Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002973

Physical Location & Seq

Genomic Coordinates Reverse (-)

17185440 .. 17189978

Gene Structure 4539 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G42870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2793 bp

ATGAATGCCGTCGGTAGGATCGGAAGCTATATCTACCGTGGTGTAGGTACGGTTTCAGGTCCGTTTCATCCATTTGGTGGTGCGATAGACATTATCGTTGTTGAACAACCTGATGGAACGTTTAAATCGTCTCCTTGGTATGTTAGATTTGGGAAATTTCAAGGGGTTTTGAAGAATGGTAGGAATTTGATCAGAATTGATGTTAATGGTGTTGATTCTGGTTTCAATATGTATTTAGCTCATACTGGACAAGCTTATTTTCTTAGAGAAGTTGAAGATGTTGTTGGTGAATCTGAGAGTGGTGAAGTTTATACTTTGTCTTCTGGTGATGAAGCTGAGACTACTAGTAGGGATGATGTTGTTGATAAGGTTAAGATTCCTTTGAAGTCTAGGAGTTGTAACTATGATTCTCCTAGTCCTCGTACTGGTAATGGGAAGATTGTTGGTAAGCCTGGGATTTTAGGGTATGTGTTTGGTGGGAGGTCTGTTAGAGAGAGTCAAGATTGTGGTGTGGAGAGAGCTGAGATTGCTGCTGATTTATTGGAGGTTAAGTGGTCTACTAATATCGATACGCGTAAGCGTGGAAAAGGTATGTCTTCTGAGTCTTTGGATGGTAAAGACTATGGTGAGAGTACTAGTACTAGTGGAAAATCTTGTGTTGAGGGTAGCTCTGAGATGCTAGTTGATAGCGATTCGATATTGGAGACTCCTCTTGTTGCATCTCCTACATTGCGGTTTCTTGATGAGAAAGAGCAGGATTTTCGTGAAAGCACTAATGTGGAAGATTATTGTGAAGAGGATGGATCGAGTGGAGTTGTTGTTGAAAATGGTTTATGTGAAGCATCGAGTATGGTGTTCTCTGTTACTAGTGAAGGGAGTGGAAACGTAGAGATCTTTGTCGAACCAAGAACCGAGGCACTAGCAGAGGATGCTGTAAGTGGAAGCGATCTGGATTCCAAGCAAGAACTGTTAAGGGCTCCTGAATCTGTGGAAATTGCAACATTGGGTTCAGCTGACCAAGCGGATATGGGGAGCATTGGCACTTCTCAAGAAGGAAGCAGCACTGGCTCTCCAGTTCAAGATGAAAATAAAATCACCATAAAAGATATGCATATCTCGGCAGGAGATTTTGAGAAGTCCCAGTCAGCAAGTGGAGAAAGCATCCTGCAACCAGAGATAGAAGAAGAACAATTTTCCTTTAGCGATCTTGATGAATGTAAACCTGGTGGTAATAGTTCTGTAGGGTCAAGTTCTTCTGACACTGTAAAAGTTGATGGGAAAGAGAGTTATGATGAAACTAAAACTAGTCCTGAAAAAGGCGTGGAGAACACAATGGCCTTGTCAGAGCCGATTAACATAGAGAGAAAAAAGGATATCTTCACAGATGAGATGGAGCGGTTGGTAGGATCATTACCGATTATGCGGCTTCAAAACAACGATGATATGGATGCCAGTCCTTCTCAGCCCTTGAGCCAGTCATTTGACCCATGTTTCAATACTTCAAAGTTGGATTTGAGAGAAGATGAGTCGAGCTCGGGGGGTTTAGATGCAGAAAGCGTTGCTGAGAGTAGCCCAAAATTAAAGGCATTTAAACATGTTATAGCTAATCCTGAAGTGGTCGAGCTCTCTCTCTGCAAGCACTTATTAAGTGAAGGAATGGGAGCAGAAGCGGCTTCTCAGGCTTTCAATTCCGAAAAACTGGATATGGAAAAGTTTGCTTCTTTGGGCCCATCGATCCTGGAGAACGATAAGCTTGTCGTGAAGATTGGTGGCTGCTATTTTCCATGGGATGCAGCAGCTCCTATTATCTTAGGAGTGGTTTCATTTGGGACTGCCCAAGTATTTGAACCCAAGGGCATGATAGCTGTTGACCGGAATGAGAAACCTGGTGATGTATTAGCTCAAGGCAGTGGAAGCTGGAAACTTTGGCCTTTCTCTCTGCGAAGATCAACAAAAGAAGCTGAAGCTTCTCCTTCTGGGGACACAGCTGAACCTGAAGAGAAACAAGAGAAGTCGTCCCCAAGACCAATGAAAAAGACTGTCAGGGCACTAACTCCAACTTCTGAACAATTGGCTTCGCTAGATCTGAAAGATGGAATGAATTCCGTGACTTTTACGTTCTCCACCAATATTGTGGGTACACAACAGGTAGACGCAAGGATTTACTTATGGAAATGGAATTCGCGCATAGTTGTGTCAGATGTAGATGGTACCATCACAAGATCGGATGTATTAGGCCAGTTTATGCCTTTGGTTGGTATAGATTGGTCACAAACAGGTGTTACACATTTGTTTTCGGCTGTAAAGGAAAATGGATATCAGTTGATATTTTTAAGTGCACGCGCGATTTCTCAAGCCTCAGTCACAAGACAATTTCTAGTTAATCTCAAGCAGGACGGAAAAGCATTGCCGGATGGGCCTGTTGTTATCTCTCCTGATGGTCTCTTTCCTTCGTTGTTTCGGGAAGTAATTAGAAGAGCACCTCATGAATTCAAGATTGCTTGCTTAGAGGAGATACGGGGCTTGTTTCCTCCCGAACACAACCCATTCTATGCTGGTTTTGGAAACAGAGACACAGATGAGATAAGCTACCTTAAAGTCGGAATCCCCCGAGGAAAGATCTTCATTATTAACCCAAAGGGAGAAGTAGCTGTGAATCGTAGAATTGATACAAGATCATACACAAATCTTCATACTCTTGTTAACAGAATGTTCCCAGCTACATCCTCTTCAGAACCGGAGGACTTTAACACATGGAATTTCTGGAAACTGCCTCCTCCATCGCTTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009247 GO:0009987 GO:0016020 GO:0019374 GO:0019375 GO:0019637 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046467 GO:0048046 GO:0071704 GO:0090407 GO:1901135 GO:1901137 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

LNS2 Lipin_N Lipin_mid

Protein Analysis

930

Amino Acids

101.22

Weight (kDa)

4.7

Isoelectric Point (pI)

46.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipin_N	PF04571	1 - 93	1.3e-24	lipin, N-terminal conserved region
Lipin_mid	PF16876	540 - 640	1.7e-15	Lipin/Ned1/Smp2 multi-domain protein middle domain
LNS2	PF08235	683 - 906	5.2e-94	LNS2 (Lipin/Ned1/Smp2)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002973)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42870 AT5G42870
fragaria_vesca	FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540
malus_domestica	MD15G1030100.v1.1 MD15G1084000.v1.1
prunus_persica	Prupe.1G437400_v2.0.a1 Prupe.1G437400_v2.0.a1 Prupe.1G437400_v2.0.a1
pyrus_communis	pycom08g08400 pycom15g07920
rosa_chinensis	RchiOBHm_Chr6g0307611 RchiOBHm_Chr6g0307781
rosa_laevigata	RLG00000010701
rosa_multiflora	Rmu_sc0000031.1_g000031
rosa_roxburghii	Rroxscaffold_7G00160890
rosa_rugosa	Rorug06G0360900
rosa_samantha	Rh6AG469900 Rh6BG480400 Rh6CG486100 Rh6DG472500
rosa_wichuraiana	Rw6G041030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2210
AccB1I	GGYRCC	1 cut(s)	2210
AccB7I	CCANNNNNTGG	1 cut(s)	77
AccBSI	CCGCTC	1 cut(s)	1396
AccI	GTMKAC	2 cut(s)	557, 2151
AccII	CGCG	4 cut(s)	574, 2185, 2343, 2345
AciI	CCGC	5 cut(s)	733, 1022, 1396, 1423, 1670
AclI	AACGTT	1 cut(s)	119
AclWI	GGATC	4 cut(s)	26, 811, 1414, 1729
AcsI	RAATTY	6 cut(s)	155, 184, 2101, 2179, 2489, 2758
AcuI	CTGAAG	4 cut(s)	1632, 1983, 2016, 2715
AfaI	GTAC	6 cut(s)	49, 424, 634, 640, 2140, 2212
AfiI	CCNNNNNNNGG	5 cut(s)	15, 77, 425, 1316, 2255
AflIII	ACRYGT	2 cut(s)	572, 1594
AhlI	ACTAGT	5 cut(s)	344, 635, 641, 866, 1304
AjnI	CCWGG	4 cut(s)	451, 1222, 1737, 1885
AjuI	GAANNNNNNNTTGG	2 cut(s)	267, 299
AleI	CACNNNNGTG	1 cut(s)	776
Alw21I	GWGCWC	4 cut(s)	1535, 1626, 2341, 2482
Alw26I	GTCTC	5 cut(s)	135, 332, 698, 2447, 2565
Alw44I	GTGCAC	1 cut(s)	2337
AlwI	GGATC	4 cut(s)	26, 811, 1414, 1729
Ama87I	CYCGRG	2 cut(s)	1534, 2610
AoxI	GGCC	5 cut(s)	1335, 1726, 1928, 2236, 2417
ApaI	GGGCCC	1 cut(s)	1730
ApaLI	GTGCAC	1 cut(s)	2337
ApeKI	GCWGC	5 cut(s)	530, 1059, 1773, 1793, 1796
ApoI	RAATTY	6 cut(s)	155, 184, 2101, 2179, 2489, 2758
Asp700I	GAANNNNTTC	1 cut(s)	2101
Asp718I	GGTACC	1 cut(s)	2210
AspLEI	GCGC	2 cut(s)	2187, 2345
AspS9I	GGNCC	4 cut(s)	59, 1726, 1727, 2417
AsuHPI	GGTGA	6 cut(s)	299, 314, 338, 638, 1087, 1901
AvaI	CYCGRG	2 cut(s)	1534, 2610
AvaII	GGWCC	1 cut(s)	59
BaeGI	GKGCMC	3 cut(s)	1730, 2050, 2341
BanI	GGYRCC	1 cut(s)	2210
BanII	GRGCYC	4 cut(s)	979, 1535, 1626, 1730
BbsI	GAAGAC	2 cut(s)	312, 588
Bbv12I	GWGCWC	4 cut(s)	1535, 1626, 2341, 2482
BbvI	GCAGC	5 cut(s)	517, 1071, 1760, 1805, 1808
BcgI	CGANNNNNNTGC	2 cut(s)	743, 777
BciT130I	CCWGG	4 cut(s)	453, 1224, 1739, 1887
BclI	TGATCA	1 cut(s)	189
BcoDI	GTCTC	5 cut(s)	135, 332, 698, 2447, 2565
BcuI	ACTAGT	5 cut(s)	344, 635, 641, 866, 1304
BfmI	CTRYAG	1 cut(s)	1239
BglI	GCCNNNNNGGC	1 cut(s)	2416
BglII	AGATCT	3 cut(s)	891, 2083, 2619
BisI	GCNGC	7 cut(s)	531, 1060, 1424, 1671, 1774, 1794, 1797
BlsI	GCNGC	7 cut(s)	532, 1061, 1425, 1672, 1775, 1795, 1798
BmcAI	AGTACT	2 cut(s)	634, 640
Bme1390I	CCNGG	4 cut(s)	453, 1224, 1739, 1887
Bme18I	GGWCC	1 cut(s)	59
BmeT110I	CYCGRG	2 cut(s)	1534, 2610
BmgT120I	GGNCC	4 cut(s)	59, 1726, 1727, 2417
BmiI	GGNNCC	3 cut(s)	978, 1728, 2212
BmrFI	CCNGG	4 cut(s)	453, 1224, 1739, 1887
BmrI	ACTGGG	1 cut(s)	1135
BmsI	GCATC	8 cut(s)	666, 728, 851, 919, 1170, 1438, 1537, 1780
BmuI	ACTGGG	1 cut(s)	1135
BpiI	GAAGAC	2 cut(s)	312, 588
BplI	GAGNNNNNCTC	4 cut(s)	653, 685, 1517, 1549
BpmI	CTGGAG	2 cut(s)	1056, 1760
BpuEI	CTTGAG	5 cut(s)	1032, 1489, 1887, 2337, 2372
Bsa29I	ATCGAT	2 cut(s)	567, 1733
BsaI	GGTCTC	1 cut(s)	2447
BsaJI	CCNNGG	7 cut(s)	37, 134, 452, 912, 1784, 1851, 2611
BsaWI	WCCGGW	2 cut(s)	1872, 2737
BsaXI	ACNNNNNCTCC	6 cut(s)	536, 566, 804, 834, 1054, 1084
Bsc4I	CCNNNNNNNGG	5 cut(s)	15, 77, 425, 1316, 2255
Bse1I	ACTGG	9 cut(s)	250, 430, 1069, 1073, 1141, 1452, 1474, 1704, 2239
Bse3DI	GCAATG	2 cut(s)	728, 2405
BseBI	CCWGG	4 cut(s)	453, 1224, 1739, 1887
BseCI	ATCGAT	2 cut(s)	567, 1733
BseDI	CCNNGG	7 cut(s)	37, 134, 452, 912, 1784, 1851, 2611
BseLI	CCNNNNNNNGG	5 cut(s)	15, 77, 425, 1316, 2255
BseMI	GCAATG	2 cut(s)	728, 2405
BseMII	CTCAG	9 cut(s)	285, 327, 513, 591, 663, 1475, 1554, 1691, 2373
BseNI	ACTGG	9 cut(s)	250, 430, 1069, 1073, 1141, 1452, 1474, 1704, 2239
BseRI	GAGGAG	3 cut(s)	699, 2525, 2766
BseSI	GKGCMC	3 cut(s)	1730, 2050, 2341
BseXI	GCAGC	5 cut(s)	517, 1071, 1760, 1805, 1808
BseYI	CCCAGC	1 cut(s)	2716
Bsh1236I	CGCG	4 cut(s)	574, 2185, 2343, 2345
BshFI	GGCC	5 cut(s)	1337, 1728, 1930, 2238, 2419
BshNI	GGYRCC	1 cut(s)	2210
BshVI	ATCGAT	2 cut(s)	567, 1733
BsiHKAI	GWGCWC	4 cut(s)	1535, 1626, 2341, 2482
BsiHKCI	CYCGRG	2 cut(s)	1534, 2610
BsiSI	CCGG	3 cut(s)	1873, 2411, 2738
BslFI	GGGAC	4 cut(s)	1123, 1843, 1994, 2002
BslI	CCNNNNNNNGG	5 cut(s)	15, 77, 425, 1316, 2255
BsmAI	GTCTC	5 cut(s)	135, 332, 698, 2447, 2565
BsmBI	CGTCTC	1 cut(s)	135
BsmFI	GGGAC	4 cut(s)	1123, 1843, 1994, 2002
BsmI	GAATGC	1 cut(s)	10
BsnI	GGCC	5 cut(s)	1337, 1728, 1930, 2238, 2419
Bso31I	GGTCTC	1 cut(s)	2447
BsoBI	CYCGRG	2 cut(s)	1534, 2610
Bsp120I	GGGCCC	1 cut(s)	1726
Bsp1286I	GDGCHC	7 cut(s)	979, 1535, 1626, 1730, 2050, 2341, 2482
Bsp19I	CCATGG	1 cut(s)	1784
BspACI	CCGC	5 cut(s)	733, 1022, 1396, 1423, 1670
BspANI	GGCC	5 cut(s)	1337, 1728, 1930, 2238, 2419
BspCNI	CTCAG	9 cut(s)	286, 328, 514, 592, 664, 1474, 1555, 1690, 2372
BspDI	ATCGAT	2 cut(s)	567, 1733
BspFNI	CGCG	4 cut(s)	574, 2185, 2343, 2345
BspHI	TCATGA	1 cut(s)	2485
BspLI	GGNNCC	3 cut(s)	978, 1728, 2212
BspPI	GGATC	4 cut(s)	26, 811, 1414, 1729
BspQI	GCTCTTC	1 cut(s)	2470
BspT107I	GGYRCC	1 cut(s)	2210
BspTNI	GGTCTC	1 cut(s)	2447
BsrBI	CCGCTC	1 cut(s)	1396
BsrDI	GCAATG	2 cut(s)	728, 2405
BsrI	ACTGG	9 cut(s)	250, 430, 1069, 1073, 1141, 1452, 1474, 1704, 2239
BssECI	CCNNGG	7 cut(s)	37, 134, 452, 912, 1784, 1851, 2611
BssT1I	CCWWGG	3 cut(s)	134, 1784, 1851
Bst2UI	CCWGG	4 cut(s)	453, 1224, 1739, 1887
Bst4CI	ACNGT	5 cut(s)	38, 52, 969, 1264, 2041
Bst6I	CTCTTC	4 cut(s)	789, 1992, 2470, 2734
BstAPI	GCANNNNNTGC	1 cut(s)	929
BstC8I	GCNNGC	3 cut(s)	1637, 2341, 2503
BstDSI	CCRYGG	2 cut(s)	37, 1784
BstENI	CCTNNNNNAGG	1 cut(s)	1314
BstFNI	CGCG	4 cut(s)	574, 2185, 2343, 2345
BstHHI	GCGC	2 cut(s)	2187, 2345
BstMAI	GTCTC	5 cut(s)	135, 332, 698, 2447, 2565
BstMWI	GCNNNNNNNGC	8 cut(s)	527, 929, 1019, 1065, 1670, 1679, 1914, 2416
BstNI	CCWGG	4 cut(s)	453, 1224, 1739, 1887
BstNSI	RCATGY	1 cut(s)	1598
BstSCI	CCNGG	4 cut(s)	451, 1222, 1737, 1885
BstSFI	CTRYAG	1 cut(s)	1239
BstSLI	GKGCMC	3 cut(s)	1730, 2050, 2341
BstUI	CGCG	4 cut(s)	574, 2185, 2343, 2345
BstV1I	GCAGC	5 cut(s)	517, 1071, 1760, 1805, 1808
BstV2I	GAAGAC	2 cut(s)	312, 588
BstX2I	RGATCY	3 cut(s)	891, 2083, 2619
BstXI	CCANNNNNNTGG	1 cut(s)	2134
BstYI	RGATCY	3 cut(s)	891, 2083, 2619
Bsu15I	ATCGAT	2 cut(s)	567, 1733
BsuRI	GGCC	5 cut(s)	1337, 1728, 1930, 2238, 2419
BsuTUI	ATCGAT	2 cut(s)	567, 1733
BtgI	CCRYGG	2 cut(s)	37, 1784
BtgZI	GCGATG	1 cut(s)	2766
BtsI	GCAGTG	1 cut(s)	1915
BtsIMutI	CAGTG	3 cut(s)	1062, 1260, 1915
Cac8I	GCNNGC	3 cut(s)	1637, 2341, 2503
CciI	TCATGA	1 cut(s)	2485
CfoI	GCGC	2 cut(s)	2187, 2345
Cfr13I	GGNCC	4 cut(s)	59, 1726, 1727, 2417
ClaI	ATCGAT	2 cut(s)	567, 1733
CseI	GACGC	1 cut(s)	2162
CsiI	ACCWGGT	2 cut(s)	1222, 1885
Csp6I	GTAC	6 cut(s)	48, 423, 633, 639, 2139, 2211
CspCI	CAANNNNNGTGG	2 cut(s)	2113, 2148
CviAII	CATG	6 cut(s)	1488, 1595, 1785, 1858, 2486, 2754
CviQI	GTAC	6 cut(s)	48, 423, 633, 639, 2139, 2211
DraI	TTTAAA	2 cut(s)	124, 1591
Eam1104I	CTCTTC	4 cut(s)	789, 1992, 2470, 2734
EarI	CTCTTC	4 cut(s)	789, 1992, 2470, 2734
Ecl136II	GAGCTC	2 cut(s)	1533, 1624
Eco130I	CCWWGG	3 cut(s)	134, 1784, 1851
Eco24I	GRGCYC	4 cut(s)	979, 1535, 1626, 1730
Eco31I	GGTCTC	1 cut(s)	2447
Eco32I	GATATC	2 cut(s)	1375, 2318
Eco47I	GGWCC	1 cut(s)	59
Eco53kI	GAGCTC	2 cut(s)	1533, 1624
Eco57I	CTGAAG	4 cut(s)	1632, 1983, 2016, 2715
Eco88I	CYCGRG	2 cut(s)	1534, 2610
EcoICRI	GAGCTC	2 cut(s)	1533, 1624
EcoNI	CCTNNNNNAGG	1 cut(s)	1314
EcoRI	GAATTC	3 cut(s)	2101, 2179, 2489
EcoRII	CCWGG	4 cut(s)	451, 1222, 1737, 1885
EcoRV	GATATC	2 cut(s)	1375, 2318
EcoT14I	CCWWGG	3 cut(s)	134, 1784, 1851
EcoT22I	ATGCAT	1 cut(s)	1113
EcoT38I	GRGCYC	4 cut(s)	979, 1535, 1626, 1730
ErhI	CCWWGG	3 cut(s)	134, 1784, 1851
Esp3I	CGTCTC	1 cut(s)	135
FaeI	CATG	6 cut(s)	1491, 1598, 1788, 1861, 2489, 2757
FalI	AAGNNNNNCTT	2 cut(s)	1361, 1393
FaqI	GGGAC	4 cut(s)	1123, 1843, 1994, 2002
FatI	CATG	6 cut(s)	1487, 1594, 1784, 1857, 2485, 2753
FbaI	TGATCA	1 cut(s)	189
FblI	GTMKAC	2 cut(s)	557, 2151
Fnu4HI	GCNGC	7 cut(s)	531, 1060, 1424, 1671, 1774, 1794, 1797
FriOI	GRGCYC	4 cut(s)	979, 1535, 1626, 1730
Fsp4HI	GCNGC	7 cut(s)	531, 1060, 1424, 1671, 1774, 1794, 1797
GlaI	GCGC	2 cut(s)	2186, 2344
GluI	GCNGC	7 cut(s)	531, 1060, 1424, 1671, 1774, 1794, 1797
GsaI	CCCAGC	1 cut(s)	2720
GsuI	CTGGAG	2 cut(s)	1056, 1760
HaeIII	GGCC	5 cut(s)	1337, 1728, 1930, 2238, 2419
HapII	CCGG	3 cut(s)	1873, 2411, 2738
HgaI	GACGC	1 cut(s)	2162
HhaI	GCGC	2 cut(s)	2187, 2345
Hin1II	CATG	6 cut(s)	1491, 1598, 1788, 1861, 2489, 2757
Hin6I	GCGC	2 cut(s)	2185, 2343
HinP1I	GCGC	2 cut(s)	2185, 2343
HincII	GTYRAC	2 cut(s)	1870, 2704
HindII	GTYRAC	2 cut(s)	1870, 2704
HindIII	AAGCTT	3 cut(s)	252, 1751, 1965
HpaI	GTTAAC	1 cut(s)	2704
HpaII	CCGG	3 cut(s)	1873, 2411, 2738
HphI	GGTGA	6 cut(s)	299, 314, 338, 638, 1087, 1901
Hpy166II	GTNNAC	7 cut(s)	558, 1220, 1870, 2141, 2152, 2339, 2704
Hpy8I	GTNNAC	7 cut(s)	558, 1220, 1870, 2141, 2152, 2339, 2704
Hpy99I	CGWCG	1 cut(s)	14
HpyAV	CCTTC	6 cut(s)	866, 1046, 1467, 1646, 1983, 2460
HpyCH4III	ACNGT	5 cut(s)	38, 52, 969, 1264, 2041
HpyCH4IV	ACGT	3 cut(s)	119, 885, 2117
HpyCH4V	TGCA	8 cut(s)	719, 998, 1111, 1168, 1550, 1635, 1793, 2339
HpyF10VI	GCNNNNNNNGC	8 cut(s)	527, 929, 1019, 1065, 1670, 1679, 1914, 2416
HpySE526I	ACGT	3 cut(s)	119, 885, 2117
Hsp92II	CATG	6 cut(s)	1491, 1598, 1788, 1861, 2489, 2757
HspAI	GCGC	2 cut(s)	2185, 2343
KpnI	GGTACC	1 cut(s)	2214
Ksp22I	TGATCA	1 cut(s)	189
KspAI	GTTAAC	1 cut(s)	2704
LguI	GCTCTTC	1 cut(s)	2470
LmnI	GCTCC	5 cut(s)	982, 1032, 1393, 1661, 1804
Lsp1109I	GCAGC	5 cut(s)	517, 1071, 1760, 1805, 1808
LweI	GCATC	8 cut(s)	666, 728, 851, 919, 1170, 1438, 1537, 1780
MabI	ACCWGGT	2 cut(s)	1222, 1885
MaeII	ACGT	3 cut(s)	119, 885, 2117
MaeIII	GTNAC	6 cut(s)	398, 862, 2107, 2268, 2281, 2362
MbiI	CCGCTC	1 cut(s)	1396
MfeI	CAATTG	1 cut(s)	2069
MflI	RGATCY	3 cut(s)	891, 2083, 2619
MhlI	GDGCHC	7 cut(s)	979, 1535, 1626, 1730, 2050, 2341, 2482
MluI	ACGCGT	1 cut(s)	572
MlyI	GAGTC	4 cut(s)	505, 611, 700, 1535
MmeI	TCCRAC	3 cut(s)	1488, 2081, 2581
Mph1103I	ATGCAT	1 cut(s)	1113
MroXI	GAANNNNTTC	1 cut(s)	2101
MslI	CAYNNNNRTG	2 cut(s)	776, 2192
MspA1I	CMGCKG	2 cut(s)	1013, 1988
MspI	CCGG	3 cut(s)	1873, 2411, 2738
MspR9I	CCNGG	4 cut(s)	453, 1224, 1739, 1887
MunI	CAATTG	1 cut(s)	2069
Mva1269I	GAATGC	1 cut(s)	10
MvaI	CCWGG	4 cut(s)	453, 1224, 1739, 1887
MvnI	CGCG	4 cut(s)	574, 2185, 2343, 2345
MwoI	GCNNNNNNNGC	8 cut(s)	527, 929, 1019, 1065, 1670, 1679, 1914, 2416
NcoI	CCATGG	1 cut(s)	1784
NlaIII	CATG	6 cut(s)	1491, 1598, 1788, 1861, 2489, 2757
NlaIV	GGNNCC	3 cut(s)	978, 1728, 2212
NmeAIII	GCCGAG	1 cut(s)	1097
NmuCI	GTSAC	3 cut(s)	2107, 2268, 2362
NsiI	ATGCAT	1 cut(s)	1113
NspI	RCATGY	1 cut(s)	1598
OliI	CACNNNNGTG	1 cut(s)	776
PagI	TCATGA	1 cut(s)	2485
PciI	ACATGT	1 cut(s)	1594
PciSI	GCTCTTC	1 cut(s)	2470
PcsI	WCGNNNNNNNCGW	1 cut(s)	125
PctI	GAATGC	1 cut(s)	10
PdmI	GAANNNNTTC	1 cut(s)	2101
PfeI	GAWTC	9 cut(s)	215, 290, 376, 407, 692, 953, 983, 2604, 2656
PflMI	CCANNNNNTGG	1 cut(s)	77
PfoI	TCCNGGA	1 cut(s)	1737
PkrI	GCNGC	7 cut(s)	532, 1061, 1425, 1672, 1775, 1795, 1798
PleI	GAGTC	4 cut(s)	504, 610, 700, 1534
PpsI	GAGTC	4 cut(s)	504, 610, 700, 1534
PscI	ACATGT	1 cut(s)	1594
Psp124BI	GAGCTC	2 cut(s)	1535, 1626
Psp1406I	AACGTT	1 cut(s)	119
Psp6I	CCWGG	4 cut(s)	451, 1222, 1737, 1885
PspFI	CCCAGC	1 cut(s)	2716
PspGI	CCWGG	4 cut(s)	451, 1222, 1737, 1885
PspN4I	GGNNCC	3 cut(s)	978, 1728, 2212
PspOMI	GGGCCC	1 cut(s)	1726
PspPI	GGNCC	4 cut(s)	59, 1726, 1727, 2417
PsuI	RGATCY	3 cut(s)	891, 2083, 2619
PvuII	CAGCTG	2 cut(s)	1013, 1988
RsaI	GTAC	6 cut(s)	49, 424, 634, 640, 2140, 2212
RsaNI	GTAC	6 cut(s)	48, 423, 633, 639, 2139, 2211
RseI	CAYNNNNRTG	2 cut(s)	776, 2192
SacI	GAGCTC	2 cut(s)	1535, 1626
SapI	GCTCTTC	1 cut(s)	2470
SatI	GCNGC	7 cut(s)	531, 1060, 1424, 1671, 1774, 1794, 1797
Sau96I	GGNCC	4 cut(s)	59, 1726, 1727, 2417
ScaI	AGTACT	2 cut(s)	634, 640
SchI	GAGTC	4 cut(s)	505, 611, 700, 1535
ScrFI	CCNGG	4 cut(s)	453, 1224, 1739, 1887
SduI	GDGCHC	7 cut(s)	979, 1535, 1626, 1730, 2050, 2341, 2482
SexAI	ACCWGGT	2 cut(s)	1222, 1885
SfaNI	GCATC	8 cut(s)	666, 728, 851, 919, 1170, 1438, 1537, 1780
SfcI	CTRYAG	1 cut(s)	1239
SinI	GGWCC	1 cut(s)	59
SmiMI	CAYNNNNRTG	2 cut(s)	776, 2192
SmlI	CTYRAG	5 cut(s)	1047, 1468, 1902, 2352, 2387
SmoI	CTYRAG	5 cut(s)	1047, 1468, 1902, 2352, 2387
SpeI	ACTAGT	5 cut(s)	344, 635, 641, 866, 1304
SsiI	CCGC	5 cut(s)	733, 1022, 1396, 1423, 1670
SspI	AATATT	1 cut(s)	2131
SstI	GAGCTC	2 cut(s)	1535, 1626
StyD4I	CCNGG	4 cut(s)	451, 1222, 1737, 1885
StyI	CCWWGG	3 cut(s)	134, 1784, 1851
TaaI	ACNGT	5 cut(s)	38, 52, 969, 1264, 2041
TaiI	ACGT	3 cut(s)	122, 888, 2120
TaqI	TCGA	8 cut(s)	567, 695, 806, 845, 900, 1529, 1620, 1733
TatI	WGTACW	2 cut(s)	632, 638
TauI	GCSGC	2 cut(s)	1426, 1673
TfiI	GAWTC	9 cut(s)	215, 290, 376, 407, 692, 953, 983, 2604, 2656
TscAI	CASTG	3 cut(s)	1069, 1267, 1915
TseFI	GTSAC	3 cut(s)	2107, 2268, 2362
TseI	GCWGC	5 cut(s)	530, 1059, 1773, 1793, 1796
Tsp45I	GTSAC	3 cut(s)	2107, 2268, 2362
TspGWI	ACGGA	3 cut(s)	51, 2095, 2412
TspRI	CASTG	3 cut(s)	1069, 1267, 1915
Van91I	CCANNNNNTGG	1 cut(s)	77
VneI	GTGCAC	1 cut(s)	2337
VpaK11BI	GGWCC	1 cut(s)	59
XagI	CCTNNNNNAGG	1 cut(s)	1314
XapI	RAATTY	6 cut(s)	155, 184, 2101, 2179, 2489, 2758
XceI	RCATGY	1 cut(s)	1598
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1148, 2131
XmiI	GTMKAC	2 cut(s)	557, 2151
XmnI	GAANNNNTTC	1 cut(s)	2101
ZrmI	AGTACT	2 cut(s)	634, 640
Zsp2I	ATGCAT	1 cut(s)	1113

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.