Rh7AG311700

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0014602
Physical Location & Seq
Reverse (-)
35033294 .. 35037066
3773 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG311700.1

Sequence Viewer

Length: 2178 bp
ATGGAGGAAGAAGAGGAAATGGATTCCCTGTTCGAGGGCATGGTGTTGTTCGACCCCACTTCCAATTCCAGTGCCGACTCACACCATCCTCCTCCTCCTCCTCCTCCACCTCAGCAGAATCAGGACAACGCCCAAGATCCCAAACTTGAAATTGAAGCTCCGCCATCATCATCATCATCATCTGAACCCCTCGACGAGAACCTCTTCTCCGACCTCACTGTCCAATTCCAAACCCCACCACCACCACCACTAGACCAAGACCAAGAAGGTCCGATCAAAACCACATCCAGACAGAATTCCAGTTCCCGGAAGAAAAAAAGAGCCGCCGGATTAAGAATCGGTTACGCCAGAGATGCCAACGCTCACTCTCTCTCTTTCGACGCCGATGACGTCATCATCGCCGACGGAGCCGATTCGCTTCCCGAACCCAGCCCTTCTTCTGTATCAGTATCAGTACCAGTCCAATCCCAACCCGAACCCGAACCCGAAGCTGAAGCAGAACCCCAATCCGACGAAGCTGAAGCGACTCCGGAGCTCCGGTTGGATCAAAGCAAGGCGTTGATCGCCGAGAAGCTCAGCAGTGCTCGTCAGTTGGCGGCGTCTGTTTCCTCCGCCAGGAAGGACGCAATTGCGAGGAGGAGGACGGCGGCTGACAATCTCAATCTGGCCTCTGGCGATTACGCCAGTCTAGAGAAGCAGCTGGAAGAGGCCTGCGAGGCAGAGGATTTCGAGACGGCCGAAAGGCTTAGTGACAGCCTTGCTGCTGCTCAGGAGAAGAGGCAAGCTCTGTTGGCCGCACTCAGAGATGCTGAGGCTGAATGTGATGCTGTCGACTCCAAAATGCATGAGGTTCTCCAATCCCAGATCGCCGCAGAGGAACAATGCGCCTCTCTCCTCCAACACTTCGCAACTGATGCTTCAAATAATGCAGATTTGCTCTTGAAGGCAGCAGAGGAACTCTCTTCCACGGAAACAGACAAATGGCTTTCATCAACTGAAGCCTTGGAAGCCAAGAAGATGGAATTGGAAATTGAATCGCATATAATTGGTGATGCAGGGCTTGTCTTAAACAGTTCTATTGAGACTTCAGTGGAGGATGACAAAAGAGAGAAAGAATCTCTCTGTAAGAAAAAGGAAACTCTTACGGACGAACTGGAGAAACTTCTTGCATTGGTGAGAGAGAAGGAACAGGAGATTGCACAAAATGATCGTGACATCCAACAAGTTGAGGAAAGGATAGCTAATGTTCTCTCCGGCTTCGGGGAGATGCAATCTACTATTCAGGCCAAGTCTAGTAACTTGCAAGCAGCCCTTTCCCAGATACAGTTGGAGAGTGAAGCTCTGTCAACAAAAAAGACAGAAATCGATGCTGTCCTTACTCAGGAGCAAGAGAGGGGAGCAAAGTTGAGGGAACTGGCCAGGGTTTCTGCAGAGGAAGCAGAGGCATATCAGCAAGTTGCTGCTCTTAGAAAGAGTCTAATGTCCTCTATTTTGAAGTCCAGGGAAGATAAGGTCAGACTAGCAAAGACTGAGGAAAAGCTTTCCGAGGATGTTCAAAACCTCCAACAGGATGTTTCTGCAGCAAGAACTTCACTTCAGGAACTGTCTTCAAGAAAGTCAAGCATTCAGCAAGATATAGCATCCTCTAAGCAGAAAATTATTTTCATAGATAAAAGAATCCCAGAGCTGGAAGCAGAAAAGAAAGTTGCTGCTACTGCAAGAAATTTCAAAGAAGCTGCACGAATAGCTGCCGAGGCCAAGTCATTGAATGTTGAAAAGGATGGTATACAGATTGACATGGAAAAGGCCATCTCAGAGCTTGAGAAGCTTGAGGAAGAGATTAAAGAGACTGTCAACAGATTGCAGGAGACTGAGGGGCACATTTTGTCCAAGGAAAAAGAGGTAGCAACGGCTAGGTTTCAAAGGTTGCTACTGGTATCTGGTATCGCTAAAGCAGAAAGAGAAGCTGCTTTGGAGTTGGGTGATCTTGAAGAAGCTAACCTGCTGCTTGCAGAGGCTGAAGCAGCAGACTCTGAAGCCAAGGAACTTGAACCTATATACAACTTCAAATTGGAAGAGACTGAAAGTCTACCAAAGCACTTTATGTCTATGGTGCTCATATCCAATCTTGGGAGGAAGCAGTTGGAAGAATTGGCAGCATCTGTTCAAGTTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UVR

Protein Analysis

725

Amino Acids

79.61

Weight (kDa)

4.58

Isoelectric Point (pI)

61.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014602)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G25070
fragaria_vesca FvH4_5g26850 FvH4_5g26850
malus_domestica MD04G1004600.v1.1
prunus_persica Prupe.1G004400_v2.0.a1
pyrus_communis pycom04g00470
rosa_chinensis RchiOBHm_Chr7g0217751
rosa_laevigata RLG00000002441
rosa_multiflora Rmu_sc0000202.1_g000023 Rmu_sc0006958.1_g000001
rosa_roxburghii Rroxscaffold_3G00241710
rosa_rugosa Rorug07G0171000
rosa_samantha Rh7AG311700 Rh7BG303600 Rh7CG330500 Rh7DG311400
rosa_wichuraiana Rw7G026450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 218
AatII GACGTC 1 cut(s) 393
Acc36I ACCTGC 1 cut(s) 2010
AccI GTMKAC 3 cut(s) 831, 1786, 2089
AccIII TCCGGA 1 cut(s) 529
AciI CCGC 7 cut(s) 161, 324, 596, 612, 647, 795, 870
AclWI GGATC 2 cut(s) 131, 552
AcoI YGGCCR 3 cut(s) 735, 792, 1416
AcsI RAATTY 2 cut(s) 295, 1723
AcuI CTGAAG 7 cut(s) 513, 540, 1017, 1071, 1580, 2040, 2055
AcyI GRCGYC 3 cut(s) 381, 390, 599
AfaI GTAC 1 cut(s) 456
AfiI CCNNNNNNNGG 8 cut(s) 34, 306, 615, 1260, 1381, 1567, 1687, 2130
AhdI GACNNNNNGTC 1 cut(s) 2085
AjnI CCWGG 3 cut(s) 614, 1418, 1499
AjuI GAANNNNNNNTTGG 2 cut(s) 1007, 1039
AloI GAACNNNNNNTCC 4 cut(s) 14, 46, 191, 223
Alw21I GWGCWC 3 cut(s) 537, 586, 2118
Alw26I GTCTC 5 cut(s) 725, 1076, 1841, 1862, 2072
AlwI GGATC 2 cut(s) 131, 552
AlwNI CAGNNNCTG 4 cut(s) 1603, 2018, 2033, 2162
Aor13HI TCCGGA 1 cut(s) 529
AoxI GGCC 8 cut(s) 666, 708, 735, 792, 1284, 1416, 1755, 1806
ApoI RAATTY 2 cut(s) 295, 1723
Asp700I GAANNNNTTC 1 cut(s) 203
AspLEI GCGC 1 cut(s) 887
AspS9I GGNCC 1 cut(s) 269
AsuC2I CCSGG 1 cut(s) 307
AsuHPI GGTGA 3 cut(s) 1061, 1186, 1994
AvaII GGWCC 1 cut(s) 269
BaeGI GKGCMC 1 cut(s) 1881
BalI TGGCCA 1 cut(s) 1418
BanII GRGCYC 1 cut(s) 537
BbsI GAAGAC 1 cut(s) 1599
Bbv12I GWGCWC 3 cut(s) 537, 586, 2118
BbvCI CCTCAGC 2 cut(s) 111, 810
BccI CCATC 5 cut(s) 93, 172, 1012, 1775, 1817
BceAI ACGGC 3 cut(s) 660, 750, 1926
BciT130I CCWGG 3 cut(s) 616, 1420, 1501
BcnI CCSGG 1 cut(s) 307
BcoDI GTCTC 5 cut(s) 725, 1076, 1841, 1862, 2072
BfaI CTAG 5 cut(s) 251, 689, 1293, 1520, 1914
BfmI CTRYAG 2 cut(s) 1428, 1578
BfuAI ACCTGC 1 cut(s) 2010
BglI GCCNNNNNGGC 1 cut(s) 716
BlpI GCTNAGC 1 cut(s) 575
Bme1390I CCNGG 4 cut(s) 307, 616, 1420, 1501
Bme18I GGWCC 1 cut(s) 269
BmeRI GACNNNNNGTC 1 cut(s) 2085
BmgT120I GGNCC 1 cut(s) 269
BmiI GGNNCC 1 cut(s) 409
BmrFI CCNGG 4 cut(s) 307, 616, 1420, 1501
BmsI GCATC 9 cut(s) 343, 796, 814, 904, 1042, 1257, 1357, 1649, 2168
BpiI GAAGAC 1 cut(s) 1599
BplI GAGNNNNNCTC 6 cut(s) 769, 801, 944, 976, 1324, 1356
BpmI CTGGAG 1 cut(s) 1175
Bpu10I CCTNAGC 3 cut(s) 111, 768, 810
Bpu1102I GCTNAGC 1 cut(s) 575
BpuEI CTTGAG 2 cut(s) 1841, 1850
BpuMI CCSGG 1 cut(s) 307
Bsa29I ATCGAT 1 cut(s) 1365
BsaHI GRCGYC 3 cut(s) 381, 390, 599
BsaJI CCNNGG 8 cut(s) 966, 1002, 1419, 1500, 1545, 1752, 1890, 2040
BsaWI WCCGGW 2 cut(s) 529, 537
BsaXI ACNNNNNCTCC 4 cut(s) 191, 221, 524, 554
Bsc4I CCNNNNNNNGG 8 cut(s) 34, 306, 615, 1260, 1381, 1567, 1687, 2130
Bse1I ACTGG 7 cut(s) 69, 300, 458, 684, 1158, 1419, 1938
BseAI TCCGGA 1 cut(s) 529
BseBI CCWGG 3 cut(s) 616, 1420, 1501
BseCI ATCGAT 1 cut(s) 1365
BseDI CCNNGG 8 cut(s) 966, 1002, 1419, 1500, 1545, 1752, 1890, 2040
BseGI GGATG 8 cut(s) 85, 284, 1102, 1215, 1555, 1576, 1640, 1786
BseLI CCNNNNNNNGG 8 cut(s) 34, 306, 615, 1260, 1381, 1567, 1687, 2130
BseMII CTCAG 9 cut(s) 125, 589, 782, 801, 814, 1394, 1521, 1827, 1863
BseNI ACTGG 7 cut(s) 69, 300, 458, 684, 1158, 1419, 1938
BseRI GAGGAG 8 cut(s) 81, 84, 87, 90, 93, 649, 652, 884
BseSI GKGCMC 1 cut(s) 1881
BseX3I CGGCCG 1 cut(s) 735
BseYI CCCAGC 1 cut(s) 428
BsgI GTGCAG 1 cut(s) 1722
Bsh1285I CGRYCG 1 cut(s) 738
BshFI GGCC 8 cut(s) 668, 710, 737, 794, 1286, 1418, 1757, 1808
BshVI ATCGAT 1 cut(s) 1365
BsiEI CGRYCG 1 cut(s) 738
BsiHKAI GWGCWC 3 cut(s) 537, 586, 2118
BsiSI CCGG 5 cut(s) 307, 327, 530, 538, 1254
BslI CCNNNNNNNGG 8 cut(s) 34, 306, 615, 1260, 1381, 1567, 1687, 2130
BsmAI GTCTC 5 cut(s) 725, 1076, 1841, 1862, 2072
BsmBI CGTCTC 1 cut(s) 725
BsmI GAATGC 1 cut(s) 1623
BsnI GGCC 8 cut(s) 668, 710, 737, 794, 1286, 1418, 1757, 1808
Bsp1286I GDGCHC 4 cut(s) 537, 586, 1881, 2118
Bsp13I TCCGGA 1 cut(s) 529
Bsp143I GATC 7 cut(s) 136, 273, 544, 561, 864, 1207, 1984
Bsp1720I GCTNAGC 1 cut(s) 575
BspACI CCGC 7 cut(s) 161, 324, 596, 612, 647, 795, 870
BspANI GGCC 8 cut(s) 668, 710, 737, 794, 1286, 1418, 1757, 1808
BspCNI CTCAG 9 cut(s) 124, 588, 781, 802, 813, 1393, 1522, 1826, 1864
BspDI ATCGAT 1 cut(s) 1365
BspEI TCCGGA 1 cut(s) 529
BspLI GGNNCC 1 cut(s) 409
BspMAI CTGCAG 2 cut(s) 1432, 1582
BspMI ACCTGC 1 cut(s) 2010
BspPI GGATC 2 cut(s) 131, 552
BsrI ACTGG 7 cut(s) 69, 300, 458, 684, 1158, 1419, 1938
BssECI CCNNGG 8 cut(s) 966, 1002, 1419, 1500, 1545, 1752, 1890, 2040
BssMI GATC 7 cut(s) 136, 273, 544, 561, 864, 1207, 1984
BssNAI GTATAC 1 cut(s) 1787
BssNI GRCGYC 3 cut(s) 381, 390, 599
BssT1I CCWWGG 3 cut(s) 1002, 1890, 2040
Bst1107I GTATAC 1 cut(s) 1787
Bst2UI CCWGG 3 cut(s) 616, 1420, 1501
Bst4CI ACNGT 5 cut(s) 220, 1073, 1326, 1605, 1852
Bst6I CTCTTC 7 cut(s) 6, 209, 699, 770, 967, 1830, 2070
BstACI GRCGYC 3 cut(s) 381, 390, 599
BstAPI GCANNNNNTGC 1 cut(s) 914
BstC8I GCNNGC 4 cut(s) 712, 783, 1305, 2010
BstDSI CCRYGG 1 cut(s) 966
BstENI CCTNNNNNAGG 4 cut(s) 32, 613, 1379, 1565
BstF5I GGATG 8 cut(s) 85, 284, 1102, 1215, 1555, 1576, 1640, 1786
BstHHI GCGC 1 cut(s) 887
BstKTI GATC 7 cut(s) 139, 276, 547, 564, 867, 1210, 1987
BstMAI GTCTC 5 cut(s) 725, 1076, 1841, 1862, 2072
BstMBI GATC 7 cut(s) 136, 273, 544, 561, 864, 1207, 1984
BstMCI CGRYCG 1 cut(s) 738
BstNI CCWGG 3 cut(s) 616, 1420, 1501
BstSCI CCNGG 4 cut(s) 305, 614, 1418, 1499
BstSFI CTRYAG 2 cut(s) 1428, 1578
BstSLI GKGCMC 1 cut(s) 1881
BstV2I GAAGAC 1 cut(s) 1599
BstX2I RGATCY 1 cut(s) 136
BstXI CCANNNNNNTGG 1 cut(s) 1018
BstYI RGATCY 1 cut(s) 136
BstZ17I GTATAC 1 cut(s) 1787
BstZI CGGCCG 1 cut(s) 735
Bsu15I ATCGAT 1 cut(s) 1365
BsuRI GGCC 8 cut(s) 668, 710, 737, 794, 1286, 1418, 1757, 1808
BsuTUI ATCGAT 1 cut(s) 1365
BtgI CCRYGG 1 cut(s) 966
BtgZI GCGATG 1 cut(s) 382
BtsCI GGATG 8 cut(s) 85, 284, 1102, 1215, 1555, 1576, 1640, 1786
BtsI GCAGTG 1 cut(s) 586
BtsIMutI CAGTG 4 cut(s) 76, 216, 586, 1095
BveI ACCTGC 1 cut(s) 2010
Cac8I GCNNGC 4 cut(s) 712, 783, 1305, 2010
CaiI CAGNNNCTG 4 cut(s) 1603, 2018, 2033, 2162
CfoI GCGC 1 cut(s) 887
Cfr13I GGNCC 1 cut(s) 269
ClaI ATCGAT 1 cut(s) 1365
CseI GACGC 3 cut(s) 389, 588, 632
Csp6I GTAC 1 cut(s) 455
CviAII CATG 3 cut(s) 40, 845, 1798
CviQI GTAC 1 cut(s) 455
DpnI GATC 7 cut(s) 138, 275, 546, 563, 866, 1209, 1986
DpnII GATC 7 cut(s) 136, 273, 544, 561, 864, 1207, 1984
DrdI GACNNNNNNGTC 1 cut(s) 218
DriI GACNNNNNGTC 1 cut(s) 2085
DseDI GACNNNNNNGTC 1 cut(s) 218
EaeI YGGCCR 3 cut(s) 735, 792, 1416
EagI CGGCCG 1 cut(s) 735
Eam1104I CTCTTC 7 cut(s) 6, 209, 699, 770, 967, 1830, 2070
Eam1105I GACNNNNNGTC 1 cut(s) 2085
EarI CTCTTC 7 cut(s) 6, 209, 699, 770, 967, 1830, 2070
EciI GGCGGA 2 cut(s) 150, 601
Ecl136II GAGCTC 1 cut(s) 535
EclXI CGGCCG 1 cut(s) 735
Eco130I CCWWGG 3 cut(s) 1002, 1890, 2040
Eco147I AGGCCT 1 cut(s) 710
Eco24I GRGCYC 1 cut(s) 537
Eco47I GGWCC 1 cut(s) 269
Eco52I CGGCCG 1 cut(s) 735
Eco53kI GAGCTC 1 cut(s) 535
Eco57I CTGAAG 7 cut(s) 513, 540, 1017, 1071, 1580, 2040, 2055
EcoICRI GAGCTC 1 cut(s) 535
EcoNI CCTNNNNNAGG 4 cut(s) 32, 613, 1379, 1565
EcoRI GAATTC 1 cut(s) 295
EcoRII CCWGG 3 cut(s) 614, 1418, 1499
EcoT14I CCWWGG 3 cut(s) 1002, 1890, 2040
EcoT22I ATGCAT 1 cut(s) 846
EcoT38I GRGCYC 1 cut(s) 537
ErhI CCWWGG 3 cut(s) 1002, 1890, 2040
Esp3I CGTCTC 1 cut(s) 725
FaeI CATG 3 cut(s) 43, 848, 1801
FalI AAGNNNNNCTT 2 cut(s) 1296, 1328
FatI CATG 3 cut(s) 39, 844, 1797
FblI GTMKAC 3 cut(s) 831, 1786, 2089
FokI GGATG 8 cut(s) 72, 271, 1109, 1202, 1562, 1583, 1627, 1793
FriOI GRGCYC 1 cut(s) 537
FspBI CTAG 5 cut(s) 251, 689, 1293, 1520, 1914
GlaI GCGC 1 cut(s) 886
GsaI CCCAGC 1 cut(s) 432
GsuI CTGGAG 1 cut(s) 1175
HaeIII GGCC 8 cut(s) 668, 710, 737, 794, 1286, 1418, 1757, 1808
HapII CCGG 5 cut(s) 307, 327, 530, 538, 1254
HgaI GACGC 3 cut(s) 389, 588, 632
HhaI GCGC 1 cut(s) 887
Hin1I GRCGYC 3 cut(s) 381, 390, 599
Hin1II CATG 3 cut(s) 43, 848, 1801
Hin6I GCGC 1 cut(s) 885
HinP1I GCGC 1 cut(s) 885
HincII GTYRAC 3 cut(s) 832, 1347, 1855
HindII GTYRAC 3 cut(s) 832, 1347, 1855
HindIII AAGCTT 2 cut(s) 1538, 1826
HpaII CCGG 5 cut(s) 307, 327, 530, 538, 1254
HphI GGTGA 3 cut(s) 1061, 1186, 1994
Hpy166II GTNNAC 5 cut(s) 832, 1347, 1787, 1855, 2090
Hpy188I TCNGA 9 cut(s) 184, 211, 273, 511, 803, 1517, 1546, 1816, 2035
Hpy8I GTNNAC 5 cut(s) 832, 1347, 1787, 1855, 2090
Hpy99I CGWCG 4 cut(s) 197, 383, 407, 515
HpyAV CCTTC 5 cut(s) 260, 444, 613, 937, 1177
HpyCH4III ACNGT 5 cut(s) 220, 1073, 1326, 1605, 1852
HpyCH4IV ACGT 1 cut(s) 390
HpySE526I ACGT 1 cut(s) 390
Hsp92I GRCGYC 3 cut(s) 381, 390, 599
Hsp92II CATG 3 cut(s) 43, 848, 1801
HspAI GCGC 1 cut(s) 885
Kpn2I TCCGGA 1 cut(s) 529
Kzo9I GATC 7 cut(s) 136, 273, 544, 561, 864, 1207, 1984
LmnI GCTCC 6 cut(s) 163, 407, 532, 540, 1384, 1397
LweI GCATC 9 cut(s) 343, 796, 814, 904, 1042, 1257, 1357, 1649, 2168
MaeI CTAG 5 cut(s) 251, 689, 1293, 1520, 1914
MaeII ACGT 1 cut(s) 390
MaeIII GTNAC 4 cut(s) 341, 749, 1211, 1295
MalI GATC 7 cut(s) 138, 275, 546, 563, 866, 1209, 1986
MboI GATC 7 cut(s) 136, 273, 544, 561, 864, 1207, 1984
MfeI CAATTG 1 cut(s) 627
MflI RGATCY 1 cut(s) 136
MhlI GDGCHC 4 cut(s) 537, 586, 1881, 2118
MlsI TGGCCA 1 cut(s) 1418
MluNI TGGCCA 1 cut(s) 1418
MlyI GAGTC 5 cut(s) 71, 520, 827, 1483, 2024
MmeI TCCRAC 8 cut(s) 234, 522, 534, 922, 1243, 1308, 1588, 2124
Mox20I TGGCCA 1 cut(s) 1418
Mph1103I ATGCAT 1 cut(s) 846
MroI TCCGGA 1 cut(s) 529
MroXI GAANNNNTTC 1 cut(s) 203
MscI TGGCCA 1 cut(s) 1418
MseI TTAA 4 cut(s) 332, 1067, 1842, 2176
Msp20I TGGCCA 1 cut(s) 1418
MspA1I CMGCKG 1 cut(s) 700
MspI CCGG 5 cut(s) 307, 327, 530, 538, 1254
MspR9I CCNGG 4 cut(s) 307, 616, 1420, 1501
MunI CAATTG 1 cut(s) 627
Mva1269I GAATGC 1 cut(s) 1623
MvaI CCWGG 3 cut(s) 616, 1420, 1501
NciI CCSGG 1 cut(s) 307
NdeII GATC 7 cut(s) 136, 273, 544, 561, 864, 1207, 1984
NlaIII CATG 3 cut(s) 43, 848, 1801
NlaIV GGNNCC 1 cut(s) 409
NmeAIII GCCGAG 2 cut(s) 592, 1777
NmuCI GTSAC 2 cut(s) 749, 1211
NsiI ATGCAT 1 cut(s) 846
PceI AGGCCT 1 cut(s) 710
PcsI WCGNNNNNNNCGW 2 cut(s) 387, 735
PctI GAATGC 1 cut(s) 1623
PdmI GAANNNNTTC 1 cut(s) 203
PfeI GAWTC 7 cut(s) 23, 118, 336, 413, 1034, 1115, 1677
PfoI TCCNGGA 1 cut(s) 305
PleI GAGTC 5 cut(s) 71, 520, 827, 1482, 2024
PpsI GAGTC 5 cut(s) 71, 520, 827, 1482, 2024
Psp124BI GAGCTC 1 cut(s) 537
Psp6I CCWGG 3 cut(s) 614, 1418, 1499
PspFI CCCAGC 1 cut(s) 428
PspGI CCWGG 3 cut(s) 614, 1418, 1499
PspN4I GGNNCC 1 cut(s) 409
PspPI GGNCC 1 cut(s) 269
PstI CTGCAG 2 cut(s) 1432, 1582
PstNI CAGNNNCTG 4 cut(s) 1603, 2018, 2033, 2162
PsuI RGATCY 1 cut(s) 136
PvuII CAGCTG 1 cut(s) 700
RsaI GTAC 1 cut(s) 456
RsaNI GTAC 1 cut(s) 455
SacI GAGCTC 1 cut(s) 537
SalI GTCGAC 1 cut(s) 830
SaqAI TTAA 4 cut(s) 332, 1067, 1842, 2176
Sau3AI GATC 7 cut(s) 136, 273, 544, 561, 864, 1207, 1984
Sau96I GGNCC 1 cut(s) 269
SchI GAGTC 5 cut(s) 71, 520, 827, 1483, 2024
ScrFI CCNGG 4 cut(s) 307, 616, 1420, 1501
SduI GDGCHC 4 cut(s) 537, 586, 1881, 2118
SfaNI GCATC 9 cut(s) 343, 796, 814, 904, 1042, 1257, 1357, 1649, 2168
SfcI CTRYAG 2 cut(s) 1428, 1578
SinI GGWCC 1 cut(s) 269
SmlI CTYRAG 2 cut(s) 1820, 1829
SmoI CTYRAG 2 cut(s) 1820, 1829
SseBI AGGCCT 1 cut(s) 710
SsiI CCGC 7 cut(s) 161, 324, 596, 612, 647, 795, 870
SspMI CTAG 5 cut(s) 251, 689, 1293, 1520, 1914
SstI GAGCTC 1 cut(s) 537
StuI AGGCCT 1 cut(s) 710
StyD4I CCNGG 4 cut(s) 305, 614, 1418, 1499
StyI CCWWGG 3 cut(s) 1002, 1890, 2040
TaaI ACNGT 5 cut(s) 220, 1073, 1326, 1605, 1852
TaiI ACGT 1 cut(s) 393
TaqI TCGA 7 cut(s) 33, 51, 192, 378, 729, 831, 1365
TauI GCSGC 5 cut(s) 326, 599, 650, 797, 872
TfiI GAWTC 7 cut(s) 23, 118, 336, 413, 1034, 1115, 1677
Tru1I TTAA 4 cut(s) 332, 1067, 1842, 2176
Tru9I TTAA 4 cut(s) 332, 1067, 1842, 2176
TscAI CASTG 4 cut(s) 76, 223, 586, 1095
TseFI GTSAC 2 cut(s) 749, 1211
Tsp45I GTSAC 2 cut(s) 749, 1211
TspDTI ATGAA 2 cut(s) 978, 1654
TspGWI ACGGA 3 cut(s) 420, 983, 1160
TspRI CASTG 4 cut(s) 76, 223, 586, 1095
VpaK11BI GGWCC 1 cut(s) 269
XagI CCTNNNNNAGG 4 cut(s) 32, 613, 1379, 1565
XapI RAATTY 2 cut(s) 295, 1723
XbaI TCTAGA 1 cut(s) 688
XmiI GTMKAC 3 cut(s) 831, 1786, 2089
XmnI GAANNNNTTC 1 cut(s) 203
XspI CTAG 5 cut(s) 251, 689, 1293, 1520, 1914
ZraI GACGTC 1 cut(s) 391
Zsp2I ATGCAT 1 cut(s) 846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.