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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G57340 AT5G57340 |
| fragaria_vesca | FvH4_4g07760 FvH4_4g07760 |
| malus_domestica | MD13G1247000.v1.1 MD16G1253900.v1.1 |
| prunus_persica | Prupe.1G081700_v2.0.a1 Prupe.1G081700_v2.0.a1 Prupe.1G081700_v2.0.a1 Prupe.1G081700_v2.0.a1 |
| pyrus_communis | pycom13g21790 pycom16g21510 |
| rosa_chinensis | RchiOBHm_Chr4g0400841 |
| rosa_laevigata | RLG00000009174 |
| rosa_roxburghii | Rroxscaffold_5G00345690 |
| rosa_rugosa | Rorug04G0026100 |
| rosa_samantha | Rh4AG104200 Rh4BG099400 Rh4CG112500 Rh4DG096100 |
| rosa_wichuraiana | Rw4G008420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 647 |
| AccI | GTMKAC | 1 cut(s) | 94 |
| AciI | CCGC | 1 cut(s) | 609 |
| AclWI | GGATC | 2 cut(s) | 423, 660 |
| AcyI | GRCGYC | 1 cut(s) | 644 |
| AfaI | GTAC | 2 cut(s) | 243, 640 |
| AgsI | TTSAA | 3 cut(s) | 176, 345, 686 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 514 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 295, 327 |
| AluBI | AGCT | 2 cut(s) | 250, 633 |
| AluI | AGCT | 2 cut(s) | 250, 633 |
| Alw26I | GTCTC | 2 cut(s) | 107, 661 |
| AlwI | GGATC | 2 cut(s) | 423, 660 |
| ApeKI | GCWGC | 1 cut(s) | 630 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 364, 709 |
| AspS9I | GGNCC | 1 cut(s) | 611 |
| AsuC2I | CCSGG | 1 cut(s) | 339 |
| AvaII | GGWCC | 1 cut(s) | 611 |
| BbsI | GAAGAC | 1 cut(s) | 456 |
| BbvI | GCAGC | 1 cut(s) | 642 |
| BccI | CCATC | 1 cut(s) | 203 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 361, 395 |
| BclI | TGATCA | 1 cut(s) | 58 |
| BcnI | CCSGG | 1 cut(s) | 339 |
| BcoDI | GTCTC | 2 cut(s) | 107, 661 |
| BisI | GCNGC | 1 cut(s) | 631 |
| BlsI | GCNGC | 1 cut(s) | 632 |
| Bme1390I | CCNGG | 1 cut(s) | 339 |
| Bme18I | GGWCC | 1 cut(s) | 611 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 514 |
| BmgT120I | GGNCC | 1 cut(s) | 611 |
| BmrFI | CCNGG | 1 cut(s) | 339 |
| BpiI | GAAGAC | 1 cut(s) | 456 |
| BpuEI | CTTGAG | 1 cut(s) | 619 |
| BpuMI | CCSGG | 1 cut(s) | 339 |
| BsaBI | GATNNNNATC | 1 cut(s) | 538 |
| BsaHI | GRCGYC | 1 cut(s) | 644 |
| BsaI | GGTCTC | 1 cut(s) | 661 |
| BsaWI | WCCGGW | 1 cut(s) | 356 |
| Bse8I | GATNNNNATC | 1 cut(s) | 538 |
| BseJI | GATNNNNATC | 1 cut(s) | 538 |
| BseXI | GCAGC | 1 cut(s) | 642 |
| BsiSI | CCGG | 2 cut(s) | 339, 357 |
| BsmAI | GTCTC | 2 cut(s) | 107, 661 |
| BsmBI | CGTCTC | 1 cut(s) | 107 |
| Bso31I | GGTCTC | 1 cut(s) | 661 |
| Bsp143I | GATC | 5 cut(s) | 12, 58, 415, 533, 652 |
| BspACI | CCGC | 1 cut(s) | 609 |
| BspPI | GGATC | 2 cut(s) | 423, 660 |
| BspTNI | GGTCTC | 1 cut(s) | 661 |
| BssMI | GATC | 5 cut(s) | 12, 58, 415, 533, 652 |
| BssNI | GRCGYC | 1 cut(s) | 644 |
| Bst4CI | ACNGT | 1 cut(s) | 319 |
| Bst6I | CTCTTC | 2 cut(s) | 420, 659 |
| BstACI | GRCGYC | 1 cut(s) | 644 |
| BstC8I | GCNNGC | 1 cut(s) | 213 |
| BstDEI | CTNAG | 1 cut(s) | 692 |
| BstKTI | GATC | 5 cut(s) | 15, 61, 418, 536, 655 |
| BstMAI | GTCTC | 2 cut(s) | 107, 661 |
| BstMBI | GATC | 5 cut(s) | 12, 58, 415, 533, 652 |
| BstSCI | CCNGG | 1 cut(s) | 337 |
| BstV1I | GCAGC | 1 cut(s) | 642 |
| BstV2I | GAAGAC | 1 cut(s) | 456 |
| Cac8I | GCNNGC | 1 cut(s) | 213 |
| Cfr13I | GGNCC | 1 cut(s) | 611 |
| Csp6I | GTAC | 2 cut(s) | 242, 639 |
| CviAII | CATG | 1 cut(s) | 505 |
| CviJI | RGCY | 6 cut(s) | 45, 215, 250, 306, 633, 679 |
| CviKI_1 | RGCY | 6 cut(s) | 45, 215, 250, 306, 633, 679 |
| CviQI | GTAC | 2 cut(s) | 242, 639 |
| DdeI | CTNAG | 1 cut(s) | 692 |
| DpnI | GATC | 5 cut(s) | 14, 60, 417, 535, 654 |
| DpnII | GATC | 5 cut(s) | 12, 58, 415, 533, 652 |
| DriI | GACNNNNNGTC | 1 cut(s) | 514 |
| Eam1104I | CTCTTC | 2 cut(s) | 420, 659 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 514 |
| EarI | CTCTTC | 2 cut(s) | 420, 659 |
| Eco31I | GGTCTC | 1 cut(s) | 661 |
| Eco47I | GGWCC | 1 cut(s) | 611 |
| Esp3I | CGTCTC | 1 cut(s) | 107 |
| FaeI | CATG | 1 cut(s) | 508 |
| FatI | CATG | 1 cut(s) | 504 |
| FbaI | TGATCA | 1 cut(s) | 58 |
| FblI | GTMKAC | 1 cut(s) | 94 |
| Fnu4HI | GCNGC | 1 cut(s) | 631 |
| Fsp4HI | GCNGC | 1 cut(s) | 631 |
| GluI | GCNGC | 1 cut(s) | 631 |
| HapII | CCGG | 2 cut(s) | 339, 357 |
| Hin1I | GRCGYC | 1 cut(s) | 644 |
| Hin1II | CATG | 1 cut(s) | 508 |
| HincII | GTYRAC | 4 cut(s) | 95, 120, 322, 519 |
| HindII | GTYRAC | 4 cut(s) | 95, 120, 322, 519 |
| HinfI | GANTC | 3 cut(s) | 101, 191, 286 |
| HpaI | GTTAAC | 1 cut(s) | 322 |
| HpaII | CCGG | 2 cut(s) | 339, 357 |
| Hpy166II | GTNNAC | 4 cut(s) | 95, 120, 322, 519 |
| Hpy188I | TCNGA | 4 cut(s) | 77, 200, 544, 561 |
| Hpy188III | TCNNGA | 4 cut(s) | 173, 345, 656, 714 |
| Hpy8I | GTNNAC | 4 cut(s) | 95, 120, 322, 519 |
| Hpy99I | CGWCG | 4 cut(s) | 412, 415, 646, 649 |
| HpyAV | CCTTC | 1 cut(s) | 131 |
| HpyCH4III | ACNGT | 1 cut(s) | 319 |
| HpyCH4IV | ACGT | 3 cut(s) | 116, 524, 644 |
| HpyCH4V | TGCA | 1 cut(s) | 211 |
| HpyF3I | CTNAG | 1 cut(s) | 692 |
| HpySE526I | ACGT | 3 cut(s) | 116, 524, 644 |
| Hsp92I | GRCGYC | 1 cut(s) | 644 |
| Hsp92II | CATG | 1 cut(s) | 508 |
| Ksp22I | TGATCA | 1 cut(s) | 58 |
| KspAI | GTTAAC | 1 cut(s) | 322 |
| Kzo9I | GATC | 5 cut(s) | 12, 58, 415, 533, 652 |
| LpnPI | CCDG | 4 cut(s) | 224, 352, 354, 370 |
| Lsp1109I | GCAGC | 1 cut(s) | 642 |
| MaeII | ACGT | 3 cut(s) | 116, 524, 644 |
| MalI | GATC | 5 cut(s) | 14, 60, 417, 535, 654 |
| MboI | GATC | 5 cut(s) | 12, 58, 415, 533, 652 |
| MboII | GAAGA | 9 cut(s) | 143, 146, 233, 437, 456, 459, 673, 676, 702 |
| MluCI | AATT | 3 cut(s) | 24, 440, 547 |
| MlyI | GAGTC | 1 cut(s) | 280 |
| MmeI | TCCRAC | 1 cut(s) | 630 |
| MnlI | CCTC | 3 cut(s) | 121, 389, 681 |
| MroXI | GAANNNNTTC | 2 cut(s) | 364, 709 |
| MseI | TTAA | 6 cut(s) | 47, 87, 152, 231, 321, 699 |
| MslI | CAYNNNNRTG | 1 cut(s) | 623 |
| MspI | CCGG | 2 cut(s) | 339, 357 |
| MspR9I | CCNGG | 1 cut(s) | 339 |
| NciI | CCSGG | 1 cut(s) | 339 |
| NdeII | GATC | 5 cut(s) | 12, 58, 415, 533, 652 |
| NlaIII | CATG | 1 cut(s) | 508 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 429, 521 |
| PdmI | GAANNNNTTC | 2 cut(s) | 364, 709 |
| PfeI | GAWTC | 2 cut(s) | 101, 191 |
| PkrI | GCNGC | 1 cut(s) | 632 |
| PleI | GAGTC | 1 cut(s) | 280 |
| PpsI | GAGTC | 1 cut(s) | 280 |
| PspPI | GGNCC | 1 cut(s) | 611 |
| RsaI | GTAC | 2 cut(s) | 243, 640 |
| RsaNI | GTAC | 2 cut(s) | 242, 639 |
| RseI | CAYNNNNRTG | 1 cut(s) | 623 |
| SalI | GTCGAC | 1 cut(s) | 93 |
| SaqAI | TTAA | 6 cut(s) | 47, 87, 152, 231, 321, 699 |
| SatI | GCNGC | 1 cut(s) | 631 |
| Sau3AI | GATC | 5 cut(s) | 12, 58, 415, 533, 652 |
| Sau96I | GGNCC | 1 cut(s) | 611 |
| SchI | GAGTC | 1 cut(s) | 280 |
| ScrFI | CCNGG | 1 cut(s) | 339 |
| SinI | GGWCC | 1 cut(s) | 611 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 623 |
| SmlI | CTYRAG | 1 cut(s) | 634 |
| SmoI | CTYRAG | 1 cut(s) | 634 |
| Sse9I | AATT | 3 cut(s) | 24, 440, 547 |
| SsiI | CCGC | 1 cut(s) | 609 |
| SspI | AATATT | 1 cut(s) | 311 |
| StyD4I | CCNGG | 1 cut(s) | 337 |
| TaaI | ACNGT | 1 cut(s) | 319 |
| TaiI | ACGT | 3 cut(s) | 119, 527, 647 |
| TaqI | TCGA | 5 cut(s) | 94, 381, 423, 438, 655 |
| TasI | AATT | 3 cut(s) | 24, 440, 547 |
| TfiI | GAWTC | 2 cut(s) | 101, 191 |
| Tru1I | TTAA | 6 cut(s) | 47, 87, 152, 231, 321, 699 |
| Tru9I | TTAA | 6 cut(s) | 47, 87, 152, 231, 321, 699 |
| TseI | GCWGC | 1 cut(s) | 630 |
| TspDTI | ATGAA | 2 cut(s) | 61, 459 |
| TspGWI | ACGGA | 1 cut(s) | 428 |
| VpaK11BI | GGWCC | 1 cut(s) | 611 |
| XmiI | GTMKAC | 1 cut(s) | 94 |
| XmnI | GAANNNNTTC | 2 cut(s) | 364, 709 |
| ZraI | GACGTC | 1 cut(s) | 645 |