RLG00000002441

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0014602
Physical Location & Seq
Forward (+)
34242690 .. 34245679
2990 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002441

Sequence Viewer

Length: 2220 bp
ATGGAGGAAGAAGAGGAAATGGATTCCCTGTTTGAGGGCATGGTGTTGTTCGACCCCACTTCCAATTCCAGTTCCGACTCACACCATCCTCCTCCTCCTCCTCAGCAGAATCAGGACAACCACGCCCAAGATCCCAAACTTGAAATTGAAGCTCCGCCATCATCATCATCTGAACCCCTCGACGAGAACCTCTTCTCCGACCTCACTGTCCAATTCCAAACCCCACCACCACCACCACCACCACTAGACCAAGACCGAGAAGATCCGATCAAAACCACATCCAGACAGAATTCGAGTTCCCGGAAGAAAAAAAGAGCCGCCGGATTAAGAATCGGTTACGCCAGAGATGCCAACGCTCACTCTCACGATCGCTCTCTCTCTTTCGACGCTGATGACGTCATCATCACCGACGGAATCGATTCGCTTCCCGAACCCAGCCCTTCTTCTGTATCTGTATCAGTACCAGTCCAATCCCAACCCGAACCCGAAGTCGAAAACGAACCCGAAACTGAAGTTGAACCCAAAGCTGAAGCAGAACCCCAATCCAACGAAGCTGAAGCGACTCCGGAGCTCCGGTTGGATCAAAGAAAGGCCTTGATCGCCGAGAAGCTGAGCAGTGCTCGTCAGTTGGCGGCGTCTGTTTCCTCCGCCAGGAAGGACGCAATTGCAAGGAGGAGGACGGCGGCTGACAATCTCAATCTGGCTTCTGGCGATTACGCCAGTCTAGAGAAGCAGCTGGAAGAGGCCTGCGAGGCAGAGGATTTCGAGACGGCCGAAAGGCTTAGTGACAGCCTTGCCGCTGCTCAGGAGAAGAGGCAAGCTCTGTTGGCTGCACTCAGAGATGCTGAGGCTGAATGTGATTCTGTCGACTCCAAAATGCATGAGGTTCTCCAATCCCAGATCGCCGCAGAGGAACATTGTGCTTCTCTGCTCCAACACTTCGCAACTGATGCTTCAAATAATGCAGATTTGGTCTCAAAGGTGGCAGAGGAACTCTCTTCCACAGAAGCAGACAAATGGCTTTCATCAACTGAAGCCTTGGAAGCCAAGAAGATGGAATTGGAAATTGAATCACATGTAATTGGTGAAGCAGGGCTTGTCTTAAACAGTTCCATTGAGACTTCAGTGGAGGATGACAAGAGAGAGAAAGAATCTCTCTGTAAGAAAAAGGAAACTCTTATGGACGAACTGGAGAAACTTCTTGCATTGGTGAGAGAGAAGGAACAGGAGATTGCACAAAATGATCGTGACATCCAACAAGTTGAGGAAAAGATAGCTAATGTTCTCTCCGGCTTCGGGGAGATGCAATCTACTATTCAGGCCAAGTCTAGTAACTTGGAAGAAGCCCTTTCCCAGATACAGTTGGAGAGTGAAGCTCTGTCAACAAAAAAGACAGAAATCGATGCTGTTCTTACTCAGGAGCAAGAGAGGGGAGCAAAGTTGAGGGAACTGGCCAGGGTTTCTGCAGAGGAAGCAGAGGCATATCAACAAGTTGCTGCTCTTAGAAAGAGTCTAATGTCCTCTATTTTGAAGTCCAGGGAAGATAAGGTCAGACTAGCAAAGACTGAGGAAAAGCTTTCCGAGGATGTTCAAAAGCTCCAACAGGATGTTTCTGCAGCAAGAACTTCACTTCAGGAACTGTCTTCAAGAAAGTCAAGCATTCAGCAAGATATAGCATCCTCTAAGCAGAAAATTATTTTCATAGATAAAAGAATCCCAGAGCTGGAAGCAGAAAAGAAAGTTGCTGCTACTGCAAGAAATTTCAAAGAAGCTGCACGAATAGCTGCCGAGGCCAAGTCATTGAATGTTGAAAAGGATGGTATACAGATTGACATGGAAAAGGCCATCTCAGAGCTTGAGAAGCTTGAGGAAGAGATTAAAGAGACTGTCAACAGATTGCAGGAGACTGAGGGGCACATTTTGTCCAAGGAAAAGGAGGTAGCAACGGCTAGGTTTCAAAGGTTGCTACTGGTATCTGGTATTGCTAAAGCAGAAAGAGAAGCTGCTTTGGAGTTGGGTGATCTTGAAGAAGCTAACCTGCTGCTTGCAGAGGCTGAAGCAGCAGACTCTGAAGCCAAGGAACTTGAACCTATATACAACTTCAAATTGGAAGAGATTGAAAGTCTACCAAAGCACTTTATGTCTATGGTGCTCATATCCAATCTTGGGAGGAAGCAGTTGGAAGAATTGGCAGCATCTGTTCAAGTTTCTTCAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UVR

Protein Analysis

740

Amino Acids

81.6

Weight (kDa)

4.63

Isoelectric Point (pI)

60.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014602)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G25070
fragaria_vesca FvH4_5g26850 FvH4_5g26850
malus_domestica MD04G1004600.v1.1
prunus_persica Prupe.1G004400_v2.0.a1
pyrus_communis pycom04g00470
rosa_chinensis RchiOBHm_Chr7g0217751
rosa_laevigata RLG00000002441
rosa_multiflora Rmu_sc0000202.1_g000023 Rmu_sc0006958.1_g000001
rosa_roxburghii Rroxscaffold_3G00241710
rosa_rugosa Rorug07G0171000
rosa_samantha Rh7AG311700 Rh7BG303600 Rh7CG330500 Rh7DG311400
rosa_wichuraiana Rw7G026450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 206
AatII GACGTC 1 cut(s) 399
Acc36I ACCTGC 1 cut(s) 2046
AccI GTMKAC 3 cut(s) 867, 1822, 2125
AccIII TCCGGA 1 cut(s) 565
AciI CCGC 7 cut(s) 155, 318, 632, 648, 683, 798, 906
AclWI GGATC 3 cut(s) 125, 257, 588
AcoI YGGCCR 2 cut(s) 771, 1452
AcsI RAATTY 2 cut(s) 289, 1759
AcuI CTGAAG 9 cut(s) 531, 549, 576, 1053, 1107, 1616, 2076, 2091, 2196
AcyI GRCGYC 2 cut(s) 396, 635
AfaI GTAC 1 cut(s) 462
AfiI CCNNNNNNNGG 5 cut(s) 34, 651, 1296, 1723, 2166
AflIII ACRYGT 1 cut(s) 1075
AjnI CCWGG 3 cut(s) 650, 1454, 1535
AjuI GAANNNNNNNTTGG 2 cut(s) 1043, 1075
AloI GAACNNNNNNTCC 2 cut(s) 179, 211
Alw21I GWGCWC 3 cut(s) 573, 622, 2154
Alw26I GTCTC 5 cut(s) 761, 979, 1112, 1877, 1898
AlwI GGATC 3 cut(s) 125, 257, 588
AlwNI CAGNNNCTG 4 cut(s) 1639, 2054, 2069, 2198
Aor13HI TCCGGA 1 cut(s) 565
AoxI GGCC 7 cut(s) 591, 744, 771, 1320, 1452, 1791, 1842
ApoI RAATTY 2 cut(s) 289, 1759
ArsI GACNNNNNNTTYG 2 cut(s) 474, 506
Asp700I GAANNNNTTC 2 cut(s) 191, 418
AsuC2I CCSGG 1 cut(s) 301
AsuHPI GGTGA 4 cut(s) 397, 1097, 1222, 2030
BaeGI GKGCMC 1 cut(s) 1917
BalI TGGCCA 1 cut(s) 1454
BanII GRGCYC 1 cut(s) 573
BbsI GAAGAC 1 cut(s) 1635
Bbv12I GWGCWC 3 cut(s) 573, 622, 2154
BbvCI CCTCAGC 2 cut(s) 102, 846
BccI CCATC 5 cut(s) 93, 166, 1048, 1811, 1853
BceAI ACGGC 3 cut(s) 696, 786, 1962
BciT130I CCWGG 3 cut(s) 652, 1456, 1537
BcnI CCSGG 1 cut(s) 301
BcoDI GTCTC 5 cut(s) 761, 979, 1112, 1877, 1898
BfaI CTAG 5 cut(s) 245, 725, 1329, 1556, 1950
BfmI CTRYAG 2 cut(s) 1464, 1614
BfuAI ACCTGC 1 cut(s) 2046
BglI GCCNNNNNGGC 1 cut(s) 752
BlpI GCTNAGC 1 cut(s) 611
Bme1390I CCNGG 4 cut(s) 301, 652, 1456, 1537
BmrFI CCNGG 4 cut(s) 301, 652, 1456, 1537
BmsI GCATC 7 cut(s) 337, 832, 940, 1293, 1393, 1685, 2204
BpiI GAAGAC 1 cut(s) 1635
BplI GAGNNNNNCTC 8 cut(s) 604, 636, 805, 837, 980, 1012, 1360, 1392
BpmI CTGGAG 1 cut(s) 1211
Bpu10I CCTNAGC 3 cut(s) 102, 804, 846
Bpu1102I GCTNAGC 1 cut(s) 611
BpuEI CTTGAG 2 cut(s) 1877, 1886
BpuMI CCSGG 1 cut(s) 301
Bsa29I ATCGAT 2 cut(s) 417, 1401
BsaHI GRCGYC 2 cut(s) 396, 635
BsaI GGTCTC 1 cut(s) 979
BsaJI CCNNGG 7 cut(s) 1038, 1455, 1536, 1581, 1788, 1926, 2076
BsaWI WCCGGW 2 cut(s) 565, 573
BsaXI ACNNNNNCTCC 4 cut(s) 179, 209, 560, 590
Bsc4I CCNNNNNNNGG 5 cut(s) 34, 651, 1296, 1723, 2166
Bse1I ACTGG 6 cut(s) 69, 464, 720, 1194, 1455, 1974
BseAI TCCGGA 1 cut(s) 565
BseBI CCWGG 3 cut(s) 652, 1456, 1537
BseCI ATCGAT 2 cut(s) 417, 1401
BseDI CCNNGG 7 cut(s) 1038, 1455, 1536, 1581, 1788, 1926, 2076
BseGI GGATG 8 cut(s) 85, 278, 1138, 1251, 1591, 1612, 1676, 1822
BseLI CCNNNNNNNGG 5 cut(s) 34, 651, 1296, 1723, 2166
BseMII CTCAG 9 cut(s) 116, 602, 818, 837, 850, 1430, 1557, 1863, 1899
BseNI ACTGG 6 cut(s) 69, 464, 720, 1194, 1455, 1974
BseRI GAGGAG 5 cut(s) 81, 84, 87, 90, 688
BseSI GKGCMC 1 cut(s) 1917
BseX3I CGGCCG 1 cut(s) 771
BseYI CCCAGC 1 cut(s) 434
BsgI GTGCAG 2 cut(s) 816, 1758
Bsh1285I CGRYCG 2 cut(s) 370, 774
BshFI GGCC 7 cut(s) 593, 746, 773, 1322, 1454, 1793, 1844
BshVI ATCGAT 2 cut(s) 417, 1401
BsiEI CGRYCG 2 cut(s) 370, 774
BsiHKAI GWGCWC 3 cut(s) 573, 622, 2154
BsiSI CCGG 5 cut(s) 301, 321, 566, 574, 1290
BslI CCNNNNNNNGG 5 cut(s) 34, 651, 1296, 1723, 2166
BsmAI GTCTC 5 cut(s) 761, 979, 1112, 1877, 1898
BsmBI CGTCTC 1 cut(s) 761
BsmI GAATGC 1 cut(s) 1659
BsnI GGCC 7 cut(s) 593, 746, 773, 1322, 1454, 1793, 1844
Bso31I GGTCTC 1 cut(s) 979
Bsp1286I GDGCHC 4 cut(s) 573, 622, 1917, 2154
Bsp13I TCCGGA 1 cut(s) 565
Bsp143I GATC 9 cut(s) 130, 262, 267, 367, 580, 597, 900, 1243, 2020
Bsp1720I GCTNAGC 1 cut(s) 611
BspACI CCGC 7 cut(s) 155, 318, 632, 648, 683, 798, 906
BspANI GGCC 7 cut(s) 593, 746, 773, 1322, 1454, 1793, 1844
BspCNI CTCAG 9 cut(s) 115, 603, 817, 838, 849, 1429, 1558, 1862, 1900
BspDI ATCGAT 2 cut(s) 417, 1401
BspEI TCCGGA 1 cut(s) 565
BspMAI CTGCAG 2 cut(s) 1468, 1618
BspMI ACCTGC 1 cut(s) 2046
BspPI GGATC 3 cut(s) 125, 257, 588
BspTNI GGTCTC 1 cut(s) 979
BsrI ACTGG 6 cut(s) 69, 464, 720, 1194, 1455, 1974
BssECI CCNNGG 7 cut(s) 1038, 1455, 1536, 1581, 1788, 1926, 2076
BssMI GATC 9 cut(s) 130, 262, 267, 367, 580, 597, 900, 1243, 2020
BssNAI GTATAC 1 cut(s) 1823
BssNI GRCGYC 2 cut(s) 396, 635
BssT1I CCWWGG 3 cut(s) 1038, 1926, 2076
Bst1107I GTATAC 1 cut(s) 1823
Bst2UI CCWGG 3 cut(s) 652, 1456, 1537
Bst4CI ACNGT 5 cut(s) 208, 1109, 1362, 1641, 1888
Bst6I CTCTTC 7 cut(s) 6, 197, 735, 806, 1003, 1866, 2106
BstACI GRCGYC 2 cut(s) 396, 635
BstAPI GCANNNNNTGC 1 cut(s) 950
BstC8I GCNNGC 3 cut(s) 748, 819, 2046
BstENI CCTNNNNNAGG 2 cut(s) 32, 649
BstF5I GGATG 8 cut(s) 85, 278, 1138, 1251, 1591, 1612, 1676, 1822
BstKTI GATC 9 cut(s) 133, 265, 270, 370, 583, 600, 903, 1246, 2023
BstMAI GTCTC 5 cut(s) 761, 979, 1112, 1877, 1898
BstMBI GATC 9 cut(s) 130, 262, 267, 367, 580, 597, 900, 1243, 2020
BstMCI CGRYCG 2 cut(s) 370, 774
BstNI CCWGG 3 cut(s) 652, 1456, 1537
BstNSI RCATGY 1 cut(s) 1079
BstSCI CCNGG 4 cut(s) 299, 650, 1454, 1535
BstSFI CTRYAG 2 cut(s) 1464, 1614
BstSLI GKGCMC 1 cut(s) 1917
BstV2I GAAGAC 1 cut(s) 1635
BstX2I RGATCY 2 cut(s) 130, 262
BstXI CCANNNNNNTGG 1 cut(s) 1054
BstYI RGATCY 2 cut(s) 130, 262
BstZ17I GTATAC 1 cut(s) 1823
BstZI CGGCCG 1 cut(s) 771
Bsu15I ATCGAT 2 cut(s) 417, 1401
BsuRI GGCC 7 cut(s) 593, 746, 773, 1322, 1454, 1793, 1844
BsuTUI ATCGAT 2 cut(s) 417, 1401
BtsCI GGATG 8 cut(s) 85, 278, 1138, 1251, 1591, 1612, 1676, 1822
BtsI GCAGTG 1 cut(s) 622
BtsIMutI CAGTG 3 cut(s) 204, 622, 1131
BveI ACCTGC 1 cut(s) 2046
Cac8I GCNNGC 3 cut(s) 748, 819, 2046
CaiI CAGNNNCTG 4 cut(s) 1639, 2054, 2069, 2198
ClaI ATCGAT 2 cut(s) 417, 1401
CseI GACGC 3 cut(s) 395, 624, 668
Csp6I GTAC 1 cut(s) 461
CviAII CATG 5 cut(s) 40, 881, 1076, 1834, 2217
CviQI GTAC 1 cut(s) 461
DpnI GATC 9 cut(s) 132, 264, 269, 369, 582, 599, 902, 1245, 2022
DpnII GATC 9 cut(s) 130, 262, 267, 367, 580, 597, 900, 1243, 2020
DrdI GACNNNNNNGTC 1 cut(s) 206
DseDI GACNNNNNNGTC 1 cut(s) 206
EaeI YGGCCR 2 cut(s) 771, 1452
EagI CGGCCG 1 cut(s) 771
Eam1104I CTCTTC 7 cut(s) 6, 197, 735, 806, 1003, 1866, 2106
EarI CTCTTC 7 cut(s) 6, 197, 735, 806, 1003, 1866, 2106
EciI GGCGGA 2 cut(s) 144, 637
Ecl136II GAGCTC 1 cut(s) 571
EclXI CGGCCG 1 cut(s) 771
Eco130I CCWWGG 3 cut(s) 1038, 1926, 2076
Eco147I AGGCCT 2 cut(s) 593, 746
Eco24I GRGCYC 1 cut(s) 573
Eco31I GGTCTC 1 cut(s) 979
Eco52I CGGCCG 1 cut(s) 771
Eco53kI GAGCTC 1 cut(s) 571
Eco57I CTGAAG 9 cut(s) 531, 549, 576, 1053, 1107, 1616, 2076, 2091, 2196
EcoICRI GAGCTC 1 cut(s) 571
EcoNI CCTNNNNNAGG 2 cut(s) 32, 649
EcoRI GAATTC 1 cut(s) 289
EcoRII CCWGG 3 cut(s) 650, 1454, 1535
EcoT14I CCWWGG 3 cut(s) 1038, 1926, 2076
EcoT22I ATGCAT 1 cut(s) 882
EcoT38I GRGCYC 1 cut(s) 573
ErhI CCWWGG 3 cut(s) 1038, 1926, 2076
Esp3I CGTCTC 1 cut(s) 761
FaeI CATG 5 cut(s) 43, 884, 1079, 1837, 2220
FalI AAGNNNNNCTT 4 cut(s) 1080, 1112, 1332, 1364
FatI CATG 5 cut(s) 39, 880, 1075, 1833, 2216
FblI GTMKAC 3 cut(s) 867, 1822, 2125
FokI GGATG 8 cut(s) 72, 265, 1145, 1238, 1598, 1619, 1663, 1829
FriOI GRGCYC 1 cut(s) 573
FspBI CTAG 5 cut(s) 245, 725, 1329, 1556, 1950
GsaI CCCAGC 1 cut(s) 438
GsuI CTGGAG 1 cut(s) 1211
HaeIII GGCC 7 cut(s) 593, 746, 773, 1322, 1454, 1793, 1844
HapII CCGG 5 cut(s) 301, 321, 566, 574, 1290
HgaI GACGC 3 cut(s) 395, 624, 668
Hin1I GRCGYC 2 cut(s) 396, 635
Hin1II CATG 5 cut(s) 43, 884, 1079, 1837, 2220
HincII GTYRAC 3 cut(s) 868, 1383, 1891
HindII GTYRAC 3 cut(s) 868, 1383, 1891
HindIII AAGCTT 2 cut(s) 1574, 1862
HpaII CCGG 5 cut(s) 301, 321, 566, 574, 1290
HphI GGTGA 4 cut(s) 397, 1097, 1222, 2030
Hpy166II GTNNAC 5 cut(s) 868, 1383, 1823, 1891, 2126
Hpy188I TCNGA 9 cut(s) 76, 172, 199, 267, 839, 1553, 1582, 1852, 2071
Hpy8I GTNNAC 5 cut(s) 868, 1383, 1823, 1891, 2126
Hpy99I CGWCG 3 cut(s) 185, 389, 413
HpyAV CCTTC 3 cut(s) 450, 649, 1213
HpyCH4III ACNGT 5 cut(s) 208, 1109, 1362, 1641, 1888
HpyCH4IV ACGT 1 cut(s) 396
HpySE526I ACGT 1 cut(s) 396
Hsp92I GRCGYC 2 cut(s) 396, 635
Hsp92II CATG 5 cut(s) 43, 884, 1079, 1837, 2220
Kpn2I TCCGGA 1 cut(s) 565
Kzo9I GATC 9 cut(s) 130, 262, 267, 367, 580, 597, 900, 1243, 2020
LmnI GCTCC 7 cut(s) 157, 568, 576, 936, 1420, 1433, 1602
LweI GCATC 7 cut(s) 337, 832, 940, 1293, 1393, 1685, 2204
MaeI CTAG 5 cut(s) 245, 725, 1329, 1556, 1950
MaeII ACGT 1 cut(s) 396
MaeIII GTNAC 4 cut(s) 335, 785, 1247, 1331
MalI GATC 9 cut(s) 132, 264, 269, 369, 582, 599, 902, 1245, 2022
MboI GATC 9 cut(s) 130, 262, 267, 367, 580, 597, 900, 1243, 2020
MfeI CAATTG 1 cut(s) 663
MflI RGATCY 2 cut(s) 130, 262
MhlI GDGCHC 4 cut(s) 573, 622, 1917, 2154
MlsI TGGCCA 1 cut(s) 1454
MluNI TGGCCA 1 cut(s) 1454
MlyI GAGTC 5 cut(s) 71, 556, 863, 1519, 2060
MmeI TCCRAC 9 cut(s) 99, 222, 558, 570, 958, 1279, 1344, 1624, 2160
Mox20I TGGCCA 1 cut(s) 1454
Mph1103I ATGCAT 1 cut(s) 882
MroI TCCGGA 1 cut(s) 565
MroXI GAANNNNTTC 2 cut(s) 191, 418
MscI TGGCCA 1 cut(s) 1454
MseI TTAA 3 cut(s) 326, 1103, 1878
Msp20I TGGCCA 1 cut(s) 1454
MspA1I CMGCKG 2 cut(s) 736, 800
MspI CCGG 5 cut(s) 301, 321, 566, 574, 1290
MspR9I CCNGG 4 cut(s) 301, 652, 1456, 1537
MunI CAATTG 1 cut(s) 663
Mva1269I GAATGC 1 cut(s) 1659
MvaI CCWGG 3 cut(s) 652, 1456, 1537
NciI CCSGG 1 cut(s) 301
NdeII GATC 9 cut(s) 130, 262, 267, 367, 580, 597, 900, 1243, 2020
NlaIII CATG 5 cut(s) 43, 884, 1079, 1837, 2220
NmeAIII GCCGAG 2 cut(s) 628, 1813
NmuCI GTSAC 2 cut(s) 785, 1247
NsiI ATGCAT 1 cut(s) 882
NspI RCATGY 1 cut(s) 1079
PceI AGGCCT 2 cut(s) 593, 746
PciI ACATGT 1 cut(s) 1075
PcsI WCGNNNNNNNCGW 2 cut(s) 393, 771
PctI GAATGC 1 cut(s) 1659
PdmI GAANNNNTTC 2 cut(s) 191, 418
PfeI GAWTC 9 cut(s) 23, 109, 330, 414, 419, 860, 1070, 1151, 1713
PfoI TCCNGGA 1 cut(s) 299
Ple19I CGATCG 1 cut(s) 370
PleI GAGTC 5 cut(s) 71, 556, 863, 1518, 2060
PpsI GAGTC 5 cut(s) 71, 556, 863, 1518, 2060
PscI ACATGT 1 cut(s) 1075
Psp124BI GAGCTC 1 cut(s) 573
Psp6I CCWGG 3 cut(s) 650, 1454, 1535
PspFI CCCAGC 1 cut(s) 434
PspGI CCWGG 3 cut(s) 650, 1454, 1535
PstI CTGCAG 2 cut(s) 1468, 1618
PstNI CAGNNNCTG 4 cut(s) 1639, 2054, 2069, 2198
PsuI RGATCY 2 cut(s) 130, 262
PvuI CGATCG 1 cut(s) 370
PvuII CAGCTG 1 cut(s) 736
RsaI GTAC 1 cut(s) 462
RsaNI GTAC 1 cut(s) 461
SacI GAGCTC 1 cut(s) 573
SalI GTCGAC 1 cut(s) 866
SaqAI TTAA 3 cut(s) 326, 1103, 1878
Sau3AI GATC 9 cut(s) 130, 262, 267, 367, 580, 597, 900, 1243, 2020
SchI GAGTC 5 cut(s) 71, 556, 863, 1519, 2060
ScrFI CCNGG 4 cut(s) 301, 652, 1456, 1537
SduI GDGCHC 4 cut(s) 573, 622, 1917, 2154
SfaNI GCATC 7 cut(s) 337, 832, 940, 1293, 1393, 1685, 2204
SfcI CTRYAG 2 cut(s) 1464, 1614
SmlI CTYRAG 2 cut(s) 1856, 1865
SmoI CTYRAG 2 cut(s) 1856, 1865
SseBI AGGCCT 2 cut(s) 593, 746
SsiI CCGC 7 cut(s) 155, 318, 632, 648, 683, 798, 906
SspMI CTAG 5 cut(s) 245, 725, 1329, 1556, 1950
SstI GAGCTC 1 cut(s) 573
StuI AGGCCT 2 cut(s) 593, 746
StyD4I CCNGG 4 cut(s) 299, 650, 1454, 1535
StyI CCWWGG 3 cut(s) 1038, 1926, 2076
TaaI ACNGT 5 cut(s) 208, 1109, 1362, 1641, 1888
TaiI ACGT 1 cut(s) 399
TaqI TCGA 9 cut(s) 51, 180, 293, 384, 417, 492, 765, 867, 1401
TaqII GACCGA 1 cut(s) 270
TauI GCSGC 5 cut(s) 320, 635, 686, 800, 908
TfiI GAWTC 9 cut(s) 23, 109, 330, 414, 419, 860, 1070, 1151, 1713
Tru1I TTAA 3 cut(s) 326, 1103, 1878
Tru9I TTAA 3 cut(s) 326, 1103, 1878
TscAI CASTG 3 cut(s) 211, 622, 1131
TseFI GTSAC 2 cut(s) 785, 1247
Tsp45I GTSAC 2 cut(s) 785, 1247
TspDTI ATGAA 2 cut(s) 1014, 1690
TspGWI ACGGA 1 cut(s) 426
TspRI CASTG 3 cut(s) 211, 622, 1131
XagI CCTNNNNNAGG 2 cut(s) 32, 649
XapI RAATTY 2 cut(s) 289, 1759
XbaI TCTAGA 1 cut(s) 724
XceI RCATGY 1 cut(s) 1079
XmiI GTMKAC 3 cut(s) 867, 1822, 2125
XmnI GAANNNNTTC 2 cut(s) 191, 418
XspI CTAG 5 cut(s) 245, 725, 1329, 1556, 1950
ZraI GACGTC 1 cut(s) 397
Zsp2I ATGCAT 1 cut(s) 882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.