belongs to the protein kinase superfamily
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G46290 AT5G59700 |
| fragaria_vesca | FvH4_3g34580 |
| malus_domestica | MD03G1103600.v1.1 MD11G1117300.v1.1 |
| prunus_persica | Prupe.6G087700_v2.0.a1 Prupe.6G087700_v2.0.a1 Prupe.6G087900_v2.0.a1 |
| pyrus_communis | pycom03g08440 pycom11g09850 |
| rosa_chinensis | RchiOBHm_Chr5g0062291 |
| rosa_laevigata | RLG00000035547 |
| rosa_multiflora | Rmu_ssc0000409.1_g000029 |
| rosa_roxburghii | Rroxscaffold_1G00018430 Rroxscaffold_1G00018440 |
| rosa_rugosa | Rorug05G0347400 |
| rosa_samantha | Rh5AG408100 Rh5BG421900 Rh5CG445900 Rh5DG436900 |
| rosa_wichuraiana | Rw5G038460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2216 |
| AatII | GACGTC | 1 cut(s) | 1821 |
| AccI | GTMKAC | 1 cut(s) | 945 |
| AccII | CGCG | 6 cut(s) | 500, 631, 1016, 1796, 1925, 2036 |
| AciI | CCGC | 9 cut(s) | 198, 624, 629, 812, 1827, 1923, 1925, 2084, 2146 |
| AclWI | GGATC | 7 cut(s) | 115, 453, 536, 1042, 1765, 1946, 2291 |
| AcsI | RAATTY | 5 cut(s) | 217, 353, 663, 805, 1407 |
| AcuI | CTGAAG | 2 cut(s) | 351, 1948 |
| AcyI | GRCGYC | 1 cut(s) | 1818 |
| AfaI | GTAC | 9 cut(s) | 78, 266, 326, 790, 875, 1283, 1490, 1513, 1921 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 2234 |
| AflIII | ACRYGT | 1 cut(s) | 376 |
| AgeI | ACCGGT | 1 cut(s) | 1787 |
| AhlI | ACTAGT | 1 cut(s) | 131 |
| AjnI | CCWGG | 2 cut(s) | 562, 745 |
| AleI | CACNNNNGTG | 1 cut(s) | 1788 |
| Alw21I | GWGCWC | 2 cut(s) | 459, 983 |
| Alw26I | GTCTC | 9 cut(s) | 308, 349, 593, 758, 1293, 1551, 1809, 2032, 2355 |
| AlwI | GGATC | 7 cut(s) | 115, 453, 536, 1042, 1765, 1946, 2291 |
| Ama87I | CYCGRG | 3 cut(s) | 472, 503, 862 |
| AoxI | GGCC | 2 cut(s) | 286, 1431 |
| ApeKI | GCWGC | 2 cut(s) | 2269, 2464 |
| ApoI | RAATTY | 5 cut(s) | 217, 353, 663, 805, 1407 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1529, 1561 |
| AsiGI | ACCGGT | 1 cut(s) | 1787 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1351 |
| AspLEI | GCGC | 2 cut(s) | 502, 2036 |
| AspS9I | GGNCC | 2 cut(s) | 626, 1892 |
| AsuC2I | CCSGG | 2 cut(s) | 863, 864 |
| AvaI | CYCGRG | 3 cut(s) | 472, 503, 862 |
| AvaII | GGWCC | 2 cut(s) | 626, 1892 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1503, 1536 |
| BanII | GRGCYC | 2 cut(s) | 459, 983 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 317, 349 |
| BauI | CACGAG | 1 cut(s) | 2365 |
| BbsI | GAAGAC | 3 cut(s) | 1706, 1975, 2310 |
| Bbv12I | GWGCWC | 2 cut(s) | 459, 983 |
| BbvI | GCAGC | 2 cut(s) | 2281, 2476 |
| BccI | CCATC | 4 cut(s) | 1012, 1301, 2236, 2285 |
| BceAI | ACGGC | 2 cut(s) | 252, 273 |
| BciT130I | CCWGG | 2 cut(s) | 564, 747 |
| BciVI | GTATCC | 2 cut(s) | 65, 1622 |
| BclI | TGATCA | 2 cut(s) | 1218, 2469 |
| BcnI | CCSGG | 2 cut(s) | 863, 864 |
| BcoDI | GTCTC | 9 cut(s) | 308, 349, 593, 758, 1293, 1551, 1809, 2032, 2355 |
| BcuI | ACTAGT | 1 cut(s) | 131 |
| BfaI | CTAG | 9 cut(s) | 132, 282, 642, 689, 704, 774, 825, 2064, 2081 |
| BfmI | CTRYAG | 2 cut(s) | 756, 2382 |
| BfuI | GTATCC | 2 cut(s) | 65, 1622 |
| BisI | GCNGC | 3 cut(s) | 198, 2270, 2465 |
| BlsI | GCNGC | 3 cut(s) | 199, 2271, 2466 |
| BmcAI | AGTACT | 1 cut(s) | 875 |
| Bme1390I | CCNGG | 4 cut(s) | 564, 747, 863, 864 |
| Bme18I | GGWCC | 2 cut(s) | 626, 1892 |
| BmeT110I | CYCGRG | 3 cut(s) | 472, 503, 862 |
| BmgT120I | GGNCC | 2 cut(s) | 626, 1892 |
| BmiI | GGNNCC | 2 cut(s) | 519, 672 |
| BmrFI | CCNGG | 4 cut(s) | 564, 747, 863, 864 |
| BmrI | ACTGGG | 1 cut(s) | 1173 |
| BmsI | GCATC | 2 cut(s) | 737, 1077 |
| BmuI | ACTGGG | 1 cut(s) | 1173 |
| BpiI | GAAGAC | 3 cut(s) | 1706, 1975, 2310 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 898, 930 |
| BpmI | CTGGAG | 1 cut(s) | 473 |
| BpuEI | CTTGAG | 3 cut(s) | 617, 1744, 1763 |
| BpuMI | CCSGG | 2 cut(s) | 863, 864 |
| Bsa29I | ATCGAT | 2 cut(s) | 41, 1902 |
| BsaAI | YACGTR | 1 cut(s) | 76 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1452, 2295 |
| BsaHI | GRCGYC | 1 cut(s) | 1818 |
| BsaI | GGTCTC | 3 cut(s) | 349, 1293, 2032 |
| BsaJI | CCNNGG | 5 cut(s) | 471, 563, 862, 1923, 2356 |
| BsaWI | WCCGGW | 4 cut(s) | 251, 1787, 1889, 1894 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 257, 287, 446, 451, 476, 481 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 2234 |
| Bse118I | RCCGGY | 1 cut(s) | 1787 |
| Bse1I | ACTGG | 5 cut(s) | 80, 201, 299, 1179, 1398 |
| Bse3DI | GCAATG | 2 cut(s) | 1241, 2100 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1452, 2295 |
| BseBI | CCWGG | 2 cut(s) | 564, 747 |
| BseCI | ATCGAT | 2 cut(s) | 41, 1902 |
| BseDI | CCNNGG | 5 cut(s) | 471, 563, 862, 1923, 2356 |
| BseGI | GGATG | 3 cut(s) | 961, 1337, 1355 |
| BseJI | GATNNNNATC | 2 cut(s) | 1452, 2295 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 2234 |
| BseMI | GCAATG | 2 cut(s) | 1241, 2100 |
| BseMII | CTCAG | 6 cut(s) | 360, 672, 968, 1171, 1562, 2469 |
| BseNI | ACTGG | 5 cut(s) | 80, 201, 299, 1179, 1398 |
| BseRI | GAGGAG | 1 cut(s) | 776 |
| BseXI | GCAGC | 2 cut(s) | 2281, 2476 |
| Bsh1236I | CGCG | 6 cut(s) | 500, 631, 1016, 1796, 1925, 2036 |
| Bsh1285I | CGRYCG | 3 cut(s) | 1075, 1079, 1236 |
| BshFI | GGCC | 2 cut(s) | 288, 1433 |
| BshTI | ACCGGT | 1 cut(s) | 1787 |
| BshVI | ATCGAT | 2 cut(s) | 41, 1902 |
| BsiEI | CGRYCG | 3 cut(s) | 1075, 1079, 1236 |
| BsiHKAI | GWGCWC | 2 cut(s) | 459, 983 |
| BsiHKCI | CYCGRG | 3 cut(s) | 472, 503, 862 |
| BsiSI | CCGG | 5 cut(s) | 252, 863, 1788, 1890, 1895 |
| BslFI | GGGAC | 1 cut(s) | 2409 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 2234 |
| BsmAI | GTCTC | 9 cut(s) | 308, 349, 593, 758, 1293, 1551, 1809, 2032, 2355 |
| BsmBI | CGTCTC | 3 cut(s) | 308, 593, 1809 |
| BsmFI | GGGAC | 1 cut(s) | 2409 |
| BsnI | GGCC | 2 cut(s) | 288, 1433 |
| Bso31I | GGTCTC | 3 cut(s) | 349, 1293, 2032 |
| BsoBI | CYCGRG | 3 cut(s) | 472, 503, 862 |
| Bsp1286I | GDGCHC | 2 cut(s) | 459, 983 |
| Bsp1407I | TGTACA | 2 cut(s) | 1281, 1488 |
| Bsp19I | CCATGG | 1 cut(s) | 2356 |
| BspACI | CCGC | 9 cut(s) | 198, 624, 629, 812, 1827, 1923, 1925, 2084, 2146 |
| BspANI | GGCC | 2 cut(s) | 288, 1433 |
| BspCNI | CTCAG | 6 cut(s) | 359, 673, 969, 1170, 1561, 2470 |
| BspDI | ATCGAT | 2 cut(s) | 41, 1902 |
| BspFNI | CGCG | 6 cut(s) | 500, 631, 1016, 1796, 1925, 2036 |
| BspHI | TCATGA | 1 cut(s) | 1128 |
| BspLI | GGNNCC | 2 cut(s) | 519, 672 |
| BspPI | GGATC | 7 cut(s) | 115, 453, 536, 1042, 1765, 1946, 2291 |
| BspTNI | GGTCTC | 3 cut(s) | 349, 1293, 2032 |
| BsrDI | GCAATG | 2 cut(s) | 1241, 2100 |
| BsrFI | RCCGGY | 1 cut(s) | 1787 |
| BsrGI | TGTACA | 2 cut(s) | 1281, 1488 |
| BsrI | ACTGG | 5 cut(s) | 80, 201, 299, 1179, 1398 |
| BssAI | RCCGGY | 1 cut(s) | 1787 |
| BssECI | CCNNGG | 5 cut(s) | 471, 563, 862, 1923, 2356 |
| BssNI | GRCGYC | 1 cut(s) | 1818 |
| BssSI | CACGAG | 1 cut(s) | 2365 |
| BssT1I | CCWWGG | 1 cut(s) | 2356 |
| Bst2BI | CACGAG | 1 cut(s) | 2365 |
| Bst2UI | CCWGG | 2 cut(s) | 564, 747 |
| Bst6I | CTCTTC | 1 cut(s) | 1685 |
| BstACI | GRCGYC | 1 cut(s) | 1818 |
| BstAUI | TGTACA | 2 cut(s) | 1281, 1488 |
| BstBAI | YACGTR | 1 cut(s) | 76 |
| BstC8I | GCNNGC | 3 cut(s) | 556, 591, 1248 |
| BstDSI | CCRYGG | 2 cut(s) | 1923, 2356 |
| BstF5I | GGATG | 3 cut(s) | 961, 1337, 1355 |
| BstFNI | CGCG | 6 cut(s) | 500, 631, 1016, 1796, 1925, 2036 |
| BstHHI | GCGC | 2 cut(s) | 502, 2036 |
| BstMAI | GTCTC | 9 cut(s) | 308, 349, 593, 758, 1293, 1551, 1809, 2032, 2355 |
| BstMCI | CGRYCG | 3 cut(s) | 1075, 1079, 1236 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 637, 1385, 1865, 2090 |
| BstNI | CCWGG | 2 cut(s) | 564, 747 |
| BstNSI | RCATGY | 1 cut(s) | 380 |
| BstSCI | CCNGG | 4 cut(s) | 562, 745, 861, 862 |
| BstSFI | CTRYAG | 2 cut(s) | 756, 2382 |
| BstSNI | TACGTA | 1 cut(s) | 76 |
| BstUI | CGCG | 6 cut(s) | 500, 631, 1016, 1796, 1925, 2036 |
| BstV1I | GCAGC | 2 cut(s) | 2281, 2476 |
| BstV2I | GAAGAC | 3 cut(s) | 1706, 1975, 2310 |
| Bsu15I | ATCGAT | 2 cut(s) | 41, 1902 |
| BsuI | GTATCC | 2 cut(s) | 65, 1622 |
| BsuRI | GGCC | 2 cut(s) | 288, 1433 |
| BsuTUI | ATCGAT | 2 cut(s) | 41, 1902 |
| BtgI | CCRYGG | 2 cut(s) | 1923, 2356 |
| BtgZI | GCGATG | 2 cut(s) | 1031, 1589 |
| BtsCI | GGATG | 3 cut(s) | 961, 1337, 1355 |
| BtsI | GCAGTG | 1 cut(s) | 2141 |
| BtsIMutI | CAGTG | 7 cut(s) | 87, 123, 292, 396, 541, 1186, 2141 |
| Cac8I | GCNNGC | 3 cut(s) | 556, 591, 1248 |
| CciI | TCATGA | 1 cut(s) | 1128 |
| CfoI | GCGC | 2 cut(s) | 502, 2036 |
| Cfr10I | RCCGGY | 1 cut(s) | 1787 |
| Cfr13I | GGNCC | 2 cut(s) | 626, 1892 |
| Cfr42I | CCGCGG | 1 cut(s) | 1926 |
| Cfr9I | CCCGGG | 1 cut(s) | 862 |
| ClaI | ATCGAT | 2 cut(s) | 41, 1902 |
| CpoI | CGGWCCG | 2 cut(s) | 626, 1892 |
| CseI | GACGC | 1 cut(s) | 1802 |
| Csp6I | GTAC | 9 cut(s) | 77, 265, 325, 789, 874, 1282, 1489, 1512, 1920 |
| CspAI | ACCGGT | 1 cut(s) | 1787 |
| CspI | CGGWCCG | 2 cut(s) | 626, 1892 |
| CviAII | CATG | 9 cut(s) | 377, 585, 619, 1129, 1855, 1913, 2317, 2357, 2446 |
| CviQI | GTAC | 9 cut(s) | 77, 265, 325, 789, 874, 1282, 1489, 1512, 1920 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2216 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2216 |
| Eam1104I | CTCTTC | 1 cut(s) | 1685 |
| EarI | CTCTTC | 1 cut(s) | 1685 |
| EciI | GGCGGA | 1 cut(s) | 1816 |
| Ecl136II | GAGCTC | 2 cut(s) | 457, 981 |
| Eco105I | TACGTA | 1 cut(s) | 76 |
| Eco130I | CCWWGG | 1 cut(s) | 2356 |
| Eco24I | GRGCYC | 2 cut(s) | 459, 983 |
| Eco31I | GGTCTC | 3 cut(s) | 349, 1293, 2032 |
| Eco32I | GATATC | 2 cut(s) | 901, 1946 |
| Eco47I | GGWCC | 2 cut(s) | 626, 1892 |
| Eco53kI | GAGCTC | 2 cut(s) | 457, 981 |
| Eco57I | CTGAAG | 2 cut(s) | 351, 1948 |
| Eco88I | CYCGRG | 3 cut(s) | 472, 503, 862 |
| EcoICRI | GAGCTC | 2 cut(s) | 457, 981 |
| EcoRI | GAATTC | 2 cut(s) | 805, 1407 |
| EcoRII | CCWGG | 2 cut(s) | 562, 745 |
| EcoRV | GATATC | 2 cut(s) | 901, 1946 |
| EcoT14I | CCWWGG | 1 cut(s) | 2356 |
| EcoT22I | ATGCAT | 1 cut(s) | 1754 |
| EcoT38I | GRGCYC | 2 cut(s) | 459, 983 |
| ErhI | CCWWGG | 1 cut(s) | 2356 |
| Esp3I | CGTCTC | 3 cut(s) | 308, 593, 1809 |
| FaeI | CATG | 9 cut(s) | 380, 588, 622, 1132, 1858, 1916, 2320, 2360, 2449 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1372, 1404, 1485, 1517, 2103, 2135 |
| FaqI | GGGAC | 1 cut(s) | 2409 |
| FatI | CATG | 9 cut(s) | 376, 584, 618, 1128, 1854, 1912, 2316, 2356, 2445 |
| FauI | CCCGC | 1 cut(s) | 2139 |
| FbaI | TGATCA | 2 cut(s) | 1218, 2469 |
| FblI | GTMKAC | 1 cut(s) | 945 |
| Fnu4HI | GCNGC | 3 cut(s) | 198, 2270, 2465 |
| FokI | GGATG | 3 cut(s) | 968, 1324, 1342 |
| FriOI | GRGCYC | 2 cut(s) | 459, 983 |
| Fsp4HI | GCNGC | 3 cut(s) | 198, 2270, 2465 |
| FspBI | CTAG | 9 cut(s) | 132, 282, 642, 689, 704, 774, 825, 2064, 2081 |
| GlaI | GCGC | 2 cut(s) | 501, 2035 |
| GluI | GCNGC | 3 cut(s) | 198, 2270, 2465 |
| GsuI | CTGGAG | 1 cut(s) | 473 |
| HaeIII | GGCC | 2 cut(s) | 288, 1433 |
| HapII | CCGG | 5 cut(s) | 252, 863, 1788, 1890, 1895 |
| HgaI | GACGC | 1 cut(s) | 1802 |
| HhaI | GCGC | 2 cut(s) | 502, 2036 |
| Hin1I | GRCGYC | 1 cut(s) | 1818 |
| Hin1II | CATG | 9 cut(s) | 380, 588, 622, 1132, 1858, 1916, 2320, 2360, 2449 |
| Hin6I | GCGC | 2 cut(s) | 500, 2034 |
| HinP1I | GCGC | 2 cut(s) | 500, 2034 |
| HincII | GTYRAC | 3 cut(s) | 859, 946, 2374 |
| HindII | GTYRAC | 3 cut(s) | 859, 946, 2374 |
| HpaI | GTTAAC | 1 cut(s) | 2374 |
| HpaII | CCGG | 5 cut(s) | 252, 863, 1788, 1890, 1895 |
| Hpy166II | GTNNAC | 9 cut(s) | 465, 616, 859, 946, 1087, 1489, 1663, 1999, 2374 |
| Hpy8I | GTNNAC | 9 cut(s) | 465, 616, 859, 946, 1087, 1489, 1663, 1999, 2374 |
| Hpy99I | CGWCG | 2 cut(s) | 1511, 1640 |
| HpyAV | CCTTC | 2 cut(s) | 412, 555 |
| HpyCH4IV | ACGT | 7 cut(s) | 75, 120, 461, 527, 1738, 1818, 2485 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 637, 1385, 1865, 2090 |
| HpySE526I | ACGT | 7 cut(s) | 75, 120, 461, 527, 1738, 1818, 2485 |
| Hsp92I | GRCGYC | 1 cut(s) | 1818 |
| Hsp92II | CATG | 9 cut(s) | 380, 588, 622, 1132, 1858, 1916, 2320, 2360, 2449 |
| HspAI | GCGC | 2 cut(s) | 500, 2034 |
| Ksp22I | TGATCA | 2 cut(s) | 1218, 2469 |
| KspAI | GTTAAC | 1 cut(s) | 2374 |
| KspI | CCGCGG | 1 cut(s) | 1926 |
| LmnI | GCTCC | 3 cut(s) | 454, 670, 775 |
| Lsp1109I | GCAGC | 2 cut(s) | 2281, 2476 |
| LweI | GCATC | 2 cut(s) | 737, 1077 |
| MaeI | CTAG | 9 cut(s) | 132, 282, 642, 689, 704, 774, 825, 2064, 2081 |
| MaeII | ACGT | 7 cut(s) | 75, 120, 461, 527, 1738, 1818, 2485 |
| MfeI | CAATTG | 1 cut(s) | 1461 |
| MhlI | GDGCHC | 2 cut(s) | 459, 983 |
| MlyI | GAGTC | 5 cut(s) | 941, 1702, 1903, 2159, 2226 |
| MmeI | TCCRAC | 2 cut(s) | 1017, 1709 |
| Mph1103I | ATGCAT | 1 cut(s) | 1754 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1351 |
| MseI | TTAA | 7 cut(s) | 53, 708, 1229, 1425, 1527, 2373, 2488 |
| MslI | CAYNNNNRTG | 4 cut(s) | 800, 1133, 1788, 2315 |
| MspA1I | CMGCKG | 2 cut(s) | 1925, 2467 |
| MspI | CCGG | 5 cut(s) | 252, 863, 1788, 1890, 1895 |
| MspR9I | CCNGG | 4 cut(s) | 564, 747, 863, 864 |
| MunI | CAATTG | 1 cut(s) | 1461 |
| MvaI | CCWGG | 2 cut(s) | 564, 747 |
| MvnI | CGCG | 6 cut(s) | 500, 631, 1016, 1796, 1925, 2036 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 637, 1385, 1865, 2090 |
| NciI | CCSGG | 2 cut(s) | 863, 864 |
| NcoI | CCATGG | 1 cut(s) | 2356 |
| NlaIII | CATG | 9 cut(s) | 380, 588, 622, 1132, 1858, 1916, 2320, 2360, 2449 |
| NlaIV | GGNNCC | 2 cut(s) | 519, 672 |
| NmuCI | GTSAC | 9 cut(s) | 121, 127, 290, 838, 1027, 1590, 1694, 1790, 2139 |
| NsiI | ATGCAT | 1 cut(s) | 1754 |
| NspI | RCATGY | 1 cut(s) | 380 |
| OliI | CACNNNNGTG | 1 cut(s) | 1788 |
| PaeR7I | CTCGAG | 1 cut(s) | 503 |
| PagI | TCATGA | 1 cut(s) | 1128 |
| PciI | ACATGT | 1 cut(s) | 376 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 1632, 1644, 1800 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1351 |
| PinAI | ACCGGT | 1 cut(s) | 1787 |
| PkrI | GCNGC | 3 cut(s) | 199, 2271, 2466 |
| Ple19I | CGATCG | 2 cut(s) | 1079, 1236 |
| PleI | GAGTC | 5 cut(s) | 941, 1701, 1903, 2159, 2225 |
| PpsI | GAGTC | 5 cut(s) | 941, 1701, 1903, 2159, 2225 |
| Ppu21I | YACGTR | 1 cut(s) | 76 |
| PscI | ACATGT | 1 cut(s) | 376 |
| Psp124BI | GAGCTC | 2 cut(s) | 459, 983 |
| Psp6I | CCWGG | 2 cut(s) | 562, 745 |
| PspGI | CCWGG | 2 cut(s) | 562, 745 |
| PspN4I | GGNNCC | 2 cut(s) | 519, 672 |
| PspPI | GGNCC | 2 cut(s) | 626, 1892 |
| PspXI | VCTCGAGB | 1 cut(s) | 503 |
| PvuI | CGATCG | 2 cut(s) | 1079, 1236 |
| PvuII | CAGCTG | 1 cut(s) | 2467 |
| RsaI | GTAC | 9 cut(s) | 78, 266, 326, 790, 875, 1283, 1490, 1513, 1921 |
| RsaNI | GTAC | 9 cut(s) | 77, 265, 325, 789, 874, 1282, 1489, 1512, 1920 |
| RseI | CAYNNNNRTG | 4 cut(s) | 800, 1133, 1788, 2315 |
| Rsr2I | CGGWCCG | 2 cut(s) | 626, 1892 |
| RsrII | CGGWCCG | 2 cut(s) | 626, 1892 |
| SacI | GAGCTC | 2 cut(s) | 459, 983 |
| SacII | CCGCGG | 1 cut(s) | 1926 |
| SalI | GTCGAC | 1 cut(s) | 944 |
| SaqAI | TTAA | 7 cut(s) | 53, 708, 1229, 1425, 1527, 2373, 2488 |
| SatI | GCNGC | 3 cut(s) | 198, 2270, 2465 |
| Sau96I | GGNCC | 2 cut(s) | 626, 1892 |
| ScaI | AGTACT | 1 cut(s) | 875 |
| SchI | GAGTC | 5 cut(s) | 941, 1702, 1903, 2159, 2226 |
| ScrFI | CCNGG | 4 cut(s) | 564, 747, 863, 864 |
| SduI | GDGCHC | 2 cut(s) | 459, 983 |
| SfaNI | GCATC | 2 cut(s) | 737, 1077 |
| SfcI | CTRYAG | 2 cut(s) | 756, 2382 |
| Sfr274I | CTCGAG | 1 cut(s) | 503 |
| Sfr303I | CCGCGG | 1 cut(s) | 1926 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1787 |
| SgrBI | CCGCGG | 1 cut(s) | 1926 |
| SinI | GGWCC | 2 cut(s) | 626, 1892 |
| SlaI | CTCGAG | 1 cut(s) | 503 |
| SmaI | CCCGGG | 1 cut(s) | 864 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 800, 1133, 1788, 2315 |
| SmlI | CTYRAG | 4 cut(s) | 503, 596, 1723, 1742 |
| SmoI | CTYRAG | 4 cut(s) | 503, 596, 1723, 1742 |
| SnaBI | TACGTA | 1 cut(s) | 76 |
| SpeI | ACTAGT | 1 cut(s) | 131 |
| SsiI | CCGC | 9 cut(s) | 198, 624, 629, 812, 1827, 1923, 1925, 2084, 2146 |
| SspMI | CTAG | 9 cut(s) | 132, 282, 642, 689, 704, 774, 825, 2064, 2081 |
| SstI | GAGCTC | 2 cut(s) | 459, 983 |
| StyD4I | CCNGG | 4 cut(s) | 562, 745, 861, 862 |
| StyI | CCWWGG | 1 cut(s) | 2356 |
| TaiI | ACGT | 7 cut(s) | 78, 123, 464, 530, 1741, 1821, 2488 |
| TaqII | GACCGA | 1 cut(s) | 1061 |
| TatI | WGTACW | 4 cut(s) | 264, 873, 1281, 1488 |
| TauI | GCSGC | 1 cut(s) | 200 |
| Tru1I | TTAA | 7 cut(s) | 53, 708, 1229, 1425, 1527, 2373, 2488 |
| Tru9I | TTAA | 7 cut(s) | 53, 708, 1229, 1425, 1527, 2373, 2488 |
| TscAI | CASTG | 7 cut(s) | 87, 130, 299, 403, 541, 1186, 2148 |
| TseFI | GTSAC | 9 cut(s) | 121, 127, 290, 838, 1027, 1590, 1694, 1790, 2139 |
| TseI | GCWGC | 2 cut(s) | 2269, 2464 |
| Tsp45I | GTSAC | 9 cut(s) | 121, 127, 290, 838, 1027, 1590, 1694, 1790, 2139 |
| TspGWI | ACGGA | 6 cut(s) | 265, 458, 1049, 1106, 1131, 1589 |
| TspMI | CCCGGG | 1 cut(s) | 862 |
| TspRI | CASTG | 7 cut(s) | 87, 130, 299, 403, 541, 1186, 2148 |
| VpaK11BI | GGWCC | 2 cut(s) | 626, 1892 |
| XapI | RAATTY | 5 cut(s) | 217, 353, 663, 805, 1407 |
| XceI | RCATGY | 1 cut(s) | 380 |
| XhoI | CTCGAG | 1 cut(s) | 503 |
| XmaI | CCCGGG | 1 cut(s) | 862 |
| XmiI | GTMKAC | 1 cut(s) | 945 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1351 |
| XspI | CTAG | 9 cut(s) | 132, 282, 642, 689, 704, 774, 825, 2064, 2081 |
| ZraI | GACGTC | 1 cut(s) | 1819 |
| ZrmI | AGTACT | 1 cut(s) | 875 |
| Zsp2I | ATGCAT | 1 cut(s) | 1754 |