Rroxscaffold_3G00241710

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0014602
Physical Location & Seq
Forward (+)
33921247 .. 33924241
2995 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00241710.1

Sequence Viewer

Length: 2199 bp
ATGGAGGAAGAAGAGGAAATGGATTCCCTGTTCGAGGGCATGGTGTTGTTCGACCCCAGTTCCAGTTCCAGTTCCGACTCACACCATCCTCCTCCTCCTCCTCCTCCTCAGCAGAATCAGGACAACGCCCAAGATCCCAAACTTGAAATTGAAGCTCCGCCATCATCATCATCATCTGAACCCCTCGACGAGAACCTCTTCTCCGACCTCACTGTCCAATTCCAATCCCCACCACCACCACTAGACCAAGACCAAGAAGGTCCGATCAAAACCACATCGAGACAGAATTCGAGTTCCCGGAAGAAAAAAAGAGCCGCCGGATTAAGAATCGGTTACGCCAGAGATGCCAACGCTCACTCTCACGATCGCTCTCTCTCTTTCGACGCCGATGACGTCATCATCGCCGACGGAATCGATTCGCTTCCCGAACCCAGCCCTTCTTCTGTATCAGTATCAGTACCAGTCCAATCCCAACCCGAACCCGAAGTCGAAAACGAACCCGAACCCGAAGTTGAACCCAAAGCTGAAGCAGAACCCCAATCCGACGAAGCTGAAGCGACTCCGGAGCTCCGGTTGGATCAAAGCAAGGCCTTGATCGCGGAGAAGCTGAGCAGTGCTCGTCGGTTGGCGGCGTCTGTTTCCTCCGCCAGGAAGGACGCAATTGCAAGGAGGAGGTCGGCGGCTGACAATCTCAATCTGGCTTCTGGCGATCACGCCAGTCTAGAGAAGCAGCTGGAAGAGGCCTGCGAGGCAGAGGATTTCGAGACGGCCGAAAGGCTTAGTGACAGCCTTGCTGCTGCTCAGGAGAAGAGGCAAGCTCTGTTGGCCGCACTCAGAGATGCTGAGGCTGAATGTGATGCTGTCGACTCCAAAATGCATGAGGTTCTCCAATCCCAGATCGCCGCAGAGGAACATTGCGCTTCTCTGCTCCAACACTTCGCAACTGATGCTTCAAGTAATGCAGATTTGGTCTTAAAGGCAGCAGAGGAACTCTCTTCCACAGAAACAGACAAATGGCTTTCATCAACTGAAGCCTTGGAAGCCAAGAAGATGGAATTGGAAATTGAATCACATGTAATTGGTGAAGCAGGGCTTGTCTTGAACAGTTCCATTGAGACTTCAGTGGAGGATGACAAGAAAGAGAAAGAATCTCTGTGTAAGAAAAAGGAAACTCTTATGGACGAACTGGAGAAACTTCTTGCATTGGTGAGAGAGAAGGAACAGGAGATTGCACAAAATGATCGTGACATCCAACAAGTTGAGGAAAAGATTGCTAATGTTCTCTCTGGCTTTGGGGAGATGCAATCCACTATTCAGGCCAAGTCTAGTAACTTGCAAGAAGCCCTTTCCCAGATACAGTTGGAGAGTGAAGCTCTGTCAACAAAAAAGACAGAAATCGATGCTGTCCTTACTCAGGAGCAAGAGAGGGGAGCAAAGTTGAGGGAACTGGCCAGGGTTTCTGCAGAGGAAGCAGAGGCATACCAACAAGTTGCTGCTCTTAGAAAGAGTCTAATGTCCTCTATTTTGAAGTCCAGGGAAGATAAGGTCAGACTAGCAAAGACTGAGGAAAAGCTTTCCGAGGATGTTCAAAAGCTCCAACAGGATGTTTCTGCAGCAAGAACTTCACTTCAGTCAAGCATTCAGCAAGATATAGCATCCTCTAAGCAGAAAATTATTTTCATAGATAAAAGAATCCCAGAGCTGGAAGCAGAAAAGAAAGTTGCTGCTACTGCAAGAAATTTCAAAGAAGCTGCACGAATAGCTGCCGAGGCCAAGTCATTGAATGTTGAAAAGGATGGTATACAGATTGACATGGGAAAGGCCATCTCAGAGCTTGAGAAGCTTGAGGAAGAGATTAAGGAGACTGTCAACAGATTGCAGGAGACTGAAGGGCACATTTTGTCCAAGGAAAAGGAGGTAGCAACGGCTAGGTTTCAAAGGTTGCTACTGGTATCTGGTATCGCTAAAGCAGAAAGAGAAGCTGCTTTGGAGTTGGGTGATCTTGAAGAAGCTAACCTGCTGCTTGCAGAGGCTGAAGCAGCAGACTCTGAAGCCAAGGAACTTGAACCTATATACAACTTCAAATTGGAAGAGACTGAAAGTCTACCAAAGCACTTTATGTCTATGGTGCTCATATCCAATCTTGGGAGGAAGCAGTTGGAAGAATTGGCAGCATCTGTTCAAGTTTCTTCAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UVR

Protein Analysis

732

Amino Acids

80.36

Weight (kDa)

4.61

Isoelectric Point (pI)

64.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014602)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G25070
fragaria_vesca FvH4_5g26850 FvH4_5g26850
malus_domestica MD04G1004600.v1.1
prunus_persica Prupe.1G004400_v2.0.a1
pyrus_communis pycom04g00470
rosa_chinensis RchiOBHm_Chr7g0217751
rosa_laevigata RLG00000002441
rosa_multiflora Rmu_sc0000202.1_g000023 Rmu_sc0006958.1_g000001
rosa_roxburghii Rroxscaffold_3G00241710
rosa_rugosa Rorug07G0171000
rosa_samantha Rh7AG311700 Rh7BG303600 Rh7CG330500 Rh7DG311400
rosa_wichuraiana Rw7G026450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 212
AatII GACGTC 1 cut(s) 396
Acc36I ACCTGC 1 cut(s) 2025
AccI GTMKAC 3 cut(s) 864, 1801, 2104
AccII CGCG 1 cut(s) 599
AccIII TCCGGA 1 cut(s) 562
AciI CCGC 8 cut(s) 158, 315, 599, 629, 645, 680, 828, 903
AclWI GGATC 2 cut(s) 128, 585
AcoI YGGCCR 3 cut(s) 768, 825, 1449
AcsI RAATTY 2 cut(s) 286, 1738
AcuI CTGAAG 9 cut(s) 546, 573, 1050, 1104, 1613, 1908, 2055, 2070, 2175
AcyI GRCGYC 3 cut(s) 384, 393, 632
AfaI GTAC 1 cut(s) 459
AfiI CCNNNNNNNGG 5 cut(s) 34, 648, 1414, 1702, 2145
AflIII ACRYGT 1 cut(s) 1072
AhdI GACNNNNNGTC 1 cut(s) 2100
AjnI CCWGG 3 cut(s) 647, 1451, 1532
AjuI GAANNNNNNNTTGG 2 cut(s) 1040, 1072
AloI GAACNNNNNNTCC 4 cut(s) 14, 46, 185, 217
Alw21I GWGCWC 3 cut(s) 570, 619, 2133
Alw26I GTCTC 6 cut(s) 274, 758, 1109, 1856, 1877, 2087
AlwI GGATC 2 cut(s) 128, 585
AlwNI CAGNNNCTG 3 cut(s) 2033, 2048, 2177
Aor13HI TCCGGA 1 cut(s) 562
AoxI GGCC 8 cut(s) 588, 741, 768, 825, 1317, 1449, 1770, 1821
ApoI RAATTY 2 cut(s) 286, 1738
ArsI GACNNNNNNTTYG 2 cut(s) 471, 503
Asp700I GAANNNNTTC 2 cut(s) 197, 415
AspLEI GCGC 1 cut(s) 920
AspS9I GGNCC 1 cut(s) 260
AsuC2I CCSGG 1 cut(s) 298
AsuHPI GGTGA 3 cut(s) 1094, 1219, 2009
AvaII GGWCC 1 cut(s) 260
BaeGI GKGCMC 1 cut(s) 1896
BalI TGGCCA 1 cut(s) 1451
BanII GRGCYC 1 cut(s) 570
Bbv12I GWGCWC 3 cut(s) 570, 619, 2133
BbvCI CCTCAGC 2 cut(s) 108, 843
BccI CCATC 5 cut(s) 93, 169, 1045, 1790, 1832
BceAI ACGGC 2 cut(s) 783, 1941
BciT130I CCWGG 3 cut(s) 649, 1453, 1534
BcnI CCSGG 1 cut(s) 298
BcoDI GTCTC 6 cut(s) 274, 758, 1109, 1856, 1877, 2087
BfaI CTAG 5 cut(s) 242, 722, 1326, 1553, 1929
BfmI CTRYAG 2 cut(s) 1461, 1611
BfuAI ACCTGC 1 cut(s) 2025
BglI GCCNNNNNGGC 1 cut(s) 749
BlpI GCTNAGC 1 cut(s) 608
Bme1390I CCNGG 4 cut(s) 298, 649, 1453, 1534
Bme18I GGWCC 1 cut(s) 260
BmeRI GACNNNNNGTC 1 cut(s) 2100
BmgT120I GGNCC 1 cut(s) 260
BmrFI CCNGG 4 cut(s) 298, 649, 1453, 1534
BmrI ACTGGG 1 cut(s) 51
BmsI GCATC 8 cut(s) 334, 829, 847, 937, 1290, 1390, 1664, 2183
BmuI ACTGGG 1 cut(s) 51
BplI GAGNNNNNCTC 8 cut(s) 601, 633, 802, 834, 977, 1009, 1357, 1389
BpmI CTGGAG 1 cut(s) 1208
Bpu10I CCTNAGC 3 cut(s) 108, 801, 843
Bpu1102I GCTNAGC 1 cut(s) 608
BpuEI CTTGAG 2 cut(s) 1856, 1865
BpuMI CCSGG 1 cut(s) 298
Bsa29I ATCGAT 2 cut(s) 414, 1398
BsaHI GRCGYC 3 cut(s) 384, 393, 632
BsaJI CCNNGG 7 cut(s) 1035, 1452, 1533, 1578, 1767, 1905, 2055
BsaWI WCCGGW 2 cut(s) 562, 570
BsaXI ACNNNNNCTCC 4 cut(s) 185, 215, 557, 587
Bsc4I CCNNNNNNNGG 5 cut(s) 34, 648, 1414, 1702, 2145
Bse1I ACTGG 8 cut(s) 57, 63, 69, 461, 717, 1191, 1452, 1953
Bse3DI GCAATG 1 cut(s) 913
BseAI TCCGGA 1 cut(s) 562
BseBI CCWGG 3 cut(s) 649, 1453, 1534
BseCI ATCGAT 2 cut(s) 414, 1398
BseDI CCNNGG 7 cut(s) 1035, 1452, 1533, 1578, 1767, 1905, 2055
BseGI GGATG 7 cut(s) 85, 1135, 1248, 1588, 1609, 1655, 1801
BseLI CCNNNNNNNGG 5 cut(s) 34, 648, 1414, 1702, 2145
BseMI GCAATG 1 cut(s) 913
BseMII CTCAG 8 cut(s) 122, 599, 815, 834, 847, 1427, 1554, 1842
BseNI ACTGG 8 cut(s) 57, 63, 69, 461, 717, 1191, 1452, 1953
BseRI GAGGAG 7 cut(s) 81, 84, 87, 90, 93, 96, 685
BseSI GKGCMC 1 cut(s) 1896
BseX3I CGGCCG 1 cut(s) 768
BseYI CCCAGC 1 cut(s) 431
BsgI GTGCAG 1 cut(s) 1737
Bsh1236I CGCG 1 cut(s) 599
Bsh1285I CGRYCG 2 cut(s) 367, 771
BshFI GGCC 8 cut(s) 590, 743, 770, 827, 1319, 1451, 1772, 1823
BshVI ATCGAT 2 cut(s) 414, 1398
BsiEI CGRYCG 2 cut(s) 367, 771
BsiHKAI GWGCWC 3 cut(s) 570, 619, 2133
BsiSI CCGG 4 cut(s) 298, 318, 563, 571
BslI CCNNNNNNNGG 5 cut(s) 34, 648, 1414, 1702, 2145
BsmAI GTCTC 6 cut(s) 274, 758, 1109, 1856, 1877, 2087
BsmBI CGTCTC 1 cut(s) 758
BsmI GAATGC 1 cut(s) 1638
BsnI GGCC 8 cut(s) 590, 743, 770, 827, 1319, 1451, 1772, 1823
Bsp1286I GDGCHC 4 cut(s) 570, 619, 1896, 2133
Bsp13I TCCGGA 1 cut(s) 562
Bsp143I GATC 9 cut(s) 133, 264, 364, 577, 594, 709, 897, 1240, 1999
Bsp1720I GCTNAGC 1 cut(s) 608
BspACI CCGC 8 cut(s) 158, 315, 599, 629, 645, 680, 828, 903
BspANI GGCC 8 cut(s) 590, 743, 770, 827, 1319, 1451, 1772, 1823
BspCNI CTCAG 8 cut(s) 121, 600, 814, 835, 846, 1426, 1555, 1841
BspDI ATCGAT 2 cut(s) 414, 1398
BspEI TCCGGA 1 cut(s) 562
BspFNI CGCG 1 cut(s) 599
BspMAI CTGCAG 2 cut(s) 1465, 1615
BspMI ACCTGC 1 cut(s) 2025
BspPI GGATC 2 cut(s) 128, 585
BsrDI GCAATG 1 cut(s) 913
BsrI ACTGG 8 cut(s) 57, 63, 69, 461, 717, 1191, 1452, 1953
BssECI CCNNGG 7 cut(s) 1035, 1452, 1533, 1578, 1767, 1905, 2055
BssMI GATC 9 cut(s) 133, 264, 364, 577, 594, 709, 897, 1240, 1999
BssNAI GTATAC 1 cut(s) 1802
BssNI GRCGYC 3 cut(s) 384, 393, 632
BssT1I CCWWGG 3 cut(s) 1035, 1905, 2055
Bst1107I GTATAC 1 cut(s) 1802
Bst2UI CCWGG 3 cut(s) 649, 1453, 1534
Bst4CI ACNGT 4 cut(s) 214, 1106, 1359, 1867
Bst6I CTCTTC 7 cut(s) 6, 203, 732, 803, 1000, 1845, 2085
BstACI GRCGYC 3 cut(s) 384, 393, 632
BstAPI GCANNNNNTGC 1 cut(s) 947
BstC8I GCNNGC 3 cut(s) 745, 816, 2025
BstENI CCTNNNNNAGG 3 cut(s) 32, 646, 1412
BstF5I GGATG 7 cut(s) 85, 1135, 1248, 1588, 1609, 1655, 1801
BstFNI CGCG 1 cut(s) 599
BstHHI GCGC 1 cut(s) 920
BstKTI GATC 9 cut(s) 136, 267, 367, 580, 597, 712, 900, 1243, 2002
BstMAI GTCTC 6 cut(s) 274, 758, 1109, 1856, 1877, 2087
BstMBI GATC 9 cut(s) 133, 264, 364, 577, 594, 709, 897, 1240, 1999
BstMCI CGRYCG 2 cut(s) 367, 771
BstNI CCWGG 3 cut(s) 649, 1453, 1534
BstNSI RCATGY 1 cut(s) 1076
BstSCI CCNGG 4 cut(s) 296, 647, 1451, 1532
BstSFI CTRYAG 2 cut(s) 1461, 1611
BstSLI GKGCMC 1 cut(s) 1896
BstUI CGCG 1 cut(s) 599
BstX2I RGATCY 1 cut(s) 133
BstXI CCANNNNNNTGG 1 cut(s) 1051
BstYI RGATCY 1 cut(s) 133
BstZ17I GTATAC 1 cut(s) 1802
BstZI CGGCCG 1 cut(s) 768
Bsu15I ATCGAT 2 cut(s) 414, 1398
BsuRI GGCC 8 cut(s) 590, 743, 770, 827, 1319, 1451, 1772, 1823
BsuTUI ATCGAT 2 cut(s) 414, 1398
BtgZI GCGATG 1 cut(s) 385
BtsCI GGATG 7 cut(s) 85, 1135, 1248, 1588, 1609, 1655, 1801
BtsI GCAGTG 1 cut(s) 619
BtsIMutI CAGTG 3 cut(s) 210, 619, 1128
BveI ACCTGC 1 cut(s) 2025
Cac8I GCNNGC 3 cut(s) 745, 816, 2025
CaiI CAGNNNCTG 3 cut(s) 2033, 2048, 2177
CfoI GCGC 1 cut(s) 920
Cfr13I GGNCC 1 cut(s) 260
ClaI ATCGAT 2 cut(s) 414, 1398
CseI GACGC 3 cut(s) 392, 621, 665
Csp6I GTAC 1 cut(s) 458
CviAII CATG 5 cut(s) 40, 878, 1073, 1813, 2196
CviQI GTAC 1 cut(s) 458
DpnI GATC 9 cut(s) 135, 266, 366, 579, 596, 711, 899, 1242, 2001
DpnII GATC 9 cut(s) 133, 264, 364, 577, 594, 709, 897, 1240, 1999
DrdI GACNNNNNNGTC 1 cut(s) 212
DriI GACNNNNNGTC 1 cut(s) 2100
DseDI GACNNNNNNGTC 1 cut(s) 212
EaeI YGGCCR 3 cut(s) 768, 825, 1449
EagI CGGCCG 1 cut(s) 768
Eam1104I CTCTTC 7 cut(s) 6, 203, 732, 803, 1000, 1845, 2085
Eam1105I GACNNNNNGTC 1 cut(s) 2100
EarI CTCTTC 7 cut(s) 6, 203, 732, 803, 1000, 1845, 2085
EciI GGCGGA 2 cut(s) 147, 634
Ecl136II GAGCTC 1 cut(s) 568
EclXI CGGCCG 1 cut(s) 768
Eco130I CCWWGG 3 cut(s) 1035, 1905, 2055
Eco147I AGGCCT 2 cut(s) 590, 743
Eco24I GRGCYC 1 cut(s) 570
Eco47I GGWCC 1 cut(s) 260
Eco52I CGGCCG 1 cut(s) 768
Eco53kI GAGCTC 1 cut(s) 568
Eco57I CTGAAG 9 cut(s) 546, 573, 1050, 1104, 1613, 1908, 2055, 2070, 2175
EcoICRI GAGCTC 1 cut(s) 568
EcoNI CCTNNNNNAGG 3 cut(s) 32, 646, 1412
EcoRI GAATTC 1 cut(s) 286
EcoRII CCWGG 3 cut(s) 647, 1451, 1532
EcoT14I CCWWGG 3 cut(s) 1035, 1905, 2055
EcoT22I ATGCAT 1 cut(s) 879
EcoT38I GRGCYC 1 cut(s) 570
ErhI CCWWGG 3 cut(s) 1035, 1905, 2055
Esp3I CGTCTC 1 cut(s) 758
FaeI CATG 5 cut(s) 43, 881, 1076, 1816, 2199
FalI AAGNNNNNCTT 4 cut(s) 1077, 1109, 1329, 1361
FatI CATG 5 cut(s) 39, 877, 1072, 1812, 2195
FblI GTMKAC 3 cut(s) 864, 1801, 2104
FokI GGATG 7 cut(s) 72, 1142, 1235, 1595, 1616, 1642, 1808
FriOI GRGCYC 1 cut(s) 570
FspBI CTAG 5 cut(s) 242, 722, 1326, 1553, 1929
GlaI GCGC 1 cut(s) 919
GsaI CCCAGC 1 cut(s) 435
GsuI CTGGAG 1 cut(s) 1208
HaeIII GGCC 8 cut(s) 590, 743, 770, 827, 1319, 1451, 1772, 1823
HapII CCGG 4 cut(s) 298, 318, 563, 571
HgaI GACGC 3 cut(s) 392, 621, 665
HhaI GCGC 1 cut(s) 920
Hin1I GRCGYC 3 cut(s) 384, 393, 632
Hin1II CATG 5 cut(s) 43, 881, 1076, 1816, 2199
Hin6I GCGC 1 cut(s) 918
HinP1I GCGC 1 cut(s) 918
HincII GTYRAC 3 cut(s) 865, 1380, 1870
HindII GTYRAC 3 cut(s) 865, 1380, 1870
HindIII AAGCTT 2 cut(s) 1571, 1841
HpaII CCGG 4 cut(s) 298, 318, 563, 571
HphI GGTGA 3 cut(s) 1094, 1219, 2009
Hpy166II GTNNAC 5 cut(s) 865, 1380, 1802, 1870, 2105
Hpy8I GTNNAC 5 cut(s) 865, 1380, 1802, 1870, 2105
Hpy99I CGWCG 5 cut(s) 191, 386, 410, 548, 624
HpyAV CCTTC 5 cut(s) 251, 447, 646, 1210, 1883
HpyCH4III ACNGT 4 cut(s) 214, 1106, 1359, 1867
HpyCH4IV ACGT 1 cut(s) 393
HpySE526I ACGT 1 cut(s) 393
Hsp92I GRCGYC 3 cut(s) 384, 393, 632
Hsp92II CATG 5 cut(s) 43, 881, 1076, 1816, 2199
HspAI GCGC 1 cut(s) 918
Kpn2I TCCGGA 1 cut(s) 562
Kzo9I GATC 9 cut(s) 133, 264, 364, 577, 594, 709, 897, 1240, 1999
LmnI GCTCC 7 cut(s) 160, 565, 573, 933, 1417, 1430, 1599
LweI GCATC 8 cut(s) 334, 829, 847, 937, 1290, 1390, 1664, 2183
MaeI CTAG 5 cut(s) 242, 722, 1326, 1553, 1929
MaeII ACGT 1 cut(s) 393
MaeIII GTNAC 4 cut(s) 332, 782, 1244, 1328
MalI GATC 9 cut(s) 135, 266, 366, 579, 596, 711, 899, 1242, 2001
MboI GATC 9 cut(s) 133, 264, 364, 577, 594, 709, 897, 1240, 1999
MfeI CAATTG 1 cut(s) 660
MflI RGATCY 1 cut(s) 133
MhlI GDGCHC 4 cut(s) 570, 619, 1896, 2133
MlsI TGGCCA 1 cut(s) 1451
MluNI TGGCCA 1 cut(s) 1451
MlyI GAGTC 5 cut(s) 71, 553, 860, 1516, 2039
MmeI TCCRAC 9 cut(s) 99, 228, 555, 567, 955, 1276, 1341, 1621, 2139
Mox20I TGGCCA 1 cut(s) 1451
Mph1103I ATGCAT 1 cut(s) 879
MroI TCCGGA 1 cut(s) 562
MroXI GAANNNNTTC 2 cut(s) 197, 415
MscI TGGCCA 1 cut(s) 1451
MseI TTAA 3 cut(s) 323, 974, 1857
Msp20I TGGCCA 1 cut(s) 1451
MspA1I CMGCKG 1 cut(s) 733
MspI CCGG 4 cut(s) 298, 318, 563, 571
MspR9I CCNGG 4 cut(s) 298, 649, 1453, 1534
MunI CAATTG 1 cut(s) 660
Mva1269I GAATGC 1 cut(s) 1638
MvaI CCWGG 3 cut(s) 649, 1453, 1534
MvnI CGCG 1 cut(s) 599
NciI CCSGG 1 cut(s) 298
NdeII GATC 9 cut(s) 133, 264, 364, 577, 594, 709, 897, 1240, 1999
NlaIII CATG 5 cut(s) 43, 881, 1076, 1816, 2199
NmeAIII GCCGAG 1 cut(s) 1792
NmuCI GTSAC 2 cut(s) 782, 1244
NsiI ATGCAT 1 cut(s) 879
NspI RCATGY 1 cut(s) 1076
PceI AGGCCT 2 cut(s) 590, 743
PciI ACATGT 1 cut(s) 1072
PcsI WCGNNNNNNNCGW 2 cut(s) 390, 768
PctI GAATGC 1 cut(s) 1638
PdmI GAANNNNTTC 2 cut(s) 197, 415
PfeI GAWTC 8 cut(s) 23, 115, 327, 411, 416, 1067, 1148, 1692
PfoI TCCNGGA 1 cut(s) 296
Ple19I CGATCG 1 cut(s) 367
PleI GAGTC 5 cut(s) 71, 553, 860, 1515, 2039
PpsI GAGTC 5 cut(s) 71, 553, 860, 1515, 2039
PscI ACATGT 1 cut(s) 1072
Psp124BI GAGCTC 1 cut(s) 570
Psp6I CCWGG 3 cut(s) 647, 1451, 1532
PspFI CCCAGC 1 cut(s) 431
PspGI CCWGG 3 cut(s) 647, 1451, 1532
PspPI GGNCC 1 cut(s) 260
PstI CTGCAG 2 cut(s) 1465, 1615
PstNI CAGNNNCTG 3 cut(s) 2033, 2048, 2177
PsuI RGATCY 1 cut(s) 133
PvuI CGATCG 1 cut(s) 367
PvuII CAGCTG 1 cut(s) 733
RsaI GTAC 1 cut(s) 459
RsaNI GTAC 1 cut(s) 458
SacI GAGCTC 1 cut(s) 570
SalI GTCGAC 1 cut(s) 863
SaqAI TTAA 3 cut(s) 323, 974, 1857
Sau3AI GATC 9 cut(s) 133, 264, 364, 577, 594, 709, 897, 1240, 1999
Sau96I GGNCC 1 cut(s) 260
SchI GAGTC 5 cut(s) 71, 553, 860, 1516, 2039
ScrFI CCNGG 4 cut(s) 298, 649, 1453, 1534
SduI GDGCHC 4 cut(s) 570, 619, 1896, 2133
SfaNI GCATC 8 cut(s) 334, 829, 847, 937, 1290, 1390, 1664, 2183
SfcI CTRYAG 2 cut(s) 1461, 1611
SinI GGWCC 1 cut(s) 260
SmlI CTYRAG 2 cut(s) 1835, 1844
SmoI CTYRAG 2 cut(s) 1835, 1844
SseBI AGGCCT 2 cut(s) 590, 743
SsiI CCGC 8 cut(s) 158, 315, 599, 629, 645, 680, 828, 903
SspMI CTAG 5 cut(s) 242, 722, 1326, 1553, 1929
SstI GAGCTC 1 cut(s) 570
StuI AGGCCT 2 cut(s) 590, 743
StyD4I CCNGG 4 cut(s) 296, 647, 1451, 1532
StyI CCWWGG 3 cut(s) 1035, 1905, 2055
TaaI ACNGT 4 cut(s) 214, 1106, 1359, 1867
TaiI ACGT 1 cut(s) 396
TauI GCSGC 5 cut(s) 317, 632, 683, 830, 905
TfiI GAWTC 8 cut(s) 23, 115, 327, 411, 416, 1067, 1148, 1692
Tru1I TTAA 3 cut(s) 323, 974, 1857
Tru9I TTAA 3 cut(s) 323, 974, 1857
TscAI CASTG 3 cut(s) 217, 619, 1128
TseFI GTSAC 2 cut(s) 782, 1244
Tsp45I GTSAC 2 cut(s) 782, 1244
TspDTI ATGAA 2 cut(s) 1011, 1669
TspGWI ACGGA 1 cut(s) 423
TspRI CASTG 3 cut(s) 217, 619, 1128
VpaK11BI GGWCC 1 cut(s) 260
XagI CCTNNNNNAGG 3 cut(s) 32, 646, 1412
XapI RAATTY 2 cut(s) 286, 1738
XbaI TCTAGA 1 cut(s) 721
XceI RCATGY 1 cut(s) 1076
XmiI GTMKAC 3 cut(s) 864, 1801, 2104
XmnI GAANNNNTTC 2 cut(s) 197, 415
XspI CTAG 5 cut(s) 242, 722, 1326, 1553, 1929
ZraI GACGTC 1 cut(s) 394
Zsp2I ATGCAT 1 cut(s) 879
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.