Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0009926

Physical Location & Seq

Genomic Coordinates Reverse (-)

8868046 .. 8870544

Gene Structure 2499 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1103600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2499 bp

ATGATGGGTTGTTTTAAATTTGATCTGTTCATTTGGGTTTTATCCCTATTGTGTTTGGGATTGTTGTGTAGTGGATTTGTTCCTGCTGACAATTACCTTATAGACTGTGGATCACTTGCCAATACTACAGTGGGTAACCGTGTTTTTCTAGCTGATAACTTGGCTTCCAAATATCTTTCATCCCCAAAAGACGTTGTTGCCAATGTTTCTTTGAAACCAATCACTTCCTTTGATGATTCGCCGCTGTATCAGACAGCACGAATCTTCCCCGAATCCTCTAAGTACACCTTTTCCATAAGCCATAGCGGTAGGCATTGGATCCGCCTTTACTTCTATCCGTTTGTTTTCGGTAGTTATGATCTGAGCAAGGCGAAGTTCTCCATTTCCGCCCAAAACTTTGCCCTCCTTACTGATTTCAGTGTTCAAAACACTACTCTTAAAGAATTTTCGGTGAACGTGACTTCAGATAGCCTTGTTATCACCTTCACCCCTTCCAGCAACTCGTTTGCATTCCTAAATGCTATAGAAGTTGTTTCAGTCCCCGACCAACTCATCACTGATGATGTCAGCTCTGGGTCAGAGAAATTCCAGGGTTTGATGAATCAGGCTCTGGAGACAGCTTGGAGGGTGAATATGGGTGGACCAATAGTGTCTTTTGAGAATGATACCCTGTGGCGAACTTGGGTTCCTGACCAAAGTTTTCTAGTAAATGAGAACCTTGCAAAAGATTTTTCGAACATTGCTGCTGTTAAGTATGATGTTGGTTTGGCAACTGAAGACATTGCTCCACAAACTGTCTATGGAACCCTTACTGAGATGAACTCGGCAGATAATCCAAACAGCAATTTCAATGTTACCTGGGAGTTCACGGTGGATCCAGGATTCCAATACCTTGTTCGATTTCACTTTTGCGATGTAGTAAGTAAATCTCTCAATCAGCTGTACTTCAATGTTTATGTTGACTCTTCCAATGTTGCTCCAGATCTTGATCTGAGTACTATGACAATTAATAAGTTGGCTGTGCCATATTATCTGGACATTGTTACAGCGTCCATTGTCAGAAATAAGCTGCGTATTAGTATTGGCCCTTCTGCTGTAAACAATGCTTATCCCAATGCCATTCTAAATGGGCTCGAGATTATGAAAATGAACAACTCAGCAGGCAGCCTCAGTGGAACAAACTCAGTTTCTTTTTCGAATTCAAGTTCGAAAAGTAACGTTGGAGTAATTGTGGGTGCCAGCGTTGGGTCATTTATTGCAGTGGCATTGGCTGGGGTTCTCTTTGTTCTGTGCAGAAGAAGGAAGAGACTGGCAGACCAAGGCCATTCAAAGACTTGGAGTCCCTTTTCCATGAATGGAACCAATTCTCACACCATGGGAAGTAAATACTCATATGGGACAACTGCTAGTGCTGCTTCTAACTATAGTTATCGTTTTCCTTTTGGGGTAGTACAGGAGGCTACGAATAACTTTGATGAGAGCTGGGTTATTGGAATCGGTGGTTTTGGGAAGGTATACAAGGGAACCTTGAACGATGGAACTAAAGTGGCTGTCAAGAGGGGAAATCCACGGTCTCAACAGGGACTTGCAGAGTTCAGGACTGAAATTGAGATGCTATCTCAGTTCCGTCACCGCCATCTTGTCTCATTGATTGGGTATTGTGATGACAAGAATGAGATGATTCTGATATATGAATATATGGAGAACGGAACCCTGAAGGGTCATCTCTATGGCTCAGGTCACCCCAGCTTAAGTTGGAAACAAAGGCTTGAAATATGCATTGGATCTGCTAGAGGACTTCACTACCTTCACACTGGTTATGCAAAAGCAGTTATCCATCGTGATGTGAAATCCGCAAACATCTTGCTTGATGAGAACCTCATGGCCAAGGTTGCTGATTTTGGGCTTTCTAAGACGGGGCCTGAAATCGATCAAACCCATGTCAGTACAGCAGTTAAAGGGAGTTTTGGATACCTTGATCCTGAATATTTTAGAAGGCAACAACTGACAGAGAAATCAGATGTGTATTCATTTGGGGTGGTTTTGTTTGAGGTTCTTTGTGCAAGACCTGTTATAGATCCGTCTCTTCCGAGGGAAATGGTGAACTTGGCTGAATGGGCAATGAAATGGCAGAAGAAGGGGCAGTTGGAGCAAATCATAGATTCAACTCTTGCAGGCAAAATCAGACCAGATTCTCTGAGGAAATTTGGAGAAACCGCCGAGAAATGCTTGGCTGACTATGGTGTTGACAGGCCCTCCATGGGAGATGTGTTGTGGAATCTAGAGTATGCCCTTCAACTCCAAGAGACAGAAATTCCAGGCGACGCTGAAGAAAATAGTACCAATATGATTGGGGAGCTATCCCCACAAATCAACAACTACAGTAACGTCGATACAAATGACTCTGCTGTGCAATTTGAAGTCTCGAGTGTGGATGATCTTTCAGGTGTTTCTATGAGTAAAGTGTTCTCACAGCTGGTGAAGTCCGAGGGTAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009506 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009826 GO:0009987 GO:0010033 GO:0014070 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0032502 GO:0032989 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0050896 GO:0055044 GO:0060560 GO:0071704 GO:0071840 GO:0071944 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

833

Amino Acids

91.97

Weight (kDa)

5.47

Isoelectric Point (pI)

30.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin	PF11721	32 - 155	3.4e-06	Malectin domain
Malectin_like	PF12819	34 - 382	9.4e-30	Malectin-like domain
PK_Tyr_Ser-Thr	PF07714	496 - 690	1.5e-47	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	496 - 702	5.7e-43	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009926)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46290 AT5G59700
fragaria_vesca	FvH4_3g34580
malus_domestica	MD03G1103600.v1.1 MD11G1117300.v1.1
prunus_persica	Prupe.6G087700_v2.0.a1 Prupe.6G087700_v2.0.a1 Prupe.6G087900_v2.0.a1
pyrus_communis	pycom03g08440 pycom11g09850
rosa_chinensis	RchiOBHm_Chr5g0062291
rosa_laevigata	RLG00000035547
rosa_multiflora	Rmu_ssc0000409.1_g000029
rosa_roxburghii	Rroxscaffold_1G00018430 Rroxscaffold_1G00018440
rosa_rugosa	Rorug05G0347400
rosa_samantha	Rh5AG408100 Rh5BG421900 Rh5CG445900 Rh5DG436900
rosa_wichuraiana	Rw5G038460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1235
AccI	GTMKAC	1 cut(s)	1515
AciI	CCGC	7 cut(s)	242, 306, 322, 387, 1633, 1854, 2217
AclI	AACGTT	1 cut(s)	1218
AclWI	GGATC	8 cut(s)	118, 313, 326, 869, 882, 1792, 1973, 2072
AcoI	YGGCCR	1 cut(s)	1884
AcsI	RAATTY	6 cut(s)	17, 443, 584, 1198, 2204, 2313
AcuI	CTGAAG	4 cut(s)	447, 795, 1736, 2349
AfaI	GTAC	6 cut(s)	284, 944, 997, 1452, 1948, 2341
AfiI	CCNNNNNNNGG	3 cut(s)	1245, 2261, 2493
AflII	CTTAAG	1 cut(s)	1750
AhdI	GACNNNNNGTC	1 cut(s)	1338
AjnI	CCWGG	4 cut(s)	588, 857, 877, 2317
AjuI	GAANNNNNNNTTGG	6 cut(s)	879, 911, 1764, 1796, 2129, 2161
AloI	GAACNNNNNNTCC	2 cut(s)	670, 702
AluBI	AGCT	9 cut(s)	152, 570, 620, 940, 1069, 1482, 1749, 2359, 2476
AluI	AGCT	9 cut(s)	152, 570, 620, 940, 1069, 1482, 1749, 2359, 2476
Alw26I	GTCTC	7 cut(s)	608, 1300, 1578, 1648, 2088, 2300, 2428
AlwI	GGATC	8 cut(s)	118, 313, 326, 869, 882, 1792, 1973, 2072
AlwNI	CAGNNNCTG	1 cut(s)	610
Ama87I	CYCGRG	2 cut(s)	1133, 2425
AoxI	GGCC	5 cut(s)	1084, 1321, 1884, 1919, 2252
ApeKI	GCWGC	4 cut(s)	743, 1069, 1164, 1412
ApoI	RAATTY	6 cut(s)	17, 443, 584, 1198, 2204, 2313
AseI	ATTAAT	1 cut(s)	1008
Asp700I	GAANNNNTTC	1 cut(s)	1363
AspS9I	GGNCC	4 cut(s)	641, 1085, 1919, 2253
AsuHPI	GGTGA	8 cut(s)	463, 472, 478, 640, 1622, 1733, 2113, 2491
AsuII	TTCGAA	3 cut(s)	734, 1196, 1208
AvaI	CYCGRG	2 cut(s)	1133, 2425
AvaII	GGWCC	1 cut(s)	641
BalI	TGGCCA	1 cut(s)	1886
BamHI	GGATCC	2 cut(s)	318, 874
BanI	GGYRCC	1 cut(s)	1235
BanII	GRGCYC	1 cut(s)	1134
BarI	GAAGNNNNNNTAC	2 cut(s)	1072, 1104
BbsI	GAAGAC	1 cut(s)	783
BbvI	GCAGC	4 cut(s)	730, 1056, 1176, 1399
BccI	CCATC	3 cut(s)	1529, 1644, 1845
BciT130I	CCWGG	4 cut(s)	590, 859, 879, 2319
BciVI	GTATCC	1 cut(s)	1964
BcoDI	GTCTC	7 cut(s)	608, 1300, 1578, 1648, 2088, 2300, 2428
BfaI	CTAG	5 cut(s)	149, 704, 1407, 1791, 2282
BfmI	CTRYAG	4 cut(s)	126, 522, 1423, 2380
BfrI	CTTAAG	1 cut(s)	1750
BfuI	GTATCC	1 cut(s)	1964
BglII	AGATCT	1 cut(s)	982
BisI	GCNGC	5 cut(s)	242, 744, 1070, 1165, 1413
BlsI	GCNGC	5 cut(s)	243, 745, 1071, 1166, 1414
BmcAI	AGTACT	1 cut(s)	997
Bme1390I	CCNGG	4 cut(s)	590, 859, 879, 2319
Bme18I	GGWCC	1 cut(s)	641
BmeRI	GACNNNNNGTC	1 cut(s)	1338
BmeT110I	CYCGRG	2 cut(s)	1133, 2425
BmgT120I	GGNCC	4 cut(s)	641, 1085, 1919, 2253
BmiI	GGNNCC	9 cut(s)	320, 687, 805, 876, 1237, 1360, 1525, 1711, 1920
BmrFI	CCNGG	4 cut(s)	590, 859, 879, 2319
BmsI	GCATC	1 cut(s)	1602
BpiI	GAAGAC	1 cut(s)	783
BplI	GAGNNNNNCTC	2 cut(s)	806, 838
BpmI	CTGGAG	2 cut(s)	632, 963
Bpu10I	CCTNAGC	1 cut(s)	1735
Bpu14I	TTCGAA	3 cut(s)	734, 1196, 1208
Bsa29I	ATCGAT	1 cut(s)	1929
BsaBI	GATNNNNATC	1 cut(s)	987
BsaI	GGTCTC	1 cut(s)	1578
BsaJI	CCNNGG	9 cut(s)	589, 858, 1318, 1374, 1568, 1887, 2090, 2259, 2487
BsaXI	ACNNNNNCTCC	4 cut(s)	1215, 1245, 2240, 2270
Bsc4I	CCNNNNNNNGG	3 cut(s)	1245, 2261, 2493
Bse1I	ACTGG	2 cut(s)	1314, 1819
Bse3DI	GCAATG	3 cut(s)	738, 780, 2127
Bse8I	GATNNNNATC	1 cut(s)	987
BseBI	CCWGG	4 cut(s)	590, 859, 879, 2319
BseCI	ATCGAT	1 cut(s)	1929
BseDI	CCNNGG	9 cut(s)	589, 858, 1318, 1374, 1568, 1887, 2090, 2259, 2487
BseGI	GGATG	2 cut(s)	179, 2440
BseJI	GATNNNNATC	1 cut(s)	987
BseLI	CCNNNNNNNGG	3 cut(s)	1245, 2261, 2493
BseMI	GCAATG	3 cut(s)	738, 780, 2127
BseMII	CTCAG	9 cut(s)	353, 804, 983, 1170, 1183, 1197, 1634, 1749, 2189
BseNI	ACTGG	2 cut(s)	1314, 1819
BseXI	GCAGC	4 cut(s)	730, 1056, 1176, 1399
BseYI	CCCAGC	3 cut(s)	1271, 1482, 1745
BsgI	GTGCAG	1 cut(s)	1312
BshFI	GGCC	5 cut(s)	1086, 1323, 1886, 1921, 2254
BshNI	GGYRCC	1 cut(s)	1235
BshVI	ATCGAT	1 cut(s)	1929
BsiHKCI	CYCGRG	2 cut(s)	1133, 2425
BslFI	GGGAC	4 cut(s)	524, 1326, 1411, 1596
BslI	CCNNNNNNNGG	3 cut(s)	1245, 2261, 2493
BsmAI	GTCTC	7 cut(s)	608, 1300, 1578, 1648, 2088, 2300, 2428
BsmBI	CGTCTC	1 cut(s)	2088
BsmFI	GGGAC	4 cut(s)	524, 1326, 1411, 1596
BsmI	GAATGC	1 cut(s)	509
BsnI	GGCC	5 cut(s)	1086, 1323, 1886, 1921, 2254
Bso31I	GGTCTC	1 cut(s)	1578
BsoBI	CYCGRG	2 cut(s)	1133, 2425
Bsp119I	TTCGAA	3 cut(s)	734, 1196, 1208
Bsp1286I	GDGCHC	1 cut(s)	1134
Bsp19I	CCATGG	2 cut(s)	1374, 2259
BspACI	CCGC	7 cut(s)	242, 306, 322, 387, 1633, 1854, 2217
BspANI	GGCC	5 cut(s)	1086, 1323, 1886, 1921, 2254
BspCNI	CTCAG	9 cut(s)	354, 805, 984, 1169, 1182, 1196, 1633, 1748, 2190
BspDI	ATCGAT	1 cut(s)	1929
BspLI	GGNNCC	9 cut(s)	320, 687, 805, 876, 1237, 1360, 1525, 1711, 1920
BspPI	GGATC	8 cut(s)	118, 313, 326, 869, 882, 1792, 1973, 2072
BspT104I	TTCGAA	3 cut(s)	734, 1196, 1208
BspT107I	GGYRCC	1 cut(s)	1235
BspTI	CTTAAG	1 cut(s)	1750
BspTNI	GGTCTC	1 cut(s)	1578
BsrDI	GCAATG	3 cut(s)	738, 780, 2127
BsrI	ACTGG	2 cut(s)	1314, 1819
BssECI	CCNNGG	9 cut(s)	589, 858, 1318, 1374, 1568, 1887, 2090, 2259, 2487
BssNAI	GTATAC	1 cut(s)	1516
BssT1I	CCWWGG	4 cut(s)	1318, 1374, 1887, 2259
Bst1107I	GTATAC	1 cut(s)	1516
Bst2UI	CCWGG	4 cut(s)	590, 859, 879, 2319
Bst4CI	ACNGT	7 cut(s)	107, 130, 140, 796, 871, 1572, 2384
Bst6I	CTCTTC	3 cut(s)	970, 1298, 2091
BstAFI	CTTAAG	1 cut(s)	1750
BstBI	TTCGAA	3 cut(s)	734, 1196, 1208
BstC8I	GCNNGC	3 cut(s)	1162, 1240, 2176
BstDSI	CCRYGG	3 cut(s)	1374, 1568, 2259
BstEII	GGTNACC	2 cut(s)	134, 1739
BstF5I	GGATG	2 cut(s)	179, 2440
BstMAI	GTCTC	7 cut(s)	608, 1300, 1578, 1648, 2088, 2300, 2428
BstMWI	GCNNNNNNNGC	4 cut(s)	1412, 1892, 2117, 2149
BstNI	CCWGG	4 cut(s)	590, 859, 879, 2319
BstPI	GGTNACC	2 cut(s)	134, 1739
BstSCI	CCNGG	4 cut(s)	588, 857, 877, 2317
BstSFI	CTRYAG	4 cut(s)	126, 522, 1423, 2380
BstV1I	GCAGC	4 cut(s)	730, 1056, 1176, 1399
BstV2I	GAAGAC	1 cut(s)	783
BstX2I	RGATCY	5 cut(s)	318, 874, 982, 1784, 2077
BstYI	RGATCY	5 cut(s)	318, 874, 982, 1784, 2077
BstZ17I	GTATAC	1 cut(s)	1516
Bsu15I	ATCGAT	1 cut(s)	1929
BsuI	GTATCC	1 cut(s)	1964
BsuRI	GGCC	5 cut(s)	1086, 1323, 1886, 1921, 2254
BsuTUI	ATCGAT	1 cut(s)	1929
BtgI	CCRYGG	3 cut(s)	1374, 1568, 2259
BtgZI	GCGATG	1 cut(s)	927
BtsCI	GGATG	2 cut(s)	179, 2440
BtsI	GCAGTG	1 cut(s)	1266
BtsIMutI	CAGTG	6 cut(s)	135, 424, 555, 1177, 1266, 1812
Cac8I	GCNNGC	3 cut(s)	1162, 1240, 2176
CaiI	CAGNNNCTG	1 cut(s)	610
Cfr13I	GGNCC	4 cut(s)	641, 1085, 1919, 2253
ClaI	ATCGAT	1 cut(s)	1929
CseI	GACGC	2 cut(s)	1038, 2333
Csp6I	GTAC	6 cut(s)	283, 943, 996, 1451, 1947, 2340
CviAII	CATG	5 cut(s)	1351, 1375, 1882, 1940, 2260
CviQI	GTAC	6 cut(s)	283, 943, 996, 1451, 1947, 2340
DraI	TTTAAA	1 cut(s)	16
DriI	GACNNNNNGTC	1 cut(s)	1338
EaeI	YGGCCR	1 cut(s)	1884
Eam1104I	CTCTTC	3 cut(s)	970, 1298, 2091
Eam1105I	GACNNNNNGTC	1 cut(s)	1338
EarI	CTCTTC	3 cut(s)	970, 1298, 2091
EciI	GGCGGA	2 cut(s)	311, 376
Eco130I	CCWWGG	4 cut(s)	1318, 1374, 1887, 2259
Eco24I	GRGCYC	1 cut(s)	1134
Eco31I	GGTCTC	1 cut(s)	1578
Eco47I	GGWCC	1 cut(s)	641
Eco57I	CTGAAG	4 cut(s)	447, 795, 1736, 2349
Eco88I	CYCGRG	2 cut(s)	1133, 2425
Eco91I	GGTNACC	2 cut(s)	134, 1739
EcoO109I	RGGNCCY	2 cut(s)	1919, 2253
EcoO65I	GGTNACC	2 cut(s)	134, 1739
EcoRI	GAATTC	1 cut(s)	1198
EcoRII	CCWGG	4 cut(s)	588, 857, 877, 2317
EcoT14I	CCWWGG	4 cut(s)	1318, 1374, 1887, 2259
EcoT22I	ATGCAT	1 cut(s)	1781
EcoT38I	GRGCYC	1 cut(s)	1134
ErhI	CCWWGG	4 cut(s)	1318, 1374, 1887, 2259
Esp3I	CGTCTC	1 cut(s)	2088
FaeI	CATG	5 cut(s)	1354, 1378, 1885, 1943, 2263
FalI	AAGNNNNNCTT	4 cut(s)	272, 304, 1511, 1543
FaqI	GGGAC	4 cut(s)	524, 1326, 1411, 1596
FatI	CATG	5 cut(s)	1350, 1374, 1881, 1939, 2259
FauNDI	CATATG	1 cut(s)	1393
FblI	GTMKAC	1 cut(s)	1515
Fnu4HI	GCNGC	5 cut(s)	242, 744, 1070, 1165, 1413
FokI	GGATG	2 cut(s)	166, 2447
FriOI	GRGCYC	1 cut(s)	1134
Fsp4HI	GCNGC	5 cut(s)	242, 744, 1070, 1165, 1413
FspBI	CTAG	5 cut(s)	149, 704, 1407, 1791, 2282
GluI	GCNGC	5 cut(s)	242, 744, 1070, 1165, 1413
GsaI	CCCAGC	3 cut(s)	1275, 1486, 1749
GsuI	CTGGAG	2 cut(s)	632, 963
HaeIII	GGCC	5 cut(s)	1086, 1323, 1886, 1921, 2254
HgaI	GACGC	2 cut(s)	1038, 2333
Hin1II	CATG	5 cut(s)	1354, 1378, 1885, 1943, 2263
HincII	GTYRAC	2 cut(s)	961, 2248
HindII	GTYRAC	2 cut(s)	961, 2248
HphI	GGTGA	8 cut(s)	463, 472, 478, 640, 1622, 1733, 2113, 2491
Hpy166II	GTNNAC	9 cut(s)	285, 454, 641, 867, 961, 1099, 1516, 2104, 2248
Hpy8I	GTNNAC	9 cut(s)	285, 454, 641, 867, 961, 1099, 1516, 2104, 2248
Hpy99I	CGWCG	2 cut(s)	2327, 2393
HpyCH4III	ACNGT	7 cut(s)	107, 130, 140, 796, 871, 1572, 2384
HpyCH4IV	ACGT	4 cut(s)	192, 456, 1218, 2388
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1412, 1892, 2117, 2149
HpySE526I	ACGT	4 cut(s)	192, 456, 1218, 2388
Hsp92II	CATG	5 cut(s)	1354, 1378, 1885, 1943, 2263
LmnI	GCTCC	4 cut(s)	790, 982, 2149, 2356
Lsp1109I	GCAGC	4 cut(s)	730, 1056, 1176, 1399
LweI	GCATC	1 cut(s)	1602
MaeI	CTAG	5 cut(s)	149, 704, 1407, 1791, 2282
MaeII	ACGT	4 cut(s)	192, 456, 1218, 2388
MaeIII	GTNAC	8 cut(s)	134, 457, 853, 1042, 1214, 1628, 1739, 2384
MboII	GAAGA	8 cut(s)	256, 788, 957, 1308, 1315, 2078, 2146, 2342
MflI	RGATCY	5 cut(s)	318, 874, 982, 1784, 2077
MhlI	GDGCHC	1 cut(s)	1134
MlsI	TGGCCA	1 cut(s)	1886
MluNI	TGGCCA	1 cut(s)	1886
MlyI	GAGTC	3 cut(s)	956, 1348, 2396
MmeI	TCCRAC	3 cut(s)	1201, 1736, 2127
Mox20I	TGGCCA	1 cut(s)	1886
Mph1103I	ATGCAT	1 cut(s)	1781
MroXI	GAANNNNTTC	1 cut(s)	1363
MscI	TGGCCA	1 cut(s)	1886
MseI	TTAA	6 cut(s)	15, 438, 750, 1008, 1751, 1956
MslI	CAYNNNNRTG	2 cut(s)	1728, 1842
Msp20I	TGGCCA	1 cut(s)	1886
MspA1I	CMGCKG	3 cut(s)	244, 940, 2476
MspCI	CTTAAG	1 cut(s)	1750
MspR9I	CCNGG	4 cut(s)	590, 859, 879, 2319
Mva1269I	GAATGC	1 cut(s)	509
MvaI	CCWGG	4 cut(s)	590, 859, 879, 2319
MwoI	GCNNNNNNNGC	4 cut(s)	1412, 1892, 2117, 2149
NcoI	CCATGG	2 cut(s)	1374, 2259
NdeI	CATATG	1 cut(s)	1393
NlaIII	CATG	5 cut(s)	1354, 1378, 1885, 1943, 2263
NlaIV	GGNNCC	9 cut(s)	320, 687, 805, 876, 1237, 1360, 1525, 1711, 1920
NmeAIII	GCCGAG	2 cut(s)	803, 2245
NmuCI	GTSAC	3 cut(s)	457, 1628, 1739
NsiI	ATGCAT	1 cut(s)	1781
NspV	TTCGAA	3 cut(s)	734, 1196, 1208
PaeR7I	CTCGAG	2 cut(s)	1133, 2425
PctI	GAATGC	1 cut(s)	509
PdmI	GAANNNNTTC	1 cut(s)	1363
PfoI	TCCNGGA	1 cut(s)	877
PkrI	GCNGC	5 cut(s)	243, 745, 1071, 1166, 1414
PleI	GAGTC	3 cut(s)	956, 1347, 2396
PpsI	GAGTC	3 cut(s)	956, 1347, 2396
PshBI	ATTAAT	1 cut(s)	1008
Psp1406I	AACGTT	1 cut(s)	1218
Psp6I	CCWGG	4 cut(s)	588, 857, 877, 2317
PspEI	GGTNACC	2 cut(s)	134, 1739
PspFI	CCCAGC	3 cut(s)	1271, 1482, 1745
PspGI	CCWGG	4 cut(s)	588, 857, 877, 2317
PspN4I	GGNNCC	9 cut(s)	320, 687, 805, 876, 1237, 1360, 1525, 1711, 1920
PspPI	GGNCC	4 cut(s)	641, 1085, 1919, 2253
PstNI	CAGNNNCTG	1 cut(s)	610
PsuI	RGATCY	5 cut(s)	318, 874, 982, 1784, 2077
PvuII	CAGCTG	2 cut(s)	940, 2476
RsaI	GTAC	6 cut(s)	284, 944, 997, 1452, 1948, 2341
RsaNI	GTAC	6 cut(s)	283, 943, 996, 1451, 1947, 2340
RseI	CAYNNNNRTG	2 cut(s)	1728, 1842
SaqAI	TTAA	6 cut(s)	15, 438, 750, 1008, 1751, 1956
SatI	GCNGC	5 cut(s)	242, 744, 1070, 1165, 1413
Sau96I	GGNCC	4 cut(s)	641, 1085, 1919, 2253
ScaI	AGTACT	1 cut(s)	997
SchI	GAGTC	3 cut(s)	956, 1348, 2396
ScrFI	CCNGG	4 cut(s)	590, 859, 879, 2319
SduI	GDGCHC	1 cut(s)	1134
SfaNI	GCATC	1 cut(s)	1602
SfcI	CTRYAG	4 cut(s)	126, 522, 1423, 2380
Sfr274I	CTCGAG	2 cut(s)	1133, 2425
SfuI	TTCGAA	3 cut(s)	734, 1196, 1208
SinI	GGWCC	1 cut(s)	641
SlaI	CTCGAG	2 cut(s)	1133, 2425
SmiMI	CAYNNNNRTG	2 cut(s)	1728, 1842
SmlI	CTYRAG	3 cut(s)	1133, 1750, 2425
SmoI	CTYRAG	3 cut(s)	1133, 1750, 2425
SsiI	CCGC	7 cut(s)	242, 306, 322, 387, 1633, 1854, 2217
SspI	AATATT	1 cut(s)	1988
SspMI	CTAG	5 cut(s)	149, 704, 1407, 1791, 2282
StyD4I	CCNGG	4 cut(s)	588, 857, 877, 2317
StyI	CCWWGG	4 cut(s)	1318, 1374, 1887, 2259
TaaI	ACNGT	7 cut(s)	107, 130, 140, 796, 871, 1572, 2384
TaiI	ACGT	4 cut(s)	195, 459, 1221, 2391
TaqI	TCGA	8 cut(s)	734, 898, 1134, 1196, 1208, 1929, 2391, 2426
TatI	WGTACW	5 cut(s)	282, 942, 995, 1450, 1946
TauI	GCSGC	1 cut(s)	244
Tru1I	TTAA	6 cut(s)	15, 438, 750, 1008, 1751, 1956
Tru9I	TTAA	6 cut(s)	15, 438, 750, 1008, 1751, 1956
TscAI	CASTG	6 cut(s)	135, 424, 562, 1177, 1266, 1819
TseFI	GTSAC	3 cut(s)	457, 1628, 1739
TseI	GCWGC	4 cut(s)	743, 1069, 1164, 1412
Tsp45I	GTSAC	3 cut(s)	457, 1628, 1739
TspGWI	ACGGA	4 cut(s)	327, 1616, 1722, 2070
TspRI	CASTG	6 cut(s)	135, 424, 562, 1177, 1266, 1819
Vha464I	CTTAAG	1 cut(s)	1750
VpaK11BI	GGWCC	1 cut(s)	641
VspI	ATTAAT	1 cut(s)	1008
XapI	RAATTY	6 cut(s)	17, 443, 584, 1198, 2204, 2313
XbaI	TCTAGA	1 cut(s)	2281
XcmI	CCANNNNNNNNNTGG	1 cut(s)	127
XhoI	CTCGAG	2 cut(s)	1133, 2425
XmiI	GTMKAC	1 cut(s)	1515
XmnI	GAANNNNTTC	1 cut(s)	1363
XspI	CTAG	5 cut(s)	149, 704, 1407, 1791, 2282
ZrmI	AGTACT	1 cut(s)	997
Zsp2I	ATGCAT	1 cut(s)	1781

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.