Rh6AG476800
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0011041
Physical Location & Seq
Reverse (-)
65828698 .. 65831639
2942 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG476800.1

Sequence Viewer

Length: 2028 bp
ATGCTCATCAACAAATGGAAACTACCCTCATTTCCTCTGTTTCTACTATTCACCTCTGTTTTCCTCTCATTTTGCACCACCTCAGTTACCAGTTCTTCAGTGAACTCATCATCCTCTTCAAACCCCTCAGATGCTGTTGCGCTTCTTGATTTCAAAGCAAAAGCTGATTTGAGCAGCGCACTTCCCTTCTCAAACACCACCCTCCAATATTTGTGTCAATGGGCTGGGATCGAATGCGCGAAATCGAGAGTGGTCCGGTTAGTAATCCAAGACTTGGATCTCGGCGGTGTTTTCGCACCGGACACTCTGACCCGCCTGGACCAACTCCGAGTCCTGAGTCTCCAGAATGACTCGCTCACCGGGCCGGTTCCCGATCTCTCCGGACTCTTCAACCTCAAAACCCTCTTCCTTGATCACAACTCATTCTCCGGTTCTCTTCCGCATTCCCTCTCCTCTCTCCATAGGCTTCGAACCCTTGATTTCTCTTATAACAACCTCACCGGTCCATTGCCCGAATGGCTGAGCGGTCTGAACCGGCTCTACTATCTCCGCCTCGAGTGGAACCGCTTCAACGGAACCGTCCCGCCTCTGAACCAGTCCTCTCTCCAAACCTTTAACGTCTCCGGAAACAACCTCACCGGCGTCGTACCGGTCACTCCGACTCTCCTCCGCTTCGGACCGTCATCGTTCTTGTGGAACCCTAGTCTTTGCGGCGAGATCATTCGCATAGAATGCCACCCAAACGCACCGTTTTTCCGTCCGGCGACTCCGTCTACAGTTCCCACGGCTCCGTCGCCTAGTCGCGCACTCGGGCTGAGAACCGGTCAGGGCGTTGAGTTGACTGAGCCGTGTCACAAGAAGCGCAAGAGAACCGCCGTCCTCATCGGCTTCTCTTCCGCCGTGTTCGTCCTGATCTGCTCGATCCTCTGCTTCGTCCTGGCCGTCAAGAAACAGAGGAAGCACGTCAAAAGGACGGACTTGTCCTCGGACGACGCGGCGGCGGCGCAGGCGGCGGCGGCGGTGCAGATGGAGCAGGAGGAGCTGGAGCAGAAGGTGAAGAGAGTTCAGGGGATTCAGGTGGTGAAGAGCGGGAGCTTGTTGTTCTGTGCGGGCGAGGCGCAGGTGTACTCGCTGGACCAGCTGATGAGGGCGTCGGCGGAGCTTTTGGGAAGAGGGACGCTGGGGTCCACCTACAAGGCGGTGCTGGACAACCGTCTGATCGTCTGCGTTAAACGGCTGGATGCTAGTGTGTTGGAGGGTACGGGTAGGGAAGCCTTCGAGAGGCACTTGGAATCGGTGGGAGCGCTCCGGCATCCGAACCTGGTTCCGCTCCGAGCTTATTTTCAGGCCAAAGAAGAGAGGCTCCTCATCTACGATTACCAGCCCAACGGCAGCCTCTTCTCCCTCATTCACGGTTCAAAATCAACGAGGGCAAAGCCTCTGCACTGGACATCATGCTTGAAAATAGCAGAGGACGTAGCGCAAGGCCTCTCTTACATCCACCAAGCATGGAGGCTTGTCCACGGAAATCTCAAGTCCTCCAACGTGCTACTTGGCTCCGACTTTGAGGCATGTGTCACTGACTACTGCCTCTCCGTTCTCGCTACTAGTCTTCCGCCATGGGAGGAGGAGAACCCTGATTCTGCTGCCTACAAAGCACCAGAGACTCGCCATTCAAATCACTCACCAACTCCCAAGTCTGATGTGTATGCATATGGTATTTTGCTGGTGGAACTTCTCACGGGGAGGCCTCCGTCGCAGCACTTAGTTTCGGTGCCCCCAAATGACATGATGCAATGGGTGAGGTCTGTGAGGGAAGAATCAGATCATGATGGTGGTGGTGGTGGTGATTCAGAAGAGAGTAGTAATAAGATGGGAATGCTGCTGGAGGTGGCCATAACTTGTAGAACAGCTTCGCCGGAGCAGAGACCGACTATGTGGCAGGTTTTGAAGATGTTGCAGGAGATTAAAGAGAATGTGGCCGCGGATGAAACTGACACCGAGTTAATGGGATCATGTCCTCGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

675

Amino Acids

74.25

Weight (kDa)

7.22

Isoelectric Point (pI)

48.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 103 - 189 9.5e-07 Leucine-rich repeat region
LRR_8 PF13855 131 - 190 3e-09 Leucine rich repeat
Pkinase PF00069 387 - 651 3.1e-31 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 387 - 652 8.7e-29 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G43020
fragaria_vesca FvH4_2g33931 FvH4_2g33931
malus_domestica MD08G1095100.v1.1 MD15G1078000.v1.1
prunus_persica Prupe.1G431300_v2.0.a1
pyrus_communis pycom08g07710 pycom15g07280
rosa_chinensis RchiOBHm_Chr6g0308471
rosa_laevigata RLG00000010640
rosa_multiflora Rmu_co8342223.1_g000001 Rmu_sc0001485.1_g000009 Rmu_sc0011796.1_g000010
rosa_roxburghii Rroxscaffold_7G00160100
rosa_rugosa Rorug06G0367000
rosa_samantha Rh6AG476800 Rh6BG487000 Rh6CG492100 Rh6DG478200
rosa_wichuraiana Rw6G041590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 489
AarI CACCTGC 1 cut(s) 1111
AasI GACNNNNNNGTC 2 cut(s) 979, 1183
Acc36I ACCTGC 2 cut(s) 1111, 1933
AccB1I GGYRCC 1 cut(s) 1774
AccB7I CCANNNNNTGG 1 cut(s) 274
AccBSI CCGCTC 3 cut(s) 525, 1089, 1330
AccI GTMKAC 1 cut(s) 773
AccII CGCG 4 cut(s) 239, 804, 995, 1985
AccIII TCCGGA 2 cut(s) 380, 623
AclWI GGATC 4 cut(s) 236, 285, 916, 2020
AcoI YGGCCR 3 cut(s) 939, 1893, 1980
AcuI CTGAAG 1 cut(s) 81
AcyI GRCGYC 2 cut(s) 642, 1151
AfaI GTAC 3 cut(s) 648, 1127, 1261
AfeI AGCGCT 1 cut(s) 1305
AfiI CCNNNNNNNGG 2 cut(s) 274, 1281
AgeI ACCGGT 3 cut(s) 500, 649, 821
AgsI TTSAA 8 cut(s) 120, 154, 391, 571, 1419, 1462, 1677, 1951
AhlI ACTAGT 1 cut(s) 1607
AjiI CACGTC 1 cut(s) 964
AjnI CCWGG 3 cut(s) 315, 936, 1320
AloI GAACNNNNNNTCC 2 cut(s) 95, 127
AluBI AGCT 7 cut(s) 164, 1042, 1095, 1141, 1162, 1337, 1913
AluI AGCT 7 cut(s) 164, 1042, 1095, 1141, 1162, 1337, 1913
Alw26I GTCTC 4 cut(s) 344, 625, 1658, 1921
AlwI GGATC 4 cut(s) 236, 285, 916, 2020
AlwNI CAGNNNCTG 1 cut(s) 134
Ama87I CYCGRG 2 cut(s) 554, 809
Aor13HI TCCGGA 2 cut(s) 380, 623
Aor51HI AGCGCT 1 cut(s) 1305
AoxI GGCC 7 cut(s) 362, 939, 1347, 1486, 1748, 1893, 1980
ApeKI GCWGC 5 cut(s) 174, 1392, 1646, 1759, 1882
AsiGI ACCGGT 3 cut(s) 500, 649, 821
Asp700I GAANNNNTTC 2 cut(s) 566, 1912
AspLEI GCGC 9 cut(s) 142, 179, 239, 806, 864, 1006, 1120, 1306, 1483
AspS9I GGNCC 7 cut(s) 253, 319, 362, 503, 677, 1135, 1185
AsuC2I CCSGG 1 cut(s) 361
AsuHPI GGTGA 9 cut(s) 43, 349, 490, 628, 1066, 1093, 1677, 1813, 1859
AsuII TTCGAA 1 cut(s) 469
AvaI CYCGRG 2 cut(s) 554, 809
AvaII GGWCC 6 cut(s) 253, 319, 503, 677, 1135, 1185
BaeGI GKGCMC 1 cut(s) 1779
BalI TGGCCA 1 cut(s) 1895
BanI GGYRCC 1 cut(s) 1774
BarI GAAGNNNNNNTAC 2 cut(s) 1897, 1929
BbsI GAAGAC 1 cut(s) 1604
BbvI GCAGC 5 cut(s) 186, 1404, 1633, 1771, 1869
BccI CCATC 3 cut(s) 1021, 1826, 1867
BceAI ACGGC 7 cut(s) 801, 832, 860, 884, 926, 1250, 1405
BciT130I CCWGG 3 cut(s) 317, 938, 1322
BclI TGATCA 1 cut(s) 412
BcnI CCSGG 1 cut(s) 361
BcoDI GTCTC 4 cut(s) 344, 625, 1658, 1921
BcuI ACTAGT 1 cut(s) 1607
BfaI CTAG 5 cut(s) 702, 798, 1245, 1608, 2026
BfmI CTRYAG 1 cut(s) 774
BfoI RGCGCY 1 cut(s) 1307
BfuAI ACCTGC 2 cut(s) 1111, 1933
BglI GCCNNNNNGGC 1 cut(s) 517
BlpI GCTNAGC 1 cut(s) 521
Bme1390I CCNGG 4 cut(s) 317, 361, 938, 1322
Bme18I GGWCC 6 cut(s) 253, 319, 503, 677, 1135, 1185
BmeT110I CYCGRG 2 cut(s) 554, 809
BmgBI CACGTC 1 cut(s) 964
BmgT120I GGNCC 7 cut(s) 253, 319, 362, 503, 677, 1135, 1185
BmrFI CCNGG 4 cut(s) 317, 361, 938, 1322
BmsI GCATC 4 cut(s) 121, 1231, 1321, 1782
BoxI GACNNNNGTC 1 cut(s) 1212
BpiI GAAGAC 1 cut(s) 1604
BpmI CTGGAG 3 cut(s) 326, 1064, 1907
Bpu1102I GCTNAGC 1 cut(s) 521
Bpu14I TTCGAA 1 cut(s) 469
BpuEI CTTGAG 1 cut(s) 1517
BpuMI CCSGG 1 cut(s) 361
BsaHI GRCGYC 2 cut(s) 642, 1151
BsaI GGTCTC 1 cut(s) 1921
BsaJI CCNNGG 5 cut(s) 783, 984, 1522, 1619, 1983
BsaWI WCCGGW 8 cut(s) 255, 298, 380, 428, 500, 623, 649, 821
BsaXI ACNNNNNCTCC 4 cut(s) 410, 440, 1577, 1607
Bsc4I CCNNNNNNNGG 2 cut(s) 274, 1281
Bse118I RCCGGY 6 cut(s) 364, 500, 534, 638, 649, 821
Bse1I ACTGG 3 cut(s) 90, 595, 1451
Bse3DI GCAATG 2 cut(s) 506, 1802
BseAI TCCGGA 2 cut(s) 380, 623
BseBI CCWGG 3 cut(s) 317, 938, 1322
BseDI CCNNGG 5 cut(s) 783, 984, 1522, 1619, 1983
BseGI GGATG 5 cut(s) 110, 1246, 1312, 1497, 1993
BseLI CCNNNNNNNGG 2 cut(s) 274, 1281
BseMI GCAATG 2 cut(s) 506, 1802
BseMII CTCAG 6 cut(s) 96, 141, 326, 512, 806, 834
BseNI ACTGG 3 cut(s) 90, 595, 1451
BseRI GAGGAG 6 cut(s) 442, 656, 1052, 1355, 1640, 1643
BseSI GKGCMC 1 cut(s) 1779
BseXI GCAGC 5 cut(s) 186, 1404, 1633, 1771, 1869
BseYI CCCAGC 2 cut(s) 224, 1180
BsgI GTGCAG 2 cut(s) 1043, 1427
Bsh1236I CGCG 4 cut(s) 239, 804, 995, 1985
BshFI GGCC 7 cut(s) 364, 941, 1349, 1488, 1750, 1895, 1982
BshNI GGYRCC 1 cut(s) 1774
BshTI ACCGGT 3 cut(s) 500, 649, 821
BsiHKCI CYCGRG 2 cut(s) 554, 809
BslFI GGGAC 2 cut(s) 566, 1189
BslI CCNNNNNNNGG 2 cut(s) 274, 1281
BsmAI GTCTC 4 cut(s) 344, 625, 1658, 1921
BsmBI CGTCTC 1 cut(s) 625
BsmFI GGGAC 2 cut(s) 566, 1189
BsmI GAATGC 4 cut(s) 239, 442, 737, 1884
BsnI GGCC 7 cut(s) 364, 941, 1349, 1488, 1750, 1895, 1982
Bso31I GGTCTC 1 cut(s) 1921
BsoBI CYCGRG 2 cut(s) 554, 809
Bsp119I TTCGAA 1 cut(s) 469
Bsp1286I GDGCHC 1 cut(s) 1779
Bsp13I TCCGGA 2 cut(s) 380, 623
Bsp1720I GCTNAGC 1 cut(s) 521
Bsp19I CCATGG 1 cut(s) 1619
BspANI GGCC 7 cut(s) 364, 941, 1349, 1488, 1750, 1895, 1982
BspCNI CTCAG 6 cut(s) 95, 140, 327, 513, 807, 835
BspEI TCCGGA 2 cut(s) 380, 623
BspFNI CGCG 4 cut(s) 239, 804, 995, 1985
BspHI TCATGA 1 cut(s) 1828
BspMI ACCTGC 2 cut(s) 1111, 1933
BspPI GGATC 4 cut(s) 236, 285, 916, 2020
BspQI GCTCTTC 1 cut(s) 1079
BspT104I TTCGAA 1 cut(s) 469
BspT107I GGYRCC 1 cut(s) 1774
BspTNI GGTCTC 1 cut(s) 1921
BsrBI CCGCTC 3 cut(s) 525, 1089, 1330
BsrDI GCAATG 2 cut(s) 506, 1802
BsrFI RCCGGY 6 cut(s) 364, 500, 534, 638, 649, 821
BsrI ACTGG 3 cut(s) 90, 595, 1451
BssAI RCCGGY 6 cut(s) 364, 500, 534, 638, 649, 821
BssECI CCNNGG 5 cut(s) 783, 984, 1522, 1619, 1983
BssNI GRCGYC 2 cut(s) 642, 1151
BssT1I CCWWGG 1 cut(s) 1619
Bst2UI CCWGG 3 cut(s) 317, 938, 1322
Bst4CI ACNGT 6 cut(s) 580, 681, 750, 778, 1214, 1415
BstACI GRCGYC 2 cut(s) 642, 1151
BstAPI GCANNNNNTGC 1 cut(s) 732
BstBI TTCGAA 1 cut(s) 469
BstC8I GCNNGC 2 cut(s) 1008, 1111
BstDEI CTNAG 7 cut(s) 82, 127, 335, 521, 815, 843, 1765
BstDSI CCRYGG 4 cut(s) 783, 1522, 1619, 1983
BstENI CCTNNNNNAGG 1 cut(s) 1279
BstF5I GGATG 5 cut(s) 110, 1246, 1312, 1497, 1993
BstFNI CGCG 4 cut(s) 239, 804, 995, 1985
BstH2I RGCGCY 1 cut(s) 1307
BstHHI GCGC 9 cut(s) 142, 179, 239, 806, 864, 1006, 1120, 1306, 1483
BstMAI GTCTC 4 cut(s) 344, 625, 1658, 1921
BstNI CCWGG 3 cut(s) 317, 938, 1322
BstNSI RCATGY 1 cut(s) 1575
BstPAI GACNNNNGTC 1 cut(s) 1212
BstSCI CCNGG 4 cut(s) 315, 359, 936, 1320
BstSFI CTRYAG 1 cut(s) 774
BstSLI GKGCMC 1 cut(s) 1779
BstUI CGCG 4 cut(s) 239, 804, 995, 1985
BstV1I GCAGC 5 cut(s) 186, 1404, 1633, 1771, 1869
BstV2I GAAGAC 1 cut(s) 1604
BstX2I RGATCY 1 cut(s) 277
BstYI RGATCY 1 cut(s) 277
BsuRI GGCC 7 cut(s) 364, 941, 1349, 1488, 1750, 1895, 1982
BtgI CCRYGG 4 cut(s) 783, 1522, 1619, 1983
BtrI CACGTC 1 cut(s) 964
BtsCI GGATG 5 cut(s) 110, 1246, 1312, 1497, 1993
BtsIMutI CAGTG 3 cut(s) 105, 1444, 1578
BveI ACCTGC 2 cut(s) 1111, 1933
Cac8I GCNNGC 2 cut(s) 1008, 1111
CaiI CAGNNNCTG 1 cut(s) 134
CciI TCATGA 1 cut(s) 1828
CfoI GCGC 9 cut(s) 142, 179, 239, 806, 864, 1006, 1120, 1306, 1483
Cfr10I RCCGGY 6 cut(s) 364, 500, 534, 638, 649, 821
Cfr13I GGNCC 7 cut(s) 253, 319, 362, 503, 677, 1135, 1185
Cfr42I CCGCGG 1 cut(s) 1986
CpoI CGGWCCG 1 cut(s) 677
CseI GACGC 4 cut(s) 631, 1001, 1140, 1186
CsiI ACCWGGT 1 cut(s) 1320
Csp6I GTAC 3 cut(s) 647, 1126, 1260
CspAI ACCGGT 3 cut(s) 500, 649, 821
CspI CGGWCCG 1 cut(s) 677
CviAII CATG 7 cut(s) 1455, 1509, 1572, 1620, 1789, 1829, 2016
CviQI GTAC 3 cut(s) 647, 1126, 1260
DdeI CTNAG 7 cut(s) 82, 127, 335, 521, 815, 843, 1765
DrdI GACNNNNNNGTC 2 cut(s) 979, 1183
DseDI GACNNNNNNGTC 2 cut(s) 979, 1183
EaeI YGGCCR 3 cut(s) 939, 1893, 1980
EciI GGCGGA 4 cut(s) 539, 886, 1172, 1605
Eco130I CCWWGG 1 cut(s) 1619
Eco147I AGGCCT 2 cut(s) 1488, 1750
Eco31I GGTCTC 1 cut(s) 1921
Eco47I GGWCC 6 cut(s) 253, 319, 503, 677, 1135, 1185
Eco47III AGCGCT 1 cut(s) 1305
Eco57I CTGAAG 1 cut(s) 81
Eco88I CYCGRG 2 cut(s) 554, 809
EcoNI CCTNNNNNAGG 1 cut(s) 1279
EcoRII CCWGG 3 cut(s) 315, 936, 1320
EcoT14I CCWWGG 1 cut(s) 1619
EcoT22I ATGCAT 1 cut(s) 1714
ErhI CCWWGG 1 cut(s) 1619
Esp3I CGTCTC 1 cut(s) 625
FaeI CATG 7 cut(s) 1458, 1512, 1575, 1623, 1792, 1832, 2019
FaqI GGGAC 2 cut(s) 566, 1189
FatI CATG 7 cut(s) 1454, 1508, 1571, 1619, 1788, 1828, 2015
FauI CCCGC 4 cut(s) 320, 591, 1082, 1102
FauNDI CATATG 1 cut(s) 1714
FbaI TGATCA 1 cut(s) 412
FblI GTMKAC 1 cut(s) 773
FokI GGATG 5 cut(s) 97, 1253, 1299, 1484, 2000
FspBI CTAG 5 cut(s) 702, 798, 1245, 1608, 2026
GlaI GCGC 9 cut(s) 141, 178, 238, 805, 863, 1005, 1119, 1305, 1482
GsaI CCCAGC 2 cut(s) 228, 1184
GsuI CTGGAG 3 cut(s) 326, 1064, 1907
HaeII RGCGCY 1 cut(s) 1307
HaeIII GGCC 7 cut(s) 364, 941, 1349, 1488, 1750, 1895, 1982
HgaI GACGC 4 cut(s) 631, 1001, 1140, 1186
HhaI GCGC 9 cut(s) 142, 179, 239, 806, 864, 1006, 1120, 1306, 1483
Hin1I GRCGYC 2 cut(s) 642, 1151
Hin1II CATG 7 cut(s) 1458, 1512, 1575, 1623, 1792, 1832, 2019
Hin6I GCGC 9 cut(s) 140, 177, 237, 804, 862, 1004, 1118, 1304, 1481
HinP1I GCGC 9 cut(s) 140, 177, 237, 804, 862, 1004, 1118, 1304, 1481
HincII GTYRAC 1 cut(s) 840
HindII GTYRAC 1 cut(s) 840
HphI GGTGA 9 cut(s) 43, 349, 490, 628, 1066, 1093, 1677, 1813, 1859
Hpy166II GTNNAC 6 cut(s) 103, 774, 840, 1126, 1188, 1522
Hpy8I GTNNAC 6 cut(s) 103, 774, 840, 1126, 1188, 1522
Hpy99I CGWCG 5 cut(s) 647, 796, 995, 1156, 1759
HpyAV CCTTC 3 cut(s) 196, 1045, 1285
HpyCH4III ACNGT 6 cut(s) 580, 681, 750, 778, 1214, 1415
HpyCH4IV ACGT 4 cut(s) 618, 963, 1476, 1545
HpyCH4V TGCA 6 cut(s) 75, 1024, 1444, 1712, 1795, 1960
HpyF3I CTNAG 7 cut(s) 82, 127, 335, 521, 815, 843, 1765
HpySE526I ACGT 4 cut(s) 618, 963, 1476, 1545
Hsp92I GRCGYC 2 cut(s) 642, 1151
Hsp92II CATG 7 cut(s) 1458, 1512, 1575, 1623, 1792, 1832, 2019
HspAI GCGC 9 cut(s) 140, 177, 237, 804, 862, 1004, 1118, 1304, 1481
Kpn2I TCCGGA 2 cut(s) 380, 623
Ksp22I TGATCA 1 cut(s) 412
KspI CCGCGG 1 cut(s) 1986
LguI GCTCTTC 1 cut(s) 1079
Lsp1109I GCAGC 5 cut(s) 186, 1404, 1633, 1771, 1869
LweI GCATC 4 cut(s) 121, 1231, 1321, 1782
MabI ACCWGGT 1 cut(s) 1320
MaeI CTAG 5 cut(s) 702, 798, 1245, 1608, 2026
MaeII ACGT 4 cut(s) 618, 963, 1476, 1545
MaeIII GTNAC 4 cut(s) 85, 652, 851, 1576
MbiI CCGCTC 3 cut(s) 525, 1089, 1330
MflI RGATCY 1 cut(s) 277
MhlI GDGCHC 1 cut(s) 1779
MlsI TGGCCA 1 cut(s) 1895
MluNI TGGCCA 1 cut(s) 1895
MlyI GAGTC 7 cut(s) 339, 344, 346, 378, 655, 760, 1660
MmeI TCCRAC 4 cut(s) 683, 1233, 1566, 1584
Mox20I TGGCCA 1 cut(s) 1895
Mph1103I ATGCAT 1 cut(s) 1714
MroI TCCGGA 2 cut(s) 380, 623
MroXI GAANNNNTTC 2 cut(s) 566, 1912
MscI TGGCCA 1 cut(s) 1895
MseI TTAA 4 cut(s) 615, 1230, 1968, 2006
MslI CAYNNNNRTG 1 cut(s) 1833
Msp20I TGGCCA 1 cut(s) 1895
MspA1I CMGCKG 2 cut(s) 1141, 1985
MspR9I CCNGG 4 cut(s) 317, 361, 938, 1322
Mva1269I GAATGC 4 cut(s) 239, 442, 737, 1884
MvaI CCWGG 3 cut(s) 317, 938, 1322
MvnI CGCG 4 cut(s) 239, 804, 995, 1985
NciI CCSGG 1 cut(s) 361
NcoI CCATGG 1 cut(s) 1619
NdeI CATATG 1 cut(s) 1714
NlaIII CATG 7 cut(s) 1458, 1512, 1575, 1623, 1792, 1832, 2019
NmeAIII GCCGAG 1 cut(s) 261
NmuCI GTSAC 3 cut(s) 652, 851, 1576
NsiI ATGCAT 1 cut(s) 1714
NspI RCATGY 1 cut(s) 1575
NspV TTCGAA 1 cut(s) 469
PaeR7I CTCGAG 1 cut(s) 554
PagI TCATGA 1 cut(s) 1828
PaqCI CACCTGC 1 cut(s) 1111
PceI AGGCCT 2 cut(s) 1488, 1750
PciSI GCTCTTC 1 cut(s) 1079
PcsI WCGNNNNNNNCGW 1 cut(s) 939
PctI GAATGC 4 cut(s) 239, 442, 737, 1884
PdmI GAANNNNTTC 2 cut(s) 566, 1912
PfeI GAWTC 5 cut(s) 1072, 1292, 1640, 1820, 1850
PflFI GACNNNGTC 1 cut(s) 769
PflMI CCANNNNNTGG 1 cut(s) 274
PinAI ACCGGT 3 cut(s) 500, 649, 821
PleI GAGTC 7 cut(s) 338, 344, 345, 378, 655, 760, 1660
PpsI GAGTC 7 cut(s) 338, 344, 345, 378, 655, 760, 1660
PshAI GACNNNNGTC 1 cut(s) 1212
PsiI TTATAA 1 cut(s) 489
Psp6I CCWGG 3 cut(s) 315, 936, 1320
PspFI CCCAGC 2 cut(s) 224, 1180
PspGI CCWGG 3 cut(s) 315, 936, 1320
PspPI GGNCC 7 cut(s) 253, 319, 362, 503, 677, 1135, 1185
PspXI VCTCGAGB 1 cut(s) 554
PsrI GAACNNNNNNTAC 2 cut(s) 524, 556
PstNI CAGNNNCTG 1 cut(s) 134
PsuI RGATCY 1 cut(s) 277
PsyI GACNNNGTC 1 cut(s) 769
PvuII CAGCTG 1 cut(s) 1141
RsaI GTAC 3 cut(s) 648, 1127, 1261
RsaNI GTAC 3 cut(s) 647, 1126, 1260
RseI CAYNNNNRTG 1 cut(s) 1833
Rsr2I CGGWCCG 1 cut(s) 677
RsrII CGGWCCG 1 cut(s) 677
SacII CCGCGG 1 cut(s) 1986
SapI GCTCTTC 1 cut(s) 1079
SaqAI TTAA 4 cut(s) 615, 1230, 1968, 2006
Sau96I GGNCC 7 cut(s) 253, 319, 362, 503, 677, 1135, 1185
SchI GAGTC 7 cut(s) 339, 344, 346, 378, 655, 760, 1660
ScrFI CCNGG 4 cut(s) 317, 361, 938, 1322
SduI GDGCHC 1 cut(s) 1779
SexAI ACCWGGT 1 cut(s) 1320
SfaNI GCATC 4 cut(s) 121, 1231, 1321, 1782
SfcI CTRYAG 1 cut(s) 774
Sfr274I CTCGAG 1 cut(s) 554
Sfr303I CCGCGG 1 cut(s) 1986
SfuI TTCGAA 1 cut(s) 469
SgrAI CRCCGGYG 1 cut(s) 638
SgrBI CCGCGG 1 cut(s) 1986
SinI GGWCC 6 cut(s) 253, 319, 503, 677, 1135, 1185
SlaI CTCGAG 1 cut(s) 554
SmiMI CAYNNNNRTG 1 cut(s) 1833
SmlI CTYRAG 2 cut(s) 554, 1532
SmoI CTYRAG 2 cut(s) 554, 1532
SpeI ACTAGT 1 cut(s) 1607
SseBI AGGCCT 2 cut(s) 1488, 1750
SspI AATATT 1 cut(s) 209
SspMI CTAG 5 cut(s) 702, 798, 1245, 1608, 2026
StuI AGGCCT 2 cut(s) 1488, 1750
StyD4I CCNGG 4 cut(s) 315, 359, 936, 1320
StyI CCWWGG 1 cut(s) 1619
TaaI ACNGT 6 cut(s) 580, 681, 750, 778, 1214, 1415
TaiI ACGT 4 cut(s) 621, 966, 1479, 1548
TaqI TCGA 6 cut(s) 231, 245, 469, 555, 920, 1278
TaqII GACCGA 1 cut(s) 1945
TatI WGTACW 1 cut(s) 1125
TauI GCSGC 8 cut(s) 714, 998, 1001, 1004, 1013, 1016, 1019, 1985
TfiI GAWTC 5 cut(s) 1072, 1292, 1640, 1820, 1850
Tru1I TTAA 4 cut(s) 615, 1230, 1968, 2006
Tru9I TTAA 4 cut(s) 615, 1230, 1968, 2006
TscAI CASTG 3 cut(s) 105, 1451, 1585
TseFI GTSAC 3 cut(s) 652, 851, 1576
TseI GCWGC 5 cut(s) 174, 1392, 1646, 1759, 1882
Tsp45I GTSAC 3 cut(s) 652, 851, 1576
TspDTI ATGAA 1 cut(s) 2004
TspGWI ACGGA 8 cut(s) 588, 746, 759, 780, 989, 1539, 1585, 1743
TspRI CASTG 3 cut(s) 105, 1451, 1585
Tth111I GACNNNGTC 1 cut(s) 769
Van91I CCANNNNNTGG 1 cut(s) 274
VpaK11BI GGWCC 6 cut(s) 253, 319, 503, 677, 1135, 1185
XagI CCTNNNNNAGG 1 cut(s) 1279
XceI RCATGY 1 cut(s) 1575
XcmI CCANNNNNNNNNTGG 1 cut(s) 513
XhoI CTCGAG 1 cut(s) 554
XmiI GTMKAC 1 cut(s) 773
XmnI GAANNNNTTC 2 cut(s) 566, 1912
XspI CTAG 5 cut(s) 702, 798, 1245, 1608, 2026
Zsp2I ATGCAT 1 cut(s) 1714
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.