xylulose
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G49650 AT5G49650 |
| fragaria_vesca | FvH4_5g33550 FvH4_5g33550 FvH4_5g33550 FvH4_5g33550 FvH4_5g33550 FvH4_5g33550 FvH4_5g33550 FvH4_5g33550 FvH4_5g33550 FvH4_5g33550 FvH4_5g33570 |
| malus_domestica | MD08G1210700.v1.1 MD15G1398600.v1.1 |
| prunus_persica | Prupe.1G542700_v2.0.a1 Prupe.1G542700_v2.0.a1 |
| pyrus_communis | pycom08g18160 pycom15g35480 |
| rosa_chinensis | RchiOBHm_Chr7g0232371 RchiOBHm_Chr7g0232391 RchiOBHm_Chr7g0232401 |
| rosa_laevigata | RLG00000001346 RLG00000001347 RLG00000001351 |
| rosa_multiflora | Rmu_co8257077.1_g000001 Rmu_sc0003113.1_g000011 Rmu_sc0003113.1_g000018 Rmu_ssc0000484.1_g000014 |
| rosa_roxburghii | Rroxscaffold_3G00228360 Rroxscaffold_3G00228410 |
| rosa_rugosa | Rorug07G0273100 Rorug07G0274500 |
| rosa_samantha | Rh7AG426800 Rh7AG427100 Rh7BG400600 Rh7BG401800 Rh7BG402000 Rh7CG446600 Rh7DG418200 Rh7DG418500 |
| rosa_wichuraiana | Rw7G035410 Rw7G035440 Rw7G035450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 857 |
| AccBSI | CCGCTC | 1 cut(s) | 517 |
| AccII | CGCG | 1 cut(s) | 1592 |
| AciI | CCGC | 5 cut(s) | 5, 294, 517, 530, 1306 |
| AclI | AACGTT | 1 cut(s) | 688 |
| AclWI | GGATC | 2 cut(s) | 15, 1078 |
| AcsI | RAATTY | 3 cut(s) | 667, 1047, 1155 |
| AcyI | GRCGYC | 1 cut(s) | 611 |
| AfaI | GTAC | 3 cut(s) | 433, 883, 1515 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 156 |
| AgsI | TTSAA | 6 cut(s) | 360, 373, 815, 950, 1286, 1302 |
| AjnI | CCWGG | 1 cut(s) | 886 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 248, 280 |
| AleI | CACNNNNGTG | 1 cut(s) | 309 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1586, 1618 |
| Alw21I | GWGCWC | 1 cut(s) | 578 |
| Alw26I | GTCTC | 3 cut(s) | 162, 1221, 1581 |
| AlwI | GGATC | 2 cut(s) | 15, 1078 |
| Ama87I | CYCGRG | 1 cut(s) | 1038 |
| AoxI | GGCC | 2 cut(s) | 1439, 1666 |
| ApeKI | GCWGC | 6 cut(s) | 291, 656, 704, 1099, 1463, 1475 |
| ApoI | RAATTY | 3 cut(s) | 667, 1047, 1155 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 911, 943 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 114, 1047 |
| AspS9I | GGNCC | 2 cut(s) | 527, 988 |
| AsuC2I | CCSGG | 2 cut(s) | 1039, 1040 |
| AsuHPI | GGTGA | 4 cut(s) | 1018, 1027, 1223, 1259 |
| AsuII | TTCGAA | 1 cut(s) | 86 |
| AvaI | CYCGRG | 1 cut(s) | 1038 |
| AvaII | GGWCC | 2 cut(s) | 527, 988 |
| BanII | GRGCYC | 1 cut(s) | 1312 |
| BauI | CACGAG | 1 cut(s) | 504 |
| Bbv12I | GWGCWC | 1 cut(s) | 578 |
| BbvCI | CCTCAGC | 1 cut(s) | 1065 |
| BbvI | GCAGC | 6 cut(s) | 303, 643, 691, 1111, 1450, 1462 |
| BccI | CCATC | 3 cut(s) | 415, 667, 1627 |
| BciT130I | CCWGG | 1 cut(s) | 888 |
| BcnI | CCSGG | 2 cut(s) | 1039, 1040 |
| BcoDI | GTCTC | 3 cut(s) | 162, 1221, 1581 |
| BfmI | CTRYAG | 1 cut(s) | 717 |
| BfuAI | ACCTGC | 1 cut(s) | 857 |
| BglII | AGATCT | 1 cut(s) | 892 |
| BisI | GCNGC | 6 cut(s) | 292, 657, 705, 1100, 1464, 1476 |
| BlsI | GCNGC | 6 cut(s) | 293, 658, 706, 1101, 1465, 1477 |
| BmcAI | AGTACT | 2 cut(s) | 433, 883 |
| Bme1390I | CCNGG | 3 cut(s) | 888, 1039, 1040 |
| Bme18I | GGWCC | 2 cut(s) | 527, 988 |
| BmeT110I | CYCGRG | 1 cut(s) | 1038 |
| BmgT120I | GGNCC | 2 cut(s) | 527, 988 |
| BmiI | GGNNCC | 2 cut(s) | 913, 990 |
| BmrFI | CCNGG | 3 cut(s) | 888, 1039, 1040 |
| BmrI | ACTGGG | 2 cut(s) | 52, 948 |
| BmsI | GCATC | 3 cut(s) | 643, 1379, 1460 |
| BmuI | ACTGGG | 2 cut(s) | 52, 948 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1190, 1222 |
| BpmI | CTGGAG | 3 cut(s) | 221, 741, 909 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1065 |
| Bpu14I | TTCGAA | 1 cut(s) | 86 |
| BpuEI | CTTGAG | 5 cut(s) | 980, 1217, 1241, 1411, 1556 |
| BpuMI | CCSGG | 2 cut(s) | 1039, 1040 |
| BsaBI | GATNNNNATC | 1 cut(s) | 129 |
| BsaHI | GRCGYC | 1 cut(s) | 611 |
| BsaJI | CCNNGG | 2 cut(s) | 37, 1038 |
| BsaWI | WCCGGW | 1 cut(s) | 1361 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 156 |
| Bse1I | ACTGG | 5 cut(s) | 58, 502, 529, 915, 954 |
| Bse3DI | GCAATG | 3 cut(s) | 437, 449, 1596 |
| Bse8I | GATNNNNATC | 1 cut(s) | 129 |
| BseBI | CCWGG | 1 cut(s) | 888 |
| BseDI | CCNNGG | 2 cut(s) | 37, 1038 |
| BseGI | GGATG | 5 cut(s) | 426, 669, 1084, 1421, 1638 |
| BseJI | GATNNNNATC | 1 cut(s) | 129 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 156 |
| BseMI | GCAATG | 3 cut(s) | 437, 449, 1596 |
| BseMII | CTCAG | 8 cut(s) | 327, 569, 800, 984, 1056, 1278, 1308, 1416 |
| BseNI | ACTGG | 5 cut(s) | 58, 502, 529, 915, 954 |
| BseRI | GAGGAG | 1 cut(s) | 749 |
| BseXI | GCAGC | 6 cut(s) | 303, 643, 691, 1111, 1450, 1462 |
| BseYI | CCCAGC | 1 cut(s) | 659 |
| BsgI | GTGCAG | 2 cut(s) | 854, 1449 |
| Bsh1236I | CGCG | 1 cut(s) | 1592 |
| BshFI | GGCC | 2 cut(s) | 1441, 1668 |
| BsiHKAI | GWGCWC | 1 cut(s) | 578 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1038 |
| BsiSI | CCGG | 2 cut(s) | 1039, 1362 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 156 |
| BsmAI | GTCTC | 3 cut(s) | 162, 1221, 1581 |
| BsmBI | CGTCTC | 1 cut(s) | 1581 |
| BsmI | GAATGC | 2 cut(s) | 466, 1030 |
| BsnI | GGCC | 2 cut(s) | 1441, 1668 |
| BsoBI | CYCGRG | 1 cut(s) | 1038 |
| Bsp119I | TTCGAA | 1 cut(s) | 86 |
| Bsp1286I | GDGCHC | 2 cut(s) | 578, 1312 |
| BspACI | CCGC | 5 cut(s) | 5, 294, 517, 530, 1306 |
| BspANI | GGCC | 2 cut(s) | 1441, 1668 |
| BspCNI | CTCAG | 8 cut(s) | 328, 568, 799, 985, 1057, 1277, 1309, 1415 |
| BspFNI | CGCG | 1 cut(s) | 1592 |
| BspLI | GGNNCC | 2 cut(s) | 913, 990 |
| BspMI | ACCTGC | 1 cut(s) | 857 |
| BspPI | GGATC | 2 cut(s) | 15, 1078 |
| BspT104I | TTCGAA | 1 cut(s) | 86 |
| BsrBI | CCGCTC | 1 cut(s) | 517 |
| BsrDI | GCAATG | 3 cut(s) | 437, 449, 1596 |
| BsrI | ACTGG | 5 cut(s) | 58, 502, 529, 915, 954 |
| BssECI | CCNNGG | 2 cut(s) | 37, 1038 |
| BssNI | GRCGYC | 1 cut(s) | 611 |
| BssSI | CACGAG | 1 cut(s) | 504 |
| Bst2BI | CACGAG | 1 cut(s) | 504 |
| Bst2UI | CCWGG | 1 cut(s) | 888 |
| Bst4CI | ACNGT | 7 cut(s) | 76, 178, 308, 824, 925, 1058, 1432 |
| Bst6I | CTCTTC | 3 cut(s) | 21, 38, 1622 |
| BstACI | GRCGYC | 1 cut(s) | 611 |
| BstBI | TTCGAA | 1 cut(s) | 86 |
| BstC8I | GCNNGC | 4 cut(s) | 296, 1308, 1487, 1568 |
| BstF5I | GGATG | 5 cut(s) | 426, 669, 1084, 1421, 1638 |
| BstFNI | CGCG | 1 cut(s) | 1592 |
| BstMAI | GTCTC | 3 cut(s) | 162, 1221, 1581 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 48, 713, 1108, 1472, 1491, 1589, 1598 |
| BstNI | CCWGG | 1 cut(s) | 888 |
| BstSCI | CCNGG | 3 cut(s) | 886, 1037, 1038 |
| BstSFI | CTRYAG | 1 cut(s) | 717 |
| BstUI | CGCG | 1 cut(s) | 1592 |
| BstV1I | GCAGC | 6 cut(s) | 303, 643, 691, 1111, 1450, 1462 |
| BstX2I | RGATCY | 3 cut(s) | 7, 892, 1070 |
| BstYI | RGATCY | 3 cut(s) | 7, 892, 1070 |
| BsuRI | GGCC | 2 cut(s) | 1441, 1668 |
| BtsCI | GGATG | 5 cut(s) | 426, 669, 1084, 1421, 1638 |
| BtsI | GCAGTG | 1 cut(s) | 842 |
| BtsIMutI | CAGTG | 4 cut(s) | 495, 842, 922, 1143 |
| BveI | ACCTGC | 1 cut(s) | 857 |
| Cac8I | GCNNGC | 4 cut(s) | 296, 1308, 1487, 1568 |
| Cfr13I | GGNCC | 2 cut(s) | 527, 988 |
| Cfr9I | CCCGGG | 1 cut(s) | 1038 |
| CseI | GACGC | 2 cut(s) | 600, 1598 |
| Csp6I | GTAC | 3 cut(s) | 432, 882, 1514 |
| CviAII | CATG | 3 cut(s) | 208, 968, 1481 |
| CviQI | GTAC | 3 cut(s) | 432, 882, 1514 |
| Eam1104I | CTCTTC | 3 cut(s) | 21, 38, 1622 |
| EarI | CTCTTC | 3 cut(s) | 21, 38, 1622 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Eco147I | AGGCCT | 1 cut(s) | 1441 |
| Eco24I | GRGCYC | 1 cut(s) | 1312 |
| Eco47I | GGWCC | 2 cut(s) | 527, 988 |
| Eco88I | CYCGRG | 1 cut(s) | 1038 |
| EcoRII | CCWGG | 1 cut(s) | 886 |
| EcoT38I | GRGCYC | 1 cut(s) | 1312 |
| Esp3I | CGTCTC | 1 cut(s) | 1581 |
| FaeI | CATG | 3 cut(s) | 211, 971, 1484 |
| FatI | CATG | 3 cut(s) | 207, 967, 1480 |
| FauI | CCCGC | 2 cut(s) | 287, 1299 |
| Fnu4HI | GCNGC | 6 cut(s) | 292, 657, 705, 1100, 1464, 1476 |
| FokI | GGATG | 5 cut(s) | 433, 676, 1091, 1428, 1645 |
| FriOI | GRGCYC | 1 cut(s) | 1312 |
| Fsp4HI | GCNGC | 6 cut(s) | 292, 657, 705, 1100, 1464, 1476 |
| GluI | GCNGC | 6 cut(s) | 292, 657, 705, 1100, 1464, 1476 |
| GsaI | CCCAGC | 1 cut(s) | 663 |
| GsuI | CTGGAG | 3 cut(s) | 221, 741, 909 |
| HaeIII | GGCC | 2 cut(s) | 1441, 1668 |
| HapII | CCGG | 2 cut(s) | 1039, 1362 |
| HgaI | GACGC | 2 cut(s) | 600, 1598 |
| Hin1I | GRCGYC | 1 cut(s) | 611 |
| Hin1II | CATG | 3 cut(s) | 211, 971, 1484 |
| HindIII | AAGCTT | 3 cut(s) | 542, 1507, 1649 |
| HpaII | CCGG | 2 cut(s) | 1039, 1362 |
| HphI | GGTGA | 4 cut(s) | 1018, 1027, 1223, 1259 |
| Hpy166II | GTNNAC | 5 cut(s) | 163, 181, 522, 988, 1018 |
| Hpy188I | TCNGA | 9 cut(s) | 130, 337, 801, 1267, 1349, 1398, 1415, 1560, 1676 |
| Hpy188III | TCNNGA | 8 cut(s) | 23, 238, 843, 959, 1052, 1196, 1220, 1390 |
| Hpy8I | GTNNAC | 5 cut(s) | 163, 181, 522, 988, 1018 |
| HpyAV | CCTTC | 3 cut(s) | 1225, 1280, 1529 |
| HpyCH4III | ACNGT | 7 cut(s) | 76, 178, 308, 824, 925, 1058, 1432 |
| HpyCH4IV | ACGT | 1 cut(s) | 688 |
| HpyCH4V | TGCA | 7 cut(s) | 442, 835, 1099, 1370, 1466, 1494, 1566 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 48, 713, 1108, 1472, 1491, 1589, 1598 |
| HpySE526I | ACGT | 1 cut(s) | 688 |
| Hsp92I | GRCGYC | 1 cut(s) | 611 |
| Hsp92II | CATG | 3 cut(s) | 211, 971, 1484 |
| LmnI | GCTCC | 3 cut(s) | 473, 760, 1460 |
| Lsp1109I | GCAGC | 6 cut(s) | 303, 643, 691, 1111, 1450, 1462 |
| LweI | GCATC | 3 cut(s) | 643, 1379, 1460 |
| MaeII | ACGT | 1 cut(s) | 688 |
| MaeIII | GTNAC | 4 cut(s) | 917, 972, 1052, 1187 |
| MbiI | CCGCTC | 1 cut(s) | 517 |
| MboII | GAAGA | 9 cut(s) | 8, 25, 125, 198, 502, 1055, 1402, 1636, 1639 |
| MflI | RGATCY | 3 cut(s) | 7, 892, 1070 |
| MhlI | GDGCHC | 2 cut(s) | 578, 1312 |
| MluCI | AATT | 5 cut(s) | 256, 667, 1047, 1155, 1541 |
| MlyI | GAGTC | 3 cut(s) | 547, 1223, 1402 |
| MmeI | TCCRAC | 3 cut(s) | 60, 224, 604 |
| MroXI | GAANNNNTTC | 2 cut(s) | 114, 1047 |
| MseI | TTAA | 2 cut(s) | 402, 1086 |
| MslI | CAYNNNNRTG | 2 cut(s) | 309, 442 |
| MspA1I | CMGCKG | 1 cut(s) | 294 |
| MspI | CCGG | 2 cut(s) | 1039, 1362 |
| MspR9I | CCNGG | 3 cut(s) | 888, 1039, 1040 |
| Mva1269I | GAATGC | 2 cut(s) | 466, 1030 |
| MvaI | CCWGG | 1 cut(s) | 888 |
| MvnI | CGCG | 1 cut(s) | 1592 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 48, 713, 1108, 1472, 1491, 1589, 1598 |
| NciI | CCSGG | 2 cut(s) | 1039, 1040 |
| NlaIII | CATG | 3 cut(s) | 211, 971, 1484 |
| NlaIV | GGNNCC | 2 cut(s) | 913, 990 |
| NmeAIII | GCCGAG | 2 cut(s) | 18, 1110 |
| NmuCI | GTSAC | 2 cut(s) | 917, 1052 |
| NspV | TTCGAA | 1 cut(s) | 86 |
| OliI | CACNNNNGTG | 1 cut(s) | 309 |
| PceI | AGGCCT | 1 cut(s) | 1441 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 120, 189, 258, 1251 |
| PctI | GAATGC | 2 cut(s) | 466, 1030 |
| PdmI | GAANNNNTTC | 2 cut(s) | 114, 1047 |
| PfeI | GAWTC | 7 cut(s) | 26, 83, 125, 189, 356, 407, 1445 |
| PfoI | TCCNGGA | 1 cut(s) | 886 |
| PkrI | GCNGC | 6 cut(s) | 293, 658, 706, 1101, 1465, 1477 |
| PleI | GAGTC | 3 cut(s) | 547, 1222, 1401 |
| PpsI | GAGTC | 3 cut(s) | 547, 1222, 1401 |
| Psp1406I | AACGTT | 1 cut(s) | 688 |
| Psp6I | CCWGG | 1 cut(s) | 886 |
| PspFI | CCCAGC | 1 cut(s) | 659 |
| PspGI | CCWGG | 1 cut(s) | 886 |
| PspN4I | GGNNCC | 2 cut(s) | 913, 990 |
| PspPI | GGNCC | 2 cut(s) | 527, 988 |
| PsuI | RGATCY | 3 cut(s) | 7, 892, 1070 |
| RsaI | GTAC | 3 cut(s) | 433, 883, 1515 |
| RsaNI | GTAC | 3 cut(s) | 432, 882, 1514 |
| RseI | CAYNNNNRTG | 2 cut(s) | 309, 442 |
| SaqAI | TTAA | 2 cut(s) | 402, 1086 |
| SatI | GCNGC | 6 cut(s) | 292, 657, 705, 1100, 1464, 1476 |
| Sau96I | GGNCC | 2 cut(s) | 527, 988 |
| ScaI | AGTACT | 2 cut(s) | 433, 883 |
| SchI | GAGTC | 3 cut(s) | 547, 1223, 1402 |
| ScrFI | CCNGG | 3 cut(s) | 888, 1039, 1040 |
| SduI | GDGCHC | 2 cut(s) | 578, 1312 |
| SfaNI | GCATC | 3 cut(s) | 643, 1379, 1460 |
| SfcI | CTRYAG | 1 cut(s) | 717 |
| SfuI | TTCGAA | 1 cut(s) | 86 |
| SinI | GGWCC | 2 cut(s) | 527, 988 |
| SmaI | CCCGGG | 1 cut(s) | 1040 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 309, 442 |
| SmlI | CTYRAG | 5 cut(s) | 959, 1196, 1220, 1390, 1571 |
| SmoI | CTYRAG | 5 cut(s) | 959, 1196, 1220, 1390, 1571 |
| Sse9I | AATT | 5 cut(s) | 256, 667, 1047, 1155, 1541 |
| SseBI | AGGCCT | 1 cut(s) | 1441 |
| SsiI | CCGC | 5 cut(s) | 5, 294, 517, 530, 1306 |
| StuI | AGGCCT | 1 cut(s) | 1441 |
| StyD4I | CCNGG | 3 cut(s) | 886, 1037, 1038 |
| TaaI | ACNGT | 7 cut(s) | 76, 178, 308, 824, 925, 1058, 1432 |
| TaiI | ACGT | 1 cut(s) | 691 |
| TaqI | TCGA | 8 cut(s) | 45, 86, 123, 216, 261, 384, 488, 1254 |
| TasI | AATT | 5 cut(s) | 256, 667, 1047, 1155, 1541 |
| TatI | WGTACW | 2 cut(s) | 431, 881 |
| TfiI | GAWTC | 7 cut(s) | 26, 83, 125, 189, 356, 407, 1445 |
| Tru1I | TTAA | 2 cut(s) | 402, 1086 |
| Tru9I | TTAA | 2 cut(s) | 402, 1086 |
| TscAI | CASTG | 4 cut(s) | 502, 842, 922, 1150 |
| TseFI | GTSAC | 2 cut(s) | 917, 1052 |
| TseI | GCWGC | 6 cut(s) | 291, 656, 704, 1099, 1463, 1475 |
| Tsp45I | GTSAC | 2 cut(s) | 917, 1052 |
| TspDTI | ATGAA | 6 cut(s) | 80, 107, 660, 680, 1167, 1637 |
| TspGWI | ACGGA | 3 cut(s) | 198, 553, 593 |
| TspMI | CCCGGG | 1 cut(s) | 1038 |
| TspRI | CASTG | 4 cut(s) | 502, 842, 922, 1150 |
| VpaK11BI | GGWCC | 2 cut(s) | 527, 988 |
| XapI | RAATTY | 3 cut(s) | 667, 1047, 1155 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 207 |
| XmaI | CCCGGG | 1 cut(s) | 1038 |
| XmnI | GAANNNNTTC | 2 cut(s) | 114, 1047 |
| ZrmI | AGTACT | 2 cut(s) | 433, 883 |