AT5G60750

CAAX amino terminal protease family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0013503
Physical Location & Seq
Forward (+)
24430830 .. 24433394
2565 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G60750.1

Sequence Viewer

Length: 1044 bp
ATGTTGACCTCTTCTTGCTCTTCTTCGTCTCTCCTCTGCCATCGCCCAGCTCTCTCTAGTTCGCGTTCCAAGTTTAGGGTTCCTTGTCGAACTGTTTTCTCTCCTGCTCTTACCAAGATTTCCCCTTTAACTGCTTCTTCACCTTCTAAGTCCGCCAAGCATAAATGGAAGATTTTGTGTTTTAGAAATGAAGATTCTGCTCCCGAGAATCCGGAGCATTTTGTGCCTGAGGAATTAGTTAAGCCAGATCAAGATTCTCCATGTACAGATAAAACAGATTGGAAGGCAACTTTTCAAAAGGCTGCAGATGCAGTTTTGAAGGCCATTGGGACTCGTTGGAAGGTACCATGGACTGTCGAGACCATTGTGCAGGTAATGCTTCTGTGGGTAGCCGCTTTCTGGTTCATTGGTTCATGGATGATCCCATTCATGGCTCATATATCAGGTTTCCACAAAGAATCCCTAACATTTAGAGGCCAAGCTTTGTTCAGTCTGATAACCGATGTAACAGAAGGCCTAGCCGGGATTGCTATCCTCCACCGTTGCCTCTCCATGTTCCGTCCACTTGCAAGTGATTGGTTCCGCTTTACCCTTAAAGGAAACTGGCAACTAGATGTTATCATAGGCTGTTTCATGTTCCCTTTCGTTAACCGGCTCTCCCAATTAAACCTAAACCTCTTGCCACTCCCACCAACCTCAAGTCCAGTCTCACTCTCAAGTGTCGAGCAGTCTATAATGGCTAGAGACCCTGTGGCAATGGCACTGTATGCAGTTGTAGTATCAATTTGTGCACCGGTTTGGGAAGAGATAGTGTTCAGAGGGTTCTTGTTACCGTCTCTAACTAGGTACATGCCAGTTTGGTGTGCGATTCTTGTGAGTTCGATTGCATTTGCTTTGGCACATTTCAATGTGCAGAGGATGTTACCATTGGTGTTCCTTGGAGTGGTATTGGGTTTGATATTCGCAAGGTCAAGGAACTTGTTACCTTCAATGCTGTTGCATAGCTTGTGGAACGGCTTTGTATTCATGGAATTGATGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abi

Protein Analysis

347

Amino Acids

39.0

Weight (kDa)

9.33

Isoelectric Point (pI)

57.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rce1-like PF02517 253 - 339 1.3e-23 Type II CAAX prenyl endopeptidase Rce1-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013503)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G60750
fragaria_vesca FvH4_5g03580
malus_domestica MD06G1095700.v1.1 MD14G1115700.v1.1
prunus_persica Prupe.5G110300_v2.0.a1 Prupe.5G110300_v2.0.a1
pyrus_communis pycom06g09200
rosa_chinensis RchiOBHm_Chr7g0196131
rosa_laevigata RLG00000004061
rosa_multiflora Rmu_sc0003017.1_g000007 Rmu_sc0003061.1_g000001
rosa_roxburghii Rroxscaffold_3G00259750
rosa_rugosa Rorug07G0030800
rosa_samantha Rh7AG156800 Rh7BG158500 Rh7CG162300 Rh7DG157600
rosa_wichuraiana Rw7G013390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 361
Acc65I GGTACC 1 cut(s) 343
AccB1I GGYRCC 1 cut(s) 343
AccII CGCG 1 cut(s) 64
AccIII TCCGGA 1 cut(s) 211
AciI CCGC 3 cut(s) 153, 393, 583
AclWI GGATC 1 cut(s) 415
AfaI GTAC 3 cut(s) 265, 345, 848
AfiI CCNNNNNNNGG 4 cut(s) 75, 399, 430, 943
AgeI ACCGGT 1 cut(s) 793
AgsI TTSAA 4 cut(s) 296, 319, 907, 990
AluBI AGCT 3 cut(s) 50, 482, 1005
AluI AGCT 3 cut(s) 50, 482, 1005
Alw21I GWGCWC 1 cut(s) 793
Alw26I GTCTC 5 cut(s) 33, 353, 712, 738, 840
Alw44I GTGCAC 1 cut(s) 789
AlwI GGATC 1 cut(s) 415
Ama87I CYCGRG 1 cut(s) 203
Aor13HI TCCGGA 1 cut(s) 211
AoxI GGCC 3 cut(s) 321, 475, 514
ApaLI GTGCAC 1 cut(s) 789
ApeKI GCWGC 1 cut(s) 302
AsiGI ACCGGT 1 cut(s) 793
Asp718I GGTACC 1 cut(s) 343
AsuC2I CCSGG 1 cut(s) 523
AsuHPI GGTGA 1 cut(s) 132
AvaI CYCGRG 1 cut(s) 203
AxyI CCTNAGG 1 cut(s) 228
BaeGI GKGCMC 1 cut(s) 793
BanI GGYRCC 1 cut(s) 343
Bbv12I GWGCWC 1 cut(s) 793
BbvI GCAGC 1 cut(s) 289
BccI CCATC 1 cut(s) 48
BceAI ACGGC 1 cut(s) 1030
BcnI CCSGG 1 cut(s) 523
BcoDI GTCTC 5 cut(s) 33, 353, 712, 738, 840
BfaI CTAG 5 cut(s) 57, 518, 611, 741, 843
BfmI CTRYAG 1 cut(s) 303
BfuAI ACCTGC 1 cut(s) 361
BisI GCNGC 2 cut(s) 303, 393
BlsI GCNGC 2 cut(s) 304, 394
Bme1390I CCNGG 1 cut(s) 523
BmeT110I CYCGRG 1 cut(s) 203
BmiI GGNNCC 3 cut(s) 81, 345, 581
BmrFI CCNGG 1 cut(s) 523
BmsI GCATC 2 cut(s) 298, 1026
BpuEI CTTGAG 2 cut(s) 682, 700
BpuMI CCSGG 1 cut(s) 523
BsaBI GATNNNNATC 1 cut(s) 530
BsaI GGTCTC 2 cut(s) 353, 738
BsaJI CCNNGG 2 cut(s) 347, 937
BsaWI WCCGGW 2 cut(s) 211, 793
BsaXI ACNNNNNCTCC 2 cut(s) 641, 671
Bsc4I CCNNNNNNNGG 4 cut(s) 75, 399, 430, 943
Bse118I RCCGGY 2 cut(s) 651, 793
Bse1I ACTGG 3 cut(s) 608, 704, 854
Bse21I CCTNAGG 1 cut(s) 228
Bse3DI GCAATG 1 cut(s) 762
Bse8I GATNNNNATC 1 cut(s) 530
BseAI TCCGGA 1 cut(s) 211
BseDI CCNNGG 2 cut(s) 347, 937
BseGI GGATG 2 cut(s) 423, 924
BseJI GATNNNNATC 1 cut(s) 530
BseLI CCNNNNNNNGG 4 cut(s) 75, 399, 430, 943
BseMI GCAATG 1 cut(s) 762
BseMII CTCAG 1 cut(s) 219
BseNI ACTGG 3 cut(s) 608, 704, 854
BseRI GAGGAG 1 cut(s) 23
BseSI GKGCMC 1 cut(s) 793
BseXI GCAGC 1 cut(s) 289
BseYI CCCAGC 1 cut(s) 46
BsgI GTGCAG 2 cut(s) 389, 932
Bsh1236I CGCG 1 cut(s) 64
BshFI GGCC 3 cut(s) 323, 477, 516
BshNI GGYRCC 1 cut(s) 343
BshTI ACCGGT 1 cut(s) 793
BsiHKAI GWGCWC 1 cut(s) 793
BsiHKCI CYCGRG 1 cut(s) 203
BsiSI CCGG 4 cut(s) 212, 522, 652, 794
BslFI GGGAC 1 cut(s) 343
BslI CCNNNNNNNGG 4 cut(s) 75, 399, 430, 943
BsmAI GTCTC 5 cut(s) 33, 353, 712, 738, 840
BsmBI CGTCTC 2 cut(s) 33, 840
BsmFI GGGAC 1 cut(s) 343
BsnI GGCC 3 cut(s) 323, 477, 516
Bso31I GGTCTC 2 cut(s) 353, 738
BsoBI CYCGRG 1 cut(s) 203
Bsp1286I GDGCHC 1 cut(s) 793
Bsp13I TCCGGA 1 cut(s) 211
Bsp1407I TGTACA 1 cut(s) 263
Bsp143I GATC 2 cut(s) 247, 420
Bsp19I CCATGG 1 cut(s) 347
BspACI CCGC 3 cut(s) 153, 393, 583
BspANI GGCC 3 cut(s) 323, 477, 516
BspCNI CTCAG 1 cut(s) 220
BspEI TCCGGA 1 cut(s) 211
BspFNI CGCG 1 cut(s) 64
BspLI GGNNCC 3 cut(s) 81, 345, 581
BspMAI CTGCAG 1 cut(s) 307
BspMI ACCTGC 1 cut(s) 361
BspPI GGATC 1 cut(s) 415
BspQI GCTCTTC 1 cut(s) 25
BspT107I GGYRCC 1 cut(s) 343
BspTNI GGTCTC 2 cut(s) 353, 738
BsrDI GCAATG 1 cut(s) 762
BsrFI RCCGGY 2 cut(s) 651, 793
BsrGI TGTACA 1 cut(s) 263
BsrI ACTGG 3 cut(s) 608, 704, 854
BssAI RCCGGY 2 cut(s) 651, 793
BssECI CCNNGG 2 cut(s) 347, 937
BssMI GATC 2 cut(s) 247, 420
BssT1I CCWWGG 2 cut(s) 347, 937
Bst4CI ACNGT 5 cut(s) 94, 355, 542, 765, 834
Bst6I CTCTTC 3 cut(s) 16, 25, 798
BstAPI GCANNNNNTGC 3 cut(s) 223, 376, 767
BstAUI TGTACA 1 cut(s) 263
BstDEI CTNAG 2 cut(s) 147, 228
BstDSI CCRYGG 1 cut(s) 347
BstF5I GGATG 2 cut(s) 423, 924
BstFNI CGCG 1 cut(s) 64
BstKTI GATC 2 cut(s) 250, 423
BstMAI GTCTC 5 cut(s) 33, 353, 712, 738, 840
BstMBI GATC 2 cut(s) 247, 420
BstMWI GCNNNNNNNGC 5 cut(s) 223, 308, 376, 527, 767
BstNSI RCATGY 1 cut(s) 853
BstSCI CCNGG 1 cut(s) 521
BstSFI CTRYAG 1 cut(s) 303
BstSLI GKGCMC 1 cut(s) 793
BstUI CGCG 1 cut(s) 64
BstV1I GCAGC 1 cut(s) 289
Bsu36I CCTNAGG 1 cut(s) 228
BsuRI GGCC 3 cut(s) 323, 477, 516
BtgI CCRYGG 1 cut(s) 347
BtgZI GCGATG 1 cut(s) 26
BtsCI GGATG 2 cut(s) 423, 924
BtsIMutI CAGTG 1 cut(s) 761
BveI ACCTGC 1 cut(s) 361
Cfr10I RCCGGY 2 cut(s) 651, 793
Csp6I GTAC 3 cut(s) 264, 344, 847
CspAI ACCGGT 1 cut(s) 793
CviAII CATG 8 cut(s) 261, 348, 414, 430, 553, 634, 850, 1027
CviQI GTAC 3 cut(s) 264, 344, 847
DdeI CTNAG 2 cut(s) 147, 228
DpnI GATC 2 cut(s) 249, 422
DpnII GATC 2 cut(s) 247, 420
Eam1104I CTCTTC 3 cut(s) 16, 25, 798
EarI CTCTTC 3 cut(s) 16, 25, 798
EciI GGCGGA 1 cut(s) 142
Eco130I CCWWGG 2 cut(s) 347, 937
Eco147I AGGCCT 1 cut(s) 516
Eco31I GGTCTC 2 cut(s) 353, 738
Eco81I CCTNAGG 1 cut(s) 228
Eco88I CYCGRG 1 cut(s) 203
EcoT14I CCWWGG 2 cut(s) 347, 937
ErhI CCWWGG 2 cut(s) 347, 937
Esp3I CGTCTC 2 cut(s) 33, 840
FaeI CATG 8 cut(s) 264, 351, 417, 433, 556, 637, 853, 1030
FaqI GGGAC 1 cut(s) 343
FatI CATG 8 cut(s) 260, 347, 413, 429, 552, 633, 849, 1026
Fnu4HI GCNGC 2 cut(s) 303, 393
FokI GGATG 2 cut(s) 430, 931
Fsp4HI GCNGC 2 cut(s) 303, 393
FspBI CTAG 5 cut(s) 57, 518, 611, 741, 843
GluI GCNGC 2 cut(s) 303, 393
GsaI CCCAGC 1 cut(s) 50
HaeIII GGCC 3 cut(s) 323, 477, 516
HapII CCGG 4 cut(s) 212, 522, 652, 794
Hin1II CATG 8 cut(s) 264, 351, 417, 433, 556, 637, 853, 1030
HincII GTYRAC 2 cut(s) 6, 649
HindII GTYRAC 2 cut(s) 6, 649
HindIII AAGCTT 1 cut(s) 480
HinfI GANTC 6 cut(s) 194, 208, 254, 331, 458, 868
HpaI GTTAAC 1 cut(s) 649
HpaII CCGG 4 cut(s) 212, 522, 652, 794
HphI GGTGA 1 cut(s) 132
Hpy166II GTNNAC 4 cut(s) 6, 563, 649, 791
Hpy188I TCNGA 2 cut(s) 495, 818
Hpy188III TCNNGA 4 cut(s) 203, 212, 251, 358
Hpy8I GTNNAC 4 cut(s) 6, 563, 649, 791
HpyAV CCTTC 6 cut(s) 153, 277, 313, 334, 506, 996
HpyCH4III ACNGT 5 cut(s) 94, 355, 542, 765, 834
HpyCH4V TGCA 9 cut(s) 305, 311, 370, 569, 770, 791, 887, 913, 1000
HpyF10VI GCNNNNNNNGC 5 cut(s) 223, 308, 376, 527, 767
HpyF3I CTNAG 2 cut(s) 147, 228
Hsp92II CATG 8 cut(s) 264, 351, 417, 433, 556, 637, 853, 1030
Kpn2I TCCGGA 1 cut(s) 211
KpnI GGTACC 1 cut(s) 347
KspAI GTTAAC 1 cut(s) 649
Kzo9I GATC 2 cut(s) 247, 420
LguI GCTCTTC 1 cut(s) 25
LmnI GCTCC 2 cut(s) 205, 214
Lsp1109I GCAGC 1 cut(s) 289
LweI GCATC 2 cut(s) 298, 1026
MaeI CTAG 5 cut(s) 57, 518, 611, 741, 843
MaeIII GTNAC 4 cut(s) 505, 828, 921, 981
MalI GATC 2 cut(s) 249, 422
MboI GATC 2 cut(s) 247, 420
MboII GAAGA 7 cut(s) 3, 12, 15, 129, 181, 203, 815
MhlI GDGCHC 1 cut(s) 793
MluCI AATT 4 cut(s) 233, 662, 783, 1031
MlyI GAGTC 1 cut(s) 325
MmeI TCCRAC 1 cut(s) 317
MroI TCCGGA 1 cut(s) 211
MseI TTAA 5 cut(s) 128, 240, 594, 648, 665
MslI CAYNNNNRTG 1 cut(s) 906
MspI CCGG 4 cut(s) 212, 522, 652, 794
MspR9I CCNGG 1 cut(s) 523
MvnI CGCG 1 cut(s) 64
MwoI GCNNNNNNNGC 5 cut(s) 223, 308, 376, 527, 767
NciI CCSGG 1 cut(s) 523
NcoI CCATGG 1 cut(s) 347
NdeII GATC 2 cut(s) 247, 420
NlaIII CATG 8 cut(s) 264, 351, 417, 433, 556, 637, 853, 1030
NlaIV GGNNCC 3 cut(s) 81, 345, 581
NspI RCATGY 1 cut(s) 853
PceI AGGCCT 1 cut(s) 516
PciSI GCTCTTC 1 cut(s) 25
PfeI GAWTC 5 cut(s) 194, 208, 254, 458, 868
PinAI ACCGGT 1 cut(s) 793
PkrI GCNGC 2 cut(s) 304, 394
PleI GAGTC 1 cut(s) 325
PpsI GAGTC 1 cut(s) 325
PspFI CCCAGC 1 cut(s) 46
PspN4I GGNNCC 3 cut(s) 81, 345, 581
PstI CTGCAG 1 cut(s) 307
RsaI GTAC 3 cut(s) 265, 345, 848
RsaNI GTAC 3 cut(s) 264, 344, 847
RseI CAYNNNNRTG 1 cut(s) 906
SapI GCTCTTC 1 cut(s) 25
SaqAI TTAA 5 cut(s) 128, 240, 594, 648, 665
SatI GCNGC 2 cut(s) 303, 393
Sau3AI GATC 2 cut(s) 247, 420
SchI GAGTC 1 cut(s) 325
ScrFI CCNGG 1 cut(s) 523
SduI GDGCHC 1 cut(s) 793
SfaNI GCATC 2 cut(s) 298, 1026
SfcI CTRYAG 1 cut(s) 303
SmiMI CAYNNNNRTG 1 cut(s) 906
SmlI CTYRAG 2 cut(s) 697, 715
SmoI CTYRAG 2 cut(s) 697, 715
Sse9I AATT 4 cut(s) 233, 662, 783, 1031
SseBI AGGCCT 1 cut(s) 516
SsiI CCGC 3 cut(s) 153, 393, 583
SspMI CTAG 5 cut(s) 57, 518, 611, 741, 843
StuI AGGCCT 1 cut(s) 516
StyD4I CCNGG 1 cut(s) 521
StyI CCWWGG 2 cut(s) 347, 937
TaaI ACNGT 5 cut(s) 94, 355, 542, 765, 834
TaqI TCGA 4 cut(s) 88, 357, 723, 881
TasI AATT 4 cut(s) 233, 662, 783, 1031
TatI WGTACW 1 cut(s) 263
TauI GCSGC 1 cut(s) 395
TfiI GAWTC 5 cut(s) 194, 208, 254, 458, 868
Tru1I TTAA 5 cut(s) 128, 240, 594, 648, 665
Tru9I TTAA 5 cut(s) 128, 240, 594, 648, 665
TscAI CASTG 1 cut(s) 768
TseI GCWGC 1 cut(s) 302
TspDTI ATGAA 6 cut(s) 204, 394, 402, 418, 622, 1015
TspGWI ACGGA 1 cut(s) 548
TspRI CASTG 1 cut(s) 768
VneI GTGCAC 1 cut(s) 789
XceI RCATGY 1 cut(s) 853
XspI CTAG 5 cut(s) 57, 518, 611, 741, 843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.