Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0002095

Physical Location & Seq

Genomic Coordinates Reverse (-)

12812188 .. 12816907

Gene Structure 4720 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00228410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGGCAGATTCGTTGCCTCAAGACTCTTACTTTCTTGGGTTTGACAGCTCTACCCAGTCGCTGAAGGCAACTGTGCTAGACTCCAATCTCAACATTGTTACGACGGAGCTTATCCAATACGACACTGCTTTGCCCCATTACAACACCAAAGATGGAGTTTACCGAGACCCCTCGGTTGATGGGAGAATAGTTTCACCCACCTTGATGTGGATAGAGGCTCTAGATCTCGTACTTGATAAACTTTCAAAATCTAATTTAAATTTTGAGAAGATTGCTGCTGTTTCTGGAAGCGGGCAGCAACATGGGAGTGTCTACTGGAAGAATGGGAGTTCTTCAATATTATCATCTTTGGACCCCAAGAAGCCATTGGTGCATCAGTTCAATGATGCTTTCTCTGTTAAGGAATCGCCGGTGTGGATGGACAGCAGCACCACAGCACAGTGCAAAGAATTAGAGAATGCTGTTGGTGGAGCATTGGAGTTATCCAAACTGACAGGATCACGCGCTTATGAAAGTTCTTTCATGGCATCTCTTCTAATCGGGGGATATGCATCTATTGATGAAACTGATGGTGCAGGGATGAACTTGATGGATATAAAGAAAAGGGCCTGGTCTCAAATAGTATTAGAGGCTACTGCCCCTGGCCTGGCAGAAAAACTTGGAAAACTGGCCCCTGCACATGCTGTTGCTGGTCGTATTGCCCCCTATTTCGCGGAGAGATATAAGTTCAACAAGAATTGCTTGGTTATTCAGTGGTCAGGAGACAACCCTAACAGCCTTGCAGGCTTAACACTAAGTACCCCTGGGGATCTTGGATTGAGTCTTGGCACAAGTGACACTGTCTTTGGGATTACTGATGATCCTCATCCTGGGTTGGAGGGACATGTTTTCCCTAATCCTGTTGACATAAAAGGCTACATGGTAATGTTGTGTTACAAGAATGGGTCTCTAACTCGTGAAGTGGTTTCTGCTATAGATGGGAAGATGGGTTTCTACTACAAAGAGCACGAAATTCTTCCCCCACTTCCAGTTGGTTACCATTGGTACGTTCTCGAAAATTTCACGGGTGATACTTTGGAGGGTGTGAGTGTACGTGAAGAGCAGCAGGAATTTGGCCGTTCTGCTGAGTGCCGAGCAGTAATAGAGGGACAGTTCCTGTCAATGCGCGGTCATGCAGAAAGATTTGGAATGCCTTACCCTCCAAAACGAATAATAGCTACTGGAGGTGGGTCTGTAAATCGCCACATCCTGGGCATAGCAGCAAATATTTTTGGATGTGAGGTCTACACAGTTGAAAGACCTGATTCGGCTTCTCTAGGAGCTGCATTGAGGGCTGCTCACGGTTGGGTATGCAGCAAAAAGGGTAGTTTTGTGCCCTTCTCCTGCATGTACGGGGATAAGATTCAGAAGACATCTCTCAAATGCAGACTAGCGGCGATTCCAGAGACACATTTGGTCCCCAAGTATGGGTTGATGATGAAGAAGAGACTTGAAATAGAGAACCTCCTAGTTCAAAAACTGGGACGATTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004856 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005996 GO:0005997 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019200 GO:0019321 GO:0044237 GO:0044238 GO:0044262 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046835 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

Erg28 FGGY_C FGGY_N

Protein Analysis

510

Amino Acids

55.67

Weight (kDa)

6.21

Isoelectric Point (pI)

37.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FGGY_N	PF00370	177 - 260	1.8e-06	FGGY family of carbohydrate kinases, N-terminal domain
FGGY_C	PF02782	273 - 449	5.1e-20	FGGY family of carbohydrate kinases, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002095)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49650 AT5G49650
fragaria_vesca	FvH4_5g33550 FvH4_5g33550 FvH4_5g33550 FvH4_5g33550 FvH4_5g33550 FvH4_5g33550 FvH4_5g33550 FvH4_5g33550 FvH4_5g33550 FvH4_5g33550 FvH4_5g33570
malus_domestica	MD08G1210700.v1.1 MD15G1398600.v1.1
prunus_persica	Prupe.1G542700_v2.0.a1 Prupe.1G542700_v2.0.a1
pyrus_communis	pycom08g18160 pycom15g35480
rosa_chinensis	RchiOBHm_Chr7g0232371 RchiOBHm_Chr7g0232391 RchiOBHm_Chr7g0232401
rosa_laevigata	RLG00000001346 RLG00000001347 RLG00000001351
rosa_multiflora	Rmu_co8257077.1_g000001 Rmu_sc0003113.1_g000011 Rmu_sc0003113.1_g000018 Rmu_ssc0000484.1_g000014
rosa_roxburghii	Rroxscaffold_3G00228360 Rroxscaffold_3G00228410
rosa_rugosa	Rorug07G0273100 Rorug07G0274500
rosa_samantha	Rh7AG426800 Rh7AG427100 Rh7BG400600 Rh7BG401800 Rh7BG402000 Rh7CG446600 Rh7DG418200 Rh7DG418500
rosa_wichuraiana	Rw7G035410 Rw7G035440 Rw7G035450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1249
AccI	GTMKAC	2 cut(s)	312, 1284
AccII	CGCG	3 cut(s)	504, 713, 1167
AciI	CCGC	4 cut(s)	291, 713, 1167, 1433
AclWI	GGATC	3 cut(s)	505, 816, 854
AcoI	YGGCCR	1 cut(s)	1114
AcsI	RAATTY	4 cut(s)	259, 1011, 1057, 1109
AcuI	CTGAAG	1 cut(s)	83
AfaI	GTAC	5 cut(s)	231, 799, 1046, 1092, 1391
AfiI	CCNNNNNNNGG	6 cut(s)	207, 646, 869, 1249, 1466, 1467
AflIII	ACRYGT	1 cut(s)	883
AgsI	TTSAA	7 cut(s)	246, 336, 382, 730, 1295, 1493, 1514
AjnI	CCWGG	6 cut(s)	608, 640, 645, 802, 868, 1248
AluBI	AGCT	4 cut(s)	48, 109, 1217, 1322
AluI	AGCT	4 cut(s)	48, 109, 1217, 1322
Alw21I	GWGCWC	1 cut(s)	1008
Alw26I	GTCTC	6 cut(s)	159, 618, 756, 951, 1439, 1480
AlwI	GGATC	3 cut(s)	505, 816, 854
AlwNI	CAGNNNCTG	2 cut(s)	61, 1156
AoxI	GGCC	4 cut(s)	606, 643, 669, 1114
ApeKI	GCWGC	8 cut(s)	275, 295, 426, 1102, 1259, 1322, 1334, 1353
ApoI	RAATTY	4 cut(s)	259, 1011, 1057, 1109
ArsI	GACNNNNNNTTYG	2 cut(s)	827, 859
Asp700I	GAANNNNTTC	2 cut(s)	190, 1014
AspLEI	GCGC	2 cut(s)	506, 1167
AspS9I	GGNCC	4 cut(s)	352, 606, 670, 1456
AsuHPI	GGTGA	2 cut(s)	186, 1079
AvaII	GGWCC	2 cut(s)	352, 1456
BaeGI	GKGCMC	1 cut(s)	1377
BauI	CACGAG	1 cut(s)	954
BbsI	GAAGAC	1 cut(s)	1415
Bbv12I	GWGCWC	1 cut(s)	1008
BbvI	GCAGC	8 cut(s)	262, 307, 438, 1114, 1271, 1309, 1321, 1365
BccI	CCATC	7 cut(s)	146, 173, 412, 563, 583, 971, 979
BceAI	ACGGC	1 cut(s)	1101
BciT130I	CCWGG	6 cut(s)	610, 642, 647, 804, 870, 1250
BcoDI	GTCTC	6 cut(s)	159, 618, 756, 951, 1439, 1480
BfaI	CTAG	5 cut(s)	77, 221, 1316, 1430, 1508
BfmI	CTRYAG	1 cut(s)	972
BglI	GCCNNNNNGGC	1 cut(s)	783
BglII	AGATCT	1 cut(s)	223
BisI	GCNGC	9 cut(s)	276, 296, 427, 1103, 1260, 1323, 1335, 1354, 1434
BlsI	GCNGC	9 cut(s)	277, 297, 428, 1104, 1261, 1324, 1336, 1355, 1435
Bme1390I	CCNGG	6 cut(s)	610, 642, 647, 804, 870, 1250
Bme18I	GGWCC	2 cut(s)	352, 1456
BmgT120I	GGNCC	4 cut(s)	352, 606, 670, 1456
BmiI	GGNNCC	3 cut(s)	354, 672, 1458
BmrFI	CCNGG	6 cut(s)	610, 642, 647, 804, 870, 1250
BmrI	ACTGGG	2 cut(s)	49, 1529
BmsI	GCATC	4 cut(s)	376, 382, 536, 560
BmuI	ACTGGG	2 cut(s)	49, 1529
BpiI	GAAGAC	1 cut(s)	1415
BplI	GAGNNNNNCTC	2 cut(s)	1321, 1353
BpmI	CTGGAG	1 cut(s)	1242
BsaAI	YACGTR	1 cut(s)	1094
BsaBI	GATNNNNATC	2 cut(s)	550, 864
BsaI	GGTCTC	3 cut(s)	159, 618, 951
BsaJI	CCNNGG	6 cut(s)	171, 640, 802, 803, 869, 1249
Bsc4I	CCNNNNNNNGG	6 cut(s)	207, 646, 869, 1249, 1466, 1467
Bse118I	RCCGGY	1 cut(s)	409
Bse1I	ACTGG	6 cut(s)	55, 320, 672, 1028, 1225, 1524
Bse8I	GATNNNNATC	2 cut(s)	550, 864
BseBI	CCWGG	6 cut(s)	610, 642, 647, 804, 870, 1250
BseDI	CCNNGG	6 cut(s)	171, 640, 802, 803, 869, 1249
BseGI	GGATG	5 cut(s)	423, 585, 865, 1245, 1280
BseJI	GATNNNNATC	2 cut(s)	550, 864
BseLI	CCNNNNNNNGG	6 cut(s)	207, 646, 869, 1249, 1466, 1467
BseMII	CTCAG	1 cut(s)	1116
BseNI	ACTGG	6 cut(s)	55, 320, 672, 1028, 1225, 1524
BseSI	GKGCMC	1 cut(s)	1377
BseXI	GCAGC	8 cut(s)	262, 307, 438, 1114, 1271, 1309, 1321, 1365
BsgI	GTGCAG	2 cut(s)	594, 660
Bsh1236I	CGCG	3 cut(s)	504, 713, 1167
BshFI	GGCC	4 cut(s)	608, 645, 671, 1116
BsiHKAI	GWGCWC	1 cut(s)	1008
BsiSI	CCGG	1 cut(s)	410
BslFI	GGGAC	3 cut(s)	894, 1161, 1442
BslI	CCNNNNNNNGG	6 cut(s)	207, 646, 869, 1249, 1466, 1467
BsmAI	GTCTC	6 cut(s)	159, 618, 756, 951, 1439, 1480
BsmFI	GGGAC	3 cut(s)	894, 1161, 1442
BsmI	GAATGC	2 cut(s)	463, 1194
BsnI	GGCC	4 cut(s)	608, 645, 671, 1116
Bso31I	GGTCTC	3 cut(s)	159, 618, 951
Bsp1286I	GDGCHC	2 cut(s)	1008, 1377
Bsp143I	GATC	4 cut(s)	223, 497, 808, 859
BspACI	CCGC	4 cut(s)	291, 713, 1167, 1433
BspANI	GGCC	4 cut(s)	608, 645, 671, 1116
BspCNI	CTCAG	1 cut(s)	1117
BspFNI	CGCG	3 cut(s)	504, 713, 1167
BspLI	GGNNCC	3 cut(s)	354, 672, 1458
BspPI	GGATC	3 cut(s)	505, 816, 854
BspQI	GCTCTTC	1 cut(s)	1092
BspTNI	GGTCTC	3 cut(s)	159, 618, 951
BsrFI	RCCGGY	1 cut(s)	409
BsrI	ACTGG	6 cut(s)	55, 320, 672, 1028, 1225, 1524
BssAI	RCCGGY	1 cut(s)	409
BssECI	CCNNGG	6 cut(s)	171, 640, 802, 803, 869, 1249
BssMI	GATC	4 cut(s)	223, 497, 808, 859
BssSI	CACGAG	1 cut(s)	954
Bst2BI	CACGAG	1 cut(s)	954
Bst2UI	CCWGG	6 cut(s)	610, 642, 647, 804, 870, 1250
Bst4CI	ACNGT	6 cut(s)	73, 441, 841, 1152, 1291, 1343
Bst6I	CTCTTC	3 cut(s)	537, 1092, 1478
BstBAI	YACGTR	1 cut(s)	1094
BstC8I	GCNNGC	2 cut(s)	293, 784
BstDEI	CTNAG	2 cut(s)	794, 1125
BstEII	GGTNACC	1 cut(s)	1034
BstF5I	GGATG	5 cut(s)	423, 585, 865, 1245, 1280
BstFNI	CGCG	3 cut(s)	504, 713, 1167
BstHHI	GCGC	2 cut(s)	506, 1167
BstKTI	GATC	4 cut(s)	226, 500, 811, 862
BstMAI	GTCTC	6 cut(s)	159, 618, 756, 951, 1439, 1480
BstMBI	GATC	4 cut(s)	223, 497, 808, 859
BstMWI	GCNNNNNNNGC	3 cut(s)	370, 783, 1331
BstNI	CCWGG	6 cut(s)	610, 642, 647, 804, 870, 1250
BstNSI	RCATGY	3 cut(s)	683, 887, 1390
BstPI	GGTNACC	1 cut(s)	1034
BstSCI	CCNGG	6 cut(s)	608, 640, 645, 802, 868, 1248
BstSFI	CTRYAG	1 cut(s)	972
BstSLI	GKGCMC	1 cut(s)	1377
BstUI	CGCG	3 cut(s)	504, 713, 1167
BstV1I	GCAGC	8 cut(s)	262, 307, 438, 1114, 1271, 1309, 1321, 1365
BstV2I	GAAGAC	1 cut(s)	1415
BstX2I	RGATCY	2 cut(s)	223, 808
BstYI	RGATCY	2 cut(s)	223, 808
BsuRI	GGCC	4 cut(s)	608, 645, 671, 1116
BtsCI	GGATG	5 cut(s)	423, 585, 865, 1245, 1280
BtsI	GCAGTG	1 cut(s)	123
BtsIMutI	CAGTG	4 cut(s)	123, 446, 758, 837
Cac8I	GCNNGC	2 cut(s)	293, 784
CaiI	CAGNNNCTG	2 cut(s)	61, 1156
CfoI	GCGC	2 cut(s)	506, 1167
Cfr10I	RCCGGY	1 cut(s)	409
Cfr13I	GGNCC	4 cut(s)	352, 606, 670, 1456
Csp6I	GTAC	5 cut(s)	230, 798, 1045, 1091, 1390
CviAII	CATG	7 cut(s)	302, 523, 680, 884, 919, 1172, 1387
CviQI	GTAC	5 cut(s)	230, 798, 1045, 1091, 1390
DdeI	CTNAG	2 cut(s)	794, 1125
DpnI	GATC	4 cut(s)	225, 499, 810, 861
DpnII	GATC	4 cut(s)	223, 497, 808, 859
DraI	TTTAAA	1 cut(s)	258
EaeI	YGGCCR	1 cut(s)	1114
Eam1104I	CTCTTC	3 cut(s)	537, 1092, 1478
EarI	CTCTTC	3 cut(s)	537, 1092, 1478
Eco31I	GGTCTC	3 cut(s)	159, 618, 951
Eco47I	GGWCC	2 cut(s)	352, 1456
Eco57I	CTGAAG	1 cut(s)	83
Eco91I	GGTNACC	1 cut(s)	1034
EcoO109I	RGGNCCY	1 cut(s)	606
EcoO65I	GGTNACC	1 cut(s)	1034
EcoRII	CCWGG	6 cut(s)	608, 640, 645, 802, 868, 1248
EcoT22I	ATGCAT	1 cut(s)	553
FaeI	CATG	7 cut(s)	305, 526, 683, 887, 922, 1175, 1390
FalI	AAGNNNNNCTT	2 cut(s)	725, 757
FaqI	GGGAC	3 cut(s)	894, 1161, 1442
FatI	CATG	7 cut(s)	301, 522, 679, 883, 918, 1171, 1386
FauI	CCCGC	1 cut(s)	284
FblI	GTMKAC	2 cut(s)	312, 1284
Fnu4HI	GCNGC	9 cut(s)	276, 296, 427, 1103, 1260, 1323, 1335, 1354, 1434
FokI	GGATG	5 cut(s)	430, 592, 852, 1232, 1287
Fsp4HI	GCNGC	9 cut(s)	276, 296, 427, 1103, 1260, 1323, 1335, 1354, 1434
FspBI	CTAG	5 cut(s)	77, 221, 1316, 1430, 1508
GlaI	GCGC	2 cut(s)	505, 1166
GluI	GCNGC	9 cut(s)	276, 296, 427, 1103, 1260, 1323, 1335, 1354, 1434
GsuI	CTGGAG	1 cut(s)	1242
HaeIII	GGCC	4 cut(s)	608, 645, 671, 1116
HapII	CCGG	1 cut(s)	410
HhaI	GCGC	2 cut(s)	506, 1167
Hin1II	CATG	7 cut(s)	305, 526, 683, 887, 922, 1175, 1390
Hin6I	GCGC	2 cut(s)	504, 1165
HinP1I	GCGC	2 cut(s)	504, 1165
HincII	GTYRAC	1 cut(s)	904
HindII	GTYRAC	1 cut(s)	904
HinfI	GANTC	9 cut(s)	8, 23, 80, 404, 820, 1304, 1402, 1438, 1527
HpaII	CCGG	1 cut(s)	410
HphI	GGTGA	2 cut(s)	186, 1079
Hpy166II	GTNNAC	5 cut(s)	160, 313, 904, 1091, 1285
Hpy188I	TCNGA	1 cut(s)	1407
Hpy188III	TCNNGA	7 cut(s)	20, 221, 285, 759, 956, 1052, 1442
Hpy8I	GTNNAC	5 cut(s)	160, 313, 904, 1091, 1285
Hpy99I	CGWCG	1 cut(s)	106
HpyAV	CCTTC	2 cut(s)	58, 1387
HpyCH4III	ACNGT	6 cut(s)	73, 441, 841, 1152, 1291, 1343
HpyCH4IV	ACGT	2 cut(s)	1047, 1093
HpyF10VI	GCNNNNNNNGC	3 cut(s)	370, 783, 1331
HpyF3I	CTNAG	2 cut(s)	794, 1125
HpySE526I	ACGT	2 cut(s)	1047, 1093
Hsp92II	CATG	7 cut(s)	305, 526, 683, 887, 922, 1175, 1390
HspAI	GCGC	2 cut(s)	504, 1165
Kzo9I	GATC	4 cut(s)	223, 497, 808, 859
LguI	GCTCTTC	1 cut(s)	1092
LmnI	GCTCC	3 cut(s)	106, 470, 1319
Lsp1109I	GCAGC	8 cut(s)	262, 307, 438, 1114, 1271, 1309, 1321, 1365
LweI	GCATC	4 cut(s)	376, 382, 536, 560
MaeI	CTAG	5 cut(s)	77, 221, 1316, 1430, 1508
MaeII	ACGT	2 cut(s)	1047, 1093
MaeIII	GTNAC	4 cut(s)	97, 833, 932, 1034
MalI	GATC	4 cut(s)	225, 499, 810, 861
MboI	GATC	4 cut(s)	223, 497, 808, 859
MflI	RGATCY	2 cut(s)	223, 808
MhlI	GDGCHC	2 cut(s)	1008, 1377
MluCI	AATT	7 cut(s)	253, 259, 449, 736, 1011, 1057, 1109
MlyI	GAGTC	3 cut(s)	17, 74, 829
MmeI	TCCRAC	1 cut(s)	855
Mph1103I	ATGCAT	1 cut(s)	553
MroXI	GAANNNNTTC	2 cut(s)	190, 1014
MseI	TTAA	3 cut(s)	257, 399, 788
MslI	CAYNNNNRTG	3 cut(s)	203, 306, 923
MspI	CCGG	1 cut(s)	410
MspR9I	CCNGG	6 cut(s)	610, 642, 647, 804, 870, 1250
Mva1269I	GAATGC	2 cut(s)	463, 1194
MvaI	CCWGG	6 cut(s)	610, 642, 647, 804, 870, 1250
MvnI	CGCG	3 cut(s)	504, 713, 1167
MwoI	GCNNNNNNNGC	3 cut(s)	370, 783, 1331
NdeII	GATC	4 cut(s)	223, 497, 808, 859
NlaIII	CATG	7 cut(s)	305, 526, 683, 887, 922, 1175, 1390
NlaIV	GGNNCC	3 cut(s)	354, 672, 1458
NmeAIII	GCCGAG	1 cut(s)	1157
NmuCI	GTSAC	1 cut(s)	833
NsiI	ATGCAT	1 cut(s)	553
NspI	RCATGY	3 cut(s)	683, 887, 1390
PasI	CCCWGGG	1 cut(s)	803
PciI	ACATGT	1 cut(s)	883
PciSI	GCTCTTC	1 cut(s)	1092
PctI	GAATGC	2 cut(s)	463, 1194
PdmI	GAANNNNTTC	2 cut(s)	190, 1014
PfeI	GAWTC	6 cut(s)	8, 404, 1304, 1402, 1438, 1527
PflFI	GACNNNGTC	1 cut(s)	839
PflMI	CCANNNNNTGG	1 cut(s)	1249
PkrI	GCNGC	9 cut(s)	277, 297, 428, 1104, 1261, 1324, 1336, 1355, 1435
PleI	GAGTC	3 cut(s)	17, 74, 828
PpsI	GAGTC	3 cut(s)	17, 74, 828
Ppu21I	YACGTR	1 cut(s)	1094
PscI	ACATGT	1 cut(s)	883
Psp6I	CCWGG	6 cut(s)	608, 640, 645, 802, 868, 1248
PspEI	GGTNACC	1 cut(s)	1034
PspGI	CCWGG	6 cut(s)	608, 640, 645, 802, 868, 1248
PspN4I	GGNNCC	3 cut(s)	354, 672, 1458
PspPI	GGNCC	4 cut(s)	352, 606, 670, 1456
PstNI	CAGNNNCTG	2 cut(s)	61, 1156
PsuI	RGATCY	2 cut(s)	223, 808
PsyI	GACNNNGTC	1 cut(s)	839
RsaI	GTAC	5 cut(s)	231, 799, 1046, 1092, 1391
RsaNI	GTAC	5 cut(s)	230, 798, 1045, 1091, 1390
RseI	CAYNNNNRTG	3 cut(s)	203, 306, 923
SapI	GCTCTTC	1 cut(s)	1092
SaqAI	TTAA	3 cut(s)	257, 399, 788
SatI	GCNGC	9 cut(s)	276, 296, 427, 1103, 1260, 1323, 1335, 1354, 1434
Sau3AI	GATC	4 cut(s)	223, 497, 808, 859
Sau96I	GGNCC	4 cut(s)	352, 606, 670, 1456
SchI	GAGTC	3 cut(s)	17, 74, 829
ScrFI	CCNGG	6 cut(s)	610, 642, 647, 804, 870, 1250
SduI	GDGCHC	2 cut(s)	1008, 1377
SfaNI	GCATC	4 cut(s)	376, 382, 536, 560
SfcI	CTRYAG	1 cut(s)	972
SgrAI	CRCCGGYG	1 cut(s)	409
SinI	GGWCC	2 cut(s)	352, 1456
SmiI	ATTTAAAT	1 cut(s)	258
SmiMI	CAYNNNNRTG	3 cut(s)	203, 306, 923
SmlI	CTYRAG	1 cut(s)	18
SmoI	CTYRAG	1 cut(s)	18
Sse9I	AATT	7 cut(s)	253, 259, 449, 736, 1011, 1057, 1109
SsiI	CCGC	4 cut(s)	291, 713, 1167, 1433
SspI	AATATT	2 cut(s)	339, 1267
SspMI	CTAG	5 cut(s)	77, 221, 1316, 1430, 1508
StyD4I	CCNGG	6 cut(s)	608, 640, 645, 802, 868, 1248
SwaI	ATTTAAAT	1 cut(s)	258
TaaI	ACNGT	6 cut(s)	73, 441, 841, 1152, 1291, 1343
TaiI	ACGT	2 cut(s)	1050, 1096
TaqI	TCGA	1 cut(s)	1053
TasI	AATT	7 cut(s)	253, 259, 449, 736, 1011, 1057, 1109
TauI	GCSGC	1 cut(s)	1436
TfiI	GAWTC	6 cut(s)	8, 404, 1304, 1402, 1438, 1527
Tru1I	TTAA	3 cut(s)	257, 399, 788
Tru9I	TTAA	3 cut(s)	257, 399, 788
TscAI	CASTG	4 cut(s)	130, 446, 758, 844
TseFI	GTSAC	1 cut(s)	833
TseI	GCWGC	8 cut(s)	275, 295, 426, 1102, 1259, 1322, 1334, 1353
Tsp45I	GTSAC	1 cut(s)	833
TspDTI	ATGAA	5 cut(s)	511, 525, 576, 596, 1493
TspGWI	ACGGA	1 cut(s)	119
TspRI	CASTG	4 cut(s)	130, 446, 758, 844
Tth111I	GACNNNGTC	1 cut(s)	839
Van91I	CCANNNNNTGG	1 cut(s)	1249
VpaK11BI	GGWCC	2 cut(s)	352, 1456
XapI	RAATTY	4 cut(s)	259, 1011, 1057, 1109
XbaI	TCTAGA	1 cut(s)	220
XceI	RCATGY	3 cut(s)	683, 887, 1390
XcmI	CCANNNNNNNNNTGG	1 cut(s)	364
XmiI	GTMKAC	2 cut(s)	312, 1284
XmnI	GAANNNNTTC	2 cut(s)	190, 1014
XspI	CTAG	5 cut(s)	77, 221, 1316, 1430, 1508
Zsp2I	ATGCAT	1 cut(s)	553

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.