Rh6DG478200
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0011041
Physical Location & Seq
Reverse (-)
64329877 .. 64333681
3805 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG478200.1

Sequence Viewer

Length: 2013 bp
ATGCTCATCAACAAATGGAAACTACCCTCATTTCCTCTGTTTCTACTATTCGCCTCTGTTTTCCTCTCATTTTGCACCACCTCAGTTACCAGTTCTAGTTCTTCAGTGAACTCATCAAACCCCTCAGATGCTGCTGCGCTTCTTGATTTCAAAGCAAAAGCTGATTTGAGCAGCGCACTTCCCTTCTCAAACACCACCCTCCATTTCTGTCAATGGGCTGGGATCGAATGCGCGAAATCGAGAGTGGTCCGGTTAGTAATCCAAGACTTGGATCTCGGCGGTGTTTTCGCACCGGACACTCTCACCCGCCTGGACCAACTCCGAGTACTCAGTCTCCAGAATGACTCGCTCACCGGACCGGTTCCCGATCTCTCCGGACTCATCAACCTCAAAACCCTCTTCCTCGATCACAACTCATTCTCCGGTTCTCTTCCGCATTCCCTCTCCTCTCTCCATAGGCTTCGAACCCTTGATTTCTCTTATAACAACCTCACCGGTCCATTGCCCGAATGGCTGAGCGGTCTGAACCGGCTCTACTATCTCCGCCTCGAGTGGAACCGGTTCAACGGAACCGTCCCGCCTCTGAACCAGTCCTCTCTCCAAACCTTCAACGTCTCCGGAAACAACCTCACCGGCGTCGTACCGGTCACTCCGACTCTCCTCCGCTTCGGACCGTCATCGTTCTTGTGGAACCCTAGTCTTTGCGGCGAGATCATTCGCATAGAATGCCACCCAAACGCACCGTTTTTCCGTCCGGCGACTCCGTCTACAGTTCCCGCAGCTCCGTCGCCTAGTCGCGCACTCGGGCTGAGAACCGCTCAGGGCGTTGAGTTGACTCAGCCGTGTCACAAGAAGCACAAGAGAACCGCCGTCCTCATCGGCTTCTCTTCCGCCGTGTTCGTCCTGATCTGCTCGATCCTCTGCTTCGTCCTGGCCGTCAAGAAACAGAGGAAGCACGTAAAAAAGACGGACTTGTCCTCCTCGTCGGACGACGCGGCGGCGGCGCAGGCGGTGCAGATGGAGCAGGAGGAGCTGGAGCAGAAGGTGAAGAGAGTTCAGGGGATTCAGGTGGTGAAGAGCGGGAGCTTGTTGTTCTGTGCGGGCGAGGCGCAGGTGTACTCGCTGGACCAGCTGATGAGGGCGTCGGCGGAGCTTTTGGGAAGAGGGGCGCTGGGATCCACCTACAAGGCGGTGCTGGACAACCGTCTGATCGTCTGCGTTAAACGGCTGGATGCTGGTGTGTTGGAGGGTACGGGTAGGGAAGCCTTCGAGAGGCACTTGGAATCGGTGGGAGGGCTCCGGCATCCGAACCTGGTTCCGCTCCGAGCTTATTTTCAGGCCAAAGAAGAGAGGCTCCTCATCTACGATTACCAGCCCAATGGCAGCCTCTTCTCTCTCATTCATGGTTCAAAATCAACGAGGGCAAAGCCTCTGCACTGGACATCATGCTTGAAATTAGCAGAGGACGTAGCGCAAGGCCTCTCTTACATCCACCAAGCATGGAGGCTTGTCCACGGAAATCTCAAGTCCGCCAACGTGCTACTTGGCTCCGACTTTGAGGCATGTGTCACTGACTACTGCCTCTCCGTTCTCGCTACTAATCTTCCGCCATGGGAGGAGGAGAACCCTGATTCTGCTGCCTATAAAGCACCAGAGACTCGCCATTCAAATCACTCACCAACTCCCAAGTCTGATGTGTATGCATATGGTATTTTGCTGGTGGAGCTTCTCACGGGGAGGCCTCCGTCGCAGCACTTAGTTTCGGTTCCCCTGAATGACATGATGCAATGGGTGAGGTCCGTGAGGGAAGAATCAGATGATGGTGGTGGTGGGGATTCAGAAGAGAGTGGTGATAAGATGGGAATGCTGCTGGACGTGGCCATAACTTGTAGATCACCTTCGCCGGAGCAGAGACCGACTATGTGGCAGGTTTTGAAGATGTTGCAGGAGATTAAACAGACTGTGGCCGCGGATGAAACTGAGACCGAGTTAATGGGATTATGTCCTGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

670

Amino Acids

73.5

Weight (kDa)

6.98

Isoelectric Point (pI)

48.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 101 - 187 2.1e-06 Leucine-rich repeat region
LRR_8 PF13855 129 - 188 2.2e-09 Leucine rich repeat
Pkinase PF00069 384 - 646 4e-30 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 384 - 647 4.8e-28 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G43020
fragaria_vesca FvH4_2g33931 FvH4_2g33931
malus_domestica MD08G1095100.v1.1 MD15G1078000.v1.1
prunus_persica Prupe.1G431300_v2.0.a1
pyrus_communis pycom08g07710 pycom15g07280
rosa_chinensis RchiOBHm_Chr6g0308471
rosa_laevigata RLG00000010640
rosa_multiflora Rmu_co8342223.1_g000001 Rmu_sc0001485.1_g000009 Rmu_sc0011796.1_g000010
rosa_roxburghii Rroxscaffold_7G00160100
rosa_rugosa Rorug06G0367000
rosa_samantha Rh6AG476800 Rh6BG487000 Rh6CG492100 Rh6DG478200
rosa_wichuraiana Rw6G041590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 483
AarI CACCTGC 1 cut(s) 1102
AasI GACNNNNNNGTC 1 cut(s) 973
Acc36I ACCTGC 2 cut(s) 1102, 1918
AccB7I CCANNNNNTGG 1 cut(s) 268
AccBSI CCGCTC 4 cut(s) 519, 818, 1080, 1321
AccI GTMKAC 1 cut(s) 767
AccII CGCG 4 cut(s) 233, 798, 995, 1970
AccIII TCCGGA 2 cut(s) 374, 617
AclWI GGATC 5 cut(s) 230, 279, 910, 1170, 1183
AcoI YGGCCR 3 cut(s) 933, 1878, 1965
AcuI CTGAAG 1 cut(s) 87
AcyI GRCGYC 2 cut(s) 636, 1142
AfaI GTAC 4 cut(s) 327, 642, 1118, 1252
AfiI CCNNNNNNNGG 2 cut(s) 268, 1272
AgeI ACCGGT 4 cut(s) 358, 494, 558, 643
AgsI TTSAA 7 cut(s) 151, 565, 610, 1410, 1453, 1668, 1936
AjiI CACGTC 1 cut(s) 1876
AjnI CCWGG 4 cut(s) 309, 930, 1311, 2005
AluBI AGCT 8 cut(s) 161, 782, 1033, 1086, 1132, 1153, 1328, 1726
AluI AGCT 8 cut(s) 161, 782, 1033, 1086, 1132, 1153, 1328, 1726
Alw26I GTCTC 5 cut(s) 338, 619, 1649, 1906, 1976
AlwI GGATC 5 cut(s) 230, 279, 910, 1170, 1183
AlwNI CAGNNNCTG 1 cut(s) 131
Ama87I CYCGRG 2 cut(s) 548, 803
Aor13HI TCCGGA 2 cut(s) 374, 617
AoxI GGCC 6 cut(s) 933, 1338, 1477, 1739, 1878, 1965
ApeKI GCWGC 8 cut(s) 131, 134, 171, 779, 1383, 1637, 1750, 1867
AsiGI ACCGGT 4 cut(s) 358, 494, 558, 643
Asp700I GAANNNNTTC 1 cut(s) 560
AspLEI GCGC 8 cut(s) 139, 176, 233, 800, 1006, 1111, 1171, 1474
AspS9I GGNCC 7 cut(s) 247, 313, 356, 497, 671, 1126, 1797
AsuII TTCGAA 1 cut(s) 463
AvaI CYCGRG 2 cut(s) 548, 803
AvaII GGWCC 7 cut(s) 247, 313, 356, 497, 671, 1126, 1797
BalI TGGCCA 1 cut(s) 1880
BamHI GGATCC 1 cut(s) 1175
BanII GRGCYC 1 cut(s) 1299
BarI GAAGNNNNNNTAC 2 cut(s) 1882, 1914
BbvI GCAGC 8 cut(s) 118, 121, 183, 791, 1395, 1624, 1762, 1854
BccI CCATC 3 cut(s) 1012, 1814, 1852
BceAI ACGGC 5 cut(s) 826, 854, 878, 920, 1241
BcgI CGANNNNNNTGC 2 cut(s) 768, 802
BciT130I CCWGG 4 cut(s) 311, 932, 1313, 2007
BcoDI GTCTC 5 cut(s) 338, 619, 1649, 1906, 1976
BfaI CTAG 4 cut(s) 96, 696, 792, 2011
BfmI CTRYAG 1 cut(s) 768
BfoI RGCGCY 1 cut(s) 1172
BfuAI ACCTGC 2 cut(s) 1102, 1918
BglI GCCNNNNNGGC 1 cut(s) 511
BlpI GCTNAGC 1 cut(s) 515
BmcAI AGTACT 1 cut(s) 327
Bme1390I CCNGG 4 cut(s) 311, 932, 1313, 2007
Bme18I GGWCC 7 cut(s) 247, 313, 356, 497, 671, 1126, 1797
BmeT110I CYCGRG 2 cut(s) 548, 803
BmgBI CACGTC 1 cut(s) 1876
BmgT120I GGNCC 7 cut(s) 247, 313, 356, 497, 671, 1126, 1797
BmrFI CCNGG 4 cut(s) 311, 932, 1313, 2007
BmsI GCATC 4 cut(s) 118, 1222, 1312, 1773
BoxI GACNNNNGTC 1 cut(s) 1203
BplI GAGNNNNNCTC 2 cut(s) 802, 834
BpmI CTGGAG 2 cut(s) 320, 1055
Bpu10I CCTNAGC 1 cut(s) 819
Bpu1102I GCTNAGC 1 cut(s) 515
Bpu14I TTCGAA 1 cut(s) 463
BpuEI CTTGAG 1 cut(s) 1508
BsaAI YACGTR 1 cut(s) 958
BsaHI GRCGYC 2 cut(s) 636, 1142
BsaI GGTCTC 2 cut(s) 1906, 1976
BsaJI CCNNGG 3 cut(s) 1513, 1610, 1968
BsaXI ACNNNNNCTCC 8 cut(s) 318, 348, 404, 434, 962, 992, 1568, 1598
Bsc4I CCNNNNNNNGG 2 cut(s) 268, 1272
Bse118I RCCGGY 6 cut(s) 358, 494, 528, 558, 632, 643
Bse1I ACTGG 3 cut(s) 90, 589, 1442
Bse3DI GCAATG 2 cut(s) 500, 1793
BseAI TCCGGA 2 cut(s) 374, 617
BseBI CCWGG 4 cut(s) 311, 932, 1313, 2007
BseDI CCNNGG 3 cut(s) 1513, 1610, 1968
BseGI GGATG 4 cut(s) 1237, 1303, 1488, 1978
BseLI CCNNNNNNNGG 2 cut(s) 268, 1272
BseMI GCAATG 2 cut(s) 500, 1793
BseMII CTCAG 8 cut(s) 96, 138, 343, 506, 800, 833, 851, 1971
BseNI ACTGG 3 cut(s) 90, 589, 1442
BseRI GAGGAG 7 cut(s) 436, 650, 970, 1043, 1346, 1631, 1634
BseXI GCAGC 8 cut(s) 118, 121, 183, 791, 1395, 1624, 1762, 1854
BseYI CCCAGC 2 cut(s) 218, 1171
BsgI GTGCAG 2 cut(s) 1034, 1418
Bsh1236I CGCG 4 cut(s) 233, 798, 995, 1970
BshFI GGCC 6 cut(s) 935, 1340, 1479, 1741, 1880, 1967
BshTI ACCGGT 4 cut(s) 358, 494, 558, 643
BsiHKCI CYCGRG 2 cut(s) 548, 803
BslFI GGGAC 1 cut(s) 560
BslI CCNNNNNNNGG 2 cut(s) 268, 1272
BsmAI GTCTC 5 cut(s) 338, 619, 1649, 1906, 1976
BsmBI CGTCTC 1 cut(s) 619
BsmFI GGGAC 1 cut(s) 560
BsmI GAATGC 4 cut(s) 233, 436, 731, 1869
BsnI GGCC 6 cut(s) 935, 1340, 1479, 1741, 1880, 1967
Bso31I GGTCTC 2 cut(s) 1906, 1976
BsoBI CYCGRG 2 cut(s) 548, 803
Bsp119I TTCGAA 1 cut(s) 463
Bsp1286I GDGCHC 1 cut(s) 1299
Bsp13I TCCGGA 2 cut(s) 374, 617
Bsp1720I GCTNAGC 1 cut(s) 515
Bsp19I CCATGG 1 cut(s) 1610
BspANI GGCC 6 cut(s) 935, 1340, 1479, 1741, 1880, 1967
BspCNI CTCAG 8 cut(s) 95, 137, 342, 507, 801, 832, 850, 1972
BspEI TCCGGA 2 cut(s) 374, 617
BspFNI CGCG 4 cut(s) 233, 798, 995, 1970
BspMI ACCTGC 2 cut(s) 1102, 1918
BspPI GGATC 5 cut(s) 230, 279, 910, 1170, 1183
BspQI GCTCTTC 1 cut(s) 1070
BspT104I TTCGAA 1 cut(s) 463
BspTNI GGTCTC 2 cut(s) 1906, 1976
BsrBI CCGCTC 4 cut(s) 519, 818, 1080, 1321
BsrDI GCAATG 2 cut(s) 500, 1793
BsrFI RCCGGY 6 cut(s) 358, 494, 528, 558, 632, 643
BsrI ACTGG 3 cut(s) 90, 589, 1442
BssAI RCCGGY 6 cut(s) 358, 494, 528, 558, 632, 643
BssECI CCNNGG 3 cut(s) 1513, 1610, 1968
BssNI GRCGYC 2 cut(s) 636, 1142
BssT1I CCWWGG 1 cut(s) 1610
Bst2UI CCWGG 4 cut(s) 311, 932, 1313, 2007
Bst4CI ACNGT 6 cut(s) 574, 675, 744, 772, 1205, 1963
Bst6I CTCTTC 9 cut(s) 404, 435, 892, 1043, 1070, 1156, 1341, 1394, 1836
BstACI GRCGYC 2 cut(s) 636, 1142
BstAPI GCANNNNNTGC 2 cut(s) 726, 1012
BstBAI YACGTR 1 cut(s) 958
BstBI TTCGAA 1 cut(s) 463
BstC8I GCNNGC 2 cut(s) 1008, 1102
BstDEI CTNAG 9 cut(s) 82, 124, 329, 515, 809, 819, 837, 1756, 1980
BstDSI CCRYGG 3 cut(s) 1513, 1610, 1968
BstENI CCTNNNNNAGG 1 cut(s) 1270
BstF5I GGATG 4 cut(s) 1237, 1303, 1488, 1978
BstFNI CGCG 4 cut(s) 233, 798, 995, 1970
BstH2I RGCGCY 1 cut(s) 1172
BstHHI GCGC 8 cut(s) 139, 176, 233, 800, 1006, 1111, 1171, 1474
BstMAI GTCTC 5 cut(s) 338, 619, 1649, 1906, 1976
BstNI CCWGG 4 cut(s) 311, 932, 1313, 2007
BstNSI RCATGY 1 cut(s) 1566
BstPAI GACNNNNGTC 1 cut(s) 1203
BstSCI CCNGG 4 cut(s) 309, 930, 1311, 2005
BstSFI CTRYAG 1 cut(s) 768
BstUI CGCG 4 cut(s) 233, 798, 995, 1970
BstV1I GCAGC 8 cut(s) 118, 121, 183, 791, 1395, 1624, 1762, 1854
BstX2I RGATCY 2 cut(s) 271, 1175
BstXI CCANNNNNNTGG 1 cut(s) 1379
BstYI RGATCY 2 cut(s) 271, 1175
BsuRI GGCC 6 cut(s) 935, 1340, 1479, 1741, 1880, 1967
BtgI CCRYGG 3 cut(s) 1513, 1610, 1968
BtrI CACGTC 1 cut(s) 1876
BtsCI GGATG 4 cut(s) 1237, 1303, 1488, 1978
BtsIMutI CAGTG 3 cut(s) 111, 1435, 1569
BveI ACCTGC 2 cut(s) 1102, 1918
Cac8I GCNNGC 2 cut(s) 1008, 1102
CaiI CAGNNNCTG 1 cut(s) 131
CfoI GCGC 8 cut(s) 139, 176, 233, 800, 1006, 1111, 1171, 1474
Cfr10I RCCGGY 6 cut(s) 358, 494, 528, 558, 632, 643
Cfr13I GGNCC 7 cut(s) 247, 313, 356, 497, 671, 1126, 1797
Cfr42I CCGCGG 1 cut(s) 1971
CpoI CGGWCCG 2 cut(s) 356, 671
CseI GACGC 3 cut(s) 625, 1001, 1131
CsiI ACCWGGT 1 cut(s) 1311
Csp6I GTAC 4 cut(s) 326, 641, 1117, 1251
CspAI ACCGGT 4 cut(s) 358, 494, 558, 643
CspI CGGWCCG 2 cut(s) 356, 671
CviAII CATG 6 cut(s) 1403, 1446, 1500, 1563, 1611, 1780
CviQI GTAC 4 cut(s) 326, 641, 1117, 1251
DdeI CTNAG 9 cut(s) 82, 124, 329, 515, 809, 819, 837, 1756, 1980
DrdI GACNNNNNNGTC 1 cut(s) 973
DseDI GACNNNNNNGTC 1 cut(s) 973
EaeI YGGCCR 3 cut(s) 933, 1878, 1965
Eam1104I CTCTTC 9 cut(s) 404, 435, 892, 1043, 1070, 1156, 1341, 1394, 1836
EarI CTCTTC 9 cut(s) 404, 435, 892, 1043, 1070, 1156, 1341, 1394, 1836
EciI GGCGGA 5 cut(s) 533, 880, 1163, 1519, 1596
Eco130I CCWWGG 1 cut(s) 1610
Eco147I AGGCCT 2 cut(s) 1479, 1741
Eco24I GRGCYC 1 cut(s) 1299
Eco31I GGTCTC 2 cut(s) 1906, 1976
Eco47I GGWCC 7 cut(s) 247, 313, 356, 497, 671, 1126, 1797
Eco57I CTGAAG 1 cut(s) 87
Eco88I CYCGRG 2 cut(s) 548, 803
EcoNI CCTNNNNNAGG 1 cut(s) 1270
EcoRII CCWGG 4 cut(s) 309, 930, 1311, 2005
EcoT14I CCWWGG 1 cut(s) 1610
EcoT22I ATGCAT 1 cut(s) 1705
EcoT38I GRGCYC 1 cut(s) 1299
ErhI CCWWGG 1 cut(s) 1610
Esp3I CGTCTC 1 cut(s) 619
FaeI CATG 6 cut(s) 1406, 1449, 1503, 1566, 1614, 1783
FalI AAGNNNNNCTT 2 cut(s) 956, 988
FaqI GGGAC 1 cut(s) 560
FatI CATG 6 cut(s) 1402, 1445, 1499, 1562, 1610, 1779
FauI CCCGC 5 cut(s) 314, 585, 784, 1073, 1093
FauNDI CATATG 1 cut(s) 1705
FblI GTMKAC 1 cut(s) 767
FokI GGATG 4 cut(s) 1244, 1290, 1475, 1985
FriOI GRGCYC 1 cut(s) 1299
FspBI CTAG 4 cut(s) 96, 696, 792, 2011
GlaI GCGC 8 cut(s) 138, 175, 232, 799, 1005, 1110, 1170, 1473
GsaI CCCAGC 2 cut(s) 222, 1175
GsuI CTGGAG 2 cut(s) 320, 1055
HaeII RGCGCY 1 cut(s) 1172
HaeIII GGCC 6 cut(s) 935, 1340, 1479, 1741, 1880, 1967
HgaI GACGC 3 cut(s) 625, 1001, 1131
HhaI GCGC 8 cut(s) 139, 176, 233, 800, 1006, 1111, 1171, 1474
Hin1I GRCGYC 2 cut(s) 636, 1142
Hin1II CATG 6 cut(s) 1406, 1449, 1503, 1566, 1614, 1783
Hin6I GCGC 8 cut(s) 137, 174, 231, 798, 1004, 1109, 1169, 1472
HinP1I GCGC 8 cut(s) 137, 174, 231, 798, 1004, 1109, 1169, 1472
HincII GTYRAC 1 cut(s) 834
HindII GTYRAC 1 cut(s) 834
Hpy166II GTNNAC 5 cut(s) 109, 768, 834, 1117, 1513
Hpy188III TCNNGA 9 cut(s) 143, 240, 337, 365, 375, 618, 904, 940, 1270
Hpy8I GTNNAC 5 cut(s) 109, 768, 834, 1117, 1513
Hpy99I CGWCG 6 cut(s) 641, 790, 988, 995, 1147, 1750
HpyAV CCTTC 5 cut(s) 193, 616, 1036, 1276, 1908
HpyCH4III ACNGT 6 cut(s) 574, 675, 744, 772, 1205, 1963
HpyCH4IV ACGT 5 cut(s) 612, 957, 1467, 1536, 1875
HpyCH4V TGCA 6 cut(s) 75, 1015, 1435, 1703, 1786, 1945
HpyF3I CTNAG 9 cut(s) 82, 124, 329, 515, 809, 819, 837, 1756, 1980
HpySE526I ACGT 5 cut(s) 612, 957, 1467, 1536, 1875
Hsp92I GRCGYC 2 cut(s) 636, 1142
Hsp92II CATG 6 cut(s) 1406, 1449, 1503, 1566, 1614, 1783
HspAI GCGC 8 cut(s) 137, 174, 231, 798, 1004, 1109, 1169, 1472
Kpn2I TCCGGA 2 cut(s) 374, 617
KspI CCGCGG 1 cut(s) 1971
LguI GCTCTTC 1 cut(s) 1070
Lsp1109I GCAGC 8 cut(s) 118, 121, 183, 791, 1395, 1624, 1762, 1854
LweI GCATC 4 cut(s) 118, 1222, 1312, 1773
MabI ACCWGGT 1 cut(s) 1311
MaeI CTAG 4 cut(s) 96, 696, 792, 2011
MaeII ACGT 5 cut(s) 612, 957, 1467, 1536, 1875
MaeIII GTNAC 4 cut(s) 85, 646, 845, 1567
MbiI CCGCTC 4 cut(s) 519, 818, 1080, 1321
MflI RGATCY 2 cut(s) 271, 1175
MhlI GDGCHC 1 cut(s) 1299
MlsI TGGCCA 1 cut(s) 1880
MluCI AATT 1 cut(s) 1454
MluNI TGGCCA 1 cut(s) 1880
MlyI GAGTC 6 cut(s) 338, 372, 649, 754, 829, 1651
MmeI TCCRAC 4 cut(s) 677, 966, 1224, 1575
Mox20I TGGCCA 1 cut(s) 1880
Mph1103I ATGCAT 1 cut(s) 1705
MroI TCCGGA 2 cut(s) 374, 617
MroXI GAANNNNTTC 1 cut(s) 560
MscI TGGCCA 1 cut(s) 1880
MseI TTAA 3 cut(s) 1221, 1953, 1991
Msp20I TGGCCA 1 cut(s) 1880
MspA1I CMGCKG 2 cut(s) 1132, 1970
MspR9I CCNGG 4 cut(s) 311, 932, 1313, 2007
Mva1269I GAATGC 4 cut(s) 233, 436, 731, 1869
MvaI CCWGG 4 cut(s) 311, 932, 1313, 2007
MvnI CGCG 4 cut(s) 233, 798, 995, 1970
NcoI CCATGG 1 cut(s) 1610
NdeI CATATG 1 cut(s) 1705
NlaIII CATG 6 cut(s) 1406, 1449, 1503, 1566, 1614, 1783
NmeAIII GCCGAG 1 cut(s) 255
NmuCI GTSAC 3 cut(s) 646, 845, 1567
NsiI ATGCAT 1 cut(s) 1705
NspI RCATGY 1 cut(s) 1566
NspV TTCGAA 1 cut(s) 463
PaeR7I CTCGAG 1 cut(s) 548
PaqCI CACCTGC 1 cut(s) 1102
PceI AGGCCT 2 cut(s) 1479, 1741
PciSI GCTCTTC 1 cut(s) 1070
PcsI WCGNNNNNNNCGW 1 cut(s) 933
PctI GAATGC 4 cut(s) 233, 436, 731, 1869
PdmI GAANNNNTTC 1 cut(s) 560
PfeI GAWTC 5 cut(s) 1063, 1283, 1631, 1811, 1835
PflFI GACNNNGTC 1 cut(s) 763
PflMI CCANNNNNTGG 1 cut(s) 268
PinAI ACCGGT 4 cut(s) 358, 494, 558, 643
PleI GAGTC 6 cut(s) 338, 372, 649, 754, 829, 1651
PpsI GAGTC 6 cut(s) 338, 372, 649, 754, 829, 1651
Ppu21I YACGTR 1 cut(s) 958
PshAI GACNNNNGTC 1 cut(s) 1203
PsiI TTATAA 1 cut(s) 483
Psp6I CCWGG 4 cut(s) 309, 930, 1311, 2005
PspFI CCCAGC 2 cut(s) 218, 1171
PspGI CCWGG 4 cut(s) 309, 930, 1311, 2005
PspPI GGNCC 7 cut(s) 247, 313, 356, 497, 671, 1126, 1797
PspXI VCTCGAGB 1 cut(s) 548
PsrI GAACNNNNNNTAC 2 cut(s) 518, 550
PstNI CAGNNNCTG 1 cut(s) 131
PsuI RGATCY 2 cut(s) 271, 1175
PsyI GACNNNGTC 1 cut(s) 763
PvuII CAGCTG 1 cut(s) 1132
RsaI GTAC 4 cut(s) 327, 642, 1118, 1252
RsaNI GTAC 4 cut(s) 326, 641, 1117, 1251
Rsr2I CGGWCCG 2 cut(s) 356, 671
RsrII CGGWCCG 2 cut(s) 356, 671
SacII CCGCGG 1 cut(s) 1971
SapI GCTCTTC 1 cut(s) 1070
SaqAI TTAA 3 cut(s) 1221, 1953, 1991
Sau96I GGNCC 7 cut(s) 247, 313, 356, 497, 671, 1126, 1797
ScaI AGTACT 1 cut(s) 327
SchI GAGTC 6 cut(s) 338, 372, 649, 754, 829, 1651
ScrFI CCNGG 4 cut(s) 311, 932, 1313, 2007
SduI GDGCHC 1 cut(s) 1299
SexAI ACCWGGT 1 cut(s) 1311
SfaNI GCATC 4 cut(s) 118, 1222, 1312, 1773
SfcI CTRYAG 1 cut(s) 768
Sfr274I CTCGAG 1 cut(s) 548
Sfr303I CCGCGG 1 cut(s) 1971
SfuI TTCGAA 1 cut(s) 463
SgrAI CRCCGGYG 1 cut(s) 632
SgrBI CCGCGG 1 cut(s) 1971
SinI GGWCC 7 cut(s) 247, 313, 356, 497, 671, 1126, 1797
SlaI CTCGAG 1 cut(s) 548
SmlI CTYRAG 2 cut(s) 548, 1523
SmoI CTYRAG 2 cut(s) 548, 1523
Sse9I AATT 1 cut(s) 1454
SseBI AGGCCT 2 cut(s) 1479, 1741
SspMI CTAG 4 cut(s) 96, 696, 792, 2011
StuI AGGCCT 2 cut(s) 1479, 1741
StyD4I CCNGG 4 cut(s) 309, 930, 1311, 2005
StyI CCWWGG 1 cut(s) 1610
TaaI ACNGT 6 cut(s) 574, 675, 744, 772, 1205, 1963
TaiI ACGT 5 cut(s) 615, 960, 1470, 1539, 1878
TaqI TCGA 7 cut(s) 225, 239, 405, 463, 549, 914, 1269
TaqII GACCGA 2 cut(s) 1930, 2000
TasI AATT 1 cut(s) 1454
TatI WGTACW 2 cut(s) 325, 1116
TauI GCSGC 5 cut(s) 708, 998, 1001, 1004, 1970
TfiI GAWTC 5 cut(s) 1063, 1283, 1631, 1811, 1835
Tru1I TTAA 3 cut(s) 1221, 1953, 1991
Tru9I TTAA 3 cut(s) 1221, 1953, 1991
TscAI CASTG 3 cut(s) 111, 1442, 1576
TseFI GTSAC 3 cut(s) 646, 845, 1567
TseI GCWGC 8 cut(s) 131, 134, 171, 779, 1383, 1637, 1750, 1867
Tsp45I GTSAC 3 cut(s) 646, 845, 1567
TspDTI ATGAA 2 cut(s) 1391, 1989
TspGWI ACGGA 9 cut(s) 582, 740, 753, 774, 983, 1530, 1576, 1734, 1789
TspRI CASTG 3 cut(s) 111, 1442, 1576
Tth111I GACNNNGTC 1 cut(s) 763
Van91I CCANNNNNTGG 1 cut(s) 268
VpaK11BI GGWCC 7 cut(s) 247, 313, 356, 497, 671, 1126, 1797
XagI CCTNNNNNAGG 1 cut(s) 1270
XceI RCATGY 1 cut(s) 1566
XcmI CCANNNNNNNNNTGG 1 cut(s) 507
XhoI CTCGAG 1 cut(s) 548
XmiI GTMKAC 1 cut(s) 767
XmnI GAANNNNTTC 1 cut(s) 560
XspI CTAG 4 cut(s) 96, 696, 792, 2011
ZrmI AGTACT 1 cut(s) 327
Zsp2I ATGCAT 1 cut(s) 1705
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.