AT5G43020

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0011041
Physical Location & Seq
Reverse (-)
17255205 .. 17258077
2873 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G43020.1

Sequence Viewer

Length: 2010 bp
ATGCTTCTTCGATGTAACTTACCCATTTCTGGGTTTCTTCTCTTCTGTTTCCTCTTTACCATTGTTGCTTCTTCTTCTTCTTCCTCCAACCACACAAAGCGCGTGTTTCATTCTCACCGTGACGTTTCTGCTTTGTTACGTTTTAAATCCAAAGCTGATTTATGGAACAAGATAAACACGAGCTCTCATTTTTGTCAATGGTGGGGTGTTACGTGTTATGGAAACAGAGTTGTTCGTTTGGTTATTGAAGATCTTTATCTTGGAGGGCGACTCATTCCTGACTCAGTTAATAAACTCGACCAGCTTCGAGTTCTGAGTCTCAAGAACACTTCCTTAACCGGACCGTTACCAGATTTCTCCGGTTTGGTTAATCTCAAATCATTATTCCTCGATCACAACTCTTTTTCCGGTTCGTTTCCTCTCTCGGTTCTCGCTTTTCACCGGTTAAGAACTCTCGATTTCTCCTTCAATAACCTCACCGGTCCAATCCCATCCGGTTTAGTTCTCTCCGACCGGTTGATTTATCTCCGACTTGATTCGAATCGGTTCAACGGTCCCGTCCCGCCTTTAAACCAATCCACGCTTCATACATTCAATGTTTCGGTTAACAACTTAACCGGTGCTGTACCGGTGACAACCGTTCTGTTACGATTCGGTATTTCTTCATTTCTCAAAAACCCTAATCTCTGCGGTGAGATTGTTCACAAAGAATGCAATCCGAGAGCCAAATTCTTCACTCCGGTAACGGCGGCGCCGTCACCGAAGATGGTTCTCGGTCAAATAGCGCAAATAGGCGGCGCAAGATTATCCCGGCCAAGTCAAAACAAACATTCACGATTTTTTGTGATTCTCGGTTTTATCTCCGGCGCTTTTATCCTCTTCATCTCCGTCGCGTGCCTTATCGGCGCAGTGAAGAGACGAAGAAGCAAAACCGAGAAACAAAAGGGGAAAGAATCAACGGCGGTTGTGACATTTGACGCGGCGGAGACGGCGGAAGTAGCGGCGGCGATAGAACAAGAGAGTGAGATAGAAGAGAAAGTGAAGAAGCTACAAGCGACAAAAAGTGGGAGTTTAGTATTCTGTGCGGGTGAGGCACACGTTTATACGATGGACCAACTAATGACAGCATCAGCTGAGTTATTAGGTCGAGGAACAGTGGGGACCACTTATAAAGCGTTGCTTGATAGCCGTTTGATCGTCACGGTGAAGAGATTAGATGCCATTAGATTAGCGGGTGTAGGGAGAGACAAATTTGAGCATCACATGGAATCAGTTGGTGCTTTAGGGCATCCGAATTTGGTTCCACTCAGAGCTTATTTTCAGGCCAAGGAAGAGAGGTTATTGATTTATGATTATTTGCCAAATGGCAGTCTCTCGTCTCTTGTCCACGGTACAAAATCGTCGAGGGCAACGCCATTGCATTGGACATCTTGTTTGAAGATAGCAGAAGACGTCGCTCAGGGTCTCTCTTACATCCACCAAGCATGGCAGCTAGTTCACGGCAATCTCAAATCCTCTAATGTCCTTCTTGGACAAGACTTTGAAGCTTGTATTGCTGATTACTGTCTCGTTGCTCTTGCAACAAACCCTCCTCTAACATCCAATGACGGTCAAGAAGACGCGGATGCAGCAGCCTATAAACCCCCTGAAGCTCGACACAAGAGTCTAAATTATCAATCGGTTAAGGCTGATGTATACTCCTTTGGGATTCTTCTCTTGGAGCTTTTGACAGGGAAGCAACCTTCGAAGATTCCGGTTTTGCCTTTGGATGAGATGATCGAATGGGTGAGGAAAGTGAGAGAGGAAGGTGAGAAGAAGAATGGGAATTGGAGAGAAGATAGGGATAAATTCGGAATGTTGACTGAAGTTGCGGTAGCTTGTAGCTTAGCATCGCCGGAACAGAGACCGACGATGTGGCAAGTGTTGAAAATGTTGCAAGAGATTAAAGAAGCGGCTGTGATGGAAGAGTGTGAACTTGTTATGGATTCTGCTAATTCTGAAAGCTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

669

Amino Acids

73.93

Weight (kDa)

8.86

Isoelectric Point (pI)

42.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 378 - 643 2.5e-27 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 379 - 644 1.1e-29 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G43020
fragaria_vesca FvH4_2g33931 FvH4_2g33931
malus_domestica MD08G1095100.v1.1 MD15G1078000.v1.1
prunus_persica Prupe.1G431300_v2.0.a1
pyrus_communis pycom08g07710 pycom15g07280
rosa_chinensis RchiOBHm_Chr6g0308471
rosa_laevigata RLG00000010640
rosa_multiflora Rmu_co8342223.1_g000001 Rmu_sc0001485.1_g000009 Rmu_sc0011796.1_g000010
rosa_roxburghii Rroxscaffold_7G00160100
rosa_rugosa Rorug06G0367000
rosa_samantha Rh6AG476800 Rh6BG487000 Rh6CG492100 Rh6DG478200
rosa_wichuraiana Rw6G041590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1170
AasI GACNNNNNNGTC 1 cut(s) 1662
AatII GACGTC 1 cut(s) 1455
AccB1I GGYRCC 1 cut(s) 751
AccI GTMKAC 1 cut(s) 1695
AccII CGCG 4 cut(s) 102, 893, 980, 1622
AcoI YGGCCR 1 cut(s) 812
AcsI RAATTY 4 cut(s) 728, 1250, 1294, 1847
AcuI CTGAAG 2 cut(s) 1668, 1884
AcyI GRCGYC 2 cut(s) 752, 1452
AfaI GTAC 2 cut(s) 627, 1393
AfiI CCNNNNNNNGG 2 cut(s) 29, 30
AflIII ACRYGT 2 cut(s) 212, 1096
AgeI ACCGGT 5 cut(s) 441, 479, 513, 617, 628
AgsI TTSAA 7 cut(s) 248, 469, 550, 595, 1438, 1544, 1927
AjuI GAANNNNNNNTTGG 2 cut(s) 567, 599
Alw21I GWGCWC 1 cut(s) 185
Alw26I GTCTC 9 cut(s) 323, 910, 980, 1239, 1376, 1383, 1469, 1571, 1897
AoxI GGCC 2 cut(s) 812, 1323
ApeKI GCWGC 3 cut(s) 1489, 1628, 1631
ApoI RAATTY 4 cut(s) 728, 1250, 1294, 1847
ArsI GACNNNNNNTTYG 2 cut(s) 1417, 1449
AsiGI ACCGGT 5 cut(s) 441, 479, 513, 617, 628
Asp700I GAANNNNTTC 1 cut(s) 545
AspLEI GCGC 6 cut(s) 102, 754, 787, 800, 869, 908
AspS9I GGNCC 5 cut(s) 341, 482, 554, 1111, 1161
AsuC2I CCSGG 1 cut(s) 811
AsuII TTCGAA 2 cut(s) 539, 1745
AvaII GGWCC 5 cut(s) 341, 482, 554, 1111, 1161
BanI GGYRCC 1 cut(s) 751
BanII GRGCYC 1 cut(s) 185
BauI CACGAG 1 cut(s) 178
BbsI GAAGAC 2 cut(s) 1455, 1623
Bbv12I GWGCWC 1 cut(s) 185
BbvI GCAGC 3 cut(s) 1501, 1640, 1643
BccI CCATC 4 cut(s) 499, 760, 1102, 1954
BceAI ACGGC 6 cut(s) 739, 762, 975, 1005, 1173, 1516
BcnI CCSGG 1 cut(s) 811
BcoDI GTCTC 9 cut(s) 323, 910, 980, 1239, 1376, 1383, 1469, 1571, 1897
BfaI CTAG 1 cut(s) 1493
BfoI RGCGCY 2 cut(s) 755, 870
BglI GCCNNNNNGGC 1 cut(s) 903
BglII AGATCT 1 cut(s) 250
BisI GCNGC 9 cut(s) 750, 796, 981, 1002, 1005, 1490, 1629, 1632, 1953
BlpI GCTNAGC 1 cut(s) 1885
BlsI GCNGC 9 cut(s) 751, 797, 982, 1003, 1006, 1491, 1630, 1633, 1954
Bme1390I CCNGG 1 cut(s) 811
Bme18I GGWCC 5 cut(s) 341, 482, 554, 1111, 1161
BmgT120I GGNCC 5 cut(s) 341, 482, 554, 1111, 1161
BmiI GGNNCC 4 cut(s) 556, 753, 1162, 1302
BmrFI CCNGG 1 cut(s) 811
BmsI GCATC 6 cut(s) 1136, 1207, 1267, 1297, 1615, 1898
BpiI GAAGAC 2 cut(s) 1455, 1623
BplI GAGNNNNNCTC 2 cut(s) 255, 287
Bpu10I CCTNAGC 1 cut(s) 1458
Bpu1102I GCTNAGC 1 cut(s) 1885
Bpu14I TTCGAA 2 cut(s) 539, 1745
BpuEI CTTGAG 1 cut(s) 305
BpuMI CCSGG 1 cut(s) 811
BsaAI YACGTR 1 cut(s) 213
BsaBI GATNNNNATC 2 cut(s) 255, 540
BsaHI GRCGYC 2 cut(s) 752, 1452
BsaI GGTCTC 2 cut(s) 1469, 1897
BsaJI CCNNGG 2 cut(s) 1326, 1387
BsaXI ACNNNNNCTCC 2 cut(s) 1573, 1603
Bsc4I CCNNNNNNNGG 2 cut(s) 29, 30
Bse118I RCCGGY 5 cut(s) 441, 479, 513, 617, 628
Bse3DI GCAATG 1 cut(s) 1415
Bse8I GATNNNNATC 2 cut(s) 255, 540
BseDI CCNNGG 2 cut(s) 1326, 1387
BseGI GGATG 6 cut(s) 491, 1288, 1473, 1598, 1630, 1774
BseJI GATNNNNATC 2 cut(s) 255, 540
BseLI CCNNNNNNNGG 2 cut(s) 29, 30
BseMI GCAATG 1 cut(s) 1415
BseMII CTCAG 5 cut(s) 297, 305, 1125, 1321, 1472
BseRI GAGGAG 1 cut(s) 1581
BseXI GCAGC 3 cut(s) 1501, 1640, 1643
Bsh1236I CGCG 4 cut(s) 102, 893, 980, 1622
Bsh1285I CGRYCG 1 cut(s) 514
BshFI GGCC 2 cut(s) 814, 1325
BshNI GGYRCC 1 cut(s) 751
BshTI ACCGGT 5 cut(s) 441, 479, 513, 617, 628
BsiEI CGRYCG 1 cut(s) 514
BsiHKAI GWGCWC 1 cut(s) 185
BslFI GGGAC 3 cut(s) 540, 545, 1174
BslI CCNNNNNNNGG 2 cut(s) 29, 30
BsmAI GTCTC 9 cut(s) 323, 910, 980, 1239, 1376, 1383, 1469, 1571, 1897
BsmBI CGTCTC 3 cut(s) 910, 980, 1383
BsmFI GGGAC 3 cut(s) 540, 545, 1174
BsmI GAATGC 1 cut(s) 716
BsnI GGCC 2 cut(s) 814, 1325
Bso31I GGTCTC 2 cut(s) 1469, 1897
Bsp119I TTCGAA 2 cut(s) 539, 1745
Bsp1286I GDGCHC 1 cut(s) 185
Bsp143I GATC 4 cut(s) 250, 391, 1194, 1776
Bsp1720I GCTNAGC 1 cut(s) 1885
BspANI GGCC 2 cut(s) 814, 1325
BspCNI CTCAG 5 cut(s) 296, 306, 1126, 1320, 1471
BspFNI CGCG 4 cut(s) 102, 893, 980, 1622
BspLI GGNNCC 4 cut(s) 556, 753, 1162, 1302
BspT104I TTCGAA 2 cut(s) 539, 1745
BspT107I GGYRCC 1 cut(s) 751
BspTNI GGTCTC 2 cut(s) 1469, 1897
BsrDI GCAATG 1 cut(s) 1415
BsrFI RCCGGY 5 cut(s) 441, 479, 513, 617, 628
BssAI RCCGGY 5 cut(s) 441, 479, 513, 617, 628
BssECI CCNNGG 2 cut(s) 1326, 1387
BssMI GATC 4 cut(s) 250, 391, 1194, 1776
BssNAI GTATAC 1 cut(s) 1696
BssNI GRCGYC 2 cut(s) 752, 1452
BssSI CACGAG 1 cut(s) 178
BssT1I CCWWGG 1 cut(s) 1326
Bst1107I GTATAC 1 cut(s) 1696
Bst2BI CACGAG 1 cut(s) 178
Bst4CI ACNGT 9 cut(s) 119, 345, 554, 640, 1156, 1204, 1391, 1565, 1610
Bst6I CTCTTC 7 cut(s) 47, 884, 908, 1026, 1202, 1326, 1959
BstACI GRCGYC 2 cut(s) 752, 1452
BstBAI YACGTR 1 cut(s) 213
BstBI TTCGAA 2 cut(s) 539, 1745
BstC8I GCNNGC 1 cut(s) 895
BstDEI CTNAG 6 cut(s) 283, 314, 1134, 1307, 1458, 1885
BstDSI CCRYGG 1 cut(s) 1387
BstF5I GGATG 6 cut(s) 491, 1288, 1473, 1598, 1630, 1774
BstFNI CGCG 4 cut(s) 102, 893, 980, 1622
BstH2I RGCGCY 2 cut(s) 755, 870
BstHHI GCGC 6 cut(s) 102, 754, 787, 800, 869, 908
BstKTI GATC 4 cut(s) 253, 394, 1197, 1779
BstMAI GTCTC 9 cut(s) 323, 910, 980, 1239, 1376, 1383, 1469, 1571, 1897
BstMBI GATC 4 cut(s) 250, 391, 1194, 1776
BstMCI CGRYCG 1 cut(s) 514
BstMWI GCNNNNNNNGC 6 cut(s) 903, 989, 998, 1091, 1553, 1628
BstSCI CCNGG 1 cut(s) 809
BstUI CGCG 4 cut(s) 102, 893, 980, 1622
BstV1I GCAGC 3 cut(s) 1501, 1640, 1643
BstV2I GAAGAC 2 cut(s) 1455, 1623
BstX2I RGATCY 1 cut(s) 250
BstXI CCANNNNNNTGG 1 cut(s) 1422
BstYI RGATCY 1 cut(s) 250
BstZ17I GTATAC 1 cut(s) 1696
BsuRI GGCC 2 cut(s) 814, 1325
BtgI CCRYGG 1 cut(s) 1387
BtgZI GCGATG 1 cut(s) 1875
BtsCI GGATG 6 cut(s) 491, 1288, 1473, 1598, 1630, 1774
BtsI GCAGTG 1 cut(s) 915
BtsIMutI CAGTG 2 cut(s) 915, 1161
Cac8I GCNNGC 1 cut(s) 895
CfoI GCGC 6 cut(s) 102, 754, 787, 800, 869, 908
Cfr10I RCCGGY 5 cut(s) 441, 479, 513, 617, 628
Cfr13I GGNCC 5 cut(s) 341, 482, 554, 1111, 1161
CpoI CGGWCCG 1 cut(s) 341
CseI GACGC 2 cut(s) 986, 1628
Csp6I GTAC 2 cut(s) 626, 1392
CspAI ACCGGT 5 cut(s) 441, 479, 513, 617, 628
CspI CGGWCCG 1 cut(s) 341
CviAII CATG 2 cut(s) 1264, 1485
CviQI GTAC 2 cut(s) 626, 1392
DdeI CTNAG 6 cut(s) 283, 314, 1134, 1307, 1458, 1885
DinI GGCGCC 1 cut(s) 753
DpnI GATC 4 cut(s) 252, 393, 1196, 1778
DpnII GATC 4 cut(s) 250, 391, 1194, 1776
DraI TTTAAA 2 cut(s) 145, 570
DrdI GACNNNNNNGTC 1 cut(s) 1662
DseDI GACNNNNNNGTC 1 cut(s) 1662
EaeI YGGCCR 1 cut(s) 812
Eam1104I CTCTTC 7 cut(s) 47, 884, 908, 1026, 1202, 1326, 1959
EarI CTCTTC 7 cut(s) 47, 884, 908, 1026, 1202, 1326, 1959
EciI GGCGGA 2 cut(s) 998, 1007
Ecl136II GAGCTC 1 cut(s) 183
Eco130I CCWWGG 1 cut(s) 1326
Eco24I GRGCYC 1 cut(s) 185
Eco31I GGTCTC 2 cut(s) 1469, 1897
Eco47I GGWCC 5 cut(s) 341, 482, 554, 1111, 1161
Eco53kI GAGCTC 1 cut(s) 183
Eco57I CTGAAG 2 cut(s) 1668, 1884
EcoICRI GAGCTC 1 cut(s) 183
EcoT14I CCWWGG 1 cut(s) 1326
EcoT38I GRGCYC 1 cut(s) 185
EgeI GGCGCC 1 cut(s) 753
EheI GGCGCC 1 cut(s) 753
ErhI CCWWGG 1 cut(s) 1326
Esp3I CGTCTC 3 cut(s) 910, 980, 1383
FaeI CATG 2 cut(s) 1267, 1488
FalI AAGNNNNNCTT 2 cut(s) 1164, 1196
FaqI GGGAC 3 cut(s) 540, 545, 1174
FatI CATG 2 cut(s) 1263, 1484
FauI CCCGC 3 cut(s) 570, 1078, 1225
FblI GTMKAC 1 cut(s) 1695
Fnu4HI GCNGC 9 cut(s) 750, 796, 981, 1002, 1005, 1490, 1629, 1632, 1953
FokI GGATG 6 cut(s) 478, 1275, 1460, 1585, 1637, 1781
FriOI GRGCYC 1 cut(s) 185
Fsp4HI GCNGC 9 cut(s) 750, 796, 981, 1002, 1005, 1490, 1629, 1632, 1953
FspBI CTAG 1 cut(s) 1493
GlaI GCGC 6 cut(s) 101, 753, 786, 799, 868, 907
GluI GCNGC 9 cut(s) 750, 796, 981, 1002, 1005, 1490, 1629, 1632, 1953
HaeII RGCGCY 2 cut(s) 755, 870
HaeIII GGCC 2 cut(s) 814, 1325
HgaI GACGC 2 cut(s) 986, 1628
HhaI GCGC 6 cut(s) 102, 754, 787, 800, 869, 908
Hin1I GRCGYC 2 cut(s) 752, 1452
Hin1II CATG 2 cut(s) 1267, 1488
Hin6I GCGC 6 cut(s) 100, 752, 785, 798, 867, 906
HinP1I GCGC 6 cut(s) 100, 752, 785, 798, 867, 906
HincII GTYRAC 2 cut(s) 607, 1860
HindII GTYRAC 2 cut(s) 607, 1860
HindIII AAGCTT 1 cut(s) 1545
HpaI GTTAAC 1 cut(s) 607
Hpy166II GTNNAC 7 cut(s) 607, 703, 1387, 1498, 1696, 1860, 1973
Hpy188I TCNGA 8 cut(s) 315, 511, 530, 720, 1293, 1310, 1853, 1999
Hpy188III TCNNGA 5 cut(s) 278, 322, 455, 834, 1613
Hpy8I GTNNAC 7 cut(s) 607, 703, 1387, 1498, 1696, 1860, 1973
Hpy99I CGWCG 4 cut(s) 893, 1405, 1457, 1912
HpyAV CCTTC 4 cut(s) 475, 1535, 1752, 1799
HpyCH4III ACNGT 9 cut(s) 119, 345, 554, 640, 1156, 1204, 1391, 1565, 1610
HpyCH4IV ACGT 5 cut(s) 123, 139, 212, 1098, 1452
HpyCH4V TGCA 5 cut(s) 714, 1420, 1580, 1628, 1936
HpyF10VI GCNNNNNNNGC 6 cut(s) 903, 989, 998, 1091, 1553, 1628
HpyF3I CTNAG 6 cut(s) 283, 314, 1134, 1307, 1458, 1885
HpySE526I ACGT 5 cut(s) 123, 139, 212, 1098, 1452
Hsp92I GRCGYC 2 cut(s) 752, 1452
Hsp92II CATG 2 cut(s) 1267, 1488
HspAI GCGC 6 cut(s) 100, 752, 785, 798, 867, 906
KasI GGCGCC 1 cut(s) 751
KspAI GTTAAC 1 cut(s) 607
Kzo9I GATC 4 cut(s) 250, 391, 1194, 1776
LmnI GCTCC 1 cut(s) 1720
Lsp1109I GCAGC 3 cut(s) 1501, 1640, 1643
LweI GCATC 6 cut(s) 1136, 1207, 1267, 1297, 1615, 1898
MaeI CTAG 1 cut(s) 1493
MaeII ACGT 5 cut(s) 123, 139, 212, 1098, 1452
MalI GATC 4 cut(s) 252, 393, 1196, 1778
MboI GATC 4 cut(s) 250, 391, 1194, 1776
MflI RGATCY 1 cut(s) 250
MhlI GDGCHC 1 cut(s) 185
MluCI AATT 7 cut(s) 728, 1250, 1294, 1669, 1825, 1847, 1993
Mly113I GGCGCC 1 cut(s) 752
MlyI GAGTC 4 cut(s) 264, 275, 325, 1672
MmeI TCCRAC 3 cut(s) 111, 534, 553
MroXI GAANNNNTTC 1 cut(s) 545
MspA1I CMGCKG 1 cut(s) 1133
MspR9I CCNGG 1 cut(s) 811
Mva1269I GAATGC 1 cut(s) 716
MvnI CGCG 4 cut(s) 102, 893, 980, 1622
MwoI GCNNNNNNNGC 6 cut(s) 903, 989, 998, 1091, 1553, 1628
NarI GGCGCC 1 cut(s) 752
NciI CCSGG 1 cut(s) 811
NdeII GATC 4 cut(s) 250, 391, 1194, 1776
NlaIII CATG 2 cut(s) 1267, 1488
NlaIV GGNNCC 4 cut(s) 556, 753, 1162, 1302
NmuCI GTSAC 5 cut(s) 119, 631, 756, 967, 1198
NspV TTCGAA 2 cut(s) 539, 1745
PcsI WCGNNNNNNNCGW 1 cut(s) 752
PctI GAATGC 1 cut(s) 716
PdmI GAANNNNTTC 1 cut(s) 545
PfeI GAWTC 9 cut(s) 536, 541, 651, 847, 953, 1268, 1708, 1750, 1985
PinAI ACCGGT 5 cut(s) 441, 479, 513, 617, 628
PkrI GCNGC 9 cut(s) 751, 797, 982, 1003, 1006, 1491, 1630, 1633, 1954
PleI GAGTC 4 cut(s) 264, 275, 324, 1671
PluTI GGCGCC 1 cut(s) 755
PpsI GAGTC 4 cut(s) 264, 275, 324, 1671
Ppu21I YACGTR 1 cut(s) 213
PsiI TTATAA 1 cut(s) 1170
Psp124BI GAGCTC 1 cut(s) 185
PspN4I GGNNCC 4 cut(s) 556, 753, 1162, 1302
PspPI GGNCC 5 cut(s) 341, 482, 554, 1111, 1161
PsuI RGATCY 1 cut(s) 250
PvuII CAGCTG 1 cut(s) 1133
RsaI GTAC 2 cut(s) 627, 1393
RsaNI GTAC 2 cut(s) 626, 1392
Rsr2I CGGWCCG 1 cut(s) 341
RsrII CGGWCCG 1 cut(s) 341
SacI GAGCTC 1 cut(s) 185
SatI GCNGC 9 cut(s) 750, 796, 981, 1002, 1005, 1490, 1629, 1632, 1953
Sau3AI GATC 4 cut(s) 250, 391, 1194, 1776
Sau96I GGNCC 5 cut(s) 341, 482, 554, 1111, 1161
SchI GAGTC 4 cut(s) 264, 275, 325, 1672
ScrFI CCNGG 1 cut(s) 811
SduI GDGCHC 1 cut(s) 185
SfaNI GCATC 6 cut(s) 1136, 1207, 1267, 1297, 1615, 1898
SfoI GGCGCC 1 cut(s) 753
SfuI TTCGAA 2 cut(s) 539, 1745
SinI GGWCC 5 cut(s) 341, 482, 554, 1111, 1161
SmlI CTYRAG 1 cut(s) 320
SmoI CTYRAG 1 cut(s) 320
Sse9I AATT 7 cut(s) 728, 1250, 1294, 1669, 1825, 1847, 1993
SspDI GGCGCC 1 cut(s) 751
SspMI CTAG 1 cut(s) 1493
SstI GAGCTC 1 cut(s) 185
StyD4I CCNGG 1 cut(s) 809
StyI CCWWGG 1 cut(s) 1326
TaaI ACNGT 9 cut(s) 119, 345, 554, 640, 1156, 1204, 1391, 1565, 1610
TaiI ACGT 5 cut(s) 126, 142, 215, 1101, 1455
TaqII GACCGA 2 cut(s) 764, 1921
TasI AATT 7 cut(s) 728, 1250, 1294, 1669, 1825, 1847, 1993
TauI GCSGC 6 cut(s) 752, 798, 983, 1004, 1007, 1955
TfiI GAWTC 9 cut(s) 536, 541, 651, 847, 953, 1268, 1708, 1750, 1985
TscAI CASTG 2 cut(s) 915, 1161
TseFI GTSAC 5 cut(s) 119, 631, 756, 967, 1198
TseI GCWGC 3 cut(s) 1489, 1628, 1631
Tsp45I GTSAC 5 cut(s) 119, 631, 756, 967, 1198
TspDTI ATGAA 4 cut(s) 98, 575, 654, 871
TspGWI ACGGA 1 cut(s) 877
TspRI CASTG 2 cut(s) 915, 1161
VpaK11BI GGWCC 5 cut(s) 341, 482, 554, 1111, 1161
XapI RAATTY 4 cut(s) 728, 1250, 1294, 1847
XmiI GTMKAC 1 cut(s) 1695
XmnI GAANNNNTTC 1 cut(s) 545
XspI CTAG 1 cut(s) 1493
ZraI GACGTC 1 cut(s) 1453
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.