Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0002973

Physical Location & Seq

Genomic Coordinates Reverse (-)

25631251 .. 25638501

Gene Structure 7251 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g34540.t7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3144 bp

ATGTATGCGGTTGGGAGGTTAGGGAGTTACATCTCGAGGGGGGTATACAACGTCTCGGGGCCTTTTCACCCTTTTGGTGGAGCTGTGGATATTATAGTAGTTCAACAAGAAGATGGGAGCTCCAAGTCTTCGGCATGGAATGTTCGGTTTGGGAAATTTCAAGGGGTTTTGAAGTCCAAGGAGAAGGTGGTGAACATTTGTGTAAATGGAGAGGAAGCTAGTTTCCACATGTATTTGGATAATAAAGGGGAGGCTTACTTCCTTAGGGAGGTTGATGCAAAGGAAGGGGAATCTGTGTTGTTTCCTTCCTCGTCTTCCAGTGATGAGACGGATGAGCAATCTCGAGAAAAGAGGCAGCCATTGAAGTCCAAAAGTTGCAATTATGATGCTGAAAGTTTGATTGTTGATCAGAAAGATAAGTGCAATGGGAAGGTAATGTCCAGGACTAATTCCCGGAAGTCACGGATATTTGGGATATTTGGAAGCAGGTCAATGAAAGAGAGAATGATGGTTAAAGAGGAGGCAGAGGGTGATGATAGCACAGTTCGAAGGGCGGATTCTTTGGAGCGTGCTGAGTTTGCAGCCAACCTTTTGGAGGTGAAATGGTCCACTAGTCTTGCCACCAAGAAAGCTAGGAAAGAGGGTAGTTCTCGTCTTTCTTGTCCTGATATATTGGAGAGTGGAGTCGATGAAGATATGCAGATTAGTTCCGAGCACCGCCGAGTGTGCTCATCTCTACCTGATTGTGCTTTGCGGGGGGCGACCGCCTTCTGCAATGCCCAGATAGGCAATGCTCCTCTGTCTGGCTTTGACAAATCACCTAGTTATGTGGAGGAAGCTAGTCTAATTTCATGTTTAAACTCCTCGGGTATAGTGTCTAGAGTATGCAGAGAATTGGATGAGTCTGGAGTAACTGAAAATGATGGCAATGTGAAGGTGCTTGTATCCAATATCACAGGTTCGGGTGGTTCAAGTCCACACTCAGTAGAGGGGGAAGCATTTCCTGGCAAGCATTTTGTTGGACAGGTTAGTGATGACAAAGGTGTTGTACGAGCTGGCTGTGGCGTTTCCCAGAAGGATGTTAAAATAGATAAAGATAAATCCTTTATATACTGTGAATCATCAGAGAGCTCAGTAGTGGGAATAGATGGTTCCAGCAAACAAACTCATGAAAAGCTTTACATTACTAGAGGAGACAGTGGAAGCATTCATGTTCACGCCAAAGCAGTTCATGCCAGAACTGAACTGCTCTCTAAGGATGCAGTTACTGAGCAGTTTGTTGAAGATATTGCCTTAAAGGTGCAACCATTGGAGACTCCTGAAACAGATCGTCATTCTTGCACGGGTAACCGTAATGGGGACCTTAGGGAGCCAGATAAAGCTGCAGAGGACTGTAGTCAAATGGTCCATAATAGTGCATTGCCCGATTCAGTTGAGATTGAGTCACATATCCTTTCTAGGTTAAGCAACTCTGACCGTAAACTTCATGATAAGAAAGAATTTAAAGGTGAAGATATCTCATGTGAAGTCCAAACATCTTCTGGGTACATTAGTGGTTCTGAAATCACTGAAGCCGCAAGTGTGGTGCCACTGGCAAGACTAGAAGAAGAACAATTTCTTTTCAGTGACTCTGATGAACTCAACACCACTAAGGTTCAATGCGCAGAGTCAACTTCTTCACATTGTGTAGATGGAGAAATTAGTGTCTTGTGTAGTCCGGATGGCAGTAAAGAATTGAGTGGGTCAGCAGTCAGTACAAGTTATGAGTCATCTTCATCTCCAGAAAAGTGTACTCAAGAAATCCCCTCAACTGGTTTTGAGAAAGTTATCGGAAAACTTAACGCAGCATCAACTACAGTCGACATCCCTAGAAATCATAGGGCTGCTGATAAGGAAGTTGGGAGGCTGGTGGAATCATTGCCCATTATGTGGCATCAGGCCGATAATTTGAGTGCACTGGATCTTGATTGTCCTTTGAGCCATTCGCTGGACTCAGAAGCTAAAACCTTGAAGTGGATACAGCAAAATAGAGATGATCTGAGCTGTGTAAAGTTGGACAAAGATCAACAGTCACCTCTGGTAAAGCTAGACACTGAGAATGCTGAGGATACAGCGGAGCTAGCGGAGCTCAAAGATGTTCCCGGCAGTCCTGCACTAGGAGATCCCTCAGAGGCAAGTGTTACCCCTAGTGGAAGATGGAAACTCTGGCCTTTCCGTTTCAGGAGAACAAATTCCCAGAAGGCTCTGCAACCAAATCCAAATTCCCAGAAGGCTCTGCAACCAAATCTGAATGATTGTGGAAGTCCTGAAGTTGAGAATGCTGCAGAAAGCGCGGTTGGTGTGGATAGTATTGACTCTGTGCGTACACCAAAGGGGATGAAGAAAACAGAAAGGGCAACCTCTCCAACATCTGAGCAGTTGGCATCCTTAAATCTAAATGAAGGGAGGAATACAGTAACGTTCACGTTCTCTACTGCAATGCTAGGAAATCAGCAGGTTGATGCCAGAATTTATCTTTGGAAATGGAATACCCGTATAGTGATCTCAGATGTGGATGGGACAATCACAAAATCAGACGTTCTAGGTCAGTTCATGCCCTTGGTTGGTGTAGATTGGTCACAAACAGGTGTCACACATTTGTTTTCAGCCATTAAGGAAAATGGATATGAATTACTTTTTTTGAGTGCACGTGCTATTTCTCAGTCCTCTCAGACGCGACAATTTCTGTTTAACCTTAAGCAGGATGGGAAGGCTTTACCTGATGGGCCTGTTGTTATTTCTCCTGATGGACTTTTTCCTTCTCTTTTTCGGGAAGTTATTCGGAGGGCTCCTCATGAATTCAAGATTGCATGCTTAGAGGATATCAAATCGTTGTTCCCTCCTGATTGCAACCCGTTCTATGCTGGTTTTGGAAACAGAGACACTGATGAGTTCAGCTACCTCAAGGTTGGAATCCCCTTGGGTAAAATCTTCATCATTAATCCCAAGGGTGAGATTGTTGTGAACCGCCGTGTTGACGCAAAGACATATACTTCACTTCATGCTCTTGTAAATGACATGTTTCCCCCTACAACCTCCTCAAATGAGCAGGAGGACTTTAATTCGTGGAATTTCTGGAGACTCCCACCACCTGATGTCAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009247 GO:0009987 GO:0016020 GO:0019374 GO:0019375 GO:0019637 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046467 GO:0048046 GO:0071704 GO:0090407 GO:1901135 GO:1901137 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

LNS2 Lipin_N Lipin_mid

Protein Analysis

1048

Amino Acids

114.68

Weight (kDa)

5.18

Isoelectric Point (pI)

43.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipin_N	PF04571	12 - 95	4.5e-27	lipin, N-terminal conserved region
LNS2	PF08235	800 - 1022	1.3e-94	LNS2 (Lipin/Ned1/Smp2)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002973)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42870 AT5G42870
fragaria_vesca	FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540 FvH4_2g34540
malus_domestica	MD15G1030100.v1.1 MD15G1084000.v1.1
prunus_persica	Prupe.1G437400_v2.0.a1 Prupe.1G437400_v2.0.a1 Prupe.1G437400_v2.0.a1
pyrus_communis	pycom08g08400 pycom15g07920
rosa_chinensis	RchiOBHm_Chr6g0307611 RchiOBHm_Chr6g0307781
rosa_laevigata	RLG00000010701
rosa_multiflora	Rmu_sc0000031.1_g000031
rosa_roxburghii	Rroxscaffold_7G00160890
rosa_rugosa	Rorug06G0360900
rosa_samantha	Rh6AG469900 Rh6BG480400 Rh6CG486100 Rh6DG472500
rosa_wichuraiana	Rw6G041030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1663
Acc36I	ACCTGC	2 cut(s)	477, 2485
AccB1I	GGYRCC	1 cut(s)	1585
AccB7I	CCANNNNNTGG	2 cut(s)	1929, 1987
AccI	GTMKAC	2 cut(s)	45, 1860
AccII	CGCG	2 cut(s)	2333, 2716
AccIII	TCCGGA	1 cut(s)	1717
AclI	AACGTT	1 cut(s)	2459
AclWI	GGATC	2 cut(s)	1968, 2156
AcsI	RAATTY	7 cut(s)	155, 1499, 2230, 2260, 2508, 2837, 3109
AcuI	CTGAAG	2 cut(s)	1590, 2328
AcvI	CACGTG	1 cut(s)	2690
AdeI	CACNNNGTG	1 cut(s)	1685
AfaI	GTAC	5 cut(s)	1050, 1547, 1756, 1792, 2365
AflII	CTTAAG	1 cut(s)	2735
AflIII	ACRYGT	2 cut(s)	228, 3057
AgsI	TTSAA	9 cut(s)	104, 161, 172, 364, 972, 1283, 1658, 2011, 2842
AhlI	ACTAGT	1 cut(s)	611
AjnI	CCWGG	2 cut(s)	440, 1003
AjuI	GAANNNNNNNTTGG	6 cut(s)	2245, 2277, 2319, 2351, 2500, 2532
Alw21I	GWGCWC	7 cut(s)	122, 717, 731, 1133, 1957, 2130, 2689
Alw26I	GTCTC	6 cut(s)	58, 320, 1188, 1307, 2913, 3112
Alw44I	GTGCAC	2 cut(s)	1953, 2685
AlwI	GGATC	2 cut(s)	1968, 2156
AlwNI	CAGNNNCTG	1 cut(s)	1268
Ama87I	CYCGRG	4 cut(s)	34, 55, 342, 865
Aor13HI	TCCGGA	1 cut(s)	1717
AoxI	GGCC	4 cut(s)	59, 1938, 2207, 2765
ApaLI	GTGCAC	2 cut(s)	1953, 2685
ApeKI	GCWGC	6 cut(s)	355, 581, 1382, 1844, 1883, 2321
ApoI	RAATTY	7 cut(s)	155, 1499, 2230, 2260, 2508, 2837, 3109
AseI	ATTAAT	1 cut(s)	2979
Asp700I	GAANNNNTTC	4 cut(s)	999, 1614, 2230, 2817
AspLEI	GCGC	2 cut(s)	1664, 2333
AspS9I	GGNCC	5 cut(s)	59, 606, 1360, 1405, 2765
AsuC2I	CCSGG	2 cut(s)	454, 2142
AsuHPI	GGTGA	8 cut(s)	59, 202, 542, 610, 810, 1520, 2064, 3002
AsuII	TTCGAA	1 cut(s)	547
AsuNHI	GCTAGC	1 cut(s)	2119
AvaI	CYCGRG	4 cut(s)	34, 55, 342, 865
AvaII	GGWCC	3 cut(s)	606, 1360, 1405
AxyI	CCTNAGG	2 cut(s)	263, 1364
BaeGI	GKGCMC	2 cut(s)	1957, 2689
BaeI	ACNNNNGTAYC	2 cut(s)	1537, 1570
BanI	GGYRCC	1 cut(s)	1585
BanII	GRGCYC	4 cut(s)	122, 1133, 2130, 2830
BbrPI	CACGTG	1 cut(s)	2690
BbsI	GAAGAC	2 cut(s)	120, 306
Bbv12I	GWGCWC	7 cut(s)	122, 717, 731, 1133, 1957, 2130, 2689
BbvCI	CCTCAGC	1 cut(s)	2103
BbvI	GCAGC	6 cut(s)	367, 593, 1369, 1856, 1870, 2308
BceAI	ACGGC	1 cut(s)	2994
BciT130I	CCWGG	2 cut(s)	442, 1005
BciVI	GTATCC	3 cut(s)	955, 2010, 2101
BclI	TGATCA	1 cut(s)	406
BcnI	CCSGG	2 cut(s)	454, 2142
BcoDI	GTCTC	6 cut(s)	58, 320, 1188, 1307, 2913, 3112
BcuI	ACTAGT	1 cut(s)	611
BfmI	CTRYAG	4 cut(s)	1383, 1393, 1854, 2322
BfrI	CTTAAG	1 cut(s)	2735
BfuAI	ACCTGC	2 cut(s)	477, 2485
BfuI	GTATCC	3 cut(s)	955, 2010, 2101
BisI	GCNGC	7 cut(s)	356, 582, 1383, 1575, 1845, 1884, 2322
BlsI	GCNGC	7 cut(s)	357, 583, 1384, 1576, 1846, 1885, 2323
Bme1390I	CCNGG	4 cut(s)	442, 454, 1005, 2142
Bme18I	GGWCC	3 cut(s)	606, 1360, 1405
BmeT110I	CYCGRG	4 cut(s)	34, 55, 342, 865
BmgT120I	GGNCC	5 cut(s)	59, 606, 1360, 1405, 2765
BmiI	GGNNCC	6 cut(s)	60, 1153, 1361, 1371, 1587, 2829
BmrFI	CCNGG	4 cut(s)	442, 454, 1005, 2142
BmsI	GCATC	7 cut(s)	265, 376, 1249, 1856, 1942, 2432, 2491
BmtI	GCTAGC	1 cut(s)	2123
BoxI	GACNNNNGTC	1 cut(s)	1395
BpiI	GAAGAC	2 cut(s)	120, 306
BplI	GAGNNNNNCTC	2 cut(s)	2815, 2847
BpmI	CTGGAG	3 cut(s)	927, 1764, 3136
Bpu10I	CCTNAGC	1 cut(s)	2103
Bpu14I	TTCGAA	1 cut(s)	547
BpuEI	CTTGAG	2 cut(s)	1779, 2927
BpuMI	CCSGG	2 cut(s)	454, 2142
BsaAI	YACGTR	1 cut(s)	2690
BsaJI	CCNNGG	5 cut(s)	177, 864, 2598, 2958, 2985
BsaWI	WCCGGW	1 cut(s)	1717
Bse1I	ACTGG	4 cut(s)	318, 1596, 1816, 1962
Bse21I	CCTNAGG	2 cut(s)	263, 1364
Bse3DI	GCAATG	7 cut(s)	430, 781, 796, 934, 1418, 1916, 2484
BseAI	TCCGGA	1 cut(s)	1717
BseBI	CCWGG	2 cut(s)	442, 1005
BseDI	CCNNGG	5 cut(s)	177, 864, 2598, 2958, 2985
BseMI	GCAATG	7 cut(s)	430, 781, 796, 934, 1418, 1916, 2484
BseNI	ACTGG	4 cut(s)	318, 1596, 1816, 1962
BseRI	GAGGAG	6 cut(s)	533, 786, 853, 1206, 2820, 3067
BseSI	GKGCMC	2 cut(s)	1957, 2689
BseXI	GCAGC	6 cut(s)	367, 593, 1369, 1856, 1870, 2308
BsgI	GTGCAG	1 cut(s)	2136
Bsh1236I	CGCG	2 cut(s)	2333, 2716
Bsh1285I	CGRYCG	1 cut(s)	765
BshFI	GGCC	4 cut(s)	61, 1940, 2209, 2767
BshNI	GGYRCC	1 cut(s)	1585
BsiEI	CGRYCG	1 cut(s)	765
BsiHKAI	GWGCWC	7 cut(s)	122, 717, 731, 1133, 1957, 2130, 2689
BsiHKCI	CYCGRG	4 cut(s)	34, 55, 342, 865
BsiSI	CCGG	3 cut(s)	454, 1718, 2142
BslFI	GGGAC	2 cut(s)	1373, 2572
BsmAI	GTCTC	6 cut(s)	58, 320, 1188, 1307, 2913, 3112
BsmBI	CGTCTC	2 cut(s)	58, 320
BsmFI	GGGAC	2 cut(s)	1373, 2572
BsmI	GAATGC	3 cut(s)	1206, 2104, 2323
BsnI	GGCC	4 cut(s)	61, 1940, 2209, 2767
BsoBI	CYCGRG	4 cut(s)	34, 55, 342, 865
Bsp119I	TTCGAA	1 cut(s)	547
Bsp1286I	GDGCHC	8 cut(s)	122, 717, 731, 1133, 1957, 2130, 2689, 2830
Bsp13I	TCCGGA	1 cut(s)	1717
Bsp143I	GATC	7 cut(s)	406, 1327, 1960, 2035, 2062, 2161, 2541
BspANI	GGCC	4 cut(s)	61, 1940, 2209, 2767
BspEI	TCCGGA	1 cut(s)	1717
BspFNI	CGCG	2 cut(s)	2333, 2716
BspHI	TCATGA	3 cut(s)	1168, 1486, 2833
BspLI	GGNNCC	6 cut(s)	60, 1153, 1361, 1371, 1587, 2829
BspMAI	CTGCAG	2 cut(s)	1387, 2326
BspMI	ACCTGC	2 cut(s)	477, 2485
BspOI	GCTAGC	1 cut(s)	2123
BspPI	GGATC	2 cut(s)	1968, 2156
BspT104I	TTCGAA	1 cut(s)	547
BspT107I	GGYRCC	1 cut(s)	1585
BspTI	CTTAAG	1 cut(s)	2735
BsrDI	GCAATG	7 cut(s)	430, 781, 796, 934, 1418, 1916, 2484
BsrI	ACTGG	4 cut(s)	318, 1596, 1816, 1962
BssECI	CCNNGG	5 cut(s)	177, 864, 2598, 2958, 2985
BssMI	GATC	7 cut(s)	406, 1327, 1960, 2035, 2062, 2161, 2541
BssNAI	GTATAC	1 cut(s)	46
BssT1I	CCWWGG	4 cut(s)	177, 2598, 2958, 2985
Bst1107I	GTATAC	1 cut(s)	46
Bst2UI	CCWGG	2 cut(s)	442, 1005
Bst4CI	ACNGT	9 cut(s)	544, 1115, 1199, 1352, 1394, 1478, 1858, 2070, 2455
BstAFI	CTTAAG	1 cut(s)	2735
BstAPI	GCANNNNNTGC	1 cut(s)	1232
BstBAI	YACGTR	1 cut(s)	2690
BstBI	TTCGAA	1 cut(s)	547
BstC8I	GCNNGC	5 cut(s)	570, 1010, 1057, 2121, 2851
BstEII	GGTNACC	1 cut(s)	1346
BstENI	CCTNNNNNAGG	4 cut(s)	266, 593, 2154, 2738
BstFNI	CGCG	2 cut(s)	2333, 2716
BstHHI	GCGC	2 cut(s)	1664, 2333
BstKTI	GATC	7 cut(s)	409, 1330, 1963, 2038, 2065, 2164, 2544
BstMAI	GTCTC	6 cut(s)	58, 320, 1188, 1307, 2913, 3112
BstMBI	GATC	7 cut(s)	406, 1327, 1960, 2035, 2062, 2161, 2541
BstMCI	CGRYCG	1 cut(s)	765
BstMWI	GCNNNNNNNGC	6 cut(s)	578, 726, 1232, 2120, 2125, 2330
BstNI	CCWGG	2 cut(s)	442, 1005
BstNSI	RCATGY	3 cut(s)	232, 2853, 3061
BstPAI	GACNNNNGTC	1 cut(s)	1395
BstPI	GGTNACC	1 cut(s)	1346
BstSCI	CCNGG	4 cut(s)	440, 452, 1003, 2140
BstSFI	CTRYAG	4 cut(s)	1383, 1393, 1854, 2322
BstSLI	GKGCMC	2 cut(s)	1957, 2689
BstUI	CGCG	2 cut(s)	2333, 2716
BstV1I	GCAGC	6 cut(s)	367, 593, 1369, 1856, 1870, 2308
BstV2I	GAAGAC	2 cut(s)	120, 306
BstX2I	RGATCY	2 cut(s)	1960, 2161
BstXI	CCANNNNNNTGG	1 cut(s)	592
BstYI	RGATCY	2 cut(s)	1960, 2161
BstZ17I	GTATAC	1 cut(s)	46
Bsu36I	CCTNAGG	2 cut(s)	263, 1364
BsuI	GTATCC	3 cut(s)	955, 2010, 2101
BsuRI	GGCC	4 cut(s)	61, 1940, 2209, 2767
BtsIMutI	CAGTG	8 cut(s)	325, 1204, 1566, 1589, 1630, 1955, 2091, 2922
BveI	ACCTGC	2 cut(s)	477, 2485
Cac8I	GCNNGC	5 cut(s)	570, 1010, 1057, 2121, 2851
CaiI	CAGNNNCTG	1 cut(s)	1268
CciI	TCATGA	3 cut(s)	1168, 1486, 2833
CfoI	GCGC	2 cut(s)	1664, 2333
Cfr13I	GGNCC	5 cut(s)	59, 606, 1360, 1405, 2765
CseI	GACGC	2 cut(s)	2722, 3026
Csp6I	GTAC	5 cut(s)	1049, 1546, 1755, 1791, 2364
CspCI	CAANNNNNGTGG	2 cut(s)	598, 633
CviQI	GTAC	5 cut(s)	1049, 1546, 1755, 1791, 2364
DpnI	GATC	7 cut(s)	408, 1329, 1962, 2037, 2064, 2163, 2543
DpnII	GATC	7 cut(s)	406, 1327, 1960, 2035, 2062, 2161, 2541
DraI	TTTAAA	2 cut(s)	858, 1504
DraIII	CACNNNGTG	1 cut(s)	1685
EciI	GGCGGA	1 cut(s)	569
Ecl136II	GAGCTC	3 cut(s)	120, 1131, 2128
Eco130I	CCWWGG	4 cut(s)	177, 2598, 2958, 2985
Eco24I	GRGCYC	4 cut(s)	122, 1133, 2130, 2830
Eco32I	GATATC	2 cut(s)	1516, 2863
Eco47I	GGWCC	3 cut(s)	606, 1360, 1405
Eco53kI	GAGCTC	3 cut(s)	120, 1131, 2128
Eco57I	CTGAAG	2 cut(s)	1590, 2328
Eco72I	CACGTG	1 cut(s)	2690
Eco81I	CCTNAGG	2 cut(s)	263, 1364
Eco88I	CYCGRG	4 cut(s)	34, 55, 342, 865
Eco91I	GGTNACC	1 cut(s)	1346
EcoICRI	GAGCTC	3 cut(s)	120, 1131, 2128
EcoNI	CCTNNNNNAGG	4 cut(s)	266, 593, 2154, 2738
EcoO109I	RGGNCCY	2 cut(s)	59, 1360
EcoO65I	GGTNACC	1 cut(s)	1346
EcoRI	GAATTC	1 cut(s)	2837
EcoRII	CCWGG	2 cut(s)	440, 1003
EcoRV	GATATC	2 cut(s)	1516, 2863
EcoT14I	CCWWGG	4 cut(s)	177, 2598, 2958, 2985
EcoT38I	GRGCYC	4 cut(s)	122, 1133, 2130, 2830
ErhI	CCWWGG	4 cut(s)	177, 2598, 2958, 2985
Esp3I	CGTCTC	2 cut(s)	58, 320
FaqI	GGGAC	2 cut(s)	1373, 2572
FauI	CCCGC	1 cut(s)	747
FbaI	TGATCA	1 cut(s)	406
FblI	GTMKAC	2 cut(s)	45, 1860
Fnu4HI	GCNGC	7 cut(s)	356, 582, 1383, 1575, 1845, 1884, 2322
FriOI	GRGCYC	4 cut(s)	122, 1133, 2130, 2830
Fsp4HI	GCNGC	7 cut(s)	356, 582, 1383, 1575, 1845, 1884, 2322
FspI	TGCGCA	1 cut(s)	1663
GlaI	GCGC	2 cut(s)	1663, 2332
GluI	GCNGC	7 cut(s)	356, 582, 1383, 1575, 1845, 1884, 2322
GsuI	CTGGAG	3 cut(s)	927, 1764, 3136
HaeIII	GGCC	4 cut(s)	61, 1940, 2209, 2767
HapII	CCGG	3 cut(s)	454, 1718, 2142
HgaI	GACGC	2 cut(s)	2722, 3026
HhaI	GCGC	2 cut(s)	1664, 2333
Hin6I	GCGC	2 cut(s)	1662, 2331
HinP1I	GCGC	2 cut(s)	1662, 2331
HincII	GTYRAC	3 cut(s)	1671, 1861, 3016
HindII	GTYRAC	3 cut(s)	1671, 1861, 3016
HindIII	AAGCTT	1 cut(s)	1175
HpaII	CCGG	3 cut(s)	454, 1718, 2142
HphI	GGTGA	8 cut(s)	59, 202, 542, 610, 810, 1520, 2064, 3002
HpyCH4III	ACNGT	9 cut(s)	544, 1115, 1199, 1352, 1394, 1478, 1858, 2070, 2455
HpyCH4IV	ACGT	5 cut(s)	51, 2459, 2465, 2577, 2689
HpyF10VI	GCNNNNNNNGC	6 cut(s)	578, 726, 1232, 2120, 2125, 2330
HpySE526I	ACGT	5 cut(s)	51, 2459, 2465, 2577, 2689
HspAI	GCGC	2 cut(s)	1662, 2331
Kpn2I	TCCGGA	1 cut(s)	1717
Ksp22I	TGATCA	1 cut(s)	406
Kzo9I	GATC	7 cut(s)	406, 1327, 1960, 2035, 2062, 2161, 2541
LmnI	GCTCC	9 cut(s)	80, 117, 125, 565, 799, 1369, 2116, 2125, 2833
Lsp1109I	GCAGC	6 cut(s)	367, 593, 1369, 1856, 1870, 2308
LweI	GCATC	7 cut(s)	265, 376, 1249, 1856, 1942, 2432, 2491
MaeII	ACGT	5 cut(s)	51, 2459, 2465, 2577, 2689
MalI	GATC	7 cut(s)	408, 1329, 1962, 2037, 2064, 2163, 2543
MboI	GATC	7 cut(s)	406, 1327, 1960, 2035, 2062, 2161, 2541
MflI	RGATCY	2 cut(s)	1960, 2161
MhlI	GDGCHC	8 cut(s)	122, 717, 731, 1133, 1957, 2130, 2689, 2830
MmeI	TCCRAC	4 cut(s)	1000, 2034, 2429, 2929
MroI	TCCGGA	1 cut(s)	1717
MroXI	GAANNNNTTC	4 cut(s)	999, 1614, 2230, 2817
MslI	CAYNNNNRTG	1 cut(s)	1413
MspA1I	CMGCKG	1 cut(s)	2114
MspCI	CTTAAG	1 cut(s)	2735
MspI	CCGG	3 cut(s)	454, 1718, 2142
MspR9I	CCNGG	4 cut(s)	442, 454, 1005, 2142
MssI	GTTTAAAC	1 cut(s)	858
Mva1269I	GAATGC	3 cut(s)	1206, 2104, 2323
MvaI	CCWGG	2 cut(s)	442, 1005
MvnI	CGCG	2 cut(s)	2333, 2716
MwoI	GCNNNNNNNGC	6 cut(s)	578, 726, 1232, 2120, 2125, 2330
NciI	CCSGG	2 cut(s)	454, 2142
NdeII	GATC	7 cut(s)	406, 1327, 1960, 2035, 2062, 2161, 2541
NheI	GCTAGC	1 cut(s)	2119
NlaIV	GGNNCC	6 cut(s)	60, 1153, 1361, 1371, 1587, 2829
NmeAIII	GCCGAG	1 cut(s)	746
NmuCI	GTSAC	6 cut(s)	459, 1443, 1625, 2070, 2616, 2629
NsbI	TGCGCA	1 cut(s)	1663
NspI	RCATGY	3 cut(s)	232, 2853, 3061
NspV	TTCGAA	1 cut(s)	547
PaeI	GCATGC	1 cut(s)	2853
PaeR7I	CTCGAG	2 cut(s)	34, 342
PagI	TCATGA	3 cut(s)	1168, 1486, 2833
PciI	ACATGT	2 cut(s)	228, 3057
PctI	GAATGC	3 cut(s)	1206, 2104, 2323
PdmI	GAANNNNTTC	4 cut(s)	999, 1614, 2230, 2817
PfeI	GAWTC	6 cut(s)	290, 557, 1118, 1427, 1913, 2952
PflMI	CCANNNNNTGG	2 cut(s)	1929, 1987
PfoI	TCCNGGA	2 cut(s)	440, 452
PkrI	GCNGC	7 cut(s)	357, 583, 1384, 1576, 1846, 1885, 2323
PmaCI	CACGTG	1 cut(s)	2690
PmeI	GTTTAAAC	1 cut(s)	858
PmlI	CACGTG	1 cut(s)	2690
Ppu21I	YACGTR	1 cut(s)	2690
PpuMI	RGGWCCY	1 cut(s)	1360
PscI	ACATGT	2 cut(s)	228, 3057
PshAI	GACNNNNGTC	1 cut(s)	1395
PshBI	ATTAAT	1 cut(s)	2979
Psp124BI	GAGCTC	3 cut(s)	122, 1133, 2130
Psp1406I	AACGTT	1 cut(s)	2459
Psp5II	RGGWCCY	1 cut(s)	1360
Psp6I	CCWGG	2 cut(s)	440, 1003
PspCI	CACGTG	1 cut(s)	2690
PspEI	GGTNACC	1 cut(s)	1346
PspGI	CCWGG	2 cut(s)	440, 1003
PspN4I	GGNNCC	6 cut(s)	60, 1153, 1361, 1371, 1587, 2829
PspPI	GGNCC	5 cut(s)	59, 606, 1360, 1405, 2765
PspPPI	RGGWCCY	1 cut(s)	1360
PstI	CTGCAG	2 cut(s)	1387, 2326
PstNI	CAGNNNCTG	1 cut(s)	1268
PsuI	RGATCY	2 cut(s)	1960, 2161
RsaI	GTAC	5 cut(s)	1050, 1547, 1756, 1792, 2365
RsaNI	GTAC	5 cut(s)	1049, 1546, 1755, 1791, 2364
RseI	CAYNNNNRTG	1 cut(s)	1413
SacI	GAGCTC	3 cut(s)	122, 1133, 2130
SalI	GTCGAC	1 cut(s)	1859
SatI	GCNGC	7 cut(s)	356, 582, 1383, 1575, 1845, 1884, 2322
Sau3AI	GATC	7 cut(s)	406, 1327, 1960, 2035, 2062, 2161, 2541
Sau96I	GGNCC	5 cut(s)	59, 606, 1360, 1405, 2765
ScrFI	CCNGG	4 cut(s)	442, 454, 1005, 2142
SduI	GDGCHC	8 cut(s)	122, 717, 731, 1133, 1957, 2130, 2689, 2830
SfaNI	GCATC	7 cut(s)	265, 376, 1249, 1856, 1942, 2432, 2491
SfcI	CTRYAG	4 cut(s)	1383, 1393, 1854, 2322
Sfr274I	CTCGAG	2 cut(s)	34, 342
SfuI	TTCGAA	1 cut(s)	547
SinI	GGWCC	3 cut(s)	606, 1360, 1405
SlaI	CTCGAG	2 cut(s)	34, 342
SmiMI	CAYNNNNRTG	1 cut(s)	1413
SmlI	CTYRAG	5 cut(s)	34, 342, 1794, 2735, 2942
SmoI	CTYRAG	5 cut(s)	34, 342, 1794, 2735, 2942
SpeI	ACTAGT	1 cut(s)	611
SphI	GCATGC	1 cut(s)	2853
SstI	GAGCTC	3 cut(s)	122, 1133, 2130
StyD4I	CCNGG	4 cut(s)	440, 452, 1003, 2140
StyI	CCWWGG	4 cut(s)	177, 2598, 2958, 2985
TaaI	ACNGT	9 cut(s)	544, 1115, 1199, 1352, 1394, 1478, 1858, 2070, 2455
TaiI	ACGT	5 cut(s)	54, 2462, 2468, 2580, 2692
TaqI	TCGA	5 cut(s)	35, 343, 547, 687, 1860
TatI	WGTACW	2 cut(s)	1754, 1790
TauI	GCSGC	1 cut(s)	1577
TfiI	GAWTC	6 cut(s)	290, 557, 1118, 1427, 1913, 2952
TscAI	CASTG	8 cut(s)	325, 1204, 1573, 1596, 1630, 1962, 2098, 2929
TseFI	GTSAC	6 cut(s)	459, 1443, 1625, 2070, 2616, 2629
TseI	GCWGC	6 cut(s)	355, 581, 1382, 1844, 1883, 2321
Tsp45I	GTSAC	6 cut(s)	459, 1443, 1625, 2070, 2616, 2629
TspGWI	ACGGA	3 cut(s)	344, 478, 2204
TspRI	CASTG	8 cut(s)	325, 1204, 1573, 1596, 1630, 1962, 2098, 2929
Van91I	CCANNNNNTGG	2 cut(s)	1929, 1987
Vha464I	CTTAAG	1 cut(s)	2735
VneI	GTGCAC	2 cut(s)	1953, 2685
VpaK11BI	GGWCC	3 cut(s)	606, 1360, 1405
VspI	ATTAAT	1 cut(s)	2979
XagI	CCTNNNNNAGG	4 cut(s)	266, 593, 2154, 2738
XapI	RAATTY	7 cut(s)	155, 1499, 2230, 2260, 2508, 2837, 3109
XbaI	TCTAGA	1 cut(s)	878
XceI	RCATGY	3 cut(s)	232, 2853, 3061
XcmI	CCANNNNNNNNNTGG	2 cut(s)	184, 1538
XhoI	CTCGAG	2 cut(s)	34, 342
XmiI	GTMKAC	2 cut(s)	45, 1860
XmnI	GAANNNNTTC	4 cut(s)	999, 1614, 2230, 2817

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.