No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51010 |
| fragaria_vesca | FvH4_5g09700 |
| malus_domestica | MD06G1129100.v1.1 MD14G1146000.v1.1 |
| prunus_persica | Prupe.5G140400_v2.0.a1 Prupe.5G140400_v2.0.a1 Prupe.5G140400_v2.0.a1 |
| pyrus_communis | pycom14g12100 |
| rosa_chinensis | RchiOBHm_Chr7g0188541 |
| rosa_laevigata | RLG00000004685 |
| rosa_multiflora | Rmu_sc0001576.1_g000010 Rmu_sc0016427.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00266270 |
| rosa_rugosa | Rorug06G0491100 |
| rosa_samantha | Rh7AG096000 Rh7BG097800 Rh7CG098800 Rh7DG098000 |
| rosa_wichuraiana | Rw7G008290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 380 |
| AciI | CCGC | 2 cut(s) | 207, 289 |
| AclWI | GGATC | 1 cut(s) | 36 |
| AluBI | AGCT | 6 cut(s) | 13, 299, 359, 364, 425, 434 |
| AluI | AGCT | 6 cut(s) | 13, 299, 359, 364, 425, 434 |
| Alw21I | GWGCWC | 1 cut(s) | 366 |
| Alw26I | GTCTC | 3 cut(s) | 138, 178, 366 |
| AlwI | GGATC | 1 cut(s) | 36 |
| ApeKI | GCWGC | 3 cut(s) | 10, 275, 431 |
| BanII | GRGCYC | 1 cut(s) | 366 |
| Bbv12I | GWGCWC | 1 cut(s) | 366 |
| BbvI | GCAGC | 3 cut(s) | 22, 262, 443 |
| BceAI | ACGGC | 3 cut(s) | 183, 302, 365 |
| BcoDI | GTCTC | 3 cut(s) | 138, 178, 366 |
| BfaI | CTAG | 2 cut(s) | 156, 351 |
| BfmI | CTRYAG | 1 cut(s) | 399 |
| BisI | GCNGC | 3 cut(s) | 11, 276, 432 |
| BlpI | GCTNAGC | 1 cut(s) | 360 |
| BlsI | GCNGC | 3 cut(s) | 12, 277, 433 |
| BpmI | CTGGAG | 1 cut(s) | 62 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 360 |
| BsaJI | CCNNGG | 1 cut(s) | 48 |
| Bse1I | ACTGG | 1 cut(s) | 266 |
| BseDI | CCNNGG | 1 cut(s) | 48 |
| BseMII | CTCAG | 1 cut(s) | 351 |
| BseNI | ACTGG | 1 cut(s) | 266 |
| BseRI | GAGGAG | 1 cut(s) | 166 |
| BseXI | GCAGC | 3 cut(s) | 22, 262, 443 |
| BsiHKAI | GWGCWC | 1 cut(s) | 366 |
| BsiSI | CCGG | 1 cut(s) | 36 |
| BsmAI | GTCTC | 3 cut(s) | 138, 178, 366 |
| BsmBI | CGTCTC | 1 cut(s) | 366 |
| Bsp1286I | GDGCHC | 1 cut(s) | 366 |
| Bsp143I | GATC | 2 cut(s) | 41, 83 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 360 |
| BspACI | CCGC | 2 cut(s) | 207, 289 |
| BspCNI | CTCAG | 1 cut(s) | 352 |
| BspHI | TCATGA | 1 cut(s) | 461 |
| BspPI | GGATC | 1 cut(s) | 36 |
| BsrI | ACTGG | 1 cut(s) | 266 |
| BssECI | CCNNGG | 1 cut(s) | 48 |
| BssMI | GATC | 2 cut(s) | 41, 83 |
| BstC8I | GCNNGC | 1 cut(s) | 186 |
| BstDEI | CTNAG | 2 cut(s) | 180, 360 |
| BstDSI | CCRYGG | 1 cut(s) | 48 |
| BstKTI | GATC | 2 cut(s) | 44, 86 |
| BstMAI | GTCTC | 3 cut(s) | 138, 178, 366 |
| BstMBI | GATC | 2 cut(s) | 41, 83 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 204, 356, 431 |
| BstNSI | RCATGY | 1 cut(s) | 307 |
| BstSFI | CTRYAG | 1 cut(s) | 399 |
| BstV1I | GCAGC | 3 cut(s) | 22, 262, 443 |
| BstX2I | RGATCY | 1 cut(s) | 41 |
| BstYI | RGATCY | 1 cut(s) | 41 |
| BtgI | CCRYGG | 1 cut(s) | 48 |
| BtgZI | GCGATG | 1 cut(s) | 20 |
| BtsIMutI | CAGTG | 1 cut(s) | 273 |
| Cac8I | GCNNGC | 1 cut(s) | 186 |
| CciI | TCATGA | 1 cut(s) | 461 |
| CviAII | CATG | 3 cut(s) | 166, 304, 462 |
| DdeI | CTNAG | 2 cut(s) | 180, 360 |
| DpnI | GATC | 2 cut(s) | 43, 85 |
| DpnII | GATC | 2 cut(s) | 41, 83 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 380 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 380 |
| Ecl136II | GAGCTC | 1 cut(s) | 364 |
| Eco24I | GRGCYC | 1 cut(s) | 366 |
| Eco53kI | GAGCTC | 1 cut(s) | 364 |
| EcoICRI | GAGCTC | 1 cut(s) | 364 |
| EcoT38I | GRGCYC | 1 cut(s) | 366 |
| Esp3I | CGTCTC | 1 cut(s) | 366 |
| FaeI | CATG | 3 cut(s) | 169, 307, 465 |
| FaiI | YATR | 7 cut(s) | 167, 192, 213, 305, 401, 447, 463 |
| FatI | CATG | 3 cut(s) | 165, 303, 461 |
| FauI | CCCGC | 1 cut(s) | 200 |
| Fnu4HI | GCNGC | 3 cut(s) | 11, 276, 432 |
| FriOI | GRGCYC | 1 cut(s) | 366 |
| Fsp4HI | GCNGC | 3 cut(s) | 11, 276, 432 |
| FspBI | CTAG | 2 cut(s) | 156, 351 |
| GluI | GCNGC | 3 cut(s) | 11, 276, 432 |
| GsuI | CTGGAG | 1 cut(s) | 62 |
| HapII | CCGG | 1 cut(s) | 36 |
| Hin1II | CATG | 3 cut(s) | 169, 307, 465 |
| HincII | GTYRAC | 1 cut(s) | 328 |
| HindII | GTYRAC | 1 cut(s) | 328 |
| HinfI | GANTC | 2 cut(s) | 67, 159 |
| HpaII | CCGG | 1 cut(s) | 36 |
| Hpy166II | GTNNAC | 1 cut(s) | 328 |
| Hpy188I | TCNGA | 3 cut(s) | 21, 63, 122 |
| Hpy188III | TCNNGA | 3 cut(s) | 79, 385, 462 |
| Hpy8I | GTNNAC | 1 cut(s) | 328 |
| Hpy99I | CGWCG | 3 cut(s) | 25, 67, 386 |
| HpyAV | CCTTC | 1 cut(s) | 382 |
| HpyCH4V | TGCA | 2 cut(s) | 10, 410 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 204, 356, 431 |
| HpyF3I | CTNAG | 2 cut(s) | 180, 360 |
| Hsp92II | CATG | 3 cut(s) | 169, 307, 465 |
| Kzo9I | GATC | 2 cut(s) | 41, 83 |
| LmnI | GCTCC | 3 cut(s) | 157, 283, 369 |
| LpnPI | CCDG | 5 cut(s) | 49, 92, 261, 279, 321 |
| Lsp1109I | GCAGC | 3 cut(s) | 22, 262, 443 |
| MaeI | CTAG | 2 cut(s) | 156, 351 |
| MaeIII | GTNAC | 1 cut(s) | 243 |
| MalI | GATC | 2 cut(s) | 43, 85 |
| MboI | GATC | 2 cut(s) | 41, 83 |
| MboII | GAAGA | 1 cut(s) | 51 |
| MflI | RGATCY | 1 cut(s) | 41 |
| MhlI | GDGCHC | 1 cut(s) | 366 |
| MluCI | AATT | 1 cut(s) | 405 |
| MlyI | GAGTC | 1 cut(s) | 61 |
| MmeI | TCCRAC | 3 cut(s) | 44, 86, 95 |
| MnlI | CCTC | 7 cut(s) | 27, 55, 69, 86, 105, 157, 187 |
| MspI | CCGG | 1 cut(s) | 36 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 204, 356, 431 |
| NdeII | GATC | 2 cut(s) | 41, 83 |
| NlaIII | CATG | 3 cut(s) | 169, 307, 465 |
| NspI | RCATGY | 1 cut(s) | 307 |
| PagI | TCATGA | 1 cut(s) | 461 |
| PfeI | GAWTC | 1 cut(s) | 159 |
| PkrI | GCNGC | 3 cut(s) | 12, 277, 433 |
| PleI | GAGTC | 1 cut(s) | 61 |
| PpsI | GAGTC | 1 cut(s) | 61 |
| Psp124BI | GAGCTC | 1 cut(s) | 366 |
| PsuI | RGATCY | 1 cut(s) | 41 |
| SacI | GAGCTC | 1 cut(s) | 366 |
| SatI | GCNGC | 3 cut(s) | 11, 276, 432 |
| Sau3AI | GATC | 2 cut(s) | 41, 83 |
| SchI | GAGTC | 1 cut(s) | 61 |
| SduI | GDGCHC | 1 cut(s) | 366 |
| SfcI | CTRYAG | 1 cut(s) | 399 |
| Sse9I | AATT | 1 cut(s) | 405 |
| SsiI | CCGC | 2 cut(s) | 207, 289 |
| SspMI | CTAG | 2 cut(s) | 156, 351 |
| SstI | GAGCTC | 1 cut(s) | 366 |
| TaqI | TCGA | 1 cut(s) | 107 |
| TasI | AATT | 1 cut(s) | 405 |
| TfiI | GAWTC | 1 cut(s) | 159 |
| TscAI | CASTG | 1 cut(s) | 273 |
| TseI | GCWGC | 3 cut(s) | 10, 275, 431 |
| TspGWI | ACGGA | 1 cut(s) | 37 |
| TspRI | CASTG | 1 cut(s) | 273 |
| XceI | RCATGY | 1 cut(s) | 307 |
| XspI | CTAG | 2 cut(s) | 156, 351 |