Belongs to the protein kinase superfamily
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G46290 AT5G59700 |
| fragaria_vesca | FvH4_3g34580 |
| malus_domestica | MD03G1103600.v1.1 MD11G1117300.v1.1 |
| prunus_persica | Prupe.6G087700_v2.0.a1 Prupe.6G087700_v2.0.a1 Prupe.6G087900_v2.0.a1 |
| pyrus_communis | pycom03g08440 pycom11g09850 |
| rosa_chinensis | RchiOBHm_Chr5g0062291 |
| rosa_laevigata | RLG00000035547 |
| rosa_multiflora | Rmu_ssc0000409.1_g000029 |
| rosa_roxburghii | Rroxscaffold_1G00018430 Rroxscaffold_1G00018440 |
| rosa_rugosa | Rorug05G0347400 |
| rosa_samantha | Rh5AG408100 Rh5BG421900 Rh5CG445900 Rh5DG436900 |
| rosa_wichuraiana | Rw5G038460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1250 |
| AccI | GTMKAC | 1 cut(s) | 1527 |
| AccII | CGCG | 1 cut(s) | 836 |
| AciI | CCGC | 8 cut(s) | 242, 322, 764, 834, 836, 1645, 2229, 2378 |
| AclWI | GGATC | 9 cut(s) | 118, 313, 326, 836, 878, 891, 1804, 1985, 2084 |
| AcoI | YGGCCR | 1 cut(s) | 1896 |
| AcsI | RAATTY | 7 cut(s) | 17, 170, 446, 587, 1213, 2216, 2325 |
| AcuI | CTGAAG | 4 cut(s) | 111, 450, 1748, 2361 |
| AfaI | GTAC | 7 cut(s) | 284, 899, 953, 1006, 1464, 1960, 2353 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 576, 1260, 1929, 2103, 2104, 2273 |
| AflII | CTTAAG | 1 cut(s) | 1762 |
| AjnI | CCWGG | 4 cut(s) | 591, 886, 1329, 2329 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 384, 416, 839, 871, 1776, 1808, 2141, 2173 |
| AleI | CACNNNNGTG | 1 cut(s) | 918 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 673, 705 |
| AluBI | AGCT | 9 cut(s) | 749, 867, 949, 1081, 1440, 1761, 1802, 2371, 2488 |
| AluI | AGCT | 9 cut(s) | 749, 867, 949, 1081, 1440, 1761, 1802, 2371, 2488 |
| Alw26I | GTCTC | 6 cut(s) | 304, 611, 739, 1590, 1660, 2440 |
| AlwI | GGATC | 9 cut(s) | 118, 313, 326, 836, 878, 891, 1804, 1985, 2084 |
| Ama87I | CYCGRG | 1 cut(s) | 987 |
| AoxI | GGCC | 5 cut(s) | 1096, 1333, 1896, 1931, 2264 |
| ApeKI | GCWGC | 6 cut(s) | 746, 1064, 1176, 1286, 1424, 2420 |
| ApoI | RAATTY | 7 cut(s) | 17, 170, 446, 587, 1213, 2216, 2325 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 595, 627 |
| AseI | ATTAAT | 1 cut(s) | 1365 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1375 |
| AspS9I | GGNCC | 6 cut(s) | 644, 1097, 1333, 1931, 2065, 2265 |
| AsuHPI | GGTGA | 8 cut(s) | 146, 422, 481, 643, 1634, 2125, 2345, 2503 |
| AvaI | CYCGRG | 1 cut(s) | 987 |
| AvaII | GGWCC | 2 cut(s) | 644, 2065 |
| BalI | TGGCCA | 1 cut(s) | 1898 |
| BamHI | GGATCC | 2 cut(s) | 318, 883 |
| BanI | GGYRCC | 1 cut(s) | 1250 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1084, 1116 |
| BbvI | GCAGC | 6 cut(s) | 758, 1051, 1188, 1273, 1411, 2407 |
| BccI | CCATC | 3 cut(s) | 54, 1541, 1656 |
| BceAI | ACGGC | 1 cut(s) | 270 |
| BciT130I | CCWGG | 4 cut(s) | 593, 888, 1331, 2331 |
| BciVI | GTATCC | 1 cut(s) | 1976 |
| BclI | TGATCA | 2 cut(s) | 555, 694 |
| BcoDI | GTCTC | 6 cut(s) | 304, 611, 739, 1590, 1660, 2440 |
| BfaI | CTAG | 5 cut(s) | 707, 1199, 1419, 1803, 2294 |
| BfmI | CTRYAG | 1 cut(s) | 1435 |
| BfrI | CTTAAG | 1 cut(s) | 1762 |
| BfuI | GTATCC | 1 cut(s) | 1976 |
| BglII | AGATCT | 1 cut(s) | 991 |
| BisI | GCNGC | 7 cut(s) | 242, 747, 1065, 1177, 1287, 1425, 2421 |
| BlsI | GCNGC | 7 cut(s) | 243, 748, 1066, 1178, 1288, 1426, 2422 |
| BmcAI | AGTACT | 1 cut(s) | 1006 |
| Bme1390I | CCNGG | 4 cut(s) | 593, 888, 1331, 2331 |
| Bme18I | GGWCC | 2 cut(s) | 644, 2065 |
| BmeT110I | CYCGRG | 1 cut(s) | 987 |
| BmgT120I | GGNCC | 6 cut(s) | 644, 1097, 1333, 1931, 2065, 2265 |
| BmiI | GGNNCC | 8 cut(s) | 320, 690, 814, 885, 1252, 1372, 1723, 1932 |
| BmrFI | CCNGG | 4 cut(s) | 593, 888, 1331, 2331 |
| BmrI | ACTGGG | 1 cut(s) | 585 |
| BmsI | GCATC | 4 cut(s) | 556, 751, 1614, 2326 |
| BmuI | ACTGGG | 1 cut(s) | 585 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1747 |
| BpuEI | CTTGAG | 2 cut(s) | 1166, 2422 |
| Bsa29I | ATCGAT | 1 cut(s) | 1941 |
| BsaBI | GATNNNNATC | 1 cut(s) | 996 |
| BsaI | GGTCTC | 1 cut(s) | 1590 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1230, 1260, 2252, 2282 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 576, 1260, 1929, 2103, 2104, 2273 |
| Bse1I | ACTGG | 4 cut(s) | 320, 580, 1326, 1831 |
| Bse3DI | GCAATG | 1 cut(s) | 2139 |
| Bse8I | GATNNNNATC | 1 cut(s) | 996 |
| BseBI | CCWGG | 4 cut(s) | 593, 888, 1331, 2331 |
| BseCI | ATCGAT | 1 cut(s) | 1941 |
| BseGI | GGATG | 3 cut(s) | 65, 844, 2452 |
| BseJI | GATNNNNATC | 1 cut(s) | 996 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 576, 1260, 1929, 2103, 2104, 2273 |
| BseMI | GCAATG | 1 cut(s) | 2139 |
| BseMII | CTCAG | 7 cut(s) | 620, 813, 992, 1195, 1761, 2224, 2490 |
| BseNI | ACTGG | 4 cut(s) | 320, 580, 1326, 1831 |
| BseXI | GCAGC | 6 cut(s) | 758, 1051, 1188, 1273, 1411, 2407 |
| BseYI | CCCAGC | 2 cut(s) | 867, 1757 |
| BsgI | GTGCAG | 1 cut(s) | 2406 |
| Bsh1236I | CGCG | 1 cut(s) | 836 |
| BshFI | GGCC | 5 cut(s) | 1098, 1335, 1898, 1933, 2266 |
| BshNI | GGYRCC | 1 cut(s) | 1250 |
| BshVI | ATCGAT | 1 cut(s) | 1941 |
| BsiHKCI | CYCGRG | 1 cut(s) | 987 |
| BslFI | GGGAC | 3 cut(s) | 527, 1608, 2080 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 576, 1260, 1929, 2103, 2104, 2273 |
| BsmAI | GTCTC | 6 cut(s) | 304, 611, 739, 1590, 1660, 2440 |
| BsmFI | GGGAC | 3 cut(s) | 527, 1608, 2080 |
| BsmI | GAATGC | 1 cut(s) | 512 |
| BsnI | GGCC | 5 cut(s) | 1098, 1335, 1898, 1933, 2266 |
| Bso31I | GGTCTC | 1 cut(s) | 1590 |
| BsoBI | CYCGRG | 1 cut(s) | 987 |
| Bsp1407I | TGTACA | 1 cut(s) | 1462 |
| Bsp19I | CCATGG | 2 cut(s) | 1386, 2271 |
| BspACI | CCGC | 8 cut(s) | 242, 322, 764, 834, 836, 1645, 2229, 2378 |
| BspANI | GGCC | 5 cut(s) | 1098, 1335, 1898, 1933, 2266 |
| BspCNI | CTCAG | 7 cut(s) | 619, 814, 993, 1194, 1760, 2223, 2491 |
| BspDI | ATCGAT | 1 cut(s) | 1941 |
| BspFNI | CGCG | 1 cut(s) | 836 |
| BspLI | GGNNCC | 8 cut(s) | 320, 690, 814, 885, 1252, 1372, 1723, 1932 |
| BspPI | GGATC | 9 cut(s) | 118, 313, 326, 836, 878, 891, 1804, 1985, 2084 |
| BspT107I | GGYRCC | 1 cut(s) | 1250 |
| BspTI | CTTAAG | 1 cut(s) | 1762 |
| BspTNI | GGTCTC | 1 cut(s) | 1590 |
| BsrDI | GCAATG | 1 cut(s) | 2139 |
| BsrGI | TGTACA | 1 cut(s) | 1462 |
| BsrI | ACTGG | 4 cut(s) | 320, 580, 1326, 1831 |
| BssNAI | GTATAC | 1 cut(s) | 1528 |
| BssT1I | CCWWGG | 6 cut(s) | 406, 783, 1386, 1899, 2102, 2271 |
| Bst1107I | GTATAC | 1 cut(s) | 1528 |
| Bst2UI | CCWGG | 4 cut(s) | 593, 888, 1331, 2331 |
| Bst4CI | ACNGT | 7 cut(s) | 107, 140, 652, 805, 880, 1584, 2427 |
| Bst6I | CTCTTC | 1 cut(s) | 1724 |
| BstAFI | CTTAAG | 1 cut(s) | 1762 |
| BstAUI | TGTACA | 1 cut(s) | 1462 |
| BstC8I | GCNNGC | 4 cut(s) | 117, 1174, 1255, 2369 |
| BstDEI | CTNAG | 8 cut(s) | 606, 822, 1001, 1181, 1341, 1747, 2210, 2499 |
| BstDSI | CCRYGG | 4 cut(s) | 834, 1386, 1580, 2271 |
| BstEII | GGTNACC | 2 cut(s) | 134, 1751 |
| BstF5I | GGATG | 3 cut(s) | 65, 844, 2452 |
| BstFNI | CGCG | 1 cut(s) | 836 |
| BstMAI | GTCTC | 6 cut(s) | 304, 611, 739, 1590, 1660, 2440 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 722, 770, 1424, 1904, 2129, 2161, 2377 |
| BstNI | CCWGG | 4 cut(s) | 593, 888, 1331, 2331 |
| BstPI | GGTNACC | 2 cut(s) | 134, 1751 |
| BstSCI | CCNGG | 4 cut(s) | 591, 886, 1329, 2329 |
| BstSFI | CTRYAG | 1 cut(s) | 1435 |
| BstUI | CGCG | 1 cut(s) | 836 |
| BstV1I | GCAGC | 6 cut(s) | 758, 1051, 1188, 1273, 1411, 2407 |
| BstX2I | RGATCY | 4 cut(s) | 318, 883, 991, 2089 |
| BstYI | RGATCY | 4 cut(s) | 318, 883, 991, 2089 |
| BstZ17I | GTATAC | 1 cut(s) | 1528 |
| Bsu15I | ATCGAT | 1 cut(s) | 1941 |
| BsuI | GTATCC | 1 cut(s) | 1976 |
| BsuRI | GGCC | 5 cut(s) | 1098, 1335, 1898, 1933, 2266 |
| BsuTUI | ATCGAT | 1 cut(s) | 1941 |
| BtgI | CCRYGG | 4 cut(s) | 834, 1386, 1580, 2271 |
| BtsCI | GGATG | 3 cut(s) | 65, 844, 2452 |
| BtsI | GCAGTG | 1 cut(s) | 1281 |
| Cac8I | GCNNGC | 4 cut(s) | 117, 1174, 1255, 2369 |
| Cfr13I | GGNCC | 6 cut(s) | 644, 1097, 1333, 1931, 2065, 2265 |
| Cfr42I | CCGCGG | 1 cut(s) | 837 |
| ClaI | ATCGAT | 1 cut(s) | 1941 |
| CseI | GACGC | 1 cut(s) | 2414 |
| Csp6I | GTAC | 7 cut(s) | 283, 898, 952, 1005, 1463, 1959, 2352 |
| CviAII | CATG | 6 cut(s) | 398, 1347, 1387, 1894, 1952, 2272 |
| CviQI | GTAC | 7 cut(s) | 283, 898, 952, 1005, 1463, 1959, 2352 |
| DdeI | CTNAG | 8 cut(s) | 606, 822, 1001, 1181, 1341, 1747, 2210, 2499 |
| DraI | TTTAAA | 1 cut(s) | 1110 |
| EaeI | YGGCCR | 1 cut(s) | 1896 |
| Eam1104I | CTCTTC | 1 cut(s) | 1724 |
| EarI | CTCTTC | 1 cut(s) | 1724 |
| EciI | GGCGGA | 1 cut(s) | 311 |
| Eco130I | CCWWGG | 6 cut(s) | 406, 783, 1386, 1899, 2102, 2271 |
| Eco31I | GGTCTC | 1 cut(s) | 1590 |
| Eco47I | GGWCC | 2 cut(s) | 644, 2065 |
| Eco57I | CTGAAG | 4 cut(s) | 111, 450, 1748, 2361 |
| Eco88I | CYCGRG | 1 cut(s) | 987 |
| Eco91I | GGTNACC | 2 cut(s) | 134, 1751 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1931, 2065, 2265 |
| EcoO65I | GGTNACC | 2 cut(s) | 134, 1751 |
| EcoRII | CCWGG | 4 cut(s) | 591, 886, 1329, 2329 |
| EcoT14I | CCWWGG | 6 cut(s) | 406, 783, 1386, 1899, 2102, 2271 |
| EcoT22I | ATGCAT | 1 cut(s) | 1793 |
| ErhI | CCWWGG | 6 cut(s) | 406, 783, 1386, 1899, 2102, 2271 |
| FaeI | CATG | 6 cut(s) | 401, 1350, 1390, 1897, 1955, 2275 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 272, 304 |
| FaqI | GGGAC | 3 cut(s) | 527, 1608, 2080 |
| FatI | CATG | 6 cut(s) | 397, 1346, 1386, 1893, 1951, 2271 |
| FauI | CCCGC | 2 cut(s) | 757, 2385 |
| FauNDI | CATATG | 1 cut(s) | 1405 |
| FbaI | TGATCA | 2 cut(s) | 555, 694 |
| FblI | GTMKAC | 1 cut(s) | 1527 |
| Fnu4HI | GCNGC | 7 cut(s) | 242, 747, 1065, 1177, 1287, 1425, 2421 |
| FokI | GGATG | 3 cut(s) | 72, 851, 2459 |
| Fsp4HI | GCNGC | 7 cut(s) | 242, 747, 1065, 1177, 1287, 1425, 2421 |
| FspBI | CTAG | 5 cut(s) | 707, 1199, 1419, 1803, 2294 |
| GluI | GCNGC | 7 cut(s) | 242, 747, 1065, 1177, 1287, 1425, 2421 |
| GsaI | CCCAGC | 2 cut(s) | 871, 1761 |
| HaeIII | GGCC | 5 cut(s) | 1098, 1335, 1898, 1933, 2266 |
| HgaI | GACGC | 1 cut(s) | 2414 |
| Hin1II | CATG | 6 cut(s) | 401, 1350, 1390, 1897, 1955, 2275 |
| HincII | GTYRAC | 4 cut(s) | 754, 2260, 2386, 2404 |
| HindII | GTYRAC | 4 cut(s) | 754, 2260, 2386, 2404 |
| HindIII | AAGCTT | 1 cut(s) | 1079 |
| HpaI | GTTAAC | 1 cut(s) | 754 |
| HphI | GGTGA | 8 cut(s) | 146, 422, 481, 643, 1634, 2125, 2345, 2503 |
| Hpy166II | GTNNAC | 9 cut(s) | 285, 644, 754, 876, 1528, 2116, 2260, 2386, 2404 |
| Hpy188I | TCNGA | 7 cut(s) | 469, 1002, 1238, 1698, 2032, 2198, 2500 |
| Hpy8I | GTNNAC | 9 cut(s) | 285, 644, 754, 876, 1528, 2116, 2260, 2386, 2404 |
| Hpy99I | CGWCG | 1 cut(s) | 1238 |
| HpyCH4III | ACNGT | 7 cut(s) | 107, 140, 652, 805, 880, 1584, 2427 |
| HpyCH4IV | ACGT | 1 cut(s) | 1233 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 722, 770, 1424, 1904, 2129, 2161, 2377 |
| HpyF3I | CTNAG | 8 cut(s) | 606, 822, 1001, 1181, 1341, 1747, 2210, 2499 |
| HpySE526I | ACGT | 1 cut(s) | 1233 |
| Hsp92II | CATG | 6 cut(s) | 401, 1350, 1390, 1897, 1955, 2275 |
| Ksp22I | TGATCA | 2 cut(s) | 555, 694 |
| KspAI | GTTAAC | 1 cut(s) | 754 |
| KspI | CCGCGG | 1 cut(s) | 837 |
| LmnI | GCTCC | 3 cut(s) | 799, 1187, 2161 |
| Lsp1109I | GCAGC | 6 cut(s) | 758, 1051, 1188, 1273, 1411, 2407 |
| LweI | GCATC | 4 cut(s) | 556, 751, 1614, 2326 |
| MaeI | CTAG | 5 cut(s) | 707, 1199, 1419, 1803, 2294 |
| MaeII | ACGT | 1 cut(s) | 1233 |
| MaeIII | GTNAC | 6 cut(s) | 134, 353, 1051, 1229, 1640, 1751 |
| MboII | GAAGA | 4 cut(s) | 1200, 1741, 2158, 2354 |
| MflI | RGATCY | 4 cut(s) | 318, 883, 991, 2089 |
| MlsI | TGGCCA | 1 cut(s) | 1898 |
| MluNI | TGGCCA | 1 cut(s) | 1898 |
| MlyI | GAGTC | 4 cut(s) | 598, 965, 1545, 1741 |
| MmeI | TCCRAC | 4 cut(s) | 522, 1216, 1748, 2139 |
| Mox20I | TGGCCA | 1 cut(s) | 1898 |
| Mph1103I | ATGCAT | 1 cut(s) | 1793 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1375 |
| MscI | TGGCCA | 1 cut(s) | 1898 |
| MseI | TTAA | 7 cut(s) | 78, 518, 753, 1109, 1365, 1541, 1763 |
| MslI | CAYNNNNRTG | 4 cut(s) | 824, 918, 1740, 1854 |
| Msp20I | TGGCCA | 1 cut(s) | 1898 |
| MspA1I | CMGCKG | 5 cut(s) | 244, 749, 836, 949, 2488 |
| MspCI | CTTAAG | 1 cut(s) | 1762 |
| MspR9I | CCNGG | 4 cut(s) | 593, 888, 1331, 2331 |
| Mva1269I | GAATGC | 1 cut(s) | 512 |
| MvaI | CCWGG | 4 cut(s) | 593, 888, 1331, 2331 |
| MvnI | CGCG | 1 cut(s) | 836 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 722, 770, 1424, 1904, 2129, 2161, 2377 |
| NcoI | CCATGG | 2 cut(s) | 1386, 2271 |
| NdeI | CATATG | 1 cut(s) | 1405 |
| NlaIII | CATG | 6 cut(s) | 401, 1350, 1390, 1897, 1955, 2275 |
| NlaIV | GGNNCC | 8 cut(s) | 320, 690, 814, 885, 1252, 1372, 1723, 1932 |
| NmeAIII | GCCGAG | 1 cut(s) | 2257 |
| NmuCI | GTSAC | 3 cut(s) | 134, 1051, 1640 |
| NsiI | ATGCAT | 1 cut(s) | 1793 |
| OliI | CACNNNNGTG | 1 cut(s) | 918 |
| PaeR7I | CTCGAG | 1 cut(s) | 987 |
| PctI | GAATGC | 1 cut(s) | 512 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1375 |
| PfeI | GAWTC | 9 cut(s) | 236, 261, 272, 1291, 1693, 2174, 2204, 2290, 2414 |
| PflFI | GACNNNGTC | 1 cut(s) | 140 |
| PfoI | TCCNGGA | 1 cut(s) | 886 |
| PkrI | GCNGC | 7 cut(s) | 243, 748, 1066, 1178, 1288, 1426, 2422 |
| PleI | GAGTC | 4 cut(s) | 598, 965, 1544, 1740 |
| PpsI | GAGTC | 4 cut(s) | 598, 965, 1544, 1740 |
| PpuMI | RGGWCCY | 1 cut(s) | 2065 |
| PshBI | ATTAAT | 1 cut(s) | 1365 |
| Psp5II | RGGWCCY | 1 cut(s) | 2065 |
| Psp6I | CCWGG | 4 cut(s) | 591, 886, 1329, 2329 |
| PspEI | GGTNACC | 2 cut(s) | 134, 1751 |
| PspFI | CCCAGC | 2 cut(s) | 867, 1757 |
| PspGI | CCWGG | 4 cut(s) | 591, 886, 1329, 2329 |
| PspN4I | GGNNCC | 8 cut(s) | 320, 690, 814, 885, 1252, 1372, 1723, 1932 |
| PspPI | GGNCC | 6 cut(s) | 644, 1097, 1333, 1931, 2065, 2265 |
| PspPPI | RGGWCCY | 1 cut(s) | 2065 |
| PsuI | RGATCY | 4 cut(s) | 318, 883, 991, 2089 |
| PsyI | GACNNNGTC | 1 cut(s) | 140 |
| PvuII | CAGCTG | 3 cut(s) | 749, 949, 2488 |
| RsaI | GTAC | 7 cut(s) | 284, 899, 953, 1006, 1464, 1960, 2353 |
| RsaNI | GTAC | 7 cut(s) | 283, 898, 952, 1005, 1463, 1959, 2352 |
| RseI | CAYNNNNRTG | 4 cut(s) | 824, 918, 1740, 1854 |
| SacII | CCGCGG | 1 cut(s) | 837 |
| SaqAI | TTAA | 7 cut(s) | 78, 518, 753, 1109, 1365, 1541, 1763 |
| SatI | GCNGC | 7 cut(s) | 242, 747, 1065, 1177, 1287, 1425, 2421 |
| Sau96I | GGNCC | 6 cut(s) | 644, 1097, 1333, 1931, 2065, 2265 |
| ScaI | AGTACT | 1 cut(s) | 1006 |
| SchI | GAGTC | 4 cut(s) | 598, 965, 1545, 1741 |
| ScrFI | CCNGG | 4 cut(s) | 593, 888, 1331, 2331 |
| SfaNI | GCATC | 4 cut(s) | 556, 751, 1614, 2326 |
| SfcI | CTRYAG | 1 cut(s) | 1435 |
| Sfr274I | CTCGAG | 1 cut(s) | 987 |
| Sfr303I | CCGCGG | 1 cut(s) | 837 |
| SgrBI | CCGCGG | 1 cut(s) | 837 |
| SinI | GGWCC | 2 cut(s) | 644, 2065 |
| SlaI | CTCGAG | 1 cut(s) | 987 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 824, 918, 1740, 1854 |
| SmlI | CTYRAG | 4 cut(s) | 987, 1145, 1762, 2437 |
| SmoI | CTYRAG | 4 cut(s) | 987, 1145, 1762, 2437 |
| SsiI | CCGC | 8 cut(s) | 242, 322, 764, 834, 836, 1645, 2229, 2378 |
| SspI | AATATT | 4 cut(s) | 205, 742, 1873, 2000 |
| SspMI | CTAG | 5 cut(s) | 707, 1199, 1419, 1803, 2294 |
| StyD4I | CCNGG | 4 cut(s) | 591, 886, 1329, 2329 |
| StyI | CCWWGG | 6 cut(s) | 406, 783, 1386, 1899, 2102, 2271 |
| TaaI | ACNGT | 7 cut(s) | 107, 140, 652, 805, 880, 1584, 2427 |
| TaiI | ACGT | 1 cut(s) | 1236 |
| TaqI | TCGA | 2 cut(s) | 988, 1941 |
| TatI | WGTACW | 5 cut(s) | 282, 951, 1004, 1462, 1958 |
| TauI | GCSGC | 1 cut(s) | 244 |
| TfiI | GAWTC | 9 cut(s) | 236, 261, 272, 1291, 1693, 2174, 2204, 2290, 2414 |
| Tru1I | TTAA | 7 cut(s) | 78, 518, 753, 1109, 1365, 1541, 1763 |
| Tru9I | TTAA | 7 cut(s) | 78, 518, 753, 1109, 1365, 1541, 1763 |
| TseFI | GTSAC | 3 cut(s) | 134, 1051, 1640 |
| TseI | GCWGC | 6 cut(s) | 746, 1064, 1176, 1286, 1424, 2420 |
| Tsp45I | GTSAC | 3 cut(s) | 134, 1051, 1640 |
| TspDTI | ATGAA | 9 cut(s) | 19, 495, 842, 1169, 1719, 1838, 1899, 2031, 2150 |
| TspGWI | ACGGA | 4 cut(s) | 1058, 1628, 1734, 2082 |
| Tth111I | GACNNNGTC | 1 cut(s) | 140 |
| Vha464I | CTTAAG | 1 cut(s) | 1762 |
| VpaK11BI | GGWCC | 2 cut(s) | 644, 2065 |
| VspI | ATTAAT | 1 cut(s) | 1365 |
| XapI | RAATTY | 7 cut(s) | 17, 170, 446, 587, 1213, 2216, 2325 |
| XbaI | TCTAGA | 1 cut(s) | 2293 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 127, 404 |
| XhoI | CTCGAG | 1 cut(s) | 987 |
| XmiI | GTMKAC | 1 cut(s) | 1527 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1375 |
| XspI | CTAG | 5 cut(s) | 707, 1199, 1419, 1803, 2294 |
| ZrmI | AGTACT | 1 cut(s) | 1006 |
| Zsp2I | ATGCAT | 1 cut(s) | 1793 |