AT5G58950

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
23800856 .. 23803684
2829 bp
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UTR
Exon/CDS
Intron
AT5G58950.1

Sequence Viewer

Length: 1578 bp
ATGGATGAAGAGGCTACTTCGTGGATTAGGAGGGCTAAGTTTTCTCAAACGGTTTCTTATCGTTTGAATTCTTCAAAGTTAGCTTCTCTTCCTTTTATGATAAACCAAGATAAGTTTTCTGGATTAAAAGCTATACCTCAGAGATCATCTTCTTCGTCGTCGGCATCATCATCGGATCCTAAGTTGGTTTCGAGTAACTCACAGACTACGGGAGATACTTCGAGTTTGGAAGCTGCTGATGTATATGTTGTTGATTCGGAAATACAGACAAACCCGGTTACTCATAAGCAGAGATCTGTTTCTCCTTCGCCTCAGATGGCTGTTCCCGATGTGTTTAAGGAAGCGAGGTCTGAGCGTAAGAGATTTTCTACTCCACATCCAAGAAGAGTGGAATCGGAAAAGGGAATGAAGCCTAAGTTATCTCATAAAAACTCCTTTGACAAGAGATCATTTAACTTGCGGTCTCCTTCAGGTCCTATCAGAGATCTTGGCACTTTGAGAATTCAAGAGAGGGTCAAGAGCAAGAAGGACACTGGATGGTCTAAGCTTTTTGATAATACTGGTCGTAGAGTGAGTGCTGTGGAAGCTTCTGAAGAGTTCCGTGTTGATATGTCAAAGCTGTTCTTTGGGCTTAAGTTTGCTCATGGTTTATACAGCCGGCTATATCATGGTAAGTATGAAGATAAAGCTGTTGCCGTGAAGCTTATCACTGTACCTGATGATGACGATAATGGATGCTTGGGAGCTCGTTTAGAGAAACAGTTTACCAAGGAAGTGACCCTTTTGTCTCGATTGACCCATCCAAATGTTATAAAGTTTGTTGGAGCGTACAAAGATCCGCCTGTATATTGTGTCCTCACGCAGTATTTACCTGAAGGATCTTTAAGATCTTTTCTGCACAAGCCTGAGAATAGGTCTCTTCCTTTGAAAAAGCTTATAGAGTTTGCTATAGATATTGCTAGAGGGATGGAATATATTCACTCACGACGCATAATTCATCGGGATCTTAAGCCAGAAAATGTATTGATCGACGAAGAATTCCATTTGAAGATCGCTGACTTTGGCATAGCGTGCGAGGAGGAGTACTGTGACATGTTGGCTGATGACCCCGGAACATATAGGTGGATGGCACCTGAAATGATAAAACGGAAACCACATGGACGTAAGGCCGATGTATACAGCTTTGGACTCGTTTTATGGGAAATGGTAGCTGGAGCAATCCCATATGAGGACATGAATCCTATTCAAGCTGCTTTCGCAGTCGTACATAAGAACATTAGGCCAGCTATCCCGGGAGATTGTCCAGTAGCCATGAAAGCTCTGATAGAGCAGTGTTGGTCGGTTGCACCAGATAAGAGACCCGAGTTCTGGCAGATAGTGAAAGTGCTTGAACAGTTTGCGATATCACTGGAACGTGAAGGGAACCTGAATCTGTCTTCGAGCAAGATCTGTAAGGACCCAAGGAAAGGTCTGAAACACTGGATCCAGAAGCTTGGACCAGTCCACGCAGGAGGAGGCGGTGGCAGCAGCAGCAGCGGCCTTGGTGGCTCAGCCTTGCCGAAGCCTAAATTCGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

525

Amino Acids

58.86

Weight (kDa)

9.33

Isoelectric Point (pI)

49.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 212 - 463 7.2e-60 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 216 - 461 1.6e-51 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 812
AasI GACNNNNNNGTC 1 cut(s) 784
AccB1I GGYRCC 1 cut(s) 1129
AccI GTMKAC 1 cut(s) 1176
AciI CCGC 4 cut(s) 460, 839, 1518, 1536
AclWI GGATC 7 cut(s) 170, 183, 830, 886, 1011, 1477, 1490
AcsI RAATTY 4 cut(s) 67, 501, 1037, 1568
AcuI CTGAAG 3 cut(s) 453, 612, 894
AfaI GTAC 4 cut(s) 714, 830, 1085, 1266
AfiI CCNNNNNNNGG 3 cut(s) 1228, 1368, 1466
AflII CTTAAG 2 cut(s) 632, 1007
AflIII ACRYGT 1 cut(s) 1092
AgsI TTSAA 7 cut(s) 67, 75, 506, 928, 1048, 1247, 1391
Alw21I GWGCWC 1 cut(s) 748
Alw26I GTCTC 4 cut(s) 468, 792, 921, 1351
AlwI GGATC 7 cut(s) 170, 183, 830, 886, 1011, 1477, 1490
Ama87I CYCGRG 2 cut(s) 1291, 1361
AoxI GGCC 3 cut(s) 1167, 1280, 1537
ApeKI GCWGC 6 cut(s) 233, 1250, 1524, 1527, 1530, 1533
ApoI RAATTY 4 cut(s) 67, 501, 1037, 1568
Asp700I GAANNNNTTC 1 cut(s) 975
AspS9I GGNCC 3 cut(s) 473, 1456, 1496
AsuC2I CCSGG 4 cut(s) 275, 1110, 1292, 1293
AvaI CYCGRG 2 cut(s) 1291, 1361
AvaII GGWCC 3 cut(s) 473, 1456, 1496
BamHI GGATCC 2 cut(s) 175, 1482
BanI GGYRCC 1 cut(s) 1129
BanII GRGCYC 1 cut(s) 748
BbsI GAAGAC 1 cut(s) 1428
Bbv12I GWGCWC 1 cut(s) 748
BbvI GCAGC 6 cut(s) 220, 1237, 1536, 1539, 1542, 1545
BccI CCATC 5 cut(s) 310, 531, 807, 961, 1120
BceAI ACGGC 1 cut(s) 680
BcgI CGANNNNNNTGC 2 cut(s) 153, 187
BcnI CCSGG 4 cut(s) 275, 1110, 1292, 1293
BcoDI GTCTC 4 cut(s) 468, 792, 921, 1351
BfaI CTAG 1 cut(s) 960
BfmI CTRYAG 1 cut(s) 948
BfrI CTTAAG 2 cut(s) 632, 1007
BglI GCCNNNNNGGC 1 cut(s) 1545
BglII AGATCT 4 cut(s) 293, 484, 887, 1446
BisI GCNGC 7 cut(s) 234, 1251, 1525, 1528, 1531, 1534, 1537
BlpI GCTNAGC 1 cut(s) 1549
BlsI GCNGC 7 cut(s) 235, 1252, 1526, 1529, 1532, 1535, 1538
BmcAI AGTACT 1 cut(s) 1085
Bme1390I CCNGG 4 cut(s) 275, 1110, 1292, 1293
Bme18I GGWCC 3 cut(s) 473, 1456, 1496
BmeT110I CYCGRG 2 cut(s) 1291, 1361
BmgT120I GGNCC 3 cut(s) 473, 1456, 1496
BmiI GGNNCC 5 cut(s) 177, 1131, 1424, 1458, 1484
BmrFI CCNGG 4 cut(s) 275, 1110, 1292, 1293
BmsI GCATC 2 cut(s) 173, 725
BpiI GAAGAC 1 cut(s) 1428
BpmI CTGGAG 1 cut(s) 1233
Bpu1102I GCTNAGC 1 cut(s) 1549
BpuMI CCSGG 4 cut(s) 275, 1110, 1292, 1293
BsaI GGTCTC 3 cut(s) 468, 921, 1351
BsaJI CCNNGG 5 cut(s) 768, 1108, 1291, 1460, 1540
Bsc4I CCNNNNNNNGG 3 cut(s) 1228, 1368, 1466
Bse118I RCCGGY 1 cut(s) 657
Bse1I ACTGG 6 cut(s) 538, 565, 1304, 1413, 1484, 1499
BseDI CCNNGG 5 cut(s) 768, 1108, 1291, 1460, 1540
BseGI GGATG 7 cut(s) 10, 376, 542, 740, 799, 972, 1131
BseLI CCNNNNNNNGG 3 cut(s) 1228, 1368, 1466
BseMII CTCAG 5 cut(s) 152, 326, 342, 897, 1563
BseNI ACTGG 6 cut(s) 538, 565, 1304, 1413, 1484, 1499
BseRI GAGGAG 3 cut(s) 1091, 1094, 1527
BseXI GCAGC 6 cut(s) 220, 1237, 1536, 1539, 1542, 1545
BsgI GTGCAG 1 cut(s) 881
BshFI GGCC 3 cut(s) 1169, 1282, 1539
BshNI GGYRCC 1 cut(s) 1129
BsiHKAI GWGCWC 1 cut(s) 748
BsiHKCI CYCGRG 2 cut(s) 1291, 1361
BsiSI CCGG 4 cut(s) 275, 658, 1110, 1292
BslI CCNNNNNNNGG 3 cut(s) 1228, 1368, 1466
BsmAI GTCTC 4 cut(s) 468, 792, 921, 1351
BsnI GGCC 3 cut(s) 1169, 1282, 1539
Bso31I GGTCTC 3 cut(s) 468, 921, 1351
BsoBI CYCGRG 2 cut(s) 1291, 1361
Bsp1286I GDGCHC 1 cut(s) 748
Bsp1720I GCTNAGC 1 cut(s) 1549
BspACI CCGC 4 cut(s) 460, 839, 1518, 1536
BspANI GGCC 3 cut(s) 1169, 1282, 1539
BspCNI CTCAG 5 cut(s) 151, 325, 343, 898, 1562
BspLI GGNNCC 5 cut(s) 177, 1131, 1424, 1458, 1484
BspPI GGATC 7 cut(s) 170, 183, 830, 886, 1011, 1477, 1490
BspT107I GGYRCC 1 cut(s) 1129
BspTI CTTAAG 2 cut(s) 632, 1007
BspTNI GGTCTC 3 cut(s) 468, 921, 1351
BsrFI RCCGGY 1 cut(s) 657
BsrI ACTGG 6 cut(s) 538, 565, 1304, 1413, 1484, 1499
BssAI RCCGGY 1 cut(s) 657
BssECI CCNNGG 5 cut(s) 768, 1108, 1291, 1460, 1540
BssNAI GTATAC 1 cut(s) 1177
BssT1I CCWWGG 3 cut(s) 768, 1460, 1540
Bst1107I GTATAC 1 cut(s) 1177
Bst4CI ACNGT 5 cut(s) 52, 712, 762, 1088, 1395
Bst6I CTCTTC 5 cut(s) 3, 93, 379, 588, 924
BstAFI CTTAAG 2 cut(s) 632, 1007
BstAPI GCANNNNNTGC 1 cut(s) 1071
BstC8I GCNNGC 3 cut(s) 659, 1072, 1284
BstDEI CTNAG 9 cut(s) 36, 138, 180, 312, 351, 414, 543, 906, 1549
BstF5I GGATG 7 cut(s) 10, 376, 542, 740, 799, 972, 1131
BstMAI GTCTC 4 cut(s) 468, 792, 921, 1351
BstMWI GCNNNNNNNGC 9 cut(s) 584, 1071, 1256, 1316, 1524, 1530, 1533, 1536, 1545
BstNSI RCATGY 1 cut(s) 1096
BstSCI CCNGG 4 cut(s) 273, 1108, 1290, 1291
BstSFI CTRYAG 1 cut(s) 948
BstV1I GCAGC 6 cut(s) 220, 1237, 1536, 1539, 1542, 1545
BstV2I GAAGAC 1 cut(s) 1428
BstX2I RGATCY 9 cut(s) 175, 293, 484, 835, 878, 887, 1003, 1446, 1482
BstXI CCANNNNNNTGG 1 cut(s) 1493
BstYI RGATCY 9 cut(s) 175, 293, 484, 835, 878, 887, 1003, 1446, 1482
BstZ17I GTATAC 1 cut(s) 1177
BsuRI GGCC 3 cut(s) 1169, 1282, 1539
BtsCI GGATG 7 cut(s) 10, 376, 542, 740, 799, 972, 1131
BtsI GCAGTG 1 cut(s) 1337
BtsIMutI CAGTG 5 cut(s) 531, 708, 1337, 1406, 1477
Cac8I GCNNGC 3 cut(s) 659, 1072, 1284
Cfr10I RCCGGY 1 cut(s) 657
Cfr13I GGNCC 3 cut(s) 473, 1456, 1496
Cfr9I CCCGGG 1 cut(s) 1291
CseI GACGC 1 cut(s) 996
Csp6I GTAC 4 cut(s) 713, 829, 1084, 1265
CspCI CAANNNNNGTGG 2 cut(s) 369, 404
CviAII CATG 6 cut(s) 644, 668, 1093, 1157, 1234, 1312
CviQI GTAC 4 cut(s) 713, 829, 1084, 1265
DdeI CTNAG 9 cut(s) 36, 138, 180, 312, 351, 414, 543, 906, 1549
DrdI GACNNNNNNGTC 1 cut(s) 784
DseDI GACNNNNNNGTC 1 cut(s) 784
Eam1104I CTCTTC 5 cut(s) 3, 93, 379, 588, 924
EarI CTCTTC 5 cut(s) 3, 93, 379, 588, 924
EciI GGCGGA 1 cut(s) 828
Ecl136II GAGCTC 1 cut(s) 746
Eco130I CCWWGG 3 cut(s) 768, 1460, 1540
Eco24I GRGCYC 1 cut(s) 748
Eco31I GGTCTC 3 cut(s) 468, 921, 1351
Eco32I GATATC 1 cut(s) 1404
Eco47I GGWCC 3 cut(s) 473, 1456, 1496
Eco53kI GAGCTC 1 cut(s) 746
Eco57I CTGAAG 3 cut(s) 453, 612, 894
Eco88I CYCGRG 2 cut(s) 1291, 1361
EcoICRI GAGCTC 1 cut(s) 746
EcoO109I RGGNCCY 2 cut(s) 473, 1456
EcoRI GAATTC 3 cut(s) 67, 501, 1037
EcoRV GATATC 1 cut(s) 1404
EcoT14I CCWWGG 3 cut(s) 768, 1460, 1540
EcoT38I GRGCYC 1 cut(s) 748
ErhI CCWWGG 3 cut(s) 768, 1460, 1540
FaeI CATG 6 cut(s) 647, 671, 1096, 1160, 1237, 1315
FalI AAGNNNNNCTT 4 cut(s) 608, 640, 765, 797
FatI CATG 6 cut(s) 643, 667, 1092, 1156, 1233, 1311
FauNDI CATATG 1 cut(s) 1225
FblI GTMKAC 1 cut(s) 1176
Fnu4HI GCNGC 7 cut(s) 234, 1251, 1525, 1528, 1531, 1534, 1537
FokI GGATG 7 cut(s) 17, 363, 549, 747, 786, 979, 1138
FriOI GRGCYC 1 cut(s) 748
Fsp4HI GCNGC 7 cut(s) 234, 1251, 1525, 1528, 1531, 1534, 1537
FspBI CTAG 1 cut(s) 960
GluI GCNGC 7 cut(s) 234, 1251, 1525, 1528, 1531, 1534, 1537
GsuI CTGGAG 1 cut(s) 1233
HaeIII GGCC 3 cut(s) 1169, 1282, 1539
HapII CCGG 4 cut(s) 275, 658, 1110, 1292
HgaI GACGC 1 cut(s) 996
Hin1II CATG 6 cut(s) 647, 671, 1096, 1160, 1237, 1315
HindIII AAGCTT 5 cut(s) 545, 585, 701, 932, 1490
HinfI GANTC 5 cut(s) 254, 392, 1188, 1237, 1429
HpaII CCGG 4 cut(s) 275, 658, 1110, 1292
Hpy166II GTNNAC 3 cut(s) 765, 1177, 1504
Hpy188III TCNNGA 8 cut(s) 120, 326, 506, 517, 789, 984, 1001, 1486
Hpy8I GTNNAC 3 cut(s) 765, 1177, 1504
Hpy99I CGWCG 4 cut(s) 160, 163, 990, 1034
HpyAV CCTTC 5 cut(s) 315, 477, 520, 869, 1412
HpyCH4III ACNGT 5 cut(s) 52, 712, 762, 1088, 1395
HpyCH4IV ACGT 2 cut(s) 1162, 1414
HpyCH4V TGCA 2 cut(s) 898, 1346
HpyF10VI GCNNNNNNNGC 9 cut(s) 584, 1071, 1256, 1316, 1524, 1530, 1533, 1536, 1545
HpyF3I CTNAG 9 cut(s) 36, 138, 180, 312, 351, 414, 543, 906, 1549
HpySE526I ACGT 2 cut(s) 1162, 1414
Hsp92II CATG 6 cut(s) 647, 671, 1096, 1160, 1237, 1315
KroI GCCGGC 1 cut(s) 657
KroNI GCCGGC 1 cut(s) 659
LmnI GCTCC 3 cut(s) 743, 824, 1214
Lsp1109I GCAGC 6 cut(s) 220, 1237, 1536, 1539, 1542, 1545
LweI GCATC 2 cut(s) 173, 725
MaeI CTAG 1 cut(s) 960
MaeII ACGT 2 cut(s) 1162, 1414
MaeIII GTNAC 4 cut(s) 194, 277, 775, 1088
MflI RGATCY 9 cut(s) 175, 293, 484, 835, 878, 887, 1003, 1446, 1482
MhlI GDGCHC 1 cut(s) 748
MluCI AATT 5 cut(s) 67, 501, 993, 1037, 1568
MlyI GAGTC 1 cut(s) 1182
MmeI TCCRAC 1 cut(s) 802
MroNI GCCGGC 1 cut(s) 657
MroXI GAANNNNTTC 1 cut(s) 975
MseI TTAA 6 cut(s) 125, 336, 453, 633, 884, 1008
MslI CAYNNNNRTG 2 cut(s) 804, 1120
MspA1I CMGCKG 1 cut(s) 1536
MspCI CTTAAG 2 cut(s) 632, 1007
MspI CCGG 4 cut(s) 275, 658, 1110, 1292
MspR9I CCNGG 4 cut(s) 275, 1110, 1292, 1293
MwoI GCNNNNNNNGC 9 cut(s) 584, 1071, 1256, 1316, 1524, 1530, 1533, 1536, 1545
NaeI GCCGGC 1 cut(s) 659
NciI CCSGG 4 cut(s) 275, 1110, 1292, 1293
NdeI CATATG 1 cut(s) 1225
NgoMIV GCCGGC 1 cut(s) 657
NlaIII CATG 6 cut(s) 647, 671, 1096, 1160, 1237, 1315
NlaIV GGNNCC 5 cut(s) 177, 1131, 1424, 1458, 1484
NmuCI GTSAC 2 cut(s) 775, 1088
NspI RCATGY 1 cut(s) 1096
PciI ACATGT 1 cut(s) 1092
PdiI GCCGGC 1 cut(s) 659
PdmI GAANNNNTTC 1 cut(s) 975
PfeI GAWTC 4 cut(s) 254, 392, 1237, 1429
PkrI GCNGC 7 cut(s) 235, 1252, 1526, 1529, 1532, 1535, 1538
PleI GAGTC 1 cut(s) 1182
PpsI GAGTC 1 cut(s) 1182
PpuMI RGGWCCY 2 cut(s) 473, 1456
PscI ACATGT 1 cut(s) 1092
PsiI TTATAA 1 cut(s) 812
Psp124BI GAGCTC 1 cut(s) 748
Psp5II RGGWCCY 2 cut(s) 473, 1456
PspN4I GGNNCC 5 cut(s) 177, 1131, 1424, 1458, 1484
PspPI GGNCC 3 cut(s) 473, 1456, 1496
PspPPI RGGWCCY 2 cut(s) 473, 1456
PsuI RGATCY 9 cut(s) 175, 293, 484, 835, 878, 887, 1003, 1446, 1482
RsaI GTAC 4 cut(s) 714, 830, 1085, 1266
RsaNI GTAC 4 cut(s) 713, 829, 1084, 1265
RseI CAYNNNNRTG 2 cut(s) 804, 1120
SacI GAGCTC 1 cut(s) 748
SaqAI TTAA 6 cut(s) 125, 336, 453, 633, 884, 1008
SatI GCNGC 7 cut(s) 234, 1251, 1525, 1528, 1531, 1534, 1537
Sau96I GGNCC 3 cut(s) 473, 1456, 1496
ScaI AGTACT 1 cut(s) 1085
SchI GAGTC 1 cut(s) 1182
ScrFI CCNGG 4 cut(s) 275, 1110, 1292, 1293
SduI GDGCHC 1 cut(s) 748
SfaNI GCATC 2 cut(s) 173, 725
SfcI CTRYAG 1 cut(s) 948
SinI GGWCC 3 cut(s) 473, 1456, 1496
SmaI CCCGGG 1 cut(s) 1293
SmiMI CAYNNNNRTG 2 cut(s) 804, 1120
SmlI CTYRAG 2 cut(s) 632, 1007
SmoI CTYRAG 2 cut(s) 632, 1007
Sse9I AATT 5 cut(s) 67, 501, 993, 1037, 1568
SsiI CCGC 4 cut(s) 460, 839, 1518, 1536
SspMI CTAG 1 cut(s) 960
SstI GAGCTC 1 cut(s) 748
StyD4I CCNGG 4 cut(s) 273, 1108, 1290, 1291
StyI CCWWGG 3 cut(s) 768, 1460, 1540
TaaI ACNGT 5 cut(s) 52, 712, 762, 1088, 1395
TaiI ACGT 2 cut(s) 1165, 1417
TaqI TCGA 5 cut(s) 191, 221, 790, 1029, 1439
TasI AATT 5 cut(s) 67, 501, 993, 1037, 1568
TatI WGTACW 1 cut(s) 1083
TauI GCSGC 1 cut(s) 1539
TfiI GAWTC 4 cut(s) 254, 392, 1237, 1429
Tru1I TTAA 6 cut(s) 125, 336, 453, 633, 884, 1008
Tru9I TTAA 6 cut(s) 125, 336, 453, 633, 884, 1008
TscAI CASTG 5 cut(s) 538, 715, 1337, 1413, 1484
TseFI GTSAC 2 cut(s) 775, 1088
TseI GCWGC 6 cut(s) 233, 1250, 1524, 1527, 1530, 1533
Tsp45I GTSAC 2 cut(s) 775, 1088
TspDTI ATGAA 6 cut(s) 21, 422, 693, 986, 1250, 1328
TspGWI ACGGA 2 cut(s) 590, 1162
TspMI CCCGGG 1 cut(s) 1291
TspRI CASTG 5 cut(s) 538, 715, 1337, 1413, 1484
Vha464I CTTAAG 2 cut(s) 632, 1007
VpaK11BI GGWCC 3 cut(s) 473, 1456, 1496
XapI RAATTY 4 cut(s) 67, 501, 1037, 1568
XceI RCATGY 1 cut(s) 1096
XmaI CCCGGG 1 cut(s) 1291
XmiI GTMKAC 1 cut(s) 1176
XmnI GAANNNNTTC 1 cut(s) 975
XspI CTAG 1 cut(s) 960
ZrmI AGTACT 1 cut(s) 1085
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.