Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0002973

Physical Location & Seq

Genomic Coordinates Reverse (-)

50912640 .. 50918817

Gene Structure 6178 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0360900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGCGTGAAGCACTGTTGTGTGAATCCCCAAGCGACGTCGTGTTGTGTGCCAAGAAGAAGAGGTCAGAGGACGAGGACGCGCCGCCGCAGCTGGTGGTTGCCGCCCCGGCGCTCTCCATTGGCCGGAGCCGATCTCAGGCGGGGACTCGCCGCGTCACTCCGACGACGACGACCACGGAGGTGGCGGTGGTGCCGAGCATCGAGAGGTTTCTGCCGAACGGGGATCTCTACATCGGGAGCTTCGCCGGCTCGGTCCCGAACGGATCCGGTAAGTATCTGTGGACCGACGGGTGCATGTACGAGGGGGAGTGGCGGAAGGGCAAGGCCTCCGGGAAAGGGAAATTCTCGTGGCCGTCGGGCGCGACTTACGAGGGCGAATTCAAGTCGGGTCGGATGGAAGGGTACGGGACGTTTATCGGATCCGACGGCGACACGTACCGGGGGACGTGGTCGGCGGATCGGAAGCACGGGATGGGCCAGAAGCGCTACGCCAACGGCGATTTCTACGAAGGATCGTGGAAGAGGAACCTCCAGGACGGCCAGGGGAGGTACGTGTGGCAGAACGGCAACGAGTACGTCGGCGAGTGGAAGGCCGGAGTCATTTCGGGTCGGGGCGTTTTGATTTGGGCCAATGGGAACAAGTACGACGGCCAGTGGGAAAATGGAGTCCCCAAAGGCAACGGAATATTCACCTGGCCGGACGGCAGCTGCTACGTCGGTTGCTGGAACAAGGATTTGAAGATACAGCAGCTTAACGGCACGTTTTACCCGGCAAACGGCGGCAAGGAGCAGAACTTCGACAACATTGGGCCGTTCGCGGCGGAGAATTTGACGATAACGATGAGGAAGAGGTCGTCGGTGGACGGAGCTAGAGGGAGCCTGGCGGAGAGGTCGTTTCCGAGGATTTGTATTTGGGAGAGCGACGGTGAGGCTGGGGATATTACTTGTGATATTATTGATAATGTGGAGGCTTCTATGTTCTACCGGAACGGCACGTCTTTCGATCGGGATTCGTTTATGCAGTTCAAGAGGAATCCCTGTTGCTTTTCCGGCGAGCCCAAGAAACCTGGCCAGCCCATTTCCAAGGGGCATAAGAACTACGATTTGATGCTCAATCTTCAACTGGGTATAAGGTACTCTATTGGGAAGCATGCTTCCATAGTGCGGGACCTTAAATCCAGTGATTTCGATCCGAAGGAGAAGTTCTGGACCAGGTTTCCGCCGGAGGGATCCAGCAAAACGCCGCCTCATCAGTCGTTTGAGTTCAGGTGGAAGGACTACTGTCCTATGGTGTTCAGGCGTTTGAGGGAGTTATTCCAAGTAGATCCTGCAGATTATATGCTGGCTATTTGTGGAAATGATGCTCTTAGGGAGCTTTCTTCTCCAGGGAAAAGCGGCAGCTTCTTTTACTTGACTCAGGATGATAGATTCATGATTAAGACTGTCAAAAAATCAGAAGTCAAGGTGCTAATAAGGATGCTTCCAAGTTATTATAGGCATATGTCTCGGTATGAAAATTCTCTTGTCACTAAATTCTACGGGGTGCATTGTGTCAAACCTGTTGGGGGCCAGAAGACAAGGTTTATAGTGATGGGAAATTTGTTCTGCTCGGAGTATAGAATACATAGACGATTTGACCTGAAAGGATCTTCCCACGGTAGAACAACTGATAAGCCTGAGGGGGAGATTGATGAAATTACAACCCTGAAGGACCTTGATCTTAATTTTGTGTTTCGACTACAAGGAAAATGGTACCAGGAGCTTATGAAGCAAATTGATCTAGATTGTGAATTTTTGGAAGCAGAGAGAATCATGGATTATAGTCTTTTGGTTGGTCTTCATTTTTATGATGGCAATACGTATGACAAAATGGCGCTGTCACCTTTTCTCTTGCGCTCTGGCCAAAAGGATTCATTTCAGAATGAAAAGTTTATGCGCGGGTGTCGGTTTCTTGAAGCTGAGCTACAAGACATGGATCGAGTTTTGTCTGGCCGGAAGCCACGGATCTGCTTAGGAGCCAACATGCCTGCAAGGGCAGAGCGGATGGCTCGAAGGAGTGACTTCGATCAGTACACCCCTGGTGGGTTCAGTCATTTGACCCCTTCACGCAGCGGTGAAATCTATGATGTAGTTCTTTACTTCGGGATAATAGACATTTTACAAGACTATGATATCAGCAAGAAGTTAGAGCATGCATATAAATCCTTGCAAGTCGACCCGACTTCAATATCAGCTGTGGATCCCAAGCTTTACTCAAAGAGGTTCCGGGATTTCATTGGAAGAATTTTCATTGAAGACAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009247 GO:0009987 GO:0016020 GO:0019374 GO:0019375 GO:0019637 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046467 GO:0048046 GO:0071704 GO:0090407 GO:1901135 GO:1901137 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

LNS2 Lipin_N Lipin_mid

Protein Analysis

767

Amino Acids

87.31

Weight (kDa)

8.73

Isoelectric Point (pI)

39.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MORN	PF02493	100 - 121	3.4e-07	MORN repeat
MORN	PF02493	123 - 145	7.2e-06	MORN repeat
MORN	PF02493	169 - 190	6.8e-06	MORN repeat
MORN	PF02493	192 - 213	7.9e-06	MORN repeat
MORN	PF02493	215 - 236	5e-07	MORN repeat
PIP5K	PF01504	450 - 761	2.5e-102	Phosphatidylinositol-4-phosphate 5-Kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002973)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42870 AT5G42870
fragaria_vesca	FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540
malus_domestica	MD15G1030100.v1.1 MD15G1084000.v1.1
prunus_persica	Prupe.1G437400_v2.0.a1 Prupe.1G437400_v2.0.a1 Prupe.1G437400_v2.0.a1
pyrus_communis	pycom08g08400 pycom15g07920
rosa_chinensis	RchiOBHm_Chr6g0307611 RchiOBHm_Chr6g0307781
rosa_laevigata	RLG00000010701
rosa_multiflora	Rmu_sc0000031.1_g000031
rosa_roxburghii	Rroxscaffold_7G00160890
rosa_rugosa	Rorug06G0360900
rosa_samantha	Rh6AG469900 Rh6BG480400 Rh6CG486100 Rh6DG472500
rosa_wichuraiana	Rw6G041030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	39
Acc65I	GGTACC	1 cut(s)	1752
AccB1I	GGYRCC	2 cut(s)	190, 1752
AccBSI	CCGCTC	1 cut(s)	2041
AccI	GTMKAC	1 cut(s)	2214
AccII	CGCG	5 cut(s)	80, 153, 362, 818, 1938
AcoI	YGGCCR	8 cut(s)	121, 350, 538, 649, 695, 1069, 1900, 1990
AcsI	RAATTY	8 cut(s)	341, 377, 826, 1516, 1532, 1597, 1790, 2283
AcuI	CTGAAG	1 cut(s)	1727
AcyI	GRCGYC	1 cut(s)	36
AfaI	GTAC	9 cut(s)	299, 404, 437, 551, 575, 644, 1136, 1754, 2072
AfeI	AGCGCT	1 cut(s)	485
AfiI	CCNNNNNNNGG	8 cut(s)	123, 136, 336, 776, 1164, 1226, 1565, 2082
AflIII	ACRYGT	2 cut(s)	432, 552
AgsI	TTSAA	7 cut(s)	382, 739, 1027, 1121, 1955, 2226, 2294
AjiI	CACGTC	2 cut(s)	447, 996
AjnI	CCWGG	9 cut(s)	531, 540, 692, 879, 1066, 1211, 1384, 1755, 2077
AjuI	GAANNNNNNNTTGG	2 cut(s)	485, 517
AleI	CACNNNNGTG	2 cut(s)	16, 179
Alw26I	GTCTC	1 cut(s)	1509
Aor51HI	AGCGCT	1 cut(s)	485
ApeKI	GCWGC	6 cut(s)	88, 705, 708, 748, 1398, 2109
ApoI	RAATTY	8 cut(s)	341, 377, 826, 1516, 1532, 1597, 1790, 2283
Asp718I	GGTACC	1 cut(s)	1752
AspLEI	GCGC	7 cut(s)	82, 112, 362, 486, 1876, 1896, 1938
AspS9I	GGNCC	9 cut(s)	253, 282, 475, 627, 809, 1168, 1209, 1567, 1711
AsuC2I	CCSGG	5 cut(s)	107, 331, 440, 770, 2267
AsuHPI	GGTGA	4 cut(s)	682, 938, 1872, 2126
AvaII	GGWCC	5 cut(s)	253, 282, 1168, 1209, 1711
AxyI	CCTNAGG	1 cut(s)	1677
BalI	TGGCCA	2 cut(s)	1071, 1902
BamHI	GGATCC	4 cut(s)	263, 419, 1229, 2239
BanI	GGYRCC	2 cut(s)	190, 1752
BanII	GRGCYC	1 cut(s)	1059
BarI	GAAGNNNNNNTAC	2 cut(s)	1947, 1979
BauI	CACGAG	1 cut(s)	346
BbsI	GAAGAC	2 cut(s)	1580, 1829
BbvI	GCAGC	6 cut(s)	100, 695, 717, 760, 1410, 2121
BccI	CCATC	5 cut(s)	388, 466, 1585, 1844, 2038
BcgI	CGANNNNNNTGC	4 cut(s)	982, 1016, 1487, 1521
BciT130I	CCWGG	9 cut(s)	533, 542, 694, 881, 1068, 1213, 1386, 1757, 2079
BcnI	CCSGG	5 cut(s)	107, 331, 440, 770, 2267
BcoDI	GTCTC	1 cut(s)	1509
BfaI	CTAG	2 cut(s)	870, 1781
BfmI	CTRYAG	1 cut(s)	1329
BfoI	RGCGCY	3 cut(s)	113, 487, 1877
BglI	GCCNNNNNGGC	1 cut(s)	107
BlpI	GCTNAGC	1 cut(s)	1959
Bme18I	GGWCC	5 cut(s)	253, 282, 1168, 1209, 1711
BmgBI	CACGTC	2 cut(s)	447, 996
BmgT120I	GGNCC	9 cut(s)	253, 282, 475, 627, 809, 1168, 1209, 1567, 1711
BmrI	ACTGGG	1 cut(s)	1133
BmsI	GCATC	4 cut(s)	207, 1098, 1351, 1467
BmuI	ACTGGG	1 cut(s)	1133
BoxI	GACNNNNGTC	1 cut(s)	1281
BpiI	GAAGAC	2 cut(s)	1580, 1829
BplI	GAGNNNNNCTC	2 cut(s)	118, 150
BpmI	CTGGAG	2 cut(s)	515, 1368
Bpu10I	CCTNAGC	1 cut(s)	2011
Bpu1102I	GCTNAGC	1 cut(s)	1959
BpuMI	CCSGG	5 cut(s)	107, 331, 440, 770, 2267
BsaAI	YACGTR	3 cut(s)	435, 553, 1860
BsaBI	GATNNNNATC	1 cut(s)	1188
BsaHI	GRCGYC	1 cut(s)	36
BsaWI	WCCGGW	2 cut(s)	266, 984
BsaXI	ACNNNNNCTCC	2 cut(s)	878, 908
Bsc4I	CCNNNNNNNGG	8 cut(s)	123, 136, 336, 776, 1164, 1226, 1565, 2082
Bse118I	RCCGGY	1 cut(s)	245
Bse1I	ACTGG	3 cut(s)	652, 1128, 1179
Bse21I	CCTNAGG	1 cut(s)	1677
Bse8I	GATNNNNATC	1 cut(s)	1188
BseBI	CCWGG	9 cut(s)	533, 542, 694, 881, 1068, 1213, 1386, 1757, 2079
BseGI	GGATG	5 cut(s)	399, 477, 1426, 1482, 2049
BseJI	GATNNNNATC	1 cut(s)	1188
BseLI	CCNNNNNNNGG	8 cut(s)	123, 136, 336, 776, 1164, 1226, 1565, 2082
BseMII	CTCAG	4 cut(s)	149, 1430, 1668, 1950
BseNI	ACTGG	3 cut(s)	652, 1128, 1179
BseXI	GCAGC	6 cut(s)	100, 695, 717, 760, 1410, 2121
BseYI	CCCAGC	1 cut(s)	932
Bsh1236I	CGCG	5 cut(s)	80, 153, 362, 818, 1938
Bsh1285I	CGRYCG	1 cut(s)	1006
BshNI	GGYRCC	2 cut(s)	190, 1752
BsiEI	CGRYCG	1 cut(s)	1006
BslFI	GGGAC	6 cut(s)	157, 239, 421, 457, 653, 1181
BslI	CCNNNNNNNGG	8 cut(s)	123, 136, 336, 776, 1164, 1226, 1565, 2082
BsmAI	GTCTC	1 cut(s)	1509
BsmFI	GGGAC	6 cut(s)	157, 239, 421, 457, 653, 1181
Bsp1286I	GDGCHC	1 cut(s)	1059
Bsp1720I	GCTNAGC	1 cut(s)	1959
BspCNI	CTCAG	4 cut(s)	148, 1429, 1669, 1951
BspFNI	CGCG	5 cut(s)	80, 153, 362, 818, 1938
BspHI	TCATGA	1 cut(s)	1431
BspMAI	CTGCAG	1 cut(s)	1333
BspT107I	GGYRCC	2 cut(s)	190, 1752
BsrBI	CCGCTC	1 cut(s)	2041
BsrFI	RCCGGY	1 cut(s)	245
BsrI	ACTGG	3 cut(s)	652, 1128, 1179
BssAI	RCCGGY	1 cut(s)	245
BssNI	GRCGYC	1 cut(s)	36
BssSI	CACGAG	1 cut(s)	346
BssT1I	CCWWGG	1 cut(s)	1083
Bst2BI	CACGAG	1 cut(s)	346
Bst2UI	CCWGG	9 cut(s)	533, 542, 694, 881, 1068, 1213, 1386, 1757, 2079
Bst4CI	ACNGT	5 cut(s)	15, 926, 1283, 1444, 1658
Bst6I	CTCTTC	3 cut(s)	53, 515, 842
BstACI	GRCGYC	1 cut(s)	36
BstBAI	YACGTR	3 cut(s)	435, 553, 1860
BstC8I	GCNNGC	7 cut(s)	247, 1055, 1073, 1152, 1344, 2028, 2193
BstDEI	CTNAG	6 cut(s)	135, 1367, 1416, 1677, 1959, 2011
BstDSI	CCRYGG	3 cut(s)	174, 1654, 2000
BstF5I	GGATG	5 cut(s)	399, 477, 1426, 1482, 2049
BstFNI	CGCG	5 cut(s)	80, 153, 362, 818, 1938
BstH2I	RGCGCY	3 cut(s)	113, 487, 1877
BstHHI	GCGC	7 cut(s)	82, 112, 362, 486, 1876, 1896, 1938
BstMAI	GTCTC	1 cut(s)	1509
BstMCI	CGRYCG	1 cut(s)	1006
BstMWI	GCNNNNNNNGC	6 cut(s)	88, 107, 246, 483, 1050, 1768
BstNI	CCWGG	9 cut(s)	533, 542, 694, 881, 1068, 1213, 1386, 1757, 2079
BstNSI	RCATGY	4 cut(s)	298, 1154, 2026, 2195
BstPAI	GACNNNNGTC	1 cut(s)	1281
BstSFI	CTRYAG	1 cut(s)	1329
BstSNI	TACGTA	1 cut(s)	1860
BstUI	CGCG	5 cut(s)	80, 153, 362, 818, 1938
BstV1I	GCAGC	6 cut(s)	100, 695, 717, 760, 1410, 2121
BstV2I	GAAGAC	2 cut(s)	1580, 1829
BstX2I	RGATCY	8 cut(s)	223, 263, 419, 1229, 1324, 1646, 2004, 2239
BstXI	CCANNNNNNTGG	1 cut(s)	181
BstYI	RGATCY	8 cut(s)	223, 263, 419, 1229, 1324, 1646, 2004, 2239
Bsu36I	CCTNAGG	1 cut(s)	1677
BtgI	CCRYGG	3 cut(s)	174, 1654, 2000
BtrI	CACGTC	2 cut(s)	447, 996
BtsCI	GGATG	5 cut(s)	399, 477, 1426, 1482, 2049
BtsIMutI	CAGTG	3 cut(s)	11, 659, 1186
Cac8I	GCNNGC	7 cut(s)	247, 1055, 1073, 1152, 1344, 2028, 2193
CciI	TCATGA	1 cut(s)	1431
CfoI	GCGC	7 cut(s)	82, 112, 362, 486, 1876, 1896, 1938
Cfr10I	RCCGGY	1 cut(s)	245
Cfr13I	GGNCC	9 cut(s)	253, 282, 475, 627, 809, 1168, 1209, 1567, 1711
CseI	GACGC	2 cut(s)	86, 142
CsiI	ACCWGGT	1 cut(s)	1211
Csp6I	GTAC	9 cut(s)	298, 403, 436, 550, 574, 643, 1135, 1753, 2071
CviAII	CATG	7 cut(s)	295, 1151, 1432, 1813, 1972, 2023, 2192
CviQI	GTAC	9 cut(s)	298, 403, 436, 550, 574, 643, 1135, 1753, 2071
DdeI	CTNAG	6 cut(s)	135, 1367, 1416, 1677, 1959, 2011
EaeI	YGGCCR	8 cut(s)	121, 350, 538, 649, 695, 1069, 1900, 1990
Eam1104I	CTCTTC	3 cut(s)	53, 515, 842
EarI	CTCTTC	3 cut(s)	53, 515, 842
EciI	GGCGGA	5 cut(s)	328, 470, 836, 899, 1209
Eco105I	TACGTA	1 cut(s)	1860
Eco130I	CCWWGG	1 cut(s)	1083
Eco147I	AGGCCT	1 cut(s)	326
Eco24I	GRGCYC	1 cut(s)	1059
Eco32I	GATATC	1 cut(s)	2173
Eco47I	GGWCC	5 cut(s)	253, 282, 1168, 1209, 1711
Eco47III	AGCGCT	1 cut(s)	485
Eco57I	CTGAAG	1 cut(s)	1727
Eco81I	CCTNAGG	1 cut(s)	1677
EcoO109I	RGGNCCY	2 cut(s)	1168, 1711
EcoRI	GAATTC	1 cut(s)	377
EcoRII	CCWGG	9 cut(s)	531, 540, 692, 879, 1066, 1211, 1384, 1755, 2077
EcoRV	GATATC	1 cut(s)	2173
EcoT14I	CCWWGG	1 cut(s)	1083
EcoT22I	ATGCAT	1 cut(s)	2197
EcoT38I	GRGCYC	1 cut(s)	1059
ErhI	CCWWGG	1 cut(s)	1083
FaeI	CATG	7 cut(s)	298, 1154, 1435, 1816, 1975, 2026, 2195
FaqI	GGGAC	6 cut(s)	157, 239, 421, 457, 653, 1181
FatI	CATG	7 cut(s)	294, 1150, 1431, 1812, 1971, 2022, 2191
FauI	CCCGC	3 cut(s)	133, 1158, 1931
FauNDI	CATATG	1 cut(s)	1500
FblI	GTMKAC	1 cut(s)	2214
FokI	GGATG	5 cut(s)	406, 484, 1433, 1489, 2056
FriOI	GRGCYC	1 cut(s)	1059
FspBI	CTAG	2 cut(s)	870, 1781
GlaI	GCGC	7 cut(s)	81, 111, 361, 485, 1875, 1895, 1937
GsaI	CCCAGC	1 cut(s)	936
GsuI	CTGGAG	2 cut(s)	515, 1368
HaeII	RGCGCY	3 cut(s)	113, 487, 1877
HgaI	GACGC	2 cut(s)	86, 142
HhaI	GCGC	7 cut(s)	82, 112, 362, 486, 1876, 1896, 1938
Hin1I	GRCGYC	1 cut(s)	36
Hin1II	CATG	7 cut(s)	298, 1154, 1435, 1816, 1975, 2026, 2195
Hin6I	GCGC	7 cut(s)	80, 110, 360, 484, 1874, 1894, 1936
HinP1I	GCGC	7 cut(s)	80, 110, 360, 484, 1874, 1894, 1936
HincII	GTYRAC	1 cut(s)	2215
HindII	GTYRAC	1 cut(s)	2215
HindIII	AAGCTT	1 cut(s)	2246
HphI	GGTGA	4 cut(s)	682, 938, 1872, 2126
Hpy166II	GTNNAC	4 cut(s)	282, 862, 2073, 2215
Hpy8I	GTNNAC	4 cut(s)	282, 862, 2073, 2215
HpyAV	CCTTC	9 cut(s)	310, 392, 503, 583, 1189, 1267, 1702, 2046, 2112
HpyCH4III	ACNGT	5 cut(s)	15, 926, 1283, 1444, 1658
HpyCH4V	TGCA	7 cut(s)	294, 1021, 1331, 1546, 2030, 2195, 2209
HpyF10VI	GCNNNNNNNGC	6 cut(s)	88, 107, 246, 483, 1050, 1768
HpyF3I	CTNAG	6 cut(s)	135, 1367, 1416, 1677, 1959, 2011
Hsp92I	GRCGYC	1 cut(s)	36
Hsp92II	CATG	7 cut(s)	298, 1154, 1435, 1816, 1975, 2026, 2195
HspAI	GCGC	7 cut(s)	80, 110, 360, 484, 1874, 1894, 1936
KpnI	GGTACC	1 cut(s)	1756
KroI	GCCGGC	1 cut(s)	245
KroNI	GCCGGC	1 cut(s)	247
LmnI	GCTCC	8 cut(s)	126, 237, 787, 866, 876, 1372, 1759, 2015
Lsp1109I	GCAGC	6 cut(s)	100, 695, 717, 760, 1410, 2121
LweI	GCATC	4 cut(s)	207, 1098, 1351, 1467
MabI	ACCWGGT	1 cut(s)	1211
MaeI	CTAG	2 cut(s)	870, 1781
MaeIII	GTNAC	4 cut(s)	154, 1525, 1878, 2057
MbiI	CCGCTC	1 cut(s)	2041
MflI	RGATCY	8 cut(s)	223, 263, 419, 1229, 1324, 1646, 2004, 2239
MhlI	GDGCHC	1 cut(s)	1059
MlsI	TGGCCA	2 cut(s)	1071, 1902
MluNI	TGGCCA	2 cut(s)	1071, 1902
MlyI	GAGTC	4 cut(s)	139, 606, 675, 1408
MmeI	TCCRAC	3 cut(s)	185, 371, 447
Mox20I	TGGCCA	2 cut(s)	1071, 1902
Mph1103I	ATGCAT	1 cut(s)	2197
MroNI	GCCGGC	1 cut(s)	245
MscI	TGGCCA	2 cut(s)	1071, 1902
MseI	TTAA	4 cut(s)	753, 1173, 1437, 1722
MslI	CAYNNNNRTG	3 cut(s)	16, 179, 1845
Msp20I	TGGCCA	2 cut(s)	1071, 1902
MspA1I	CMGCKG	4 cut(s)	91, 708, 2112, 2234
MvaI	CCWGG	9 cut(s)	533, 542, 694, 881, 1068, 1213, 1386, 1757, 2079
MvnI	CGCG	5 cut(s)	80, 153, 362, 818, 1938
MwoI	GCNNNNNNNGC	6 cut(s)	88, 107, 246, 483, 1050, 1768
NaeI	GCCGGC	1 cut(s)	247
NciI	CCSGG	5 cut(s)	107, 331, 440, 770, 2267
NdeI	CATATG	1 cut(s)	1500
NgoMIV	GCCGGC	1 cut(s)	245
NlaIII	CATG	7 cut(s)	298, 1154, 1435, 1816, 1975, 2026, 2195
NmeAIII	GCCGAG	1 cut(s)	219
NmuCI	GTSAC	4 cut(s)	154, 1525, 1878, 2057
NsiI	ATGCAT	1 cut(s)	2197
NspI	RCATGY	4 cut(s)	298, 1154, 2026, 2195
OliI	CACNNNNGTG	2 cut(s)	16, 179
PaeI	GCATGC	2 cut(s)	1154, 2195
PagI	TCATGA	1 cut(s)	1431
PceI	AGGCCT	1 cut(s)	326
PcsI	WCGNNNNNNNCGW	1 cut(s)	495
PdiI	GCCGGC	1 cut(s)	247
PfeI	GAWTC	6 cut(s)	23, 1010, 1033, 1428, 1809, 1910
PflFI	GACNNNGTC	1 cut(s)	448
PfoI	TCCNGGA	3 cut(s)	329, 531, 2265
Ple19I	CGATCG	1 cut(s)	1006
PleI	GAGTC	4 cut(s)	139, 605, 674, 1408
PpsI	GAGTC	4 cut(s)	139, 605, 674, 1408
Ppu21I	YACGTR	3 cut(s)	435, 553, 1860
PpuMI	RGGWCCY	2 cut(s)	1168, 1711
PshAI	GACNNNNGTC	1 cut(s)	1281
Psp5II	RGGWCCY	2 cut(s)	1168, 1711
Psp6I	CCWGG	9 cut(s)	531, 540, 692, 879, 1066, 1211, 1384, 1755, 2077
PspFI	CCCAGC	1 cut(s)	932
PspGI	CCWGG	9 cut(s)	531, 540, 692, 879, 1066, 1211, 1384, 1755, 2077
PspPI	GGNCC	9 cut(s)	253, 282, 475, 627, 809, 1168, 1209, 1567, 1711
PspPPI	RGGWCCY	2 cut(s)	1168, 1711
PstI	CTGCAG	1 cut(s)	1333
PsuI	RGATCY	8 cut(s)	223, 263, 419, 1229, 1324, 1646, 2004, 2239
PsyI	GACNNNGTC	1 cut(s)	448
PvuI	CGATCG	1 cut(s)	1006
PvuII	CAGCTG	3 cut(s)	91, 708, 2234
RsaI	GTAC	9 cut(s)	299, 404, 437, 551, 575, 644, 1136, 1754, 2072
RsaNI	GTAC	9 cut(s)	298, 403, 436, 550, 574, 643, 1135, 1753, 2071
RseI	CAYNNNNRTG	3 cut(s)	16, 179, 1845
SalI	GTCGAC	1 cut(s)	2213
SaqAI	TTAA	4 cut(s)	753, 1173, 1437, 1722
Sau96I	GGNCC	9 cut(s)	253, 282, 475, 627, 809, 1168, 1209, 1567, 1711
SchI	GAGTC	4 cut(s)	139, 606, 675, 1408
SduI	GDGCHC	1 cut(s)	1059
SexAI	ACCWGGT	1 cut(s)	1211
SfaNI	GCATC	4 cut(s)	207, 1098, 1351, 1467
SfcI	CTRYAG	1 cut(s)	1329
SinI	GGWCC	5 cut(s)	253, 282, 1168, 1209, 1711
SmiMI	CAYNNNNRTG	3 cut(s)	16, 179, 1845
SnaBI	TACGTA	1 cut(s)	1860
SphI	GCATGC	2 cut(s)	1154, 2195
SseBI	AGGCCT	1 cut(s)	326
SspI	AATATT	1 cut(s)	687
SspMI	CTAG	2 cut(s)	870, 1781
StuI	AGGCCT	1 cut(s)	326
StyI	CCWWGG	1 cut(s)	1083
TaaI	ACNGT	5 cut(s)	15, 926, 1283, 1444, 1658
TaqI	TCGA	9 cut(s)	201, 798, 1002, 1188, 1735, 1978, 2050, 2064, 2214
TaqII	GACCGA	2 cut(s)	241, 299
TatI	WGTACW	1 cut(s)	2070
TauI	GCSGC	8 cut(s)	85, 88, 104, 153, 783, 821, 1246, 1398
TfiI	GAWTC	6 cut(s)	23, 1010, 1033, 1428, 1809, 1910
Tru1I	TTAA	4 cut(s)	753, 1173, 1437, 1722
Tru9I	TTAA	4 cut(s)	753, 1173, 1437, 1722
TscAI	CASTG	3 cut(s)	18, 659, 1186
TseFI	GTSAC	4 cut(s)	154, 1525, 1878, 2057
TseI	GCWGC	6 cut(s)	88, 705, 708, 748, 1398, 2109
Tsp45I	GTSAC	4 cut(s)	154, 1525, 1878, 2057
TspDTI	ATGAA	9 cut(s)	1420, 1527, 1707, 1781, 1829, 1902, 1938, 2263, 2278
TspGWI	ACGGA	5 cut(s)	191, 276, 696, 879, 2017
TspRI	CASTG	3 cut(s)	18, 659, 1186
Tth111I	GACNNNGTC	1 cut(s)	448
VpaK11BI	GGWCC	5 cut(s)	253, 282, 1168, 1209, 1711
XapI	RAATTY	8 cut(s)	341, 377, 826, 1516, 1532, 1597, 1790, 2283
XbaI	TCTAGA	1 cut(s)	1780
XceI	RCATGY	4 cut(s)	298, 1154, 2026, 2195
XcmI	CCANNNNNNNNNTGG	1 cut(s)	659
XmiI	GTMKAC	1 cut(s)	2214
XspI	CTAG	2 cut(s)	870, 1781
ZraI	GACGTC	1 cut(s)	37
Zsp2I	ATGCAT	1 cut(s)	2197

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.