exocyst complex component
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G61010 AT5G61010 |
| fragaria_vesca | FvH4_5g13790 |
| prunus_persica | Prupe.5G205500_v2.0.a1 |
| rosa_laevigata | RLG00000005074 |
| rosa_multiflora | Rmu_ssc0000111.1_g000012 |
| rosa_rugosa | Rorug06G0453800 |
| rosa_samantha | Rh7BG055900 Rh7BG056000 Rh7DG056200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 606 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 256 |
| Acc16I | TGCGCA | 1 cut(s) | 1901 |
| AccI | GTMKAC | 2 cut(s) | 260, 1268 |
| AccII | CGCG | 2 cut(s) | 416, 1734 |
| AccIII | TCCGGA | 1 cut(s) | 32 |
| AciI | CCGC | 3 cut(s) | 238, 1212, 1732 |
| AclWI | GGATC | 4 cut(s) | 617, 1510, 1544, 1581 |
| AcuI | CTGAAG | 2 cut(s) | 306, 1277 |
| AfaI | GTAC | 4 cut(s) | 474, 521, 633, 1433 |
| AfeI | AGCGCT | 1 cut(s) | 1016 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 32, 244, 397, 1205, 1483 |
| AflIII | ACRYGT | 1 cut(s) | 1303 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 904 |
| AjnI | CCWGG | 2 cut(s) | 102, 1229 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 226, 258 |
| Alw21I | GWGCWC | 3 cut(s) | 441, 1601, 1731 |
| Alw26I | GTCTC | 6 cut(s) | 242, 541, 891, 1507, 1521, 1614 |
| AlwI | GGATC | 4 cut(s) | 617, 1510, 1544, 1581 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1718 |
| Ama87I | CYCGRG | 1 cut(s) | 1322 |
| Aor13HI | TCCGGA | 1 cut(s) | 32 |
| Aor51HI | AGCGCT | 1 cut(s) | 1016 |
| ApeKI | GCWGC | 2 cut(s) | 768, 1902 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 515, 547 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 212, 1472 |
| AspLEI | GCGC | 2 cut(s) | 1017, 1902 |
| AspS9I | GGNCC | 1 cut(s) | 1486 |
| AsuC2I | CCSGG | 1 cut(s) | 1262 |
| AsuHPI | GGTGA | 2 cut(s) | 56, 1214 |
| AvaI | CYCGRG | 1 cut(s) | 1322 |
| AvaII | GGWCC | 1 cut(s) | 1486 |
| AxyI | CCTNAGG | 1 cut(s) | 1379 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 162, 195, 1822, 1855 |
| BanII | GRGCYC | 3 cut(s) | 441, 1601, 1731 |
| BauI | CACGAG | 1 cut(s) | 1052 |
| BbsI | GAAGAC | 1 cut(s) | 1848 |
| Bbv12I | GWGCWC | 3 cut(s) | 441, 1601, 1731 |
| BbvI | GCAGC | 2 cut(s) | 755, 1914 |
| BccI | CCATC | 4 cut(s) | 364, 635, 1325, 1891 |
| BceAI | ACGGC | 1 cut(s) | 482 |
| BciT130I | CCWGG | 2 cut(s) | 104, 1231 |
| BclI | TGATCA | 4 cut(s) | 292, 682, 883, 1135 |
| BcnI | CCSGG | 1 cut(s) | 1262 |
| BcoDI | GTCTC | 6 cut(s) | 242, 541, 891, 1507, 1521, 1614 |
| BfaI | CTAG | 5 cut(s) | 137, 542, 1130, 1371, 1400 |
| BfmI | CTRYAG | 1 cut(s) | 915 |
| BfoI | RGCGCY | 1 cut(s) | 1018 |
| BglII | AGATCT | 1 cut(s) | 989 |
| BisI | GCNGC | 2 cut(s) | 769, 1903 |
| BlpI | GCTNAGC | 1 cut(s) | 1425 |
| BlsI | GCNGC | 2 cut(s) | 770, 1904 |
| Bme1390I | CCNGG | 3 cut(s) | 104, 1231, 1262 |
| Bme18I | GGWCC | 1 cut(s) | 1486 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 904 |
| BmeT110I | CYCGRG | 1 cut(s) | 1322 |
| BmgT120I | GGNCC | 1 cut(s) | 1486 |
| BmiI | GGNNCC | 1 cut(s) | 24 |
| BmrFI | CCNGG | 3 cut(s) | 104, 1231, 1262 |
| BmrI | ACTGGG | 1 cut(s) | 802 |
| BmsI | GCATC | 7 cut(s) | 97, 98, 132, 175, 463, 934, 1646 |
| BmuI | ACTGGG | 1 cut(s) | 802 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1757 |
| BpiI | GAAGAC | 1 cut(s) | 1848 |
| BpmI | CTGGAG | 1 cut(s) | 749 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1425 |
| BpuEI | CTTGAG | 3 cut(s) | 449, 1031, 1433 |
| BpuMI | CCSGG | 1 cut(s) | 1262 |
| BsaJI | CCNNGG | 1 cut(s) | 18 |
| BsaWI | WCCGGW | 1 cut(s) | 32 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 963, 993, 1326, 1345, 1356, 1375 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 32, 244, 397, 1205, 1483 |
| Bse1I | ACTGG | 3 cut(s) | 256, 797, 864 |
| Bse21I | CCTNAGG | 1 cut(s) | 1379 |
| Bse3DI | GCAATG | 3 cut(s) | 819, 1548, 1573 |
| BseAI | TCCGGA | 1 cut(s) | 32 |
| BseBI | CCWGG | 2 cut(s) | 104, 1231 |
| BseDI | CCNNGG | 1 cut(s) | 18 |
| BseGI | GGATG | 4 cut(s) | 112, 1063, 1317, 1824 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 32, 244, 397, 1205, 1483 |
| BseMI | GCAATG | 3 cut(s) | 819, 1548, 1573 |
| BseNI | ACTGG | 3 cut(s) | 256, 797, 864 |
| BseRI | GAGGAG | 2 cut(s) | 746, 950 |
| BseXI | GCAGC | 2 cut(s) | 755, 1914 |
| Bsh1236I | CGCG | 2 cut(s) | 416, 1734 |
| BsiHKAI | GWGCWC | 3 cut(s) | 441, 1601, 1731 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1322 |
| BsiSI | CCGG | 2 cut(s) | 33, 1262 |
| BslFI | GGGAC | 1 cut(s) | 1700 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 32, 244, 397, 1205, 1483 |
| BsmAI | GTCTC | 6 cut(s) | 242, 541, 891, 1507, 1521, 1614 |
| BsmBI | CGTCTC | 2 cut(s) | 1507, 1521 |
| BsmFI | GGGAC | 1 cut(s) | 1700 |
| BsoBI | CYCGRG | 1 cut(s) | 1322 |
| Bsp1286I | GDGCHC | 3 cut(s) | 441, 1601, 1731 |
| Bsp13I | TCCGGA | 1 cut(s) | 32 |
| Bsp1407I | TGTACA | 1 cut(s) | 472 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1425 |
| Bsp68I | TCGCGA | 1 cut(s) | 416 |
| BspACI | CCGC | 3 cut(s) | 238, 1212, 1732 |
| BspEI | TCCGGA | 1 cut(s) | 32 |
| BspFNI | CGCG | 2 cut(s) | 416, 1734 |
| BspLI | GGNNCC | 1 cut(s) | 24 |
| BspPI | GGATC | 4 cut(s) | 617, 1510, 1544, 1581 |
| BsrDI | GCAATG | 3 cut(s) | 819, 1548, 1573 |
| BsrGI | TGTACA | 1 cut(s) | 472 |
| BsrI | ACTGG | 3 cut(s) | 256, 797, 864 |
| BssECI | CCNNGG | 1 cut(s) | 18 |
| BssNAI | GTATAC | 1 cut(s) | 1269 |
| BssSI | CACGAG | 1 cut(s) | 1052 |
| BssT1I | CCWWGG | 1 cut(s) | 18 |
| Bst1107I | GTATAC | 1 cut(s) | 1269 |
| Bst2BI | CACGAG | 1 cut(s) | 1052 |
| Bst2UI | CCWGG | 2 cut(s) | 104, 1231 |
| Bst4CI | ACNGT | 2 cut(s) | 328, 400 |
| Bst6I | CTCTTC | 3 cut(s) | 203, 224, 1076 |
| BstAUI | TGTACA | 1 cut(s) | 472 |
| BstC8I | GCNNGC | 4 cut(s) | 673, 922, 998, 1555 |
| BstF5I | GGATG | 4 cut(s) | 112, 1063, 1317, 1824 |
| BstFNI | CGCG | 2 cut(s) | 416, 1734 |
| BstH2I | RGCGCY | 1 cut(s) | 1018 |
| BstHHI | GCGC | 2 cut(s) | 1017, 1902 |
| BstMAI | GTCTC | 6 cut(s) | 242, 541, 891, 1507, 1521, 1614 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 86, 401, 466, 475, 668, 1006, 1442, 1563 |
| BstNI | CCWGG | 2 cut(s) | 104, 1231 |
| BstNSI | RCATGY | 2 cut(s) | 63, 473 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1757 |
| BstSCI | CCNGG | 3 cut(s) | 102, 1229, 1260 |
| BstSFI | CTRYAG | 1 cut(s) | 915 |
| BstUI | CGCG | 2 cut(s) | 416, 1734 |
| BstV1I | GCAGC | 2 cut(s) | 755, 1914 |
| BstV2I | GAAGAC | 1 cut(s) | 1848 |
| BstX2I | RGATCY | 2 cut(s) | 989, 1586 |
| BstYI | RGATCY | 2 cut(s) | 989, 1586 |
| BstZ17I | GTATAC | 1 cut(s) | 1269 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1379 |
| BtgZI | GCGATG | 3 cut(s) | 397, 431, 1749 |
| BtsCI | GGATG | 4 cut(s) | 112, 1063, 1317, 1824 |
| BtsI | GCAGTG | 2 cut(s) | 1286, 1895 |
| BtsIMutI | CAGTG | 5 cut(s) | 80, 871, 1286, 1445, 1895 |
| BtuMI | TCGCGA | 1 cut(s) | 416 |
| Cac8I | GCNNGC | 4 cut(s) | 673, 922, 998, 1555 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1718 |
| CfoI | GCGC | 2 cut(s) | 1017, 1902 |
| Cfr13I | GGNCC | 1 cut(s) | 1486 |
| CseI | GACGC | 2 cut(s) | 1178, 1524 |
| CsiI | ACCWGGT | 1 cut(s) | 1229 |
| Csp6I | GTAC | 4 cut(s) | 473, 520, 632, 1432 |
| CviQI | GTAC | 4 cut(s) | 473, 520, 632, 1432 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 256 |
| DriI | GACNNNNNGTC | 1 cut(s) | 904 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 256 |
| Eam1104I | CTCTTC | 3 cut(s) | 203, 224, 1076 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 904 |
| EarI | CTCTTC | 3 cut(s) | 203, 224, 1076 |
| Ecl136II | GAGCTC | 3 cut(s) | 439, 1599, 1729 |
| Eco130I | CCWWGG | 1 cut(s) | 18 |
| Eco24I | GRGCYC | 3 cut(s) | 441, 1601, 1731 |
| Eco32I | GATATC | 1 cut(s) | 594 |
| Eco47I | GGWCC | 1 cut(s) | 1486 |
| Eco47III | AGCGCT | 1 cut(s) | 1016 |
| Eco53kI | GAGCTC | 3 cut(s) | 439, 1599, 1729 |
| Eco57I | CTGAAG | 2 cut(s) | 306, 1277 |
| Eco81I | CCTNAGG | 1 cut(s) | 1379 |
| Eco88I | CYCGRG | 1 cut(s) | 1322 |
| EcoICRI | GAGCTC | 3 cut(s) | 439, 1599, 1729 |
| EcoRII | CCWGG | 2 cut(s) | 102, 1229 |
| EcoRV | GATATC | 1 cut(s) | 594 |
| EcoT14I | CCWWGG | 1 cut(s) | 18 |
| EcoT22I | ATGCAT | 1 cut(s) | 147 |
| EcoT38I | GRGCYC | 3 cut(s) | 441, 1601, 1731 |
| ErhI | CCWWGG | 1 cut(s) | 18 |
| Esp3I | CGTCTC | 2 cut(s) | 1507, 1521 |
| FaqI | GGGAC | 1 cut(s) | 1700 |
| FauI | CCCGC | 1 cut(s) | 1205 |
| FbaI | TGATCA | 4 cut(s) | 292, 682, 883, 1135 |
| FblI | GTMKAC | 2 cut(s) | 260, 1268 |
| Fnu4HI | GCNGC | 2 cut(s) | 769, 1903 |
| FokI | GGATG | 4 cut(s) | 119, 1070, 1304, 1811 |
| FriOI | GRGCYC | 3 cut(s) | 441, 1601, 1731 |
| Fsp4HI | GCNGC | 2 cut(s) | 769, 1903 |
| FspBI | CTAG | 5 cut(s) | 137, 542, 1130, 1371, 1400 |
| FspI | TGCGCA | 1 cut(s) | 1901 |
| GlaI | GCGC | 2 cut(s) | 1016, 1901 |
| GluI | GCNGC | 2 cut(s) | 769, 1903 |
| GsuI | CTGGAG | 1 cut(s) | 749 |
| HaeII | RGCGCY | 1 cut(s) | 1018 |
| HapII | CCGG | 2 cut(s) | 33, 1262 |
| HgaI | GACGC | 2 cut(s) | 1178, 1524 |
| HhaI | GCGC | 2 cut(s) | 1017, 1902 |
| Hin6I | GCGC | 2 cut(s) | 1015, 1900 |
| HinP1I | GCGC | 2 cut(s) | 1015, 1900 |
| HincII | GTYRAC | 3 cut(s) | 153, 261, 1309 |
| HindII | GTYRAC | 3 cut(s) | 153, 261, 1309 |
| HindIII | AAGCTT | 4 cut(s) | 345, 564, 699, 1253 |
| HpaII | CCGG | 2 cut(s) | 33, 1262 |
| HphI | GGTGA | 2 cut(s) | 56, 1214 |
| Hpy166II | GTNNAC | 7 cut(s) | 153, 261, 385, 520, 1269, 1309, 1690 |
| Hpy8I | GTNNAC | 7 cut(s) | 153, 261, 385, 520, 1269, 1309, 1690 |
| Hpy99I | CGWCG | 2 cut(s) | 265, 527 |
| HpyAV | CCTTC | 3 cut(s) | 1162, 1359, 1486 |
| HpyCH4III | ACNGT | 2 cut(s) | 328, 400 |
| HpyCH4IV | ACGT | 2 cut(s) | 318, 1305 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 86, 401, 466, 475, 668, 1006, 1442, 1563 |
| HpySE526I | ACGT | 2 cut(s) | 318, 1305 |
| HspAI | GCGC | 2 cut(s) | 1015, 1900 |
| Kpn2I | TCCGGA | 1 cut(s) | 32 |
| Ksp22I | TGATCA | 4 cut(s) | 292, 682, 883, 1135 |
| LmnI | GCTCC | 5 cut(s) | 129, 1596, 1604, 1734, 1863 |
| Lsp1109I | GCAGC | 2 cut(s) | 755, 1914 |
| LweI | GCATC | 7 cut(s) | 97, 98, 132, 175, 463, 934, 1646 |
| MabI | ACCWGGT | 1 cut(s) | 1229 |
| MaeI | CTAG | 5 cut(s) | 137, 542, 1130, 1371, 1400 |
| MaeII | ACGT | 2 cut(s) | 318, 1305 |
| MaeIII | GTNAC | 6 cut(s) | 62, 131, 742, 1390, 1478, 1570 |
| MflI | RGATCY | 2 cut(s) | 989, 1586 |
| MhlI | GDGCHC | 3 cut(s) | 441, 1601, 1731 |
| MluCI | AATT | 5 cut(s) | 112, 607, 909, 948, 1101 |
| MlyI | GAGTC | 5 cut(s) | 536, 914, 1268, 1307, 1625 |
| Mph1103I | ATGCAT | 1 cut(s) | 147 |
| MroI | TCCGGA | 1 cut(s) | 32 |
| MroXI | GAANNNNTTC | 2 cut(s) | 212, 1472 |
| MseI | TTAA | 4 cut(s) | 75, 837, 1097, 1157 |
| MslI | CAYNNNNRTG | 2 cut(s) | 416, 579 |
| MspA1I | CMGCKG | 2 cut(s) | 768, 1429 |
| MspI | CCGG | 2 cut(s) | 33, 1262 |
| MspR9I | CCNGG | 3 cut(s) | 104, 1231, 1262 |
| MvaI | CCWGG | 2 cut(s) | 104, 1231 |
| MvnI | CGCG | 2 cut(s) | 416, 1734 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 86, 401, 466, 475, 668, 1006, 1442, 1563 |
| NciI | CCSGG | 1 cut(s) | 1262 |
| NlaIV | GGNNCC | 1 cut(s) | 24 |
| NmuCI | GTSAC | 4 cut(s) | 62, 131, 1390, 1570 |
| NruI | TCGCGA | 1 cut(s) | 416 |
| NsbI | TGCGCA | 1 cut(s) | 1901 |
| NsiI | ATGCAT | 1 cut(s) | 147 |
| NspI | RCATGY | 2 cut(s) | 63, 473 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1059 |
| PdmI | GAANNNNTTC | 2 cut(s) | 212, 1472 |
| PfoI | TCCNGGA | 1 cut(s) | 1260 |
| PkrI | GCNGC | 2 cut(s) | 770, 1904 |
| PleI | GAGTC | 5 cut(s) | 535, 913, 1268, 1307, 1625 |
| PpsI | GAGTC | 5 cut(s) | 535, 913, 1268, 1307, 1625 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1757 |
| PsiI | TTATAA | 1 cut(s) | 606 |
| Psp124BI | GAGCTC | 3 cut(s) | 441, 1601, 1731 |
| Psp6I | CCWGG | 2 cut(s) | 102, 1229 |
| PspGI | CCWGG | 2 cut(s) | 102, 1229 |
| PspN4I | GGNNCC | 1 cut(s) | 24 |
| PspPI | GGNCC | 1 cut(s) | 1486 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1718 |
| PsuI | RGATCY | 2 cut(s) | 989, 1586 |
| PvuII | CAGCTG | 2 cut(s) | 768, 1429 |
| RruI | TCGCGA | 1 cut(s) | 416 |
| RsaI | GTAC | 4 cut(s) | 474, 521, 633, 1433 |
| RsaNI | GTAC | 4 cut(s) | 473, 520, 632, 1432 |
| RseI | CAYNNNNRTG | 2 cut(s) | 416, 579 |
| SacI | GAGCTC | 3 cut(s) | 441, 1601, 1731 |
| SalI | GTCGAC | 1 cut(s) | 259 |
| SaqAI | TTAA | 4 cut(s) | 75, 837, 1097, 1157 |
| SatI | GCNGC | 2 cut(s) | 769, 1903 |
| Sau96I | GGNCC | 1 cut(s) | 1486 |
| SchI | GAGTC | 5 cut(s) | 536, 914, 1268, 1307, 1625 |
| ScrFI | CCNGG | 3 cut(s) | 104, 1231, 1262 |
| SduI | GDGCHC | 3 cut(s) | 441, 1601, 1731 |
| SexAI | ACCWGGT | 1 cut(s) | 1229 |
| SfaNI | GCATC | 7 cut(s) | 97, 98, 132, 175, 463, 934, 1646 |
| SfcI | CTRYAG | 1 cut(s) | 915 |
| SinI | GGWCC | 1 cut(s) | 1486 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 416, 579 |
| SmlI | CTYRAG | 3 cut(s) | 428, 1010, 1412 |
| SmoI | CTYRAG | 3 cut(s) | 428, 1010, 1412 |
| Sse9I | AATT | 5 cut(s) | 112, 607, 909, 948, 1101 |
| SsiI | CCGC | 3 cut(s) | 238, 1212, 1732 |
| SspMI | CTAG | 5 cut(s) | 137, 542, 1130, 1371, 1400 |
| SstI | GAGCTC | 3 cut(s) | 441, 1601, 1731 |
| StyD4I | CCNGG | 3 cut(s) | 102, 1229, 1260 |
| StyI | CCWWGG | 1 cut(s) | 18 |
| TaaI | ACNGT | 2 cut(s) | 328, 400 |
| TaiI | ACGT | 2 cut(s) | 321, 1308 |
| TaqI | TCGA | 6 cut(s) | 260, 561, 750, 1062, 1352, 1751 |
| TasI | AATT | 5 cut(s) | 112, 607, 909, 948, 1101 |
| TatI | WGTACW | 1 cut(s) | 472 |
| Tru1I | TTAA | 4 cut(s) | 75, 837, 1097, 1157 |
| Tru9I | TTAA | 4 cut(s) | 75, 837, 1097, 1157 |
| TscAI | CASTG | 5 cut(s) | 87, 871, 1293, 1452, 1902 |
| TseFI | GTSAC | 4 cut(s) | 62, 131, 1390, 1570 |
| TseI | GCWGC | 2 cut(s) | 768, 1902 |
| Tsp45I | GTSAC | 4 cut(s) | 62, 131, 1390, 1570 |
| TspGWI | ACGGA | 1 cut(s) | 1466 |
| TspRI | CASTG | 5 cut(s) | 87, 871, 1293, 1452, 1902 |
| VpaK11BI | GGWCC | 1 cut(s) | 1486 |
| XbaI | TCTAGA | 1 cut(s) | 1399 |
| XceI | RCATGY | 2 cut(s) | 63, 473 |
| XmiI | GTMKAC | 2 cut(s) | 260, 1268 |
| XmnI | GAANNNNTTC | 2 cut(s) | 212, 1472 |
| XspI | CTAG | 5 cut(s) | 137, 542, 1130, 1371, 1400 |
| Zsp2I | ATGCAT | 1 cut(s) | 147 |