Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0009926

Physical Location & Seq

Genomic Coordinates Forward (+)

8235902 .. 8238403

Gene Structure 2502 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g09850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2502 bp

ATGATGATGGGTTGTTTTAAATTTGATCTGTTCATCTGGGTTTTTTCTGTATTGTGTTTGGGATTGTTGTGCAGTGGATTTGTTCCTGCTGACAATTACCTTATAGACTGTGGATCACTTGCCAATACTACAGTGGGTAACCGAGTTTTTCTAGCTGATAACTTGGCTTCCAAATATCTTTCATCCCCAAAAGGTGTTGTTGCCAATGTTTCTTTGAAATCAATCACTTCCTTTGATGATTCGCCGCTGTATCAGACAGCGCGAATCTTCCCAGAATCCTCCAAGTACACCTTTTCCATAAGCCAAAGCGGTAGGCATTGGATCCGCCTTTACTTCTATCCGTTTACTTTTGGTAGTTACGATTTGAGCAAGGCCAAATTCTCTGTTTCCGCCCAAAACTTTGCGCTCCTTACTGATTTCAATGTTCAAAACACTTCTCTCAAAGAATTTTCGGTGAATGTGACTTCAGATAGCCTTGTTATCACCTTCACCCCTTCCAGCAATTCTTTCGCATTCCTAAATGCGATAGAAGTTGTTTCAGTACCCGACCAACTCATAACTGAAGATGCCAGCACCGTGTCTGAGAAATTCCAGGGTTTGACGAATCAGGCTCTGGAAACAGCTTGGAGGGTCAATATGGGTGGACCAAGAGTGTCTTTCGAGAATGATACCCTGTGGCGAACTTGGGTTCCTGACCAAAGTTTTCTAGTAAATGAGAACCTTGCCCAAGATTTCTCGAACATTGCAGCTGTTACGTATGAGGCTGGTTTGGCAACTGCGGACATTGCTCCACAAACCGTCTATGGAACCCTCACTGAGATGAACTCAGCAAATAATCCCAACAGCAATTTCAATGTAACCTGGGAGTTCACGGTGGATCCAGGGTTCCAATACCTTGTTCGATTTCACTTTTGCGATGTAGTAAGTAAAGCTCTCAATCAGCTGTACTTCAATGTTTATGTTGACTCTTCCAATGTTGCTCCAGATCTCGATCTGAGTTCTGTAGCATTTAATAAGTTGGCTGTTCCATATTATCTGGACTTTGTTACAGCTTCCACTGTCAGAAATAAGCTGCGTATTAGTATTGGCCCCTCTGCTGAAAACAATGCTTATCCCAACGCCATTCTAAATGGGCTCGAGATTATGAAAATGAACAATTCAGCAGGCAGCCTCAGTGGAGCCAACTCAGTTTCTCCTTCGAATCCAGGTTCAAAAAGTAACGTTGGAGTAATTGTGGGTGCCAGCGTTGGGTCATTTATTGCAGTGGCATTGGCTGGGGTTCTCTTTGTTCTGTGCAGAAGAAGGAAGAGACTGGCAGACCAAGGCCATTCTAAGACTTGGATTCCCTTTTCCATGAACGGAACCAATTCTCATACCATGGGAAGTAAATACTCATATGGAACAACTGCTAGTGCTGCTTCTAACTACAGCTATCGTTTTCCTTTTGGGGTAGTACAGGAGGCTACGAGTAACTTTGATGAGAGCTGGGTTATTGGAATCGGTGGTTTTGGGAAGGTATACAAAGGAACCTTGAACGATGGAACCAAAGTGGCTGTCAAGAGGGGAAATCCAAGGTCTCAACAGGGACTTGCAGAGTTCAGGACTGAAATTGAGATGCTATCTCAATTCCGTCACCGCCACCTTGTCTCATTGATTGGGTATTGTGATGACAAGAATGAGATGATTCTGATATATGAATATATGGAGAACGGAACCCTGAAGGGTCATCTCTATGGCTCAGGTAACCCCAGCTTAAGTTGGAAACAAAGGCTTGAAGTATGCATTGGATCAGCTAGAGGACTTCACTACCTTCACACTGGTTATGCAAAAGCAGTTATTCATCGTGATGTGAAATCCGCAAACATCTTGCTTGATGAGAACCTCATGGCCAAGGTTGCTGATTTTGGGCTTTCTAAGACGGGGCCTGAAATTGATCAAACCCATGTCAGTACGGCGGTGAAAGGGAGTTTTGGATACCTTGATCCTGAATATTTTAGAAGGCAACAACTGACTGAGAAATCAGATGTGTATTCATTTGGGGTGGTTTTGTTTGAGGTTCTTTGTGCAAGACCTGTTATAGACCCGTCTCTTCAGAGGGAAATGGTGAACTTGGCTGAATGGGCAATGAAATGGCAGAAGAAGGGGCAGTTGGAGCAAATCATAGACTCAACTCTTGCAGGCAAAATCAGACCAGATTCTCTGAGGAAATTTGGAGAAACCGCCGAGAAATGCTTGGCCGACTATGGTGTTGACAGGCCCTCCATGGGAGATGTGTTGTGGAACCTAGAGTATGCCCTTCAACTTCAAGAAGCAGAGATTCCAGGCGACGCCGAAGAAAATAGTACCAATATGATTGGCGAGCTATCCCCACAAGTCAACAACTTCAATAACGTTGATACAAGCGACTCTGCTGCACAATTTGAAGTCTCGAGCGTGGATGATCTTTCAGGTGTTTCTATGAGTAAAGTGTTCTCACAGCTGGTGAAGTCCGAGGGTAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009506 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009826 GO:0009987 GO:0010033 GO:0014070 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0032502 GO:0032989 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0050896 GO:0055044 GO:0060560 GO:0071704 GO:0071840 GO:0071944 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

834

Amino Acids

91.8

Weight (kDa)

5.43

Isoelectric Point (pI)

30.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin	PF11721	33 - 157	2.8e-07	Malectin domain
Malectin_like	PF12819	35 - 383	6e-32	Malectin-like domain
PK_Tyr_Ser-Thr	PF07714	497 - 691	1.1e-47	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	497 - 755	4.5e-43	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009926)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46290 AT5G59700
fragaria_vesca	FvH4_3g34580
malus_domestica	MD03G1103600.v1.1 MD11G1117300.v1.1
prunus_persica	Prupe.6G087700_v2.0.a1 Prupe.6G087700_v2.0.a1 Prupe.6G087900_v2.0.a1
pyrus_communis	pycom03g08440 pycom11g09850
rosa_chinensis	RchiOBHm_Chr5g0062291
rosa_laevigata	RLG00000035547
rosa_multiflora	Rmu_ssc0000409.1_g000029
rosa_roxburghii	Rroxscaffold_1G00018430 Rroxscaffold_1G00018440
rosa_rugosa	Rorug05G0347400
rosa_samantha	Rh5AG408100 Rh5BG421900 Rh5CG445900 Rh5DG436900
rosa_wichuraiana	Rw5G038460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1238
AccI	GTMKAC	1 cut(s)	1518
AccII	CGCG	1 cut(s)	262
AciI	CCGC	9 cut(s)	245, 309, 325, 390, 779, 1636, 1857, 1955, 2220
AclI	AACGTT	2 cut(s)	1221, 2391
AclWI	GGATC	7 cut(s)	121, 316, 329, 872, 885, 1795, 1976
AcoI	YGGCCR	2 cut(s)	1887, 2235
AcsI	RAATTY	5 cut(s)	20, 377, 446, 587, 2207
AcuI	CTGAAG	4 cut(s)	450, 582, 1739, 2075
AcyI	GRCGYC	1 cut(s)	2328
AfaI	GTAC	6 cut(s)	287, 543, 947, 1455, 1951, 2344
AfiI	CCNNNNNNNGG	3 cut(s)	1248, 2264, 2496
AflII	CTTAAG	1 cut(s)	1753
AjnI	CCWGG	5 cut(s)	591, 860, 880, 1204, 2320
AjuI	GAANNNNNNNTTGG	8 cut(s)	833, 865, 882, 914, 1767, 1799, 2132, 2164
AloI	GAACNNNNNNTCC	4 cut(s)	673, 705, 869, 901
Alw26I	GTCTC	5 cut(s)	1303, 1581, 1651, 2091, 2431
AlwI	GGATC	7 cut(s)	121, 316, 329, 872, 885, 1795, 1976
AlwNI	CAGNNNCTG	1 cut(s)	613
Ama87I	CYCGRG	2 cut(s)	1136, 2428
AoxI	GGCC	7 cut(s)	372, 1087, 1324, 1887, 1922, 2235, 2255
ApeKI	GCWGC	5 cut(s)	746, 1072, 1167, 1415, 2411
ApoI	RAATTY	5 cut(s)	20, 377, 446, 587, 2207
ArsI	GACNNNNNNTTYG	2 cut(s)	1539, 1571
Asp700I	GAANNNNTTC	1 cut(s)	1366
AspLEI	GCGC	2 cut(s)	262, 406
AspS9I	GGNCC	4 cut(s)	644, 1088, 1922, 2256
AsuHPI	GGTGA	7 cut(s)	466, 475, 481, 1625, 1969, 2116, 2494
AsuII	TTCGAA	1 cut(s)	1199
AvaI	CYCGRG	2 cut(s)	1136, 2428
AvaII	GGWCC	1 cut(s)	644
BalI	TGGCCA	1 cut(s)	1889
BamHI	GGATCC	2 cut(s)	321, 877
BanI	GGYRCC	1 cut(s)	1238
BanII	GRGCYC	1 cut(s)	1137
BbvI	GCAGC	5 cut(s)	758, 1059, 1179, 1402, 2398
BccI	CCATC	1 cut(s)	1532
BceAI	ACGGC	1 cut(s)	1968
BcgI	CGANNNNNNTGC	4 cut(s)	490, 524, 2393, 2427
BciT130I	CCWGG	5 cut(s)	593, 862, 882, 1206, 2322
BciVI	GTATCC	1 cut(s)	1967
BclI	TGATCA	1 cut(s)	1933
BcoDI	GTCTC	5 cut(s)	1303, 1581, 1651, 2091, 2431
BfaI	CTAG	5 cut(s)	152, 707, 1410, 1794, 2285
BfmI	CTRYAG	3 cut(s)	129, 1002, 1426
BfrI	CTTAAG	1 cut(s)	1753
BfuI	GTATCC	1 cut(s)	1967
BglII	AGATCT	1 cut(s)	985
BisI	GCNGC	6 cut(s)	245, 747, 1073, 1168, 1416, 2412
BlsI	GCNGC	6 cut(s)	246, 748, 1074, 1169, 1417, 2413
Bme1390I	CCNGG	5 cut(s)	593, 862, 882, 1206, 2322
Bme18I	GGWCC	1 cut(s)	644
BmeT110I	CYCGRG	2 cut(s)	1136, 2428
BmgT120I	GGNCC	4 cut(s)	644, 1088, 1922, 2256
BmrFI	CCNGG	5 cut(s)	593, 862, 882, 1206, 2322
BmsI	GCATC	2 cut(s)	556, 1605
BplI	GAGNNNNNCTC	2 cut(s)	809, 841
BpmI	CTGGAG	1 cut(s)	966
Bpu10I	CCTNAGC	1 cut(s)	1738
Bpu14I	TTCGAA	1 cut(s)	1199
BsaAI	YACGTR	1 cut(s)	756
BsaBI	GATNNNNATC	1 cut(s)	990
BsaHI	GRCGYC	1 cut(s)	2328
BsaI	GGTCTC	1 cut(s)	1581
BsaJI	CCNNGG	9 cut(s)	592, 861, 881, 1321, 1377, 1571, 1890, 2262, 2490
BsaXI	ACNNNNNCTCC	4 cut(s)	1218, 1248, 2243, 2273
Bsc4I	CCNNNNNNNGG	3 cut(s)	1248, 2264, 2496
Bse1I	ACTGG	2 cut(s)	1317, 1822
Bse3DI	GCAATG	3 cut(s)	741, 783, 2130
Bse8I	GATNNNNATC	1 cut(s)	990
BseBI	CCWGG	5 cut(s)	593, 862, 882, 1206, 2322
BseDI	CCNNGG	9 cut(s)	592, 861, 881, 1321, 1377, 1571, 1890, 2262, 2490
BseGI	GGATG	2 cut(s)	182, 2443
BseJI	GATNNNNATC	1 cut(s)	990
BseLI	CCNNNNNNNGG	3 cut(s)	1248, 2264, 2496
BseMI	GCAATG	3 cut(s)	741, 783, 2130
BseMII	CTCAG	9 cut(s)	573, 807, 840, 986, 1186, 1200, 1752, 2004, 2192
BseNI	ACTGG	2 cut(s)	1317, 1822
BseXI	GCAGC	5 cut(s)	758, 1059, 1179, 1402, 2398
BseYI	CCCAGC	3 cut(s)	1274, 1485, 1748
BsgI	GTGCAG	3 cut(s)	91, 1315, 2397
Bsh1236I	CGCG	1 cut(s)	262
BshFI	GGCC	7 cut(s)	374, 1089, 1326, 1889, 1924, 2237, 2257
BshNI	GGYRCC	1 cut(s)	1238
BsiHKCI	CYCGRG	2 cut(s)	1136, 2428
BslFI	GGGAC	1 cut(s)	1599
BslI	CCNNNNNNNGG	3 cut(s)	1248, 2264, 2496
BsmAI	GTCTC	5 cut(s)	1303, 1581, 1651, 2091, 2431
BsmBI	CGTCTC	1 cut(s)	2091
BsmFI	GGGAC	1 cut(s)	1599
BsmI	GAATGC	1 cut(s)	512
BsnI	GGCC	7 cut(s)	374, 1089, 1326, 1889, 1924, 2237, 2257
Bso31I	GGTCTC	1 cut(s)	1581
BsoBI	CYCGRG	2 cut(s)	1136, 2428
Bsp119I	TTCGAA	1 cut(s)	1199
Bsp1286I	GDGCHC	1 cut(s)	1137
Bsp19I	CCATGG	2 cut(s)	1377, 2262
BspACI	CCGC	9 cut(s)	245, 309, 325, 390, 779, 1636, 1857, 1955, 2220
BspANI	GGCC	7 cut(s)	374, 1089, 1326, 1889, 1924, 2237, 2257
BspCNI	CTCAG	9 cut(s)	574, 808, 839, 987, 1185, 1199, 1751, 2005, 2193
BspFNI	CGCG	1 cut(s)	262
BspPI	GGATC	7 cut(s)	121, 316, 329, 872, 885, 1795, 1976
BspT104I	TTCGAA	1 cut(s)	1199
BspT107I	GGYRCC	1 cut(s)	1238
BspTI	CTTAAG	1 cut(s)	1753
BspTNI	GGTCTC	1 cut(s)	1581
BsrDI	GCAATG	3 cut(s)	741, 783, 2130
BsrI	ACTGG	2 cut(s)	1317, 1822
BssECI	CCNNGG	9 cut(s)	592, 861, 881, 1321, 1377, 1571, 1890, 2262, 2490
BssNAI	GTATAC	1 cut(s)	1519
BssNI	GRCGYC	1 cut(s)	2328
BssT1I	CCWWGG	5 cut(s)	1321, 1377, 1571, 1890, 2262
Bst1107I	GTATAC	1 cut(s)	1519
Bst2UI	CCWGG	5 cut(s)	593, 862, 882, 1206, 2322
Bst4CI	ACNGT	6 cut(s)	110, 133, 577, 799, 874, 1060
Bst6I	CTCTTC	3 cut(s)	973, 1301, 2094
BstACI	GRCGYC	1 cut(s)	2328
BstAFI	CTTAAG	1 cut(s)	1753
BstBAI	YACGTR	1 cut(s)	756
BstBI	TTCGAA	1 cut(s)	1199
BstC8I	GCNNGC	5 cut(s)	571, 1165, 1243, 2179, 2360
BstDSI	CCRYGG	2 cut(s)	1377, 2262
BstEII	GGTNACC	2 cut(s)	137, 1742
BstF5I	GGATG	2 cut(s)	182, 2443
BstFNI	CGCG	1 cut(s)	262
BstHHI	GCGC	2 cut(s)	262, 406
BstMAI	GTCTC	5 cut(s)	1303, 1581, 1651, 2091, 2431
BstMWI	GCNNNNNNNGC	6 cut(s)	770, 785, 1415, 1895, 2120, 2152
BstNI	CCWGG	5 cut(s)	593, 862, 882, 1206, 2322
BstPI	GGTNACC	2 cut(s)	137, 1742
BstSCI	CCNGG	5 cut(s)	591, 860, 880, 1204, 2320
BstSFI	CTRYAG	3 cut(s)	129, 1002, 1426
BstSNI	TACGTA	1 cut(s)	756
BstUI	CGCG	1 cut(s)	262
BstV1I	GCAGC	5 cut(s)	758, 1059, 1179, 1402, 2398
BstX2I	RGATCY	3 cut(s)	321, 877, 985
BstYI	RGATCY	3 cut(s)	321, 877, 985
BstZ17I	GTATAC	1 cut(s)	1519
BsuI	GTATCC	1 cut(s)	1967
BsuRI	GGCC	7 cut(s)	374, 1089, 1326, 1889, 1924, 2237, 2257
BtgI	CCRYGG	2 cut(s)	1377, 2262
BtgZI	GCGATG	1 cut(s)	930
BtsCI	GGATG	2 cut(s)	182, 2443
BtsI	GCAGTG	2 cut(s)	79, 1269
BtsIMutI	CAGTG	7 cut(s)	79, 138, 813, 1056, 1180, 1269, 1815
Cac8I	GCNNGC	5 cut(s)	571, 1165, 1243, 2179, 2360
CaiI	CAGNNNCTG	1 cut(s)	613
CfoI	GCGC	2 cut(s)	262, 406
Cfr13I	GGNCC	4 cut(s)	644, 1088, 1922, 2256
CseI	GACGC	1 cut(s)	2336
Csp6I	GTAC	6 cut(s)	286, 542, 946, 1454, 1950, 2343
CspCI	CAANNNNNGTGG	2 cut(s)	622, 657
CviAII	CATG	5 cut(s)	1354, 1378, 1885, 1943, 2263
CviQI	GTAC	6 cut(s)	286, 542, 946, 1454, 1950, 2343
DraI	TTTAAA	1 cut(s)	19
EaeI	YGGCCR	2 cut(s)	1887, 2235
Eam1104I	CTCTTC	3 cut(s)	973, 1301, 2094
EarI	CTCTTC	3 cut(s)	973, 1301, 2094
EciI	GGCGGA	2 cut(s)	314, 379
Eco105I	TACGTA	1 cut(s)	756
Eco130I	CCWWGG	5 cut(s)	1321, 1377, 1571, 1890, 2262
Eco24I	GRGCYC	1 cut(s)	1137
Eco31I	GGTCTC	1 cut(s)	1581
Eco47I	GGWCC	1 cut(s)	644
Eco57I	CTGAAG	4 cut(s)	450, 582, 1739, 2075
Eco88I	CYCGRG	2 cut(s)	1136, 2428
Eco91I	GGTNACC	2 cut(s)	137, 1742
EcoO109I	RGGNCCY	2 cut(s)	1922, 2256
EcoO65I	GGTNACC	2 cut(s)	137, 1742
EcoRII	CCWGG	5 cut(s)	591, 860, 880, 1204, 2320
EcoT14I	CCWWGG	5 cut(s)	1321, 1377, 1571, 1890, 2262
EcoT22I	ATGCAT	1 cut(s)	1784
EcoT38I	GRGCYC	1 cut(s)	1137
ErhI	CCWWGG	5 cut(s)	1321, 1377, 1571, 1890, 2262
Esp3I	CGTCTC	1 cut(s)	2091
FaeI	CATG	5 cut(s)	1357, 1381, 1888, 1946, 2266
FalI	AAGNNNNNCTT	4 cut(s)	275, 307, 640, 672
FaqI	GGGAC	1 cut(s)	1599
FatI	CATG	5 cut(s)	1353, 1377, 1884, 1942, 2262
FauNDI	CATATG	1 cut(s)	1396
FbaI	TGATCA	1 cut(s)	1933
FblI	GTMKAC	1 cut(s)	1518
Fnu4HI	GCNGC	6 cut(s)	245, 747, 1073, 1168, 1416, 2412
FokI	GGATG	2 cut(s)	169, 2450
FriOI	GRGCYC	1 cut(s)	1137
Fsp4HI	GCNGC	6 cut(s)	245, 747, 1073, 1168, 1416, 2412
FspBI	CTAG	5 cut(s)	152, 707, 1410, 1794, 2285
GlaI	GCGC	2 cut(s)	261, 405
GluI	GCNGC	6 cut(s)	245, 747, 1073, 1168, 1416, 2412
GsaI	CCCAGC	3 cut(s)	1278, 1489, 1752
GsuI	CTGGAG	1 cut(s)	966
HaeIII	GGCC	7 cut(s)	374, 1089, 1326, 1889, 1924, 2237, 2257
HgaI	GACGC	1 cut(s)	2336
HhaI	GCGC	2 cut(s)	262, 406
Hin1I	GRCGYC	1 cut(s)	2328
Hin1II	CATG	5 cut(s)	1357, 1381, 1888, 1946, 2266
Hin6I	GCGC	2 cut(s)	260, 404
HinP1I	GCGC	2 cut(s)	260, 404
HincII	GTYRAC	3 cut(s)	964, 2251, 2377
HindII	GTYRAC	3 cut(s)	964, 2251, 2377
HphI	GGTGA	7 cut(s)	466, 475, 481, 1625, 1969, 2116, 2494
Hpy166II	GTNNAC	9 cut(s)	288, 345, 644, 870, 964, 1519, 2107, 2251, 2377
Hpy8I	GTNNAC	9 cut(s)	288, 345, 644, 870, 964, 1519, 2107, 2251, 2377
Hpy99I	CGWCG	1 cut(s)	2330
HpyCH4III	ACNGT	6 cut(s)	110, 133, 577, 799, 874, 1060
HpyCH4IV	ACGT	3 cut(s)	755, 1221, 2391
HpyF10VI	GCNNNNNNNGC	6 cut(s)	770, 785, 1415, 1895, 2120, 2152
HpySE526I	ACGT	3 cut(s)	755, 1221, 2391
Hsp92I	GRCGYC	1 cut(s)	2328
Hsp92II	CATG	5 cut(s)	1357, 1381, 1888, 1946, 2266
HspAI	GCGC	2 cut(s)	260, 404
Ksp22I	TGATCA	1 cut(s)	1933
LmnI	GCTCC	5 cut(s)	411, 793, 985, 1178, 2152
Lsp1109I	GCAGC	5 cut(s)	758, 1059, 1179, 1402, 2398
LweI	GCATC	2 cut(s)	556, 1605
MaeI	CTAG	5 cut(s)	152, 707, 1410, 1794, 2285
MaeII	ACGT	3 cut(s)	755, 1221, 2391
MboII	GAAGA	8 cut(s)	259, 575, 960, 1311, 1318, 2081, 2149, 2345
MflI	RGATCY	3 cut(s)	321, 877, 985
MhlI	GDGCHC	1 cut(s)	1137
MlsI	TGGCCA	1 cut(s)	1889
MluNI	TGGCCA	1 cut(s)	1889
MlyI	GAGTC	3 cut(s)	959, 2159, 2399
MmeI	TCCRAC	3 cut(s)	1204, 1739, 2130
Mox20I	TGGCCA	1 cut(s)	1889
Mph1103I	ATGCAT	1 cut(s)	1784
MroXI	GAANNNNTTC	1 cut(s)	1366
MscI	TGGCCA	1 cut(s)	1889
MseI	TTAA	3 cut(s)	18, 1011, 1754
MslI	CAYNNNNRTG	3 cut(s)	818, 1731, 1845
Msp20I	TGGCCA	1 cut(s)	1889
MspA1I	CMGCKG	4 cut(s)	247, 749, 943, 2479
MspCI	CTTAAG	1 cut(s)	1753
MspR9I	CCNGG	5 cut(s)	593, 862, 882, 1206, 2322
Mva1269I	GAATGC	1 cut(s)	512
MvaI	CCWGG	5 cut(s)	593, 862, 882, 1206, 2322
MvnI	CGCG	1 cut(s)	262
MwoI	GCNNNNNNNGC	6 cut(s)	770, 785, 1415, 1895, 2120, 2152
NcoI	CCATGG	2 cut(s)	1377, 2262
NdeI	CATATG	1 cut(s)	1396
NlaIII	CATG	5 cut(s)	1357, 1381, 1888, 1946, 2266
NmeAIII	GCCGAG	1 cut(s)	2248
NmuCI	GTSAC	2 cut(s)	460, 1631
NsiI	ATGCAT	1 cut(s)	1784
NspV	TTCGAA	1 cut(s)	1199
PaeR7I	CTCGAG	2 cut(s)	1136, 2428
PctI	GAATGC	1 cut(s)	512
PdmI	GAANNNNTTC	1 cut(s)	1366
PkrI	GCNGC	6 cut(s)	246, 748, 1074, 1169, 1417, 2413
PleI	GAGTC	3 cut(s)	959, 2159, 2399
PpsI	GAGTC	3 cut(s)	959, 2159, 2399
Ppu21I	YACGTR	1 cut(s)	756
Psp1406I	AACGTT	2 cut(s)	1221, 2391
Psp6I	CCWGG	5 cut(s)	591, 860, 880, 1204, 2320
PspEI	GGTNACC	2 cut(s)	137, 1742
PspFI	CCCAGC	3 cut(s)	1274, 1485, 1748
PspGI	CCWGG	5 cut(s)	591, 860, 880, 1204, 2320
PspPI	GGNCC	4 cut(s)	644, 1088, 1922, 2256
PstNI	CAGNNNCTG	1 cut(s)	613
PsuI	RGATCY	3 cut(s)	321, 877, 985
PvuII	CAGCTG	3 cut(s)	749, 943, 2479
RsaI	GTAC	6 cut(s)	287, 543, 947, 1455, 1951, 2344
RsaNI	GTAC	6 cut(s)	286, 542, 946, 1454, 1950, 2343
RseI	CAYNNNNRTG	3 cut(s)	818, 1731, 1845
SaqAI	TTAA	3 cut(s)	18, 1011, 1754
SatI	GCNGC	6 cut(s)	245, 747, 1073, 1168, 1416, 2412
Sau96I	GGNCC	4 cut(s)	644, 1088, 1922, 2256
SchI	GAGTC	3 cut(s)	959, 2159, 2399
ScrFI	CCNGG	5 cut(s)	593, 862, 882, 1206, 2322
SduI	GDGCHC	1 cut(s)	1137
SfaNI	GCATC	2 cut(s)	556, 1605
SfcI	CTRYAG	3 cut(s)	129, 1002, 1426
Sfr274I	CTCGAG	2 cut(s)	1136, 2428
SfuI	TTCGAA	1 cut(s)	1199
SinI	GGWCC	1 cut(s)	644
SlaI	CTCGAG	2 cut(s)	1136, 2428
SmiMI	CAYNNNNRTG	3 cut(s)	818, 1731, 1845
SmlI	CTYRAG	3 cut(s)	1136, 1753, 2428
SmoI	CTYRAG	3 cut(s)	1136, 1753, 2428
SnaBI	TACGTA	1 cut(s)	756
SsiI	CCGC	9 cut(s)	245, 309, 325, 390, 779, 1636, 1857, 1955, 2220
SspI	AATATT	1 cut(s)	1991
SspMI	CTAG	5 cut(s)	152, 707, 1410, 1794, 2285
StyD4I	CCNGG	5 cut(s)	591, 860, 880, 1204, 2320
StyI	CCWWGG	5 cut(s)	1321, 1377, 1571, 1890, 2262
TaaI	ACNGT	6 cut(s)	110, 133, 577, 799, 874, 1060
TaiI	ACGT	3 cut(s)	758, 1224, 2394
TaqI	TCGA	7 cut(s)	660, 737, 901, 990, 1137, 1199, 2429
TatI	WGTACW	3 cut(s)	285, 945, 1453
TauI	GCSGC	1 cut(s)	247
Tru1I	TTAA	3 cut(s)	18, 1011, 1754
Tru9I	TTAA	3 cut(s)	18, 1011, 1754
TscAI	CASTG	7 cut(s)	79, 138, 820, 1063, 1180, 1269, 1822
TseFI	GTSAC	2 cut(s)	460, 1631
TseI	GCWGC	5 cut(s)	746, 1072, 1167, 1415, 2411
Tsp45I	GTSAC	2 cut(s)	460, 1631
TspGWI	ACGGA	4 cut(s)	330, 1374, 1619, 1725
TspRI	CASTG	7 cut(s)	79, 138, 820, 1063, 1180, 1269, 1822
Vha464I	CTTAAG	1 cut(s)	1753
VpaK11BI	GGWCC	1 cut(s)	644
XapI	RAATTY	5 cut(s)	20, 377, 446, 587, 2207
XcmI	CCANNNNNNNNNTGG	1 cut(s)	130
XhoI	CTCGAG	2 cut(s)	1136, 2428
XmiI	GTMKAC	1 cut(s)	1518
XmnI	GAANNNNTTC	1 cut(s)	1366
XspI	CTAG	5 cut(s)	152, 707, 1410, 1794, 2285
Zsp2I	ATGCAT	1 cut(s)	1784

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.