Rmu_co8342223.1_g000001
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8342223.1
OG0011041
Physical Location & Seq
Reverse (-)
1 .. 1012
1012 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8342223.1_g000001.1.cds

Sequence Viewer

Length: 1003 bp
gatcacaactcattctccggttctcttccgcattccctctcctctctccataggcttcgaacccttgatttctcttataacaacctcaccggtccattgcccgaatggctgagcggtctgaaccggctctactatctccgcctcgagtggaaccggttcaacggaaccgtcccgcctctgaaccagtcctctctccaaacctttaacgtctccggaaacaacctcaccggcgtcgtacctgtcactccgactctcctccgcttcggaccgtcatcgttcttgtggaaccctagtctttgcggcgagatcattcgcatagaatgccacccaaacgcaccgtttttccgtccggcgactccgtctacagttcccgcggccccgtcgcctagtcgcgcactcgggctgagaaccgctcagggcgttgagttgactcagccgtgtcacaagaagcgcaagagaaccgccgtcctcatcggcttctcttccgccgtgttcgtcctgatctgctcgatcctctgcttcgtcctggccgtcaagaaacagaggaagcacgtcaaaaggacggacctgtcctcggacgacgcggcggcggctcaggcggcgcaggcggtgcagatggagcaggaggagctggagcagaaggtgaagagagttcaggggattcaggtggtgaagagcgggagcttgttgttctgtgcgggcgaggcgcaggtgtactcgctggaccagctgatgagggcgtcggcggagcttttgggaagagggacgctggggtccacctacaaggcggtgctggacaaccgtctgatcgtctgcgttaaacggctggatgctagtgcgttggagggtacgggtagggaagccttcgagaggcacttggaatcggtgggagggctccggcatccgaacctggttccgctccgagcttattttcaggccaaagaagagaggctcctcatctacgattaccagcccaatggcagcctcttctccctcattcacg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

334

Amino Acids

36.91

Weight (kDa)

9.46

Isoelectric Point (pI)

47.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G43020
fragaria_vesca FvH4_2g33931 FvH4_2g33931
malus_domestica MD08G1095100.v1.1 MD15G1078000.v1.1
prunus_persica Prupe.1G431300_v2.0.a1
pyrus_communis pycom08g07710 pycom15g07280
rosa_chinensis RchiOBHm_Chr6g0308471
rosa_laevigata RLG00000010640
rosa_multiflora Rmu_co8342223.1_g000001 Rmu_sc0001485.1_g000009 Rmu_sc0011796.1_g000010
rosa_roxburghii Rroxscaffold_7G00160100
rosa_rugosa Rorug06G0367000
rosa_samantha Rh6AG476800 Rh6BG487000 Rh6CG492100 Rh6DG478200
rosa_wichuraiana Rw6G041590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 78
AarI CACCTGC 1 cut(s) 700
AasI GACNNNNNNGTC 2 cut(s) 568, 772
Acc36I ACCTGC 1 cut(s) 700
AccBSI CCGCTC 4 cut(s) 114, 413, 678, 919
AccI GTMKAC 1 cut(s) 362
AccII CGCG 3 cut(s) 374, 393, 584
AccIII TCCGGA 1 cut(s) 212
AclWI GGATC 1 cut(s) 505
AcoI YGGCCR 1 cut(s) 528
AcyI GRCGYC 2 cut(s) 231, 740
AfaI GTAC 3 cut(s) 237, 716, 850
AfiI CCNNNNNNNGG 2 cut(s) 574, 870
AgeI ACCGGT 2 cut(s) 89, 153
AgsI TTSAA 1 cut(s) 160
AjiI CACGTC 1 cut(s) 553
AjnI CCWGG 2 cut(s) 525, 909
AluBI AGCT 5 cut(s) 631, 684, 730, 751, 926
AluI AGCT 5 cut(s) 631, 684, 730, 751, 926
Alw26I GTCTC 1 cut(s) 214
AlwI GGATC 1 cut(s) 505
Ama87I CYCGRG 2 cut(s) 143, 398
Aor13HI TCCGGA 1 cut(s) 212
AoxI GGCC 3 cut(s) 375, 528, 936
ApeKI GCWGC 1 cut(s) 981
AsiGI ACCGGT 2 cut(s) 89, 153
Asp700I GAANNNNTTC 1 cut(s) 155
AspLEI GCGC 4 cut(s) 395, 453, 604, 709
AspS9I GGNCC 6 cut(s) 92, 266, 376, 565, 724, 774
AsuHPI GGTGA 4 cut(s) 79, 217, 655, 682
AsuII TTCGAA 1 cut(s) 58
AvaI CYCGRG 2 cut(s) 143, 398
AvaII GGWCC 5 cut(s) 92, 266, 565, 724, 774
BanII GRGCYC 1 cut(s) 897
BbvI GCAGC 1 cut(s) 993
BccI CCATC 1 cut(s) 610
BceAI ACGGC 5 cut(s) 421, 449, 473, 515, 839
BciT130I CCWGG 2 cut(s) 527, 911
BcoDI GTCTC 1 cut(s) 214
BfaI CTAG 3 cut(s) 291, 387, 834
BfmI CTRYAG 1 cut(s) 363
BfuAI ACCTGC 1 cut(s) 700
BglI GCCNNNNNGGC 1 cut(s) 106
BisI GCNGC 7 cut(s) 301, 375, 585, 588, 591, 600, 982
BlpI GCTNAGC 1 cut(s) 110
BlsI GCNGC 7 cut(s) 302, 376, 586, 589, 592, 601, 983
Bme1390I CCNGG 2 cut(s) 527, 911
Bme18I GGWCC 5 cut(s) 92, 266, 565, 724, 774
BmeT110I CYCGRG 2 cut(s) 143, 398
BmgBI CACGTC 1 cut(s) 553
BmgT120I GGNCC 6 cut(s) 92, 266, 376, 565, 724, 774
BmiI GGNNCC 8 cut(s) 152, 166, 287, 378, 775, 896, 915, 953
BmrFI CCNGG 2 cut(s) 527, 911
BmsI GCATC 2 cut(s) 820, 910
BoxI GACNNNNGTC 1 cut(s) 801
BplI GAGNNNNNCTC 2 cut(s) 397, 429
BpmI CTGGAG 1 cut(s) 653
Bpu10I CCTNAGC 2 cut(s) 414, 594
Bpu1102I GCTNAGC 1 cut(s) 110
Bpu14I TTCGAA 1 cut(s) 58
BsaHI GRCGYC 2 cut(s) 231, 740
BsaJI CCNNGG 2 cut(s) 372, 573
BsaWI WCCGGW 4 cut(s) 17, 89, 153, 212
BsaXI ACNNNNNCTCC 1 cut(s) 29
Bsc4I CCNNNNNNNGG 2 cut(s) 574, 870
Bse118I RCCGGY 4 cut(s) 89, 123, 153, 227
Bse1I ACTGG 1 cut(s) 184
Bse3DI GCAATG 1 cut(s) 95
BseAI TCCGGA 1 cut(s) 212
BseBI CCWGG 2 cut(s) 527, 911
BseDI CCNNGG 2 cut(s) 372, 573
BseGI GGATG 2 cut(s) 835, 901
BseLI CCNNNNNNNGG 2 cut(s) 574, 870
BseMI GCAATG 1 cut(s) 95
BseMII CTCAG 5 cut(s) 101, 395, 428, 446, 608
BseNI ACTGG 1 cut(s) 184
BseRI GAGGAG 4 cut(s) 31, 245, 641, 944
BseXI GCAGC 1 cut(s) 993
BseYI CCCAGC 1 cut(s) 769
BsgI GTGCAG 1 cut(s) 632
Bsh1236I CGCG 3 cut(s) 374, 393, 584
BshFI GGCC 3 cut(s) 377, 530, 938
BshTI ACCGGT 2 cut(s) 89, 153
BsiHKCI CYCGRG 2 cut(s) 143, 398
BsiSI CCGG 8 cut(s) 18, 90, 124, 154, 213, 228, 350, 898
BslFI GGGAC 2 cut(s) 155, 778
BslI CCNNNNNNNGG 2 cut(s) 574, 870
BsmAI GTCTC 1 cut(s) 214
BsmBI CGTCTC 1 cut(s) 214
BsmFI GGGAC 2 cut(s) 155, 778
BsmI GAATGC 2 cut(s) 31, 326
BsnI GGCC 3 cut(s) 377, 530, 938
BsoBI CYCGRG 2 cut(s) 143, 398
Bsp119I TTCGAA 1 cut(s) 58
Bsp1286I GDGCHC 1 cut(s) 897
Bsp13I TCCGGA 1 cut(s) 212
Bsp143I GATC 4 cut(s) 306, 501, 510, 807
Bsp1720I GCTNAGC 1 cut(s) 110
BspANI GGCC 3 cut(s) 377, 530, 938
BspCNI CTCAG 5 cut(s) 102, 396, 427, 445, 607
BspEI TCCGGA 1 cut(s) 212
BspFNI CGCG 3 cut(s) 374, 393, 584
BspLI GGNNCC 8 cut(s) 152, 166, 287, 378, 775, 896, 915, 953
BspMI ACCTGC 1 cut(s) 700
BspPI GGATC 1 cut(s) 505
BspQI GCTCTTC 1 cut(s) 668
BspT104I TTCGAA 1 cut(s) 58
BsrBI CCGCTC 4 cut(s) 114, 413, 678, 919
BsrDI GCAATG 1 cut(s) 95
BsrFI RCCGGY 4 cut(s) 89, 123, 153, 227
BsrI ACTGG 1 cut(s) 184
BssAI RCCGGY 4 cut(s) 89, 123, 153, 227
BssECI CCNNGG 2 cut(s) 372, 573
BssMI GATC 4 cut(s) 306, 501, 510, 807
BssNI GRCGYC 2 cut(s) 231, 740
Bst2UI CCWGG 2 cut(s) 527, 911
Bst4CI ACNGT 5 cut(s) 169, 270, 339, 367, 803
Bst6I CTCTTC 7 cut(s) 30, 487, 641, 668, 754, 939, 992
BstACI GRCGYC 2 cut(s) 231, 740
BstAPI GCANNNNNTGC 2 cut(s) 321, 610
BstBI TTCGAA 1 cut(s) 58
BstC8I GCNNGC 2 cut(s) 606, 700
BstDEI CTNAG 5 cut(s) 110, 404, 414, 432, 594
BstDSI CCRYGG 1 cut(s) 372
BstENI CCTNNNNNAGG 1 cut(s) 868
BstF5I GGATG 2 cut(s) 835, 901
BstFNI CGCG 3 cut(s) 374, 393, 584
BstHHI GCGC 4 cut(s) 395, 453, 604, 709
BstKTI GATC 5 cut(s) 4, 309, 504, 513, 810
BstMAI GTCTC 1 cut(s) 214
BstMBI GATC 4 cut(s) 306, 501, 510, 807
BstNI CCWGG 2 cut(s) 527, 911
BstPAI GACNNNNGTC 1 cut(s) 801
BstSCI CCNGG 2 cut(s) 525, 909
BstSFI CTRYAG 1 cut(s) 363
BstUI CGCG 3 cut(s) 374, 393, 584
BstV1I GCAGC 1 cut(s) 993
BstXI CCANNNNNNTGG 1 cut(s) 977
BsuRI GGCC 3 cut(s) 377, 530, 938
BtgI CCRYGG 1 cut(s) 372
BtrI CACGTC 1 cut(s) 553
BtsCI GGATG 2 cut(s) 835, 901
BveI ACCTGC 1 cut(s) 700
Cac8I GCNNGC 2 cut(s) 606, 700
CfoI GCGC 4 cut(s) 395, 453, 604, 709
Cfr10I RCCGGY 4 cut(s) 89, 123, 153, 227
Cfr13I GGNCC 6 cut(s) 92, 266, 376, 565, 724, 774
Cfr42I CCGCGG 1 cut(s) 375
CpoI CGGWCCG 1 cut(s) 266
CseI GACGC 4 cut(s) 220, 590, 729, 775
CsiI ACCWGGT 1 cut(s) 909
Csp6I GTAC 3 cut(s) 236, 715, 849
CspAI ACCGGT 2 cut(s) 89, 153
CspI CGGWCCG 1 cut(s) 266
CviQI GTAC 3 cut(s) 236, 715, 849
DdeI CTNAG 5 cut(s) 110, 404, 414, 432, 594
DpnI GATC 5 cut(s) 3, 308, 503, 512, 809
DpnII GATC 4 cut(s) 306, 501, 510, 807
DrdI GACNNNNNNGTC 2 cut(s) 568, 772
DseDI GACNNNNNNGTC 2 cut(s) 568, 772
EaeI YGGCCR 1 cut(s) 528
Eam1104I CTCTTC 7 cut(s) 30, 487, 641, 668, 754, 939, 992
EarI CTCTTC 7 cut(s) 30, 487, 641, 668, 754, 939, 992
EciI GGCGGA 3 cut(s) 128, 475, 761
Eco24I GRGCYC 1 cut(s) 897
Eco47I GGWCC 5 cut(s) 92, 266, 565, 724, 774
Eco88I CYCGRG 2 cut(s) 143, 398
EcoNI CCTNNNNNAGG 1 cut(s) 868
EcoRII CCWGG 2 cut(s) 525, 909
EcoT38I GRGCYC 1 cut(s) 897
Esp3I CGTCTC 1 cut(s) 214
FaiI YATR 3 cut(s) 51, 78, 317
FaqI GGGAC 2 cut(s) 155, 778
FauI CCCGC 4 cut(s) 180, 379, 671, 691
FblI GTMKAC 1 cut(s) 362
Fnu4HI GCNGC 7 cut(s) 301, 375, 585, 588, 591, 600, 982
FokI GGATG 2 cut(s) 842, 888
FriOI GRGCYC 1 cut(s) 897
Fsp4HI GCNGC 7 cut(s) 301, 375, 585, 588, 591, 600, 982
FspBI CTAG 3 cut(s) 291, 387, 834
GlaI GCGC 4 cut(s) 394, 452, 603, 708
GluI GCNGC 7 cut(s) 301, 375, 585, 588, 591, 600, 982
GsaI CCCAGC 1 cut(s) 773
GsuI CTGGAG 1 cut(s) 653
HaeIII GGCC 3 cut(s) 377, 530, 938
HapII CCGG 8 cut(s) 18, 90, 124, 154, 213, 228, 350, 898
HgaI GACGC 4 cut(s) 220, 590, 729, 775
HhaI GCGC 4 cut(s) 395, 453, 604, 709
Hin1I GRCGYC 2 cut(s) 231, 740
Hin6I GCGC 4 cut(s) 393, 451, 602, 707
HinP1I GCGC 4 cut(s) 393, 451, 602, 707
HincII GTYRAC 1 cut(s) 429
HindII GTYRAC 1 cut(s) 429
HinfI GANTC 5 cut(s) 250, 355, 430, 661, 881
HpaII CCGG 8 cut(s) 18, 90, 124, 154, 213, 228, 350, 898
HphI GGTGA 4 cut(s) 79, 217, 655, 682
Hpy166II GTNNAC 4 cut(s) 363, 429, 715, 777
Hpy188I TCNGA 8 cut(s) 120, 180, 249, 266, 577, 807, 906, 923
Hpy188III TCNNGA 4 cut(s) 213, 499, 535, 868
Hpy8I GTNNAC 4 cut(s) 363, 429, 715, 777
Hpy99I CGWCG 4 cut(s) 236, 385, 584, 745
HpyAV CCTTC 2 cut(s) 634, 874
HpyCH4III ACNGT 5 cut(s) 169, 270, 339, 367, 803
HpyCH4IV ACGT 2 cut(s) 207, 552
HpyCH4V TGCA 1 cut(s) 613
HpyF3I CTNAG 5 cut(s) 110, 404, 414, 432, 594
HpySE526I ACGT 2 cut(s) 207, 552
Hsp92I GRCGYC 2 cut(s) 231, 740
HspAI GCGC 4 cut(s) 393, 451, 602, 707
Kpn2I TCCGGA 1 cut(s) 212
KspI CCGCGG 1 cut(s) 375
Kzo9I GATC 4 cut(s) 306, 501, 510, 807
LguI GCTCTTC 1 cut(s) 668
LmnI GCTCC 8 cut(s) 619, 628, 634, 681, 748, 900, 924, 957
Lsp1109I GCAGC 1 cut(s) 993
LweI GCATC 2 cut(s) 820, 910
MabI ACCWGGT 1 cut(s) 909
MaeI CTAG 3 cut(s) 291, 387, 834
MaeII ACGT 2 cut(s) 207, 552
MaeIII GTNAC 2 cut(s) 241, 440
MalI GATC 5 cut(s) 3, 308, 503, 512, 809
MbiI CCGCTC 4 cut(s) 114, 413, 678, 919
MboI GATC 4 cut(s) 306, 501, 510, 807
MboII GAAGA 7 cut(s) 17, 474, 658, 685, 771, 956, 979
MhlI GDGCHC 1 cut(s) 897
MlyI GAGTC 3 cut(s) 244, 349, 424
MmeI TCCRAC 2 cut(s) 272, 822
MroI TCCGGA 1 cut(s) 212
MroXI GAANNNNTTC 1 cut(s) 155
MseI TTAA 2 cut(s) 204, 819
MspA1I CMGCKG 2 cut(s) 374, 730
MspI CCGG 8 cut(s) 18, 90, 124, 154, 213, 228, 350, 898
MspR9I CCNGG 2 cut(s) 527, 911
Mva1269I GAATGC 2 cut(s) 31, 326
MvaI CCWGG 2 cut(s) 527, 911
MvnI CGCG 3 cut(s) 374, 393, 584
NdeII GATC 4 cut(s) 306, 501, 510, 807
NlaIV GGNNCC 8 cut(s) 152, 166, 287, 378, 775, 896, 915, 953
NmuCI GTSAC 2 cut(s) 241, 440
NspV TTCGAA 1 cut(s) 58
PaeR7I CTCGAG 1 cut(s) 143
PaqCI CACCTGC 1 cut(s) 700
PciSI GCTCTTC 1 cut(s) 668
PcsI WCGNNNNNNNCGW 1 cut(s) 528
PctI GAATGC 2 cut(s) 31, 326
PdmI GAANNNNTTC 1 cut(s) 155
PfeI GAWTC 2 cut(s) 661, 881
PflFI GACNNNGTC 1 cut(s) 358
PinAI ACCGGT 2 cut(s) 89, 153
PkrI GCNGC 7 cut(s) 302, 376, 586, 589, 592, 601, 983
PleI GAGTC 3 cut(s) 244, 349, 424
PpsI GAGTC 3 cut(s) 244, 349, 424
PshAI GACNNNNGTC 1 cut(s) 801
PsiI TTATAA 1 cut(s) 78
Psp6I CCWGG 2 cut(s) 525, 909
PspFI CCCAGC 1 cut(s) 769
PspGI CCWGG 2 cut(s) 525, 909
PspN4I GGNNCC 8 cut(s) 152, 166, 287, 378, 775, 896, 915, 953
PspPI GGNCC 6 cut(s) 92, 266, 376, 565, 724, 774
PspXI VCTCGAGB 1 cut(s) 143
PsrI GAACNNNNNNTAC 2 cut(s) 113, 145
PsyI GACNNNGTC 1 cut(s) 358
PvuII CAGCTG 1 cut(s) 730
RsaI GTAC 3 cut(s) 237, 716, 850
RsaNI GTAC 3 cut(s) 236, 715, 849
Rsr2I CGGWCCG 1 cut(s) 266
RsrII CGGWCCG 1 cut(s) 266
SacII CCGCGG 1 cut(s) 375
SapI GCTCTTC 1 cut(s) 668
SaqAI TTAA 2 cut(s) 204, 819
SatI GCNGC 7 cut(s) 301, 375, 585, 588, 591, 600, 982
Sau3AI GATC 4 cut(s) 306, 501, 510, 807
Sau96I GGNCC 6 cut(s) 92, 266, 376, 565, 724, 774
SchI GAGTC 3 cut(s) 244, 349, 424
ScrFI CCNGG 2 cut(s) 527, 911
SduI GDGCHC 1 cut(s) 897
SexAI ACCWGGT 1 cut(s) 909
SfaNI GCATC 2 cut(s) 820, 910
SfcI CTRYAG 1 cut(s) 363
Sfr274I CTCGAG 1 cut(s) 143
Sfr303I CCGCGG 1 cut(s) 375
SfuI TTCGAA 1 cut(s) 58
SgrAI CRCCGGYG 1 cut(s) 227
SgrBI CCGCGG 1 cut(s) 375
SinI GGWCC 5 cut(s) 92, 266, 565, 724, 774
SlaI CTCGAG 1 cut(s) 143
SmlI CTYRAG 1 cut(s) 143
SmoI CTYRAG 1 cut(s) 143
SspMI CTAG 3 cut(s) 291, 387, 834
StyD4I CCNGG 2 cut(s) 525, 909
TaaI ACNGT 5 cut(s) 169, 270, 339, 367, 803
TaiI ACGT 2 cut(s) 210, 555
TaqI TCGA 4 cut(s) 58, 144, 509, 867
TatI WGTACW 1 cut(s) 714
TauI GCSGC 6 cut(s) 303, 377, 587, 590, 593, 602
TfiI GAWTC 2 cut(s) 661, 881
Tru1I TTAA 2 cut(s) 204, 819
Tru9I TTAA 2 cut(s) 204, 819
TseFI GTSAC 2 cut(s) 241, 440
TseI GCWGC 1 cut(s) 981
Tsp45I GTSAC 2 cut(s) 241, 440
TspGWI ACGGA 4 cut(s) 177, 335, 348, 578
Tth111I GACNNNGTC 1 cut(s) 358
VpaK11BI GGWCC 5 cut(s) 92, 266, 565, 724, 774
XagI CCTNNNNNAGG 1 cut(s) 868
XcmI CCANNNNNNNNNTGG 1 cut(s) 102
XhoI CTCGAG 1 cut(s) 143
XmiI GTMKAC 1 cut(s) 362
XmnI GAANNNNTTC 1 cut(s) 155
XspI CTAG 3 cut(s) 291, 387, 834
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.