Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002973

Physical Location & Seq

Genomic Coordinates Forward (+)

65897340 .. 65904334

Gene Structure 6995 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ27656

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3087 bp

ATGATTGAAGGGGAGGATGTACGCGGTTGGGAGGTTAGGGAGCTACATCTCGAGGGGGTATACACCGTCTCGGGGCCCTTTCACCCTTTTGGTGGAGCTGTGGATATTATTGTAGTTCAACAAGAAGATGGGAGCTTCAAGTCTTCGGCATGGAATGTCAGGTTTGGCAAGTTTCAAGGAGTTTTGAAGTCCAAGGAGAAGGTGGTGAACATTTGTGTAAATGGAGAGGAGGCTAGTTTCCACATGTATTTGGATAATAAAGGGGAGGCCTACTTCCTTAGGGAGGTTGATGCAAAAGAAGGGGAATCTGTGTTGTTTCCTTCCACGTCTTCCAGTGATGAGACGGATGAGCAATCTCGAGAAAAGAGGCAGCCAGTGAAGTCCAAAAGTTGCAAGTATGATGCTGAAAGTTTGATTGTTGATCACAATAATAAGTGCAATGGGAAGGTATTATCCAGGACAAATTCCCGGAAGTCGCGGATATTTGGGATATTTGGAAGCAGGTCAATGAAGGAGAGAATGACGGTCAACGAGGAGGCAGAGGGTGACAATAGCACGATTGGAAGGGTGGATTCTTTGGAGCGTGCAGAGTTTGCGGCCAACCTTTTGGAGGTGAAATGGTCCACTAGTCTTGCCACCAAGAAAAACAGGAAAGAGGGTGGTTCTCGTCTCTCTTGTCCTGATATTTTGGAGAGTGGAGTTGATGAAGATATGCAGATTAGTTCTGAGCACCGCCGGGTTTGCTCATCTCTACCTGATTGTGCTTTGCAGGAGGCGACTGCCTTCTGCAATTCCCAAATAGGCAATGATCCTCTGTCTCGCTTTGACAAAACACCTAGTTATGCGGAGGAAGCTAGTCTAATTTCATGTTTAAACACCCCGAATATAGTGTCTAGAGTATGCATAGAATTGGATGAGTCTGGGGCAACTGAAAATGATGGAAATGTAAAGGCACTCGTACCCAATATCACAGGTTCGGATCCTACAATTCCACACTCACTAGAGGTGGAAGCATTTCCATTTCCTGGAAAGCGTTTTGTTGGACAGGTTTTTGATGACAAAGGTGTTGTACTAGCTGGCTGTGGCATTTCCGAGAAGGGCGGTGGAATAGATAGAGTTGAATCCTTTATTTACTGTCAATCATCAGAGAGTGCAGTAGTGGGAACATATGGTTCCAGCGAACAAACTCATGAAAAACTTTACATTGCTAGAGGAGATTGTGGAAAAGTTCATGTTCATGCCGAAGCAGTACATGCCAGAACTGAACTGCTATCTAAGGAAGCAGTTACTGAGCAGTTTGTTGAAGATATTGCCTTAAAGGTGCAACCATTGGAGGCTCCTGAAACTTATTCTCACGAAACAGCTCATCATTCTTGCATAGGTAACCATAATGGGGACCTTGGAGGGCCAGCAAAAGATCCAGAGCACTGTAGTCAAATGGTCCATATTAATGCATTGCCTGATTCAGTTGAGATTGAATCACGTATCCTACCTAGGTTAAGCAATTCTGACCATCAAGTTCAAGATGAGAAAGAATTTAAAGGCGAAGATATCACATGTGATGTCCAAACCTCTCCGGGGAGATTAGAAGAAGAATTCCTTTTCAGTGACTCTGACGAACTCAACACCACTAAGGTTCAATGCACGGAGTCAAGTTCTTCACAATGTGTAGATGGAGAAATTAGTGTCTTGTATGGTCCAGATGGCAGTAAAGAATTTAATGGGTCAGCAGTCAGTACAAATTATGAATCATACTCATCTCCAGAAAAGTTTGCTCAAGAAATCCCCTCAACTGGTTTTGAGAAAGTTATAGGTAAACTGAAGGCAACATCAACTACAGTCGACATCCCCAGAAATCAAAAGGCTGCTGATAAGGAAGTTGGGATGCTGGTGGGATCATTGCCCAGTATGTGGCATCAGACTGACAATTTGAGTGCATTGGATCTTGATGCTCCTTTAAGCCATTCGCTGGACTCAAAAGCCAAAACCTTGAAGTGGATACAGCAAAATAGAGATGATTTGAGCTGTATAAAGTTGGACATAGAGCAACAGTTACCTCTGGTGAAGCTAGACGCTGAGAATGCTGAGGGTACAGAGGAGCTCAAAGATGTTCCCGGCAGTCCTGCACTAGGAGATCCATCAAAAGCTAGTGTTACCCCTAGTGGAAGCTGGAAACTCTGGCCTTTCCGTTTCAGGAGAACAAATTCCCAGAAGGCTATGCAACCAAATCTGAATGATTGTGGAAGTCCTGAAGTTGAGAATGCTTCAGAGAGCGTGGTTGGTGTGGATAGTAGTAACATTGTGCTTACACCAAAGGGGATGAAGAAAACAGAAAGGGCAACCTCTCCAACATCTGAGCAGTTGGCATCCTTAAATCTAAATGAAGGGAGAAATACAGTAACTTTCACATTTTCTACTGCAATGCTAGGAAAGCAGCAGGTTGATGCCAGAATTTATCTTTGGAAATGGAATACTCGTATAGTGATCTCAGATGTGGATGGGACAATCACAAAATCAGATGTTCTAGGTCAGTTCATGCCCTTGGTTGGTGTAGATTGGTCACAAACAGGTGTCACACATTTGTTTTCAGCCATTAAGGAAAATGGATATGAATTACTTTTTTTGAGTGCACGTGCCATTTCTCAGTCCTCTCAGACGCGACAATTTCTGTTTAACCTTAAGCAGGATGGGAAGGCTTTACCTGATGGGCCTGTTGTTATTTCTCCAGATGGACTTTTTCCTTCTCTTTTTCGGGAAGTTATCCGGAGGGCTCCTCATGAATTCAAGATTGCATGCTTAGAGGATATCAAATCACTGTTCCCTTCTGATTGCAACCCGTTCTATGCTGGTTTTGGAAACAGAGATACTGATGAATTCAGCTACCTTAAGGTTGGAATCCCCTTGGGTAAAATCTTCATCATTAATCCCAAGGGTGAGATTGTTGTGAACCGCCGTGTTGATGCAAAGACATATACCTCCCTTCATGCTCTCGTAAATGGCATGTTCCCCCCCACAACCTCCTCACACGAGCAGGAGGATTTTAATTCGTGGAATTTCTGGAAACTCCCACCACCTGATGTCAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009247 GO:0009987 GO:0016020 GO:0019374 GO:0019375 GO:0019637 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046467 GO:0048046 GO:0071704 GO:0090407 GO:1901135 GO:1901137 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

LNS2 Lipin_N Lipin_mid

Protein Analysis

1028

Amino Acids

113.12

Weight (kDa)

5.03

Isoelectric Point (pI)

42.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipin_N	PF04571	17 - 101	7.5e-28	lipin, N-terminal conserved region
LNS2	PF08235	781 - 1003	1.5e-94	LNS2 (Lipin/Ned1/Smp2)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002973)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42870 AT5G42870
fragaria_vesca	FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540
malus_domestica	MD15G1030100.v1.1 MD15G1084000.v1.1
prunus_persica	Prupe.1G437400_v2.0.a1 Prupe.1G437400_v2.0.a1 Prupe.1G437400_v2.0.a1
pyrus_communis	pycom08g08400 pycom15g07920
rosa_chinensis	RchiOBHm_Chr6g0307611 RchiOBHm_Chr6g0307781
rosa_laevigata	RLG00000010701
rosa_multiflora	Rmu_sc0000031.1_g000031
rosa_roxburghii	Rroxscaffold_7G00160890
rosa_rugosa	Rorug06G0360900
rosa_samantha	Rh6AG469900 Rh6BG480400 Rh6CG486100 Rh6DG472500
rosa_wichuraiana	Rw6G041030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	492, 2428
AccB7I	CCANNNNNTGG	3 cut(s)	1025, 1911, 1969
AccI	GTMKAC	2 cut(s)	60, 1842
AccII	CGCG	3 cut(s)	24, 478, 2659
AccIII	TCCGGA	1 cut(s)	2763
AciI	CCGC	7 cut(s)	24, 478, 596, 733, 845, 1101, 2950
AclWI	GGATC	7 cut(s)	803, 974, 987, 1412, 1903, 1950, 2129
AcoI	YGGCCR	1 cut(s)	597
AcsI	RAATTY	9 cut(s)	463, 1535, 1595, 1715, 2203, 2451, 2780, 2873, 3052
AcuI	CTGAAG	3 cut(s)	1841, 2250, 2271
AcvI	CACGTG	1 cut(s)	2633
AdeI	CACNNNGTG	1 cut(s)	1667
AfaI	GTAC	6 cut(s)	21, 960, 1071, 1251, 1738, 2092
AflII	CTTAAG	2 cut(s)	2678, 2885
AflIII	ACRYGT	2 cut(s)	243, 1556
AhlI	ACTAGT	1 cut(s)	626
AjiI	CACGTC	1 cut(s)	327
AjnI	CCWGG	2 cut(s)	455, 1024
AjuI	GAANNNNNNNTTGG	2 cut(s)	2443, 2475
Alw21I	GWGCWC	4 cut(s)	732, 1428, 2103, 2632
Alw26I	GTCTC	4 cut(s)	73, 335, 674, 822
Alw44I	GTGCAC	1 cut(s)	2628
AlwI	GGATC	7 cut(s)	803, 974, 987, 1412, 1903, 1950, 2129
AlwNI	CAGNNNCTG	1 cut(s)	1289
Ama87I	CYCGRG	3 cut(s)	50, 70, 357
Aor13HI	TCCGGA	1 cut(s)	2763
AoxI	GGCC	6 cut(s)	74, 267, 597, 1406, 2180, 2708
ApaI	GGGCCC	1 cut(s)	78
ApaLI	GTGCAC	1 cut(s)	2628
ApeKI	GCWGC	3 cut(s)	370, 1865, 2434
ApoI	RAATTY	9 cut(s)	463, 1535, 1595, 1715, 2203, 2451, 2780, 2873, 3052
ArsI	GACNNNNNNTTYG	4 cut(s)	875, 907, 1912, 1944
AseI	ATTAAT	2 cut(s)	1449, 2922
Asp700I	GAANNNNTTC	2 cut(s)	1014, 2203
AspA2I	CCTAGG	1 cut(s)	1493
AspS9I	GGNCC	8 cut(s)	74, 75, 621, 1396, 1406, 1441, 1697, 2708
AsuC2I	CCSGG	4 cut(s)	469, 737, 1578, 2115
AsuHPI	GGTGA	6 cut(s)	74, 217, 557, 625, 2074, 2945
AvaI	CYCGRG	3 cut(s)	50, 70, 357
AvaII	GGWCC	4 cut(s)	621, 1396, 1441, 1697
AvrII	CCTAGG	1 cut(s)	1493
AxyI	CCTNAGG	1 cut(s)	278
BaeGI	GKGCMC	2 cut(s)	78, 2632
BamHI	GGATCC	1 cut(s)	979
BanII	GRGCYC	3 cut(s)	78, 2103, 2773
BauI	CACGAG	1 cut(s)	3026
BbrPI	CACGTG	1 cut(s)	2633
BbsI	GAAGAC	2 cut(s)	135, 321
Bbv12I	GWGCWC	4 cut(s)	732, 1428, 2103, 2632
BbvCI	CCTCAGC	1 cut(s)	2085
BbvI	GCAGC	3 cut(s)	382, 1852, 2446
BceAI	ACGGC	1 cut(s)	2937
BciT130I	CCWGG	2 cut(s)	457, 1026
BciVI	GTATCC	2 cut(s)	1496, 1992
BclI	TGATCA	1 cut(s)	421
BcnI	CCSGG	4 cut(s)	469, 737, 1578, 2115
BcoDI	GTCTC	4 cut(s)	73, 335, 674, 822
BcuI	ACTAGT	1 cut(s)	626
BfmI	CTRYAG	2 cut(s)	1429, 1836
BfrI	CTTAAG	2 cut(s)	2678, 2885
BfuAI	ACCTGC	2 cut(s)	492, 2428
BfuI	GTATCC	2 cut(s)	1496, 1992
BisI	GCNGC	4 cut(s)	371, 597, 1866, 2435
BlnI	CCTAGG	1 cut(s)	1493
BlsI	GCNGC	4 cut(s)	372, 598, 1867, 2436
Bme1390I	CCNGG	6 cut(s)	457, 469, 737, 1026, 1578, 2115
Bme18I	GGWCC	4 cut(s)	621, 1396, 1441, 1697
BmeT110I	CYCGRG	3 cut(s)	50, 70, 357
BmgBI	CACGTC	1 cut(s)	327
BmgT120I	GGNCC	8 cut(s)	74, 75, 621, 1396, 1406, 1441, 1697, 2708
BmiI	GGNNCC	7 cut(s)	75, 76, 981, 1174, 1338, 1397, 2772
BmrFI	CCNGG	6 cut(s)	457, 469, 737, 1026, 1578, 2115
BmrI	ACTGGG	1 cut(s)	1899
BmsI	GCATC	8 cut(s)	280, 391, 1875, 1924, 1939, 2375, 2434, 2950
BmuI	ACTGGG	1 cut(s)	1899
BpiI	GAAGAC	2 cut(s)	135, 321
BplI	GAGNNNNNCTC	2 cut(s)	2758, 2790
BpmI	CTGGAG	2 cut(s)	1746, 2709
Bpu10I	CCTNAGC	1 cut(s)	2085
BpuEI	CTTGAG	1 cut(s)	1761
BpuMI	CCSGG	4 cut(s)	469, 737, 1578, 2115
BsaAI	YACGTR	2 cut(s)	1484, 2633
BsaJI	CCNNGG	7 cut(s)	192, 1399, 1493, 1577, 2541, 2901, 2928
BsaWI	WCCGGW	1 cut(s)	2763
Bse1I	ACTGG	4 cut(s)	333, 374, 1798, 1905
Bse21I	CCTNAGG	1 cut(s)	278
Bse3DI	GCAATG	6 cut(s)	445, 811, 1203, 1454, 1898, 2427
BseAI	TCCGGA	1 cut(s)	2763
BseBI	CCWGG	2 cut(s)	457, 1026
BseDI	CCNNGG	7 cut(s)	192, 1399, 1493, 1577, 2541, 2901, 2928
BseGI	GGATG	9 cut(s)	22, 352, 919, 1845, 1890, 2325, 2366, 2503, 2692
BseMI	GCAATG	6 cut(s)	445, 811, 1203, 1454, 1898, 2427
BseMII	CTCAG	8 cut(s)	717, 1281, 2067, 2076, 2346, 2502, 2657, 2666
BseNI	ACTGG	4 cut(s)	333, 374, 1798, 1905
BseRI	GAGGAG	6 cut(s)	242, 548, 1227, 2111, 2763, 3010
BseSI	GKGCMC	2 cut(s)	78, 2632
BseXI	GCAGC	3 cut(s)	382, 1852, 2446
BsgI	GTGCAG	3 cut(s)	606, 1173, 2109
Bsh1236I	CGCG	3 cut(s)	24, 478, 2659
BshFI	GGCC	6 cut(s)	76, 269, 599, 1408, 2182, 2710
BsiHKAI	GWGCWC	4 cut(s)	732, 1428, 2103, 2632
BsiHKCI	CYCGRG	3 cut(s)	50, 70, 357
BsiSI	CCGG	5 cut(s)	469, 736, 1577, 2115, 2764
BslFI	GGGAC	2 cut(s)	1409, 2515
BsmAI	GTCTC	4 cut(s)	73, 335, 674, 822
BsmBI	CGTCTC	3 cut(s)	73, 335, 674
BsmFI	GGGAC	2 cut(s)	1409, 2515
BsmI	GAATGC	2 cut(s)	2086, 2266
BsnI	GGCC	6 cut(s)	76, 269, 599, 1408, 2182, 2710
BsoBI	CYCGRG	3 cut(s)	50, 70, 357
Bsp120I	GGGCCC	1 cut(s)	74
Bsp1286I	GDGCHC	6 cut(s)	78, 732, 1428, 2103, 2632, 2773
Bsp13I	TCCGGA	1 cut(s)	2763
Bsp143I	GATC	8 cut(s)	421, 808, 979, 1417, 1895, 1942, 2134, 2484
BspACI	CCGC	7 cut(s)	24, 478, 596, 733, 845, 1101, 2950
BspANI	GGCC	6 cut(s)	76, 269, 599, 1408, 2182, 2710
BspCNI	CTCAG	8 cut(s)	718, 1282, 2068, 2077, 2347, 2501, 2656, 2665
BspEI	TCCGGA	1 cut(s)	2763
BspFNI	CGCG	3 cut(s)	24, 478, 2659
BspHI	TCATGA	2 cut(s)	1189, 2776
BspLI	GGNNCC	7 cut(s)	75, 76, 981, 1174, 1338, 1397, 2772
BspMI	ACCTGC	2 cut(s)	492, 2428
BspPI	GGATC	7 cut(s)	803, 974, 987, 1412, 1903, 1950, 2129
BspTI	CTTAAG	2 cut(s)	2678, 2885
BsrDI	GCAATG	6 cut(s)	445, 811, 1203, 1454, 1898, 2427
BsrI	ACTGG	4 cut(s)	333, 374, 1798, 1905
BssECI	CCNNGG	7 cut(s)	192, 1399, 1493, 1577, 2541, 2901, 2928
BssMI	GATC	8 cut(s)	421, 808, 979, 1417, 1895, 1942, 2134, 2484
BssNAI	GTATAC	1 cut(s)	61
BssSI	CACGAG	1 cut(s)	3026
BssT1I	CCWWGG	6 cut(s)	192, 1399, 1493, 2541, 2901, 2928
Bst1107I	GTATAC	1 cut(s)	61
Bst2BI	CACGAG	1 cut(s)	3026
Bst2UI	CCWGG	2 cut(s)	457, 1026
Bst4CI	ACNGT	8 cut(s)	67, 526, 1136, 1430, 1840, 2052, 2398, 2817
BstAFI	CTTAAG	2 cut(s)	2678, 2885
BstAPI	GCANNNNNTGC	2 cut(s)	593, 1253
BstBAI	YACGTR	2 cut(s)	1484, 2633
BstC8I	GCNNGC	4 cut(s)	585, 1078, 1410, 2794
BstEII	GGTNACC	1 cut(s)	1382
BstENI	CCTNNNNNAGG	4 cut(s)	281, 608, 2127, 2681
BstF5I	GGATG	9 cut(s)	22, 352, 919, 1845, 1890, 2325, 2366, 2503, 2692
BstFNI	CGCG	3 cut(s)	24, 478, 2659
BstKTI	GATC	8 cut(s)	424, 811, 982, 1420, 1898, 1945, 2137, 2487
BstMAI	GTCTC	4 cut(s)	73, 335, 674, 822
BstMBI	GATC	8 cut(s)	421, 808, 979, 1417, 1895, 1942, 2134, 2484
BstMWI	GCNNNNNNNGC	6 cut(s)	593, 741, 851, 1253, 2081, 2431
BstNI	CCWGG	2 cut(s)	457, 1026
BstNSI	RCATGY	5 cut(s)	247, 1256, 1560, 2796, 3004
BstPI	GGTNACC	1 cut(s)	1382
BstSCI	CCNGG	6 cut(s)	455, 467, 735, 1024, 1576, 2113
BstSFI	CTRYAG	2 cut(s)	1429, 1836
BstSLI	GKGCMC	2 cut(s)	78, 2632
BstUI	CGCG	3 cut(s)	24, 478, 2659
BstV1I	GCAGC	3 cut(s)	382, 1852, 2446
BstV2I	GAAGAC	2 cut(s)	135, 321
BstX2I	RGATCY	4 cut(s)	979, 1417, 1942, 2134
BstXI	CCANNNNNNTGG	1 cut(s)	607
BstYI	RGATCY	4 cut(s)	979, 1417, 1942, 2134
BstZ17I	GTATAC	1 cut(s)	61
Bsu36I	CCTNAGG	1 cut(s)	278
BsuI	GTATCC	2 cut(s)	1496, 1992
BsuRI	GGCC	6 cut(s)	76, 269, 599, 1408, 2182, 2710
BtrI	CACGTC	1 cut(s)	327
BtsCI	GGATG	9 cut(s)	22, 352, 919, 1845, 1890, 2325, 2366, 2503, 2692
BtsIMutI	CAGTG	5 cut(s)	340, 381, 1426, 1612, 2813
BveI	ACCTGC	2 cut(s)	492, 2428
Cac8I	GCNNGC	4 cut(s)	585, 1078, 1410, 2794
CaiI	CAGNNNCTG	1 cut(s)	1289
CciI	TCATGA	2 cut(s)	1189, 2776
Cfr13I	GGNCC	8 cut(s)	74, 75, 621, 1396, 1406, 1441, 1697, 2708
CseI	GACGC	2 cut(s)	2081, 2665
Csp6I	GTAC	6 cut(s)	20, 959, 1070, 1250, 1737, 2091
CspCI	CAANNNNNGTGG	2 cut(s)	613, 648
CviQI	GTAC	6 cut(s)	20, 959, 1070, 1250, 1737, 2091
DpnI	GATC	8 cut(s)	423, 810, 981, 1419, 1897, 1944, 2136, 2486
DpnII	GATC	8 cut(s)	421, 808, 979, 1417, 1895, 1942, 2134, 2484
DraI	TTTAAA	2 cut(s)	873, 1540
DraIII	CACNNNGTG	1 cut(s)	1667
EaeI	YGGCCR	1 cut(s)	597
Ecl136II	GAGCTC	1 cut(s)	2101
Eco130I	CCWWGG	6 cut(s)	192, 1399, 1493, 2541, 2901, 2928
Eco147I	AGGCCT	1 cut(s)	269
Eco24I	GRGCYC	3 cut(s)	78, 2103, 2773
Eco32I	GATATC	2 cut(s)	1552, 2806
Eco47I	GGWCC	4 cut(s)	621, 1396, 1441, 1697
Eco53kI	GAGCTC	1 cut(s)	2101
Eco57I	CTGAAG	3 cut(s)	1841, 2250, 2271
Eco72I	CACGTG	1 cut(s)	2633
Eco81I	CCTNAGG	1 cut(s)	278
Eco88I	CYCGRG	3 cut(s)	50, 70, 357
Eco91I	GGTNACC	1 cut(s)	1382
EcoICRI	GAGCTC	1 cut(s)	2101
EcoNI	CCTNNNNNAGG	4 cut(s)	281, 608, 2127, 2681
EcoO109I	RGGNCCY	3 cut(s)	74, 75, 1396
EcoO65I	GGTNACC	1 cut(s)	1382
EcoRI	GAATTC	3 cut(s)	1595, 2780, 2873
EcoRII	CCWGG	2 cut(s)	455, 1024
EcoRV	GATATC	2 cut(s)	1552, 2806
EcoT14I	CCWWGG	6 cut(s)	192, 1399, 1493, 2541, 2901, 2928
EcoT22I	ATGCAT	2 cut(s)	905, 1456
EcoT38I	GRGCYC	3 cut(s)	78, 2103, 2773
ErhI	CCWWGG	6 cut(s)	192, 1399, 1493, 2541, 2901, 2928
Esp3I	CGTCTC	3 cut(s)	73, 335, 674
FalI	AAGNNNNNCTT	2 cut(s)	1584, 1616
FaqI	GGGAC	2 cut(s)	1409, 2515
FauNDI	CATATG	1 cut(s)	1168
FbaI	TGATCA	1 cut(s)	421
FblI	GTMKAC	2 cut(s)	60, 1842
Fnu4HI	GCNGC	4 cut(s)	371, 597, 1866, 2435
FokI	GGATG	9 cut(s)	29, 359, 926, 1832, 1897, 2332, 2353, 2510, 2699
FriOI	GRGCYC	3 cut(s)	78, 2103, 2773
Fsp4HI	GCNGC	4 cut(s)	371, 597, 1866, 2435
GluI	GCNGC	4 cut(s)	371, 597, 1866, 2435
GsuI	CTGGAG	2 cut(s)	1746, 2709
HaeIII	GGCC	6 cut(s)	76, 269, 599, 1408, 2182, 2710
HapII	CCGG	5 cut(s)	469, 736, 1577, 2115, 2764
HgaI	GACGC	2 cut(s)	2081, 2665
HincII	GTYRAC	2 cut(s)	529, 1843
HindII	GTYRAC	2 cut(s)	529, 1843
HpaII	CCGG	5 cut(s)	469, 736, 1577, 2115, 2764
HphI	GGTGA	6 cut(s)	74, 217, 557, 625, 2074, 2945
Hpy166II	GTNNAC	8 cut(s)	61, 208, 529, 624, 1817, 1843, 2630, 2947
Hpy8I	GTNNAC	8 cut(s)	61, 208, 529, 624, 1817, 1843, 2630, 2947
HpyCH4III	ACNGT	8 cut(s)	67, 526, 1136, 1430, 1840, 2052, 2398, 2817
HpyCH4IV	ACGT	3 cut(s)	326, 1483, 2632
HpyF10VI	GCNNNNNNNGC	6 cut(s)	593, 741, 851, 1253, 2081, 2431
HpySE526I	ACGT	3 cut(s)	326, 1483, 2632
Kpn2I	TCCGGA	1 cut(s)	2763
Ksp22I	TGATCA	1 cut(s)	421
Kzo9I	GATC	8 cut(s)	421, 808, 979, 1417, 1895, 1942, 2134, 2484
LmnI	GCTCC	8 cut(s)	40, 95, 132, 580, 1342, 1957, 2098, 2776
Lsp1109I	GCAGC	3 cut(s)	382, 1852, 2446
LweI	GCATC	8 cut(s)	280, 391, 1875, 1924, 1939, 2375, 2434, 2950
MaeII	ACGT	3 cut(s)	326, 1483, 2632
MalI	GATC	8 cut(s)	423, 810, 981, 1419, 1897, 1944, 2136, 2486
MboI	GATC	8 cut(s)	421, 808, 979, 1417, 1895, 1942, 2134, 2484
MflI	RGATCY	4 cut(s)	979, 1417, 1942, 2134
MhlI	GDGCHC	6 cut(s)	78, 732, 1428, 2103, 2632, 2773
MlyI	GAGTC	4 cut(s)	926, 1604, 1658, 1967
MmeI	TCCRAC	4 cut(s)	1021, 2016, 2372, 2872
Mph1103I	ATGCAT	2 cut(s)	905, 1456
MroI	TCCGGA	1 cut(s)	2763
MroXI	GAANNNNTTC	2 cut(s)	1014, 2203
MslI	CAYNNNNRTG	2 cut(s)	1236, 1449
MspCI	CTTAAG	2 cut(s)	2678, 2885
MspI	CCGG	5 cut(s)	469, 736, 1577, 2115, 2764
MspR9I	CCNGG	6 cut(s)	457, 469, 737, 1026, 1578, 2115
MssI	GTTTAAAC	1 cut(s)	873
Mva1269I	GAATGC	2 cut(s)	2086, 2266
MvaI	CCWGG	2 cut(s)	457, 1026
MvnI	CGCG	3 cut(s)	24, 478, 2659
MwoI	GCNNNNNNNGC	6 cut(s)	593, 741, 851, 1253, 2081, 2431
NciI	CCSGG	4 cut(s)	469, 737, 1578, 2115
NdeI	CATATG	1 cut(s)	1168
NdeII	GATC	8 cut(s)	421, 808, 979, 1417, 1895, 1942, 2134, 2484
NlaIV	GGNNCC	7 cut(s)	75, 76, 981, 1174, 1338, 1397, 2772
NmuCI	GTSAC	4 cut(s)	545, 1607, 2559, 2572
NsiI	ATGCAT	2 cut(s)	905, 1456
NspI	RCATGY	5 cut(s)	247, 1256, 1560, 2796, 3004
PaeI	GCATGC	1 cut(s)	2796
PaeR7I	CTCGAG	2 cut(s)	50, 357
PagI	TCATGA	2 cut(s)	1189, 2776
PceI	AGGCCT	1 cut(s)	269
PciI	ACATGT	2 cut(s)	243, 1556
PctI	GAATGC	2 cut(s)	2086, 2266
PdmI	GAANNNNTTC	2 cut(s)	1014, 2203
PfeI	GAWTC	7 cut(s)	305, 572, 1121, 1463, 1478, 1748, 2895
PflMI	CCANNNNNTGG	3 cut(s)	1025, 1911, 1969
PfoI	TCCNGGA	3 cut(s)	455, 467, 1024
PkrI	GCNGC	4 cut(s)	372, 598, 1867, 2436
PleI	GAGTC	4 cut(s)	925, 1604, 1657, 1967
PmaCI	CACGTG	1 cut(s)	2633
PmeI	GTTTAAAC	1 cut(s)	873
PmlI	CACGTG	1 cut(s)	2633
PpsI	GAGTC	4 cut(s)	925, 1604, 1657, 1967
Ppu21I	YACGTR	2 cut(s)	1484, 2633
PpuMI	RGGWCCY	1 cut(s)	1396
PscI	ACATGT	2 cut(s)	243, 1556
PshBI	ATTAAT	2 cut(s)	1449, 2922
Psp124BI	GAGCTC	1 cut(s)	2103
Psp5II	RGGWCCY	1 cut(s)	1396
Psp6I	CCWGG	2 cut(s)	455, 1024
PspCI	CACGTG	1 cut(s)	2633
PspEI	GGTNACC	1 cut(s)	1382
PspGI	CCWGG	2 cut(s)	455, 1024
PspN4I	GGNNCC	7 cut(s)	75, 76, 981, 1174, 1338, 1397, 2772
PspOMI	GGGCCC	1 cut(s)	74
PspPI	GGNCC	8 cut(s)	74, 75, 621, 1396, 1406, 1441, 1697, 2708
PspPPI	RGGWCCY	1 cut(s)	1396
PstNI	CAGNNNCTG	1 cut(s)	1289
PsuI	RGATCY	4 cut(s)	979, 1417, 1942, 2134
RsaI	GTAC	6 cut(s)	21, 960, 1071, 1251, 1738, 2092
RsaNI	GTAC	6 cut(s)	20, 959, 1070, 1250, 1737, 2091
RseI	CAYNNNNRTG	2 cut(s)	1236, 1449
SacI	GAGCTC	1 cut(s)	2103
SalI	GTCGAC	1 cut(s)	1841
SatI	GCNGC	4 cut(s)	371, 597, 1866, 2435
Sau3AI	GATC	8 cut(s)	421, 808, 979, 1417, 1895, 1942, 2134, 2484
Sau96I	GGNCC	8 cut(s)	74, 75, 621, 1396, 1406, 1441, 1697, 2708
SchI	GAGTC	4 cut(s)	926, 1604, 1658, 1967
ScrFI	CCNGG	6 cut(s)	457, 469, 737, 1026, 1578, 2115
SduI	GDGCHC	6 cut(s)	78, 732, 1428, 2103, 2632, 2773
SfaNI	GCATC	8 cut(s)	280, 391, 1875, 1924, 1939, 2375, 2434, 2950
SfcI	CTRYAG	2 cut(s)	1429, 1836
Sfr274I	CTCGAG	2 cut(s)	50, 357
SinI	GGWCC	4 cut(s)	621, 1396, 1441, 1697
SlaI	CTCGAG	2 cut(s)	50, 357
SmiMI	CAYNNNNRTG	2 cut(s)	1236, 1449
SmlI	CTYRAG	5 cut(s)	50, 357, 1776, 2678, 2885
SmoI	CTYRAG	5 cut(s)	50, 357, 1776, 2678, 2885
SpeI	ACTAGT	1 cut(s)	626
SphI	GCATGC	1 cut(s)	2796
SseBI	AGGCCT	1 cut(s)	269
SsiI	CCGC	7 cut(s)	24, 478, 596, 733, 845, 1101, 2950
SstI	GAGCTC	1 cut(s)	2103
StuI	AGGCCT	1 cut(s)	269
StyD4I	CCNGG	6 cut(s)	455, 467, 735, 1024, 1576, 2113
StyI	CCWWGG	6 cut(s)	192, 1399, 1493, 2541, 2901, 2928
TaaI	ACNGT	8 cut(s)	67, 526, 1136, 1430, 1840, 2052, 2398, 2817
TaiI	ACGT	3 cut(s)	329, 1486, 2635
TaqI	TCGA	3 cut(s)	51, 358, 1842
TatI	WGTACW	3 cut(s)	1069, 1249, 1736
TauI	GCSGC	1 cut(s)	599
TfiI	GAWTC	7 cut(s)	305, 572, 1121, 1463, 1478, 1748, 2895
TscAI	CASTG	5 cut(s)	340, 381, 1433, 1612, 2820
TseFI	GTSAC	4 cut(s)	545, 1607, 2559, 2572
TseI	GCWGC	3 cut(s)	370, 1865, 2434
Tsp45I	GTSAC	4 cut(s)	545, 1607, 2559, 2572
TspGWI	ACGGA	3 cut(s)	359, 1661, 2177
TspRI	CASTG	5 cut(s)	340, 381, 1433, 1612, 2820
Van91I	CCANNNNNTGG	3 cut(s)	1025, 1911, 1969
Vha464I	CTTAAG	2 cut(s)	2678, 2885
VneI	GTGCAC	1 cut(s)	2628
VpaK11BI	GGWCC	4 cut(s)	621, 1396, 1441, 1697
VspI	ATTAAT	2 cut(s)	1449, 2922
XagI	CCTNNNNNAGG	4 cut(s)	281, 608, 2127, 2681
XapI	RAATTY	9 cut(s)	463, 1535, 1595, 1715, 2203, 2451, 2780, 2873, 3052
XbaI	TCTAGA	1 cut(s)	893
XceI	RCATGY	5 cut(s)	247, 1256, 1560, 2796, 3004
XcmI	CCANNNNNNNNNTGG	1 cut(s)	199
XhoI	CTCGAG	2 cut(s)	50, 357
XmaJI	CCTAGG	1 cut(s)	1493
XmiI	GTMKAC	2 cut(s)	60, 1842
XmnI	GAANNNNTTC	2 cut(s)	1014, 2203
Zsp2I	ATGCAT	2 cut(s)	905, 1456

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.