Rorug07G0171000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0014602
Physical Location & Seq
Reverse (-)
13876192 .. 13890979
14788 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0171000.1

Sequence Viewer

Length: 1431 bp
ATGGCTGCCGAGCGTTCGGCCTCGGCCTGTGCACATGTCTCCATGAGGTCGCGCATCGCTATTTCTAGTGTTGTGGTTGGGTCAATGGTCATGACTGAGCGAGTCTCGGTGTTCGAGCTTTGGAACTCGAGAGTGCGCTGGACCTTGCGGGTCGCTGCCTCGTGGGGCGGATCGTCATTGTTCGTATCGGGAGTGTTGGTAGCCATTGGGGCTGTGTTGTTCTGCCAGCAAGGAGCGAGGGGAGTCCTTCTTGCGCCAAATGTTTCAGCTATTTCGGGAAGGCATATTTGTGGGAGCTTGGTTCCGTTTCTTTCGGTGTGGGACGCTCGGGGTTCCCGATATCGCCTCGAGGGGCATCGAGACCCTCGGTTGGGAGCTTTCCTTGCTTGTGTATTGGCGATACGAGTCTTGTGCTTCCGATATTTGTGCCTAGGAGGAAAAGCAAGGCCATTGGCCCATGGTGTAGCGTTCAGAGACGCATCTGGAACCAGACACACAGCATACCTCAAGAAAGGGTCCAAGAACGAGATAATTATATCAGCTGGGGCAATTGGAAGCCCACAGATCTTGTTGTTGAGTGGTGTGGGCCCTGAAGAGCACCTTAAGGCCCACAACATCACCGTTGTGTTGGACCAACCCATGGTTGGCCGAGGCATGTCAGACAACCCTATGAATGCCATTTTCGTGCCTTCACCTAACCCGGTCGAGGTGTCGCTCATCCAAGTCGTTGGCATTATCCGCTTCGGAAGCTACATTGAAGCTGCTGGAGGCGAAAACTTCTCTCCGAGGGACTATGGAATGTTATCTCCCAAGATTGGCCAGCTCTCCACCTTGCCACCAAAGCAAAGGACCCCTGAAGCCCTAGCTAAAGCTGTGGAATTCATGAACAGTCTTGATGAAGCAGCTTTTAACGGAGGCTTCATCCTTGAGAAGATCATAGGCCCCGTTTCCGCAGGCCATTTGGAGCTCCAGACCCTAAACCCGAACGACAACCCCTCTGTCACCTTCAACTATTTCCAAGACCCCCTAGACTTGGAGAGATGTGTCCGAGGCCTTCATACCATAGAGAAGGTGGTTGAATCAAAGGCATTCTCCAAATTCCGGTTCAACGATATGTCAATACCAACTCTCCTCAACATGACAGCCCGAGCCCCCATCAATTTGCTGCCTAGGCATGAGAATTCTTCAAGGTCTCTGGAGCAGTTCTGTAAGGTCACTGTGATGACCATTTGGCATTACCATGGAGGATGCCAAGTTGGGAGAGTTGTTGATCATCAATACAAGGTTCTTGGTGTTGATGCTCTTAGGGTTATTGATGGCTCCACTTTTAACTACTCACCTGGGACTAATCCTCAAGCCACTGTTATGATGCTTGGAAGGTACATGGGACAGACAATACTGAATGAGAGACTTGCGACTGATGAACCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UVR

Protein Analysis

476

Amino Acids

51.79

Weight (kDa)

9.21

Isoelectric Point (pI)

37.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GMC_oxred_N PF00732 138 - 223 3e-08 GMC oxidoreductase
GMC_oxred_C PF05199 315 - 459 3.9e-26 GMC oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014602)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G25070
fragaria_vesca FvH4_5g26850 FvH4_5g26850
malus_domestica MD04G1004600.v1.1
prunus_persica Prupe.1G004400_v2.0.a1
pyrus_communis pycom04g00470
rosa_chinensis RchiOBHm_Chr7g0217751
rosa_laevigata RLG00000002441
rosa_multiflora Rmu_sc0000202.1_g000023 Rmu_sc0006958.1_g000001
rosa_roxburghii Rroxscaffold_3G00241710
rosa_rugosa Rorug07G0171000
rosa_samantha Rh7AG311700 Rh7BG303600 Rh7CG330500 Rh7DG311400
rosa_wichuraiana Rw7G026450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 347
AccB7I CCANNNNNTGG 1 cut(s) 640
AccII CGCG 1 cut(s) 52
AciI CCGC 4 cut(s) 148, 168, 739, 951
AclWI GGATC 1 cut(s) 178
AcoI YGGCCR 2 cut(s) 646, 817
AcsI RAATTY 3 cut(s) 878, 1097, 1180
AcuI CTGAAG 2 cut(s) 612, 876
AfaI GTAC 1 cut(s) 1382
AfiI CCNNNNNNNGG 8 cut(s) 370, 371, 640, 644, 706, 815, 1033, 1101
AflII CTTAAG 1 cut(s) 602
AflIII ACRYGT 1 cut(s) 34
AgsI TTSAA 5 cut(s) 758, 1009, 1079, 1108, 1188
AjnI CCWGG 1 cut(s) 1339
AjuI GAANNNNNNNTTGG 2 cut(s) 1088, 1120
AleI CACNNNNGTG 1 cut(s) 623
Alw21I GWGCWC 3 cut(s) 34, 600, 969
Alw26I GTCTC 6 cut(s) 43, 109, 354, 468, 1197, 1402
Alw44I GTGCAC 1 cut(s) 30
AlwI GGATC 1 cut(s) 178
Ama87I CYCGRG 4 cut(s) 127, 327, 347, 1146
ApaI GGGCCC 1 cut(s) 590
ApaLI GTGCAC 1 cut(s) 30
ApeKI GCWGC 5 cut(s) 5, 155, 761, 902, 1165
ApoI RAATTY 3 cut(s) 878, 1097, 1180
AspA2I CCTAGG 2 cut(s) 430, 1169
AspLEI GCGC 3 cut(s) 54, 138, 256
AspS9I GGNCC 9 cut(s) 141, 454, 516, 586, 587, 607, 631, 849, 941
AsuC2I CCSGG 1 cut(s) 701
AsuHPI GGTGA 4 cut(s) 610, 684, 994, 1329
AvaI CYCGRG 4 cut(s) 127, 327, 347, 1146
AvaII GGWCC 4 cut(s) 141, 516, 631, 849
AvrII CCTAGG 2 cut(s) 430, 1169
BaeGI GKGCMC 2 cut(s) 34, 590
BalI TGGCCA 1 cut(s) 819
BanII GRGCYC 3 cut(s) 590, 969, 1153
BauI CACGAG 1 cut(s) 160
Bbv12I GWGCWC 3 cut(s) 34, 600, 969
BbvI GCAGC 4 cut(s) 142, 748, 914, 1152
BccI CCATC 2 cut(s) 1163, 1310
BcgI CGANNNNNNTGC 4 cut(s) 393, 408, 427, 442
BciT130I CCWGG 1 cut(s) 1341
BclI TGATCA 1 cut(s) 1270
BcnI CCSGG 1 cut(s) 701
BcoDI GTCTC 6 cut(s) 43, 109, 354, 468, 1197, 1402
BfaI CTAG 5 cut(s) 66, 431, 863, 1028, 1170
BfrI CTTAAG 1 cut(s) 602
BglI GCCNNNNNGGC 1 cut(s) 209
BglII AGATCT 1 cut(s) 564
BisI GCNGC 5 cut(s) 6, 156, 762, 903, 1166
BlnI CCTAGG 2 cut(s) 430, 1169
BlsI GCNGC 5 cut(s) 7, 157, 763, 904, 1167
Bme1390I CCNGG 2 cut(s) 701, 1341
Bme18I GGWCC 4 cut(s) 141, 516, 631, 849
BmeT110I CYCGRG 4 cut(s) 127, 327, 347, 1146
BmgT120I GGNCC 9 cut(s) 141, 454, 516, 586, 587, 607, 631, 849, 941
BmiI GGNNCC 8 cut(s) 303, 334, 487, 517, 588, 851, 943, 1321
BmrFI CCNGG 2 cut(s) 701, 1341
BmsI GCATC 6 cut(s) 63, 364, 488, 1238, 1288, 1359
BplI GAGNNNNNCTC 2 cut(s) 89, 121
BpmI CTGGAG 3 cut(s) 786, 953, 1217
BpuEI CTTGAG 3 cut(s) 491, 947, 1338
BpuMI CCSGG 1 cut(s) 701
BsaI GGTCTC 2 cut(s) 354, 1197
BsaWI WCCGGW 1 cut(s) 1101
BsaXI ACNNNNNCTCC 4 cut(s) 183, 213, 1113, 1143
Bsc4I CCNNNNNNNGG 8 cut(s) 370, 371, 640, 644, 706, 815, 1033, 1101
BseBI CCWGG 1 cut(s) 1341
BseGI GGATG 3 cut(s) 717, 921, 1253
BseLI CCNNNNNNNGG 8 cut(s) 370, 371, 640, 644, 706, 815, 1033, 1101
BseMII CTCAG 1 cut(s) 87
BseRI GAGGAG 1 cut(s) 1121
BseSI GKGCMC 2 cut(s) 34, 590
BseXI GCAGC 4 cut(s) 142, 748, 914, 1152
BseYI CCCAGC 1 cut(s) 542
Bsh1236I CGCG 1 cut(s) 52
Bsh1285I CGRYCG 1 cut(s) 705
BsiEI CGRYCG 1 cut(s) 705
BsiHKAI GWGCWC 3 cut(s) 34, 600, 969
BsiHKCI CYCGRG 4 cut(s) 127, 327, 347, 1146
BsiSI CCGG 2 cut(s) 701, 1102
BslFI GGGAC 4 cut(s) 335, 803, 1357, 1401
BslI CCNNNNNNNGG 8 cut(s) 370, 371, 640, 644, 706, 815, 1033, 1101
BsmAI GTCTC 6 cut(s) 43, 109, 354, 468, 1197, 1402
BsmBI CGTCTC 1 cut(s) 468
BsmFI GGGAC 4 cut(s) 335, 803, 1357, 1401
BsmI GAATGC 2 cut(s) 679, 1088
Bso31I GGTCTC 2 cut(s) 354, 1197
BsoBI CYCGRG 4 cut(s) 127, 327, 347, 1146
Bsp120I GGGCCC 1 cut(s) 586
Bsp1286I GDGCHC 5 cut(s) 34, 590, 600, 969, 1153
Bsp143I GATC 4 cut(s) 170, 564, 933, 1270
Bsp19I CCATGG 3 cut(s) 457, 639, 1240
BspACI CCGC 4 cut(s) 148, 168, 739, 951
BspCNI CTCAG 1 cut(s) 88
BspFNI CGCG 1 cut(s) 52
BspHI TCATGA 2 cut(s) 90, 882
BspLI GGNNCC 8 cut(s) 303, 334, 487, 517, 588, 851, 943, 1321
BspPI GGATC 1 cut(s) 178
BspQI GCTCTTC 1 cut(s) 588
BspTI CTTAAG 1 cut(s) 602
BspTNI GGTCTC 2 cut(s) 354, 1197
BssMI GATC 4 cut(s) 170, 564, 933, 1270
BssSI CACGAG 1 cut(s) 160
BssT1I CCWWGG 5 cut(s) 430, 457, 639, 1169, 1240
Bst2BI CACGAG 1 cut(s) 160
Bst2UI CCWGG 1 cut(s) 1341
Bst4CI ACNGT 4 cut(s) 622, 890, 1219, 1363
Bst6I CTCTTC 1 cut(s) 588
BstAFI CTTAAG 1 cut(s) 602
BstC8I GCNNGC 3 cut(s) 227, 821, 955
BstDEI CTNAG 2 cut(s) 96, 1304
BstDSI CCRYGG 3 cut(s) 457, 639, 1240
BstF5I GGATG 3 cut(s) 717, 921, 1253
BstFNI CGCG 1 cut(s) 52
BstHHI GCGC 3 cut(s) 54, 138, 256
BstKTI GATC 4 cut(s) 173, 567, 936, 1273
BstMAI GTCTC 6 cut(s) 43, 109, 354, 468, 1197, 1402
BstMBI GATC 4 cut(s) 170, 564, 933, 1270
BstMCI CGRYCG 1 cut(s) 705
BstMWI GCNNNNNNNGC 6 cut(s) 209, 383, 738, 747, 841, 1171
BstNI CCWGG 1 cut(s) 1341
BstNSI RCATGY 2 cut(s) 38, 658
BstSCI CCNGG 2 cut(s) 699, 1339
BstSLI GKGCMC 2 cut(s) 34, 590
BstUI CGCG 1 cut(s) 52
BstV1I GCAGC 4 cut(s) 142, 748, 914, 1152
BstX2I RGATCY 1 cut(s) 564
BstXI CCANNNNNNTGG 1 cut(s) 728
BstYI RGATCY 1 cut(s) 564
BtgI CCRYGG 3 cut(s) 457, 639, 1240
BtgZI GCGATG 1 cut(s) 40
BtsCI GGATG 3 cut(s) 717, 921, 1253
BtsIMutI CAGTG 2 cut(s) 1215, 1359
Cac8I GCNNGC 3 cut(s) 227, 821, 955
CciI TCATGA 2 cut(s) 90, 882
CfoI GCGC 3 cut(s) 54, 138, 256
Cfr13I GGNCC 9 cut(s) 141, 454, 516, 586, 587, 607, 631, 849, 941
CseI GACGC 2 cut(s) 332, 485
Csp6I GTAC 1 cut(s) 1381
CspCI CAANNNNNGTGG 2 cut(s) 549, 584
CviQI GTAC 1 cut(s) 1381
DdeI CTNAG 2 cut(s) 96, 1304
DpnI GATC 4 cut(s) 172, 566, 935, 1272
DpnII GATC 4 cut(s) 170, 564, 933, 1270
EaeI YGGCCR 2 cut(s) 646, 817
Eam1104I CTCTTC 1 cut(s) 588
EarI CTCTTC 1 cut(s) 588
EciI GGCGGA 1 cut(s) 183
Ecl136II GAGCTC 1 cut(s) 967
Eco130I CCWWGG 5 cut(s) 430, 457, 639, 1169, 1240
Eco147I AGGCCT 1 cut(s) 1053
Eco24I GRGCYC 3 cut(s) 590, 969, 1153
Eco31I GGTCTC 2 cut(s) 354, 1197
Eco32I GATATC 1 cut(s) 341
Eco47I GGWCC 4 cut(s) 141, 516, 631, 849
Eco53kI GAGCTC 1 cut(s) 967
Eco57I CTGAAG 2 cut(s) 612, 876
Eco88I CYCGRG 4 cut(s) 127, 327, 347, 1146
EcoICRI GAGCTC 1 cut(s) 967
EcoO109I RGGNCCY 3 cut(s) 587, 849, 941
EcoRI GAATTC 2 cut(s) 878, 1180
EcoRII CCWGG 1 cut(s) 1339
EcoRV GATATC 1 cut(s) 341
EcoT14I CCWWGG 5 cut(s) 430, 457, 639, 1169, 1240
EcoT38I GRGCYC 3 cut(s) 590, 969, 1153
ErhI CCWWGG 5 cut(s) 430, 457, 639, 1169, 1240
Esp3I CGTCTC 1 cut(s) 468
FalI AAGNNNNNCTT 2 cut(s) 585, 617
FaqI GGGAC 4 cut(s) 335, 803, 1357, 1401
FauI CCCGC 1 cut(s) 141
FbaI TGATCA 1 cut(s) 1270
Fnu4HI GCNGC 5 cut(s) 6, 156, 762, 903, 1166
FokI GGATG 3 cut(s) 704, 908, 1260
FriOI GRGCYC 3 cut(s) 590, 969, 1153
Fsp4HI GCNGC 5 cut(s) 6, 156, 762, 903, 1166
FspBI CTAG 5 cut(s) 66, 431, 863, 1028, 1170
GlaI GCGC 3 cut(s) 53, 137, 255
GluI GCNGC 5 cut(s) 6, 156, 762, 903, 1166
GsaI CCCAGC 1 cut(s) 546
GsuI CTGGAG 3 cut(s) 786, 953, 1217
HapII CCGG 2 cut(s) 701, 1102
HgaI GACGC 2 cut(s) 332, 485
HhaI GCGC 3 cut(s) 54, 138, 256
Hin6I GCGC 3 cut(s) 52, 136, 254
HinP1I GCGC 3 cut(s) 52, 136, 254
HinfI GANTC 4 cut(s) 102, 243, 405, 1079
HpaII CCGG 2 cut(s) 701, 1102
HphI GGTGA 4 cut(s) 610, 684, 994, 1329
Hpy166II GTNNAC 1 cut(s) 32
Hpy188I TCNGA 6 cut(s) 419, 473, 661, 746, 786, 1049
Hpy8I GTNNAC 1 cut(s) 32
HpyAV CCTTC 7 cut(s) 257, 273, 699, 1015, 1063, 1064, 1371
HpyCH4III ACNGT 4 cut(s) 622, 890, 1219, 1363
HpyCH4V TGCA 1 cut(s) 32
HpyF10VI GCNNNNNNNGC 6 cut(s) 209, 383, 738, 747, 841, 1171
HpyF3I CTNAG 2 cut(s) 96, 1304
HspAI GCGC 3 cut(s) 52, 136, 254
Ksp22I TGATCA 1 cut(s) 1270
Kzo9I GATC 4 cut(s) 170, 564, 933, 1270
LguI GCTCTTC 1 cut(s) 588
LmnI GCTCC 7 cut(s) 233, 294, 374, 964, 972, 1198, 1325
Lsp1109I GCAGC 4 cut(s) 142, 748, 914, 1152
LweI GCATC 6 cut(s) 63, 364, 488, 1238, 1288, 1359
MaeI CTAG 5 cut(s) 66, 431, 863, 1028, 1170
MaeIII GTNAC 2 cut(s) 1000, 1213
MalI GATC 4 cut(s) 172, 566, 935, 1272
MboI GATC 4 cut(s) 170, 564, 933, 1270
MboII GAAGA 3 cut(s) 605, 943, 1176
MfeI CAATTG 1 cut(s) 549
MflI RGATCY 1 cut(s) 564
MhlI GDGCHC 5 cut(s) 34, 590, 600, 969, 1153
MlsI TGGCCA 1 cut(s) 819
MluCI AATT 6 cut(s) 531, 549, 878, 1097, 1159, 1180
MluNI TGGCCA 1 cut(s) 819
MlyI GAGTC 3 cut(s) 111, 252, 414
MmeI TCCRAC 1 cut(s) 609
Mox20I TGGCCA 1 cut(s) 819
MscI TGGCCA 1 cut(s) 819
MseI TTAA 3 cut(s) 603, 909, 1329
MslI CAYNNNNRTG 6 cut(s) 288, 623, 683, 1220, 1239, 1364
Msp20I TGGCCA 1 cut(s) 819
MspA1I CMGCKG 1 cut(s) 542
MspCI CTTAAG 1 cut(s) 602
MspI CCGG 2 cut(s) 701, 1102
MspR9I CCNGG 2 cut(s) 701, 1341
MunI CAATTG 1 cut(s) 549
Mva1269I GAATGC 2 cut(s) 679, 1088
MvaI CCWGG 1 cut(s) 1341
MvnI CGCG 1 cut(s) 52
MwoI GCNNNNNNNGC 6 cut(s) 209, 383, 738, 747, 841, 1171
NciI CCSGG 1 cut(s) 701
NcoI CCATGG 3 cut(s) 457, 639, 1240
NdeII GATC 4 cut(s) 170, 564, 933, 1270
NlaIV GGNNCC 8 cut(s) 303, 334, 487, 517, 588, 851, 943, 1321
NmeAIII GCCGAG 2 cut(s) 34, 674
NmuCI GTSAC 2 cut(s) 1000, 1213
NspI RCATGY 2 cut(s) 38, 658
OliI CACNNNNGTG 1 cut(s) 623
PaeR7I CTCGAG 2 cut(s) 127, 347
PagI TCATGA 2 cut(s) 90, 882
PceI AGGCCT 1 cut(s) 1053
PciI ACATGT 1 cut(s) 34
PciSI GCTCTTC 1 cut(s) 588
PcsI WCGNNNNNNNCGW 1 cut(s) 334
PctI GAATGC 2 cut(s) 679, 1088
PfeI GAWTC 1 cut(s) 1079
PflMI CCANNNNNTGG 1 cut(s) 640
PkrI GCNGC 5 cut(s) 7, 157, 763, 904, 1167
PleI GAGTC 3 cut(s) 110, 251, 413
PpsI GAGTC 3 cut(s) 110, 251, 413
PpuMI RGGWCCY 1 cut(s) 849
PscI ACATGT 1 cut(s) 34
Psp124BI GAGCTC 1 cut(s) 969
Psp5II RGGWCCY 1 cut(s) 849
Psp6I CCWGG 1 cut(s) 1339
PspFI CCCAGC 1 cut(s) 542
PspGI CCWGG 1 cut(s) 1339
PspN4I GGNNCC 8 cut(s) 303, 334, 487, 517, 588, 851, 943, 1321
PspOMI GGGCCC 1 cut(s) 586
PspPI GGNCC 9 cut(s) 141, 454, 516, 586, 587, 607, 631, 849, 941
PspPPI RGGWCCY 1 cut(s) 849
PspXI VCTCGAGB 1 cut(s) 347
PsuI RGATCY 1 cut(s) 564
PvuII CAGCTG 1 cut(s) 542
RsaI GTAC 1 cut(s) 1382
RsaNI GTAC 1 cut(s) 1381
RseI CAYNNNNRTG 6 cut(s) 288, 623, 683, 1220, 1239, 1364
SacI GAGCTC 1 cut(s) 969
SapI GCTCTTC 1 cut(s) 588
SaqAI TTAA 3 cut(s) 603, 909, 1329
SatI GCNGC 5 cut(s) 6, 156, 762, 903, 1166
Sau3AI GATC 4 cut(s) 170, 564, 933, 1270
Sau96I GGNCC 9 cut(s) 141, 454, 516, 586, 587, 607, 631, 849, 941
SchI GAGTC 3 cut(s) 111, 252, 414
ScrFI CCNGG 2 cut(s) 701, 1341
SduI GDGCHC 5 cut(s) 34, 590, 600, 969, 1153
SfaNI GCATC 6 cut(s) 63, 364, 488, 1238, 1288, 1359
Sfr274I CTCGAG 2 cut(s) 127, 347
SinI GGWCC 4 cut(s) 141, 516, 631, 849
SlaI CTCGAG 2 cut(s) 127, 347
SmiMI CAYNNNNRTG 6 cut(s) 288, 623, 683, 1220, 1239, 1364
SmlI CTYRAG 6 cut(s) 127, 347, 506, 602, 926, 1353
SmoI CTYRAG 6 cut(s) 127, 347, 506, 602, 926, 1353
Sse9I AATT 6 cut(s) 531, 549, 878, 1097, 1159, 1180
SseBI AGGCCT 1 cut(s) 1053
SsiI CCGC 4 cut(s) 148, 168, 739, 951
SspMI CTAG 5 cut(s) 66, 431, 863, 1028, 1170
SstI GAGCTC 1 cut(s) 969
StuI AGGCCT 1 cut(s) 1053
StyD4I CCNGG 2 cut(s) 699, 1339
StyI CCWWGG 5 cut(s) 430, 457, 639, 1169, 1240
TaaI ACNGT 4 cut(s) 622, 890, 1219, 1363
TaqI TCGA 5 cut(s) 114, 128, 348, 358, 705
TasI AATT 6 cut(s) 531, 549, 878, 1097, 1159, 1180
TfiI GAWTC 1 cut(s) 1079
Tru1I TTAA 3 cut(s) 603, 909, 1329
Tru9I TTAA 3 cut(s) 603, 909, 1329
TscAI CASTG 2 cut(s) 1222, 1366
TseFI GTSAC 2 cut(s) 1000, 1213
TseI GCWGC 5 cut(s) 5, 155, 761, 902, 1165
Tsp45I GTSAC 2 cut(s) 1000, 1213
TspDTI ATGAA 6 cut(s) 686, 871, 899, 910, 912, 1046
TspGWI ACGGA 2 cut(s) 294, 927
TspRI CASTG 2 cut(s) 1222, 1366
Van91I CCANNNNNTGG 1 cut(s) 640
Vha464I CTTAAG 1 cut(s) 602
VneI GTGCAC 1 cut(s) 30
VpaK11BI GGWCC 4 cut(s) 141, 516, 631, 849
XapI RAATTY 3 cut(s) 878, 1097, 1180
XceI RCATGY 2 cut(s) 38, 658
XcmI CCANNNNNNNNNTGG 2 cut(s) 641, 1069
XhoI CTCGAG 2 cut(s) 127, 347
XmaJI CCTAGG 2 cut(s) 430, 1169
XspI CTAG 5 cut(s) 66, 431, 863, 1028, 1170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.