293
MroI TCCGGA 1 cut(s) 550
MroXI GAANNNNTTC 2 cut(s) 209, 421
MscI TGGCCA 1 cut(s) 1439
MseI TTAA 3 cut(s) 341, 1088, 1863
Msp20I TGGCCA 1 cut(s) 1439
MspA1I CMGCKG 1 cut(s) 721
MspI CCGG 5 cut(s) 316, 336, 551, 559, 1275
MspR9I CCNGG 4 cut(s) 316, 637, 1441, 1522
MunI CAATTG 1 cut(s) 648
Mva1269I GAATGC 2 cut(s) 1291, 1644
MvaI CCWGG 3 cut(s) 637, 1441, 1522
NciI CCSGG 1 cut(s) 316
NdeII GATC 7 cut(s) 145, 282, 565, 582, 885, 1228, 2005
NlaIII CATG 4 cut(s) 43, 869, 1822, 2205
NlaIV GGNNCC 1 cut(s) 418
NmeAIII GCCGAG 3 cut(s) 576, 613, 1798
NmuCI GTSAC 2 cut(s) 770, 1232
NsiI ATGCAT 2 cut(s) 867, 1293
NspV TTCGAA 1 cut(s) 234
PceI AGGCCT 1 cut(s) 731
PcsI WCGNNNNNNNCGW 2 cut(s) 396, 756
PctI GAATGC 2 cut(s) 1291, 1644
PdmI GAANNNNTTC 2 cut(s) 209, 421
PfeI GAWTC 7 cut(s) 23, 127, 345, 422, 1055, 1136, 1698
PfoI TCCNGGA 1 cut(s) 314
PleI GAGTC 5 cut(s) 71, 541, 848, 1503, 2045
PpsI GAGTC 5 cut(s) 71, 541, 848, 1503, 2045
Psp124BI GAGCTC 1 cut(s) 558
Psp6I CCWGG 3 cut(s) 635, 1439, 1520
PspFI CCCAGC 1 cut(s) 437
PspGI CCWGG 3 cut(s) 635, 1439, 1520
PspN4I GGNNCC 1 cut(s) 418
PspPI GGNCC 1 cut(s) 278
PstI CTGCAG 2 cut(s) 1453, 1603
PstNI CAGNNNCTG 4 cut(s) 1624, 2039, 2054, 2183
PsuI RGATCY 1 cut(s) 145
PvuII CAGCTG 1 cut(s) 721
RsaI GTAC 1 cut(s) 465
RsaNI GTAC 1 cut(s) 464
SacI GAGCTC 1 cut(s) 558
SalI GTCGAC 1 cut(s) 851
SaqAI TTAA 3 cut(s) 341, 1088, 1863
Sau3AI GATC 7 cut(s) 145, 282, 565, 582, 885, 1228, 2005
Sau96I GGNCC 1 cut(s) 278
SchI GAGTC 5 cut(s) 71, 541, 848, 1504, 2045
ScrFI CCNGG 4 cut(s) 316, 637, 1441, 1522
SduI GDGCHC 4 cut(s) 558, 607, 1902, 2139
SfcI CTRYAG 2 cut(s) 1449, 1599
SfuI TTCGAA 1 cut(s) 234
SinI GGWCC 1 cut(s) 278
SmlI CTYRAG 2 cut(s) 1841, 1850
SmoI CTYRAG 2 cut(s) 1841, 1850
SseBI AGGCCT 1 cut(s) 731
SsiI CCGC 8 cut(s) 170, 333, 512, 617, 633, 668, 816, 891
SspMI CTAG 5 cut(s) 260, 710, 1314, 1541, 1935
SstI GAGCTC 1 cut(s) 558
StuI AGGCCT 1 cut(s) 731
StyD4I CCNGG 4 cut(s) 314, 635, 1439, 1520
StyI CCWWGG 3 cut(s) 1023, 1911, 2061
TaaI ACNGT 5 cut(s) 226, 1094, 1347, 1626, 1873
TaiI ACGT 1 cut(s) 402
TaqI TCGA 9 cut(s) 33, 51, 198, 234, 387, 489, 750, 852, 1386
TauI GCSGC 5 cut(s) 335, 620, 671, 818, 893
TfiI GAWTC 7 cut(s) 23, 127, 345, 422, 1055, 1136, 1698
Tru1I TTAA 3 cut(s) 341, 1088, 1863
Tru9I TTAA 3 cut(s) 341, 1088, 1863
TscAI CASTG 3 cut(s) 229, 607, 1116
TseFI GTSAC 2 cut(s) 770, 1232
Tsp45I GTSAC 2 cut(s) 770, 1232
TspDTI ATGAA 2 cut(s) 999, 1675
TspGWI ACGGA 2 cut(s) 429, 1004
TspRI CASTG 3 cut(s) 229, 607, 1116
VpaK11BI GGWCC 1 cut(s) 278
XagI CCTNNNNNAGG 3 cut(s) 32, 634, 1400
XapI RAATTY 2 cut(s) 304, 1744
XbaI TCTAGA 1 cut(s) 709
XmiI GTMKAC 3 cut(s) 852, 1807, 2110
XmnI GAANNNNTTC 2 cut(s) 209, 421
XspI CTAG 5 cut(s) 260, 710, 1314, 1541, 1935
ZraI GACGTC 1 cut(s) 400
Zsp2I ATGCAT 2 cut(s) 867, 1293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.