Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0009926

Physical Location & Seq

Genomic Coordinates Forward (+)

6829559 .. 6833981

Gene Structure 4423 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g08440.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3054 bp

ATGCCTAAAAGAATCTTTGAACCTGTCAGTATCCATCTAGTTTGGCATCTACTTCAAACCAGCTTGTGTTTTGCCAGATTTGCATACAATCTTGATTGTTCTTCCTCTTATTTGCAATTTTTCATAACTTTAGAGGGAGAAAGAGAGAAAAAAAAACTGCTACTGAAACCTCAAAAGATTGCATCAGATTTGTTTTGGAGCTCAGTAGATCTCAAAGGTGACATCTTTTCACTTCTCCAATCAATTCTGTTTCTGGTTCTTGGGTTCCTCAATAAATTTCCCAACTTTTGGATGATGGGTTGTTTTAAATTTGATCTGTTCATTTGGGTTTTATCCCCATTGTGTTTGGGATTGTTGTGTAGTGGATTTGTTCCTGCTGACAATTACCTTATAGACTGTGGATCACTTGCCAATACTGCAGTGAGTAACCGTGTTTTTCTAGCTGATAACTTGGCTTCCAAATATCTTTCATCCCCAAAAGACGTTGTTGCCAATGTTTCTTTGAAATCAATCACTTCCTTTGATGATTCACCGCTGTATCAGACAGCGCGAATCTTCCCGGAATCCTCTAAGTACACCTTTTCCATAAGCCATAGCGGTAGGCATTGGATCCGCCTTTACTTCTATCCGTTTGTTTTTGGTAGTTATGATCTGAGCAAGGCGAAGTTCTCCATTTCCGCCCAAAACTTTGCCCTCCTTACTGATTTCAGTGTTCAAAACACTTCTCTTAAAGAATTTTCGGTGAACGTGACTTCAGATAGCCTTGTTATCACCTTCACCCCGTCCAGCAACTCGTTTGCATTCCTAAATGCTATAGAAGTTGTTTCAGTCCCCGACCAACTCATCACTGATGATGCCAGCTATGGGTCAGAGAAATTCCAGGGTTTGACGAATCAGGCTCTGGAGACAGCTTGGAGGGTGAATATGGGTGGACCAAGAGTGTCTTTTGAGAATGATACCCTGTGGCGTACTTGGGTTCCTGACCAAAGTTTTCTAGTAAATGAGAACCTTGCAAAAGATTTTTCGAACATTGCAGCTGTTAAGTATGATGTTGGTTTGGCAACTGAAGACATTGCTCCACAAACTGTCTATGGAACCCTTACTGAGATGAACTCGGCAGATAATCCAAACAGCAATTTCAATGTTACCTGGGAGTTCACAGTGGATCCAGGATTCCAATACCTTGTTCGATTTCACTTTTGCGATATAGTAAGTAAATCTCTCAATCAGCTGTACTTCAATGTTTATGTTGACTCTTCCAATGTTGCTCCAGATCTTGATCTGAGTACTGCGACAATTAATAAGTTGGCTGTGCCATATTATCTGGACACTGTTACAGCGTCCATTGTGAGAAATAAGCTGCGTATTAGTATTGGCCCTTCTGCTGTAAACAATGCTTATCCCAATGCCATTCTAAATGGGCTCGAGATTATGAAAATAAACAACTCAGCAGGCAGCCTCAGTGGAACAAACGCAGCAGTTTCTTCTTTGAATTCAAGTTCGAAAAGTAACATTGGAGTAATTGTGGGTGCCAGCGTTGGGTCATTTATTGCAGTGGCATTGGCTGGGGTTCTCTTTATTCTGTGCAGAAGAAGGAAGAGACTGGCAGATCAAGGCCATTCAAAGACTTGGAGTCCCTTTTCCATGAATGGAACCAATTCTCACACCATGGGAAGTAAATACTCATATGGGACAACTGCTAGTGCTGCTTCTAACTATAGCTATCGTTTTCCTTTTGGGGTAGTGCAGGAGGCTACGAATAACTTTGATGAGAGCTGGGTTATTGGAATCGGTGGTTTTGGGAAGGTATACAAAGGAACCTTGAACGATGGAACTAAAGTGGCTGTCAAGAGGGGAAATCCACGGTCTCAACAGGGACTTGCAGAGTTCAGGACTGAAATTGAGATGCTATCTCAGTTCCGTCACCGCCATCTTGTCTCATTGATTGGGTATTGTGATGACAAGAATGAGATGATTCTGATATATGAATATATGGAGAACGGAACCCTGAAGGGTCATCTCTATGGCTTAGGTCACCCCAGCTTAAGTTGGAAACAAAGGCTTGAAATATGCATTGGATCTGCTAGAGGACTTCACTACCTTCACACTGGTTATGCAAAAGCAGTTATTCATCGTGATGTGAAATCCGCAAACATCTTGCTTGATGAGAACCTCATGGCCAAGGTTGCTGATTTTGGGCTTTCTAAGACGGGGCCTGAAATCGATCAAACCCATGTCAGTACGGCAGTTAAAGGAAGTTTTGGATACCTTGATCCTGAATATTTTAGAAGGCAACAACTGACAGAGAAATCAGATACCTGTTATAAAAGGGATCCGTCTCTTCCGAGGGAAATGGTGAACTTGGCTGAATGGGCAATGAAATGGCAGAAAAAGGGGCAGTTGGAGCAAATCATAGATTCAACTCTTGCAGGCAAAATCAGACCAGATTCTCTGAGGAAATTTGGAGAAACCGCCGAGAAATGCTTGGCTGACTACGGTGTTGACAGGCCCTCCATGGGAGATGTGTTGTGGAATCTAGAGTATGCCCTTCAACTTCAAGAGGCAGAAATTCCAGGCGACGCTGAAGAAAATAGTACCAATATGATTGGTGAGCTATCCCCACAAGTCAACAACTACAGTAACGTCGATACAAATGACTCTGCTGTGCAATTTGAAGTCTCGAGTGTGGATGATCGATCAGGTGTTTCTATGAGTAAAGTGTTCTCACAATGCTATGAGTTTAGCATCTCCTTTGATAGCACTTCTTTTGTGGCAGTTTTGTGTTTAAGATTCATAAGGGTTTTATGTAACTTGTTTATTTCTTATTCATATTGCACACCGTATGAAGCAAAAGTTCTGGTGGGAGATGGCTCTGTAGACCTTTCTCCTCACAGCCATCCATCCCGCGTGGTTCGTATGATCGGTGATTGTGAGAGGAAGGCTTATGCGTATCCCGCTTCAGACTTTTACCATATGAAAGCCGGGGGACCATCTGATGACCGCCACTGTAGTCTACTCTTTCGGAGGCCGAAAAGACTCACAGAGGCATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009506 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009826 GO:0009987 GO:0010033 GO:0014070 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0032502 GO:0032989 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0050896 GO:0055044 GO:0060560 GO:0071704 GO:0071840 GO:0071944 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

1018

Amino Acids

113.45

Weight (kDa)

6.29

Isoelectric Point (pI)

34.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009926)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46290 AT5G59700
fragaria_vesca	FvH4_3g34580
malus_domestica	MD03G1103600.v1.1 MD11G1117300.v1.1
prunus_persica	Prupe.6G087700_v2.0.a1 Prupe.6G087700_v2.0.a1 Prupe.6G087900_v2.0.a1
pyrus_communis	pycom03g08440 pycom11g09850
rosa_chinensis	RchiOBHm_Chr5g0062291
rosa_laevigata	RLG00000035547
rosa_multiflora	Rmu_ssc0000409.1_g000029
rosa_roxburghii	Rroxscaffold_1G00018430 Rroxscaffold_1G00018440
rosa_rugosa	Rorug05G0347400
rosa_samantha	Rh5AG408100 Rh5BG421900 Rh5CG445900 Rh5DG436900
rosa_wichuraiana	Rw5G038460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2325
AccB1I	GGYRCC	1 cut(s)	1529
AccB7I	CCANNNNNTGG	1 cut(s)	288
AccI	GTMKAC	3 cut(s)	1809, 2877, 3013
AccII	CGCG	2 cut(s)	550, 2907
AclWI	GGATC	9 cut(s)	409, 604, 617, 1160, 1173, 2086, 2267, 2327, 2340
AcoI	YGGCCR	1 cut(s)	2178
AcsI	RAATTY	7 cut(s)	275, 308, 734, 875, 1492, 2459, 2568
AcuI	CTGAAG	5 cut(s)	738, 1086, 2030, 2604, 2943
AfaI	GTAC	6 cut(s)	575, 970, 1235, 1288, 2242, 2596
AfiI	CCNNNNNNNGG	4 cut(s)	288, 864, 1539, 2516
AflII	CTTAAG	1 cut(s)	2044
AhdI	GACNNNNNGTC	1 cut(s)	1632
AjnI	CCWGG	4 cut(s)	879, 1148, 1168, 2572
AjuI	GAANNNNNNNTTGG	4 cut(s)	1170, 1202, 2058, 2090
Alw21I	GWGCWC	1 cut(s)	203
Alw26I	GTCTC	6 cut(s)	899, 1594, 1872, 1942, 2343, 2683
AlwI	GGATC	9 cut(s)	409, 604, 617, 1160, 1173, 2086, 2267, 2327, 2340
AlwNI	CAGNNNCTG	1 cut(s)	901
Ama87I	CYCGRG	2 cut(s)	1424, 2680
AoxI	GGCC	6 cut(s)	1375, 1615, 2178, 2213, 2507, 3026
ApeKI	GCWGC	5 cut(s)	1034, 1360, 1455, 1475, 1706
ApoI	RAATTY	7 cut(s)	275, 308, 734, 875, 1492, 2459, 2568
AseI	ATTAAT	1 cut(s)	1299
Asp700I	GAANNNNTTC	1 cut(s)	1657
AspLEI	GCGC	1 cut(s)	550
AspS9I	GGNCC	5 cut(s)	932, 1376, 2213, 2508, 2987
AsuC2I	CCSGG	2 cut(s)	560, 2983
AsuII	TTCGAA	2 cut(s)	1025, 1502
AvaI	CYCGRG	2 cut(s)	1424, 2680
AvaII	GGWCC	2 cut(s)	932, 2987
BaeI	ACNNNNGTAYC	2 cut(s)	521, 554
BalI	TGGCCA	1 cut(s)	2180
BamHI	GGATCC	3 cut(s)	609, 1165, 2332
BanI	GGYRCC	1 cut(s)	1529
BanII	GRGCYC	2 cut(s)	203, 1425
BarI	GAAGNNNNNNTAC	2 cut(s)	1363, 1395
BbsI	GAAGAC	1 cut(s)	1074
Bbv12I	GWGCWC	1 cut(s)	203
BbvI	GCAGC	5 cut(s)	1046, 1347, 1467, 1487, 1693
BccI	CCATC	8 cut(s)	42, 289, 1823, 1938, 2861, 2904, 2908, 2998
BceAI	ACGGC	1 cut(s)	2259
BciT130I	CCWGG	4 cut(s)	881, 1150, 1170, 2574
BciVI	GTATCC	3 cut(s)	41, 2258, 2961
BcnI	CCSGG	2 cut(s)	560, 2983
BcoDI	GTCTC	6 cut(s)	899, 1594, 1872, 1942, 2343, 2683
BfaI	CTAG	6 cut(s)	38, 440, 995, 1701, 2085, 2537
BfmI	CTRYAG	6 cut(s)	417, 813, 1717, 2635, 2874, 3007
BfrI	CTTAAG	1 cut(s)	2044
BfuI	GTATCC	3 cut(s)	41, 2258, 2961
BglII	AGATCT	2 cut(s)	208, 1273
BisI	GCNGC	5 cut(s)	1035, 1361, 1456, 1476, 1707
BlsI	GCNGC	5 cut(s)	1036, 1362, 1457, 1477, 1708
BmcAI	AGTACT	1 cut(s)	1288
Bme1390I	CCNGG	6 cut(s)	560, 881, 1150, 1170, 2574, 2983
Bme18I	GGWCC	2 cut(s)	932, 2987
BmeRI	GACNNNNNGTC	1 cut(s)	1632
BmeT110I	CYCGRG	2 cut(s)	1424, 2680
BmgT120I	GGNCC	5 cut(s)	932, 1376, 2213, 2508, 2987
BmrFI	CCNGG	6 cut(s)	560, 881, 1150, 1170, 2574, 2983
BmsI	GCATC	5 cut(s)	55, 191, 844, 1896, 2754
BpiI	GAAGAC	1 cut(s)	1074
BplI	GAGNNNNNCTC	2 cut(s)	1097, 1129
BpmI	CTGGAG	2 cut(s)	923, 1254
Bpu10I	CCTNAGC	1 cut(s)	2029
Bpu14I	TTCGAA	2 cut(s)	1025, 1502
BpuMI	CCSGG	2 cut(s)	560, 2983
Bsa29I	ATCGAT	2 cut(s)	2223, 2695
BsaBI	GATNNNNATC	1 cut(s)	1278
BsaI	GGTCTC	1 cut(s)	1872
BsaJI	CCNNGG	8 cut(s)	880, 1149, 1668, 1862, 2181, 2345, 2514, 2982
BsaXI	ACNNNNNCTCC	4 cut(s)	1509, 1539, 2495, 2525
Bsc4I	CCNNNNNNNGG	4 cut(s)	288, 864, 1539, 2516
Bse1I	ACTGG	2 cut(s)	1608, 2113
Bse3DI	GCAATG	3 cut(s)	1029, 1071, 2382
Bse8I	GATNNNNATC	1 cut(s)	1278
BseBI	CCWGG	4 cut(s)	881, 1150, 1170, 2574
BseCI	ATCGAT	2 cut(s)	2223, 2695
BseDI	CCNNGG	8 cut(s)	880, 1149, 1668, 1862, 2181, 2345, 2514, 2982
BseGI	GGATG	5 cut(s)	297, 470, 2695, 2896, 2900
BseJI	GATNNNNATC	1 cut(s)	1278
BseLI	CCNNNNNNNGG	4 cut(s)	288, 864, 1539, 2516
BseMI	GCAATG	3 cut(s)	1029, 1071, 2382
BseMII	CTCAG	8 cut(s)	216, 644, 1095, 1274, 1461, 1474, 1928, 2444
BseNI	ACTGG	2 cut(s)	1608, 2113
BseRI	GAGGAG	1 cut(s)	2877
BseXI	GCAGC	5 cut(s)	1046, 1347, 1467, 1487, 1693
BseYI	CCCAGC	3 cut(s)	1565, 1776, 2039
BsgI	GTGCAG	2 cut(s)	1606, 1766
Bsh1236I	CGCG	2 cut(s)	550, 2907
BshFI	GGCC	6 cut(s)	1377, 1617, 2180, 2215, 2509, 3028
BshNI	GGYRCC	1 cut(s)	1529
BshVI	ATCGAT	2 cut(s)	2223, 2695
BsiHKAI	GWGCWC	1 cut(s)	203
BsiHKCI	CYCGRG	2 cut(s)	1424, 2680
BsiSI	CCGG	2 cut(s)	560, 2982
BslFI	GGGAC	5 cut(s)	815, 1620, 1705, 1890, 3000
BslI	CCNNNNNNNGG	4 cut(s)	288, 864, 1539, 2516
BsmAI	GTCTC	6 cut(s)	899, 1594, 1872, 1942, 2343, 2683
BsmBI	CGTCTC	1 cut(s)	2343
BsmFI	GGGAC	5 cut(s)	815, 1620, 1705, 1890, 3000
BsmI	GAATGC	1 cut(s)	800
BsnI	GGCC	6 cut(s)	1377, 1617, 2180, 2215, 2509, 3028
Bso31I	GGTCTC	1 cut(s)	1872
BsoBI	CYCGRG	2 cut(s)	1424, 2680
Bsp119I	TTCGAA	2 cut(s)	1025, 1502
Bsp1286I	GDGCHC	2 cut(s)	203, 1425
Bsp19I	CCATGG	2 cut(s)	1668, 2514
BspANI	GGCC	6 cut(s)	1377, 1617, 2180, 2215, 2509, 3028
BspCNI	CTCAG	8 cut(s)	215, 645, 1096, 1275, 1460, 1473, 1927, 2445
BspDI	ATCGAT	2 cut(s)	2223, 2695
BspFNI	CGCG	2 cut(s)	550, 2907
BspMAI	CTGCAG	1 cut(s)	421
BspPI	GGATC	9 cut(s)	409, 604, 617, 1160, 1173, 2086, 2267, 2327, 2340
BspT104I	TTCGAA	2 cut(s)	1025, 1502
BspT107I	GGYRCC	1 cut(s)	1529
BspTI	CTTAAG	1 cut(s)	2044
BspTNI	GGTCTC	1 cut(s)	1872
BsrDI	GCAATG	3 cut(s)	1029, 1071, 2382
BsrI	ACTGG	2 cut(s)	1608, 2113
BssECI	CCNNGG	8 cut(s)	880, 1149, 1668, 1862, 2181, 2345, 2514, 2982
BssNAI	GTATAC	1 cut(s)	1810
BssT1I	CCWWGG	3 cut(s)	1668, 2181, 2514
Bst1107I	GTATAC	1 cut(s)	1810
Bst2UI	CCWGG	4 cut(s)	881, 1150, 1170, 2574
Bst6I	CTCTTC	3 cut(s)	1261, 1592, 2346
BstAFI	CTTAAG	1 cut(s)	2044
BstBI	TTCGAA	2 cut(s)	1025, 1502
BstC8I	GCNNGC	4 cut(s)	859, 1453, 1534, 2431
BstDSI	CCRYGG	3 cut(s)	1668, 1862, 2514
BstEII	GGTNACC	1 cut(s)	2033
BstF5I	GGATG	5 cut(s)	297, 470, 2695, 2896, 2900
BstFNI	CGCG	2 cut(s)	550, 2907
BstHHI	GCGC	1 cut(s)	550
BstMAI	GTCTC	6 cut(s)	899, 1594, 1872, 1942, 2343, 2683
BstMWI	GCNNNNNNNGC	7 cut(s)	80, 416, 1706, 2186, 2372, 2404, 2954
BstNI	CCWGG	4 cut(s)	881, 1150, 1170, 2574
BstPI	GGTNACC	1 cut(s)	2033
BstSCI	CCNGG	6 cut(s)	558, 879, 1148, 1168, 2572, 2981
BstSFI	CTRYAG	6 cut(s)	417, 813, 1717, 2635, 2874, 3007
BstUI	CGCG	2 cut(s)	550, 2907
BstV1I	GCAGC	5 cut(s)	1046, 1347, 1467, 1487, 1693
BstV2I	GAAGAC	1 cut(s)	1074
BstX2I	RGATCY	6 cut(s)	208, 609, 1165, 1273, 2078, 2332
BstYI	RGATCY	6 cut(s)	208, 609, 1165, 1273, 2078, 2332
BstZ17I	GTATAC	1 cut(s)	1810
Bsu15I	ATCGAT	2 cut(s)	2223, 2695
BsuI	GTATCC	3 cut(s)	41, 2258, 2961
BsuRI	GGCC	6 cut(s)	1377, 1617, 2180, 2215, 2509, 3028
BsuTUI	ATCGAT	2 cut(s)	2223, 2695
BtgI	CCRYGG	3 cut(s)	1668, 1862, 2514
BtsCI	GGATG	5 cut(s)	297, 470, 2695, 2896, 2900
BtsI	GCAGTG	2 cut(s)	426, 1560
BtsIMutI	CAGTG	9 cut(s)	426, 715, 846, 1167, 1329, 1468, 1560, 2106, 3004
Cac8I	GCNNGC	4 cut(s)	859, 1453, 1534, 2431
CaiI	CAGNNNCTG	1 cut(s)	901
CfoI	GCGC	1 cut(s)	550
Cfr13I	GGNCC	5 cut(s)	932, 1376, 2213, 2508, 2987
ClaI	ATCGAT	2 cut(s)	2223, 2695
CseI	GACGC	2 cut(s)	1329, 2588
Csp6I	GTAC	6 cut(s)	574, 969, 1234, 1287, 2241, 2595
CviAII	CATG	5 cut(s)	1645, 1669, 2176, 2234, 2515
CviQI	GTAC	6 cut(s)	574, 969, 1234, 1287, 2241, 2595
DraI	TTTAAA	1 cut(s)	307
DriI	GACNNNNNGTC	1 cut(s)	1632
EaeI	YGGCCR	1 cut(s)	2178
Eam1104I	CTCTTC	3 cut(s)	1261, 1592, 2346
Eam1105I	GACNNNNNGTC	1 cut(s)	1632
EarI	CTCTTC	3 cut(s)	1261, 1592, 2346
EciI	GGCGGA	2 cut(s)	602, 667
Ecl136II	GAGCTC	1 cut(s)	201
Eco130I	CCWWGG	3 cut(s)	1668, 2181, 2514
Eco24I	GRGCYC	2 cut(s)	203, 1425
Eco31I	GGTCTC	1 cut(s)	1872
Eco47I	GGWCC	2 cut(s)	932, 2987
Eco53kI	GAGCTC	1 cut(s)	201
Eco57I	CTGAAG	5 cut(s)	738, 1086, 2030, 2604, 2943
Eco88I	CYCGRG	2 cut(s)	1424, 2680
Eco91I	GGTNACC	1 cut(s)	2033
EcoICRI	GAGCTC	1 cut(s)	201
EcoO109I	RGGNCCY	2 cut(s)	2213, 2508
EcoO65I	GGTNACC	1 cut(s)	2033
EcoRI	GAATTC	1 cut(s)	1492
EcoRII	CCWGG	4 cut(s)	879, 1148, 1168, 2572
EcoT14I	CCWWGG	3 cut(s)	1668, 2181, 2514
EcoT22I	ATGCAT	1 cut(s)	2075
EcoT38I	GRGCYC	2 cut(s)	203, 1425
ErhI	CCWWGG	3 cut(s)	1668, 2181, 2514
Esp3I	CGTCTC	1 cut(s)	2343
FaeI	CATG	5 cut(s)	1648, 1672, 2179, 2237, 2518
FalI	AAGNNNNNCTT	4 cut(s)	563, 595, 928, 960
FaqI	GGGAC	5 cut(s)	815, 1620, 1705, 1890, 3000
FatI	CATG	5 cut(s)	1644, 1668, 2175, 2233, 2514
FauI	CCCGC	2 cut(s)	2912, 2962
FauNDI	CATATG	2 cut(s)	1687, 2973
FblI	GTMKAC	3 cut(s)	1809, 2877, 3013
Fnu4HI	GCNGC	5 cut(s)	1035, 1361, 1456, 1476, 1707
FokI	GGATG	5 cut(s)	304, 457, 2702, 2883, 2887
FriOI	GRGCYC	2 cut(s)	203, 1425
Fsp4HI	GCNGC	5 cut(s)	1035, 1361, 1456, 1476, 1707
FspBI	CTAG	6 cut(s)	38, 440, 995, 1701, 2085, 2537
GlaI	GCGC	1 cut(s)	549
GluI	GCNGC	5 cut(s)	1035, 1361, 1456, 1476, 1707
GsaI	CCCAGC	3 cut(s)	1569, 1780, 2043
GsuI	CTGGAG	2 cut(s)	923, 1254
HaeIII	GGCC	6 cut(s)	1377, 1617, 2180, 2215, 2509, 3028
HapII	CCGG	2 cut(s)	560, 2982
HgaI	GACGC	2 cut(s)	1329, 2588
HhaI	GCGC	1 cut(s)	550
Hin1II	CATG	5 cut(s)	1648, 1672, 2179, 2237, 2518
Hin6I	GCGC	1 cut(s)	548
HinP1I	GCGC	1 cut(s)	548
HincII	GTYRAC	3 cut(s)	1252, 2503, 2629
HindII	GTYRAC	3 cut(s)	1252, 2503, 2629
HpaII	CCGG	2 cut(s)	560, 2982
Hpy99I	CGWCG	2 cut(s)	2582, 2648
HpyAV	CCTTC	9 cut(s)	784, 1389, 1587, 1798, 2005, 2111, 2283, 2558, 2932
HpyCH4IV	ACGT	3 cut(s)	483, 747, 2643
HpyF10VI	GCNNNNNNNGC	7 cut(s)	80, 416, 1706, 2186, 2372, 2404, 2954
HpySE526I	ACGT	3 cut(s)	483, 747, 2643
Hsp92II	CATG	5 cut(s)	1648, 1672, 2179, 2237, 2518
HspAI	GCGC	1 cut(s)	548
LmnI	GCTCC	4 cut(s)	198, 1081, 1273, 2404
Lsp1109I	GCAGC	5 cut(s)	1046, 1347, 1467, 1487, 1693
LweI	GCATC	5 cut(s)	55, 191, 844, 1896, 2754
MaeI	CTAG	6 cut(s)	38, 440, 995, 1701, 2085, 2537
MaeII	ACGT	3 cut(s)	483, 747, 2643
MboII	GAAGA	9 cut(s)	93, 547, 1079, 1248, 1476, 1602, 1609, 2333, 2597
MflI	RGATCY	6 cut(s)	208, 609, 1165, 1273, 2078, 2332
MhlI	GDGCHC	2 cut(s)	203, 1425
MlsI	TGGCCA	1 cut(s)	2180
MluNI	TGGCCA	1 cut(s)	2180
MlyI	GAGTC	4 cut(s)	1247, 1642, 2651, 3030
MmeI	TCCRAC	2 cut(s)	2030, 2382
Mox20I	TGGCCA	1 cut(s)	2180
Mph1103I	ATGCAT	1 cut(s)	2075
MroXI	GAANNNNTTC	1 cut(s)	1657
MscI	TGGCCA	1 cut(s)	2180
MseI	TTAA	7 cut(s)	306, 729, 1041, 1299, 2045, 2250, 2786
MslI	CAYNNNNRTG	2 cut(s)	2022, 2136
Msp20I	TGGCCA	1 cut(s)	2180
MspA1I	CMGCKG	3 cut(s)	535, 1037, 1231
MspCI	CTTAAG	1 cut(s)	2044
MspI	CCGG	2 cut(s)	560, 2982
MspR9I	CCNGG	6 cut(s)	560, 881, 1150, 1170, 2574, 2983
Mva1269I	GAATGC	1 cut(s)	800
MvaI	CCWGG	4 cut(s)	881, 1150, 1170, 2574
MvnI	CGCG	2 cut(s)	550, 2907
MwoI	GCNNNNNNNGC	7 cut(s)	80, 416, 1706, 2186, 2372, 2404, 2954
NciI	CCSGG	2 cut(s)	560, 2983
NcoI	CCATGG	2 cut(s)	1668, 2514
NdeI	CATATG	2 cut(s)	1687, 2973
NlaIII	CATG	5 cut(s)	1648, 1672, 2179, 2237, 2518
NmeAIII	GCCGAG	2 cut(s)	1094, 2500
NmuCI	GTSAC	4 cut(s)	218, 748, 1922, 2033
NsiI	ATGCAT	1 cut(s)	2075
NspV	TTCGAA	2 cut(s)	1025, 1502
PaeR7I	CTCGAG	2 cut(s)	1424, 2680
PctI	GAATGC	1 cut(s)	800
PdmI	GAANNNNTTC	1 cut(s)	1657
PflMI	CCANNNNNTGG	1 cut(s)	288
PfoI	TCCNGGA	2 cut(s)	558, 1168
PkrI	GCNGC	5 cut(s)	1036, 1362, 1457, 1477, 1708
PleI	GAGTC	4 cut(s)	1247, 1641, 2651, 3030
PpsI	GAGTC	4 cut(s)	1247, 1641, 2651, 3030
PshBI	ATTAAT	1 cut(s)	1299
PsiI	TTATAA	1 cut(s)	2325
Psp124BI	GAGCTC	1 cut(s)	203
Psp6I	CCWGG	4 cut(s)	879, 1148, 1168, 2572
PspEI	GGTNACC	1 cut(s)	2033
PspFI	CCCAGC	3 cut(s)	1565, 1776, 2039
PspGI	CCWGG	4 cut(s)	879, 1148, 1168, 2572
PspPI	GGNCC	5 cut(s)	932, 1376, 2213, 2508, 2987
PstI	CTGCAG	1 cut(s)	421
PstNI	CAGNNNCTG	1 cut(s)	901
PsuI	RGATCY	6 cut(s)	208, 609, 1165, 1273, 2078, 2332
PvuII	CAGCTG	2 cut(s)	1037, 1231
RsaI	GTAC	6 cut(s)	575, 970, 1235, 1288, 2242, 2596
RsaNI	GTAC	6 cut(s)	574, 969, 1234, 1287, 2241, 2595
RseI	CAYNNNNRTG	2 cut(s)	2022, 2136
SacI	GAGCTC	1 cut(s)	203
SaqAI	TTAA	7 cut(s)	306, 729, 1041, 1299, 2045, 2250, 2786
SatI	GCNGC	5 cut(s)	1035, 1361, 1456, 1476, 1707
Sau96I	GGNCC	5 cut(s)	932, 1376, 2213, 2508, 2987
ScaI	AGTACT	1 cut(s)	1288
SchI	GAGTC	4 cut(s)	1247, 1642, 2651, 3030
ScrFI	CCNGG	6 cut(s)	560, 881, 1150, 1170, 2574, 2983
SduI	GDGCHC	2 cut(s)	203, 1425
SfaNI	GCATC	5 cut(s)	55, 191, 844, 1896, 2754
SfcI	CTRYAG	6 cut(s)	417, 813, 1717, 2635, 2874, 3007
Sfr274I	CTCGAG	2 cut(s)	1424, 2680
SfuI	TTCGAA	2 cut(s)	1025, 1502
SinI	GGWCC	2 cut(s)	932, 2987
SlaI	CTCGAG	2 cut(s)	1424, 2680
SmiMI	CAYNNNNRTG	2 cut(s)	2022, 2136
SmlI	CTYRAG	3 cut(s)	1424, 2044, 2680
SmoI	CTYRAG	3 cut(s)	1424, 2044, 2680
SspI	AATATT	1 cut(s)	2282
SspMI	CTAG	6 cut(s)	38, 440, 995, 1701, 2085, 2537
SstI	GAGCTC	1 cut(s)	203
StyD4I	CCNGG	6 cut(s)	558, 879, 1148, 1168, 2572, 2981
StyI	CCWWGG	3 cut(s)	1668, 2181, 2514
TaiI	ACGT	3 cut(s)	486, 750, 2646
TaqI	TCGA	8 cut(s)	1025, 1189, 1425, 1502, 2223, 2646, 2681, 2695
TatI	WGTACW	3 cut(s)	573, 1233, 1286
Tru1I	TTAA	7 cut(s)	306, 729, 1041, 1299, 2045, 2250, 2786
Tru9I	TTAA	7 cut(s)	306, 729, 1041, 1299, 2045, 2250, 2786
TscAI	CASTG	9 cut(s)	426, 715, 853, 1167, 1336, 1468, 1560, 2113, 3011
TseFI	GTSAC	4 cut(s)	218, 748, 1922, 2033
TseI	GCWGC	5 cut(s)	1034, 1360, 1455, 1475, 1706
Tsp45I	GTSAC	4 cut(s)	218, 748, 1922, 2033
TspGWI	ACGGA	4 cut(s)	618, 1910, 2016, 2325
TspRI	CASTG	9 cut(s)	426, 715, 853, 1167, 1336, 1468, 1560, 2113, 3011
Van91I	CCANNNNNTGG	1 cut(s)	288
Vha464I	CTTAAG	1 cut(s)	2044
VpaK11BI	GGWCC	2 cut(s)	932, 2987
VspI	ATTAAT	1 cut(s)	1299
XapI	RAATTY	7 cut(s)	275, 308, 734, 875, 1492, 2459, 2568
XbaI	TCTAGA	1 cut(s)	2536
XhoI	CTCGAG	2 cut(s)	1424, 2680
XmiI	GTMKAC	3 cut(s)	1809, 2877, 3013
XmnI	GAANNNNTTC	1 cut(s)	1657
XspI	CTAG	6 cut(s)	38, 440, 995, 1701, 2085, 2537
ZrmI	AGTACT	1 cut(s)	1288
Zsp2I	ATGCAT	1 cut(s)	2075

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.