Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0007322

Physical Location & Seq

Genomic Coordinates Forward (+)

58236170 .. 58239119

Gene Structure 2950 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0453800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1911 bp

ATGACCCATATGGGAGAATGGAGTAAAGTGAATTCTTTTCCTAGAGCAAATAAAAGAAGTGAAGAAGCAACTATTACAAATGGACGTGTTCAATCGCTACCAATCAAGGAAATTTATCCGGATGATAAGAATCATTTGCATCTGGATTCAAAGTCATTAGATTCATTGAGTCAGCCCCATTGCCTTGTATGCATGAACAAAGAAAGTTGCCGAATTGTGCGTTCAAGAACAAAACTAATGAACACATTAATAGAAAGGGGGAAGCCGCAGGAGGTCCAGTCCATTTTCAATGCTTTAATTGAAGAAGGACACAGACCATCATTGATATCGTACACTACCCTCCTGACTGCTTTGACCATCCAGAAGCACTTCGAGTCCATTCCTTCGGTTATATCACAGGTGGAAGAGAATGGTATGAAGCCTGATTCGATATTTTTCAATGCTGTTATTAATGCTTTTTCTGAAGCTGGGAAAATGGAGGAAGCCATGGACACAGTTCAGAAGATGAAGGAGAGTGGATTGAAACCCACTACTAGCACTTACAATACATTGATCAAAGGGTATGGGATTTCGGGTAAGCCTGAAGAGTCTTTGAAACTGCTTGAGATGATGTCCGGCGAGGAAAATGTGAGACCGAATATAAGGACTTTTAATGTACTAGTCAGAGCATGGTGTAAGAAGAAGAACATTATGGAGGCATGGAATGTGGTGCATAAGATCATAGCCTCTGGAATGCAACCTGATGCTGTTACTTACAACACATTAGCAACAGCTTATGCTCAAAATGGAGAAACATGTCAGGCCGAAGGTTTGATTGTTGAGATGCAGAACAATAGAGTGCAACCGAATGATAGAACTTGTGGCATCATCATAGGTGGGTATTGTAAAGAAGGTAAACTGAAGGAGGCCTTAAGGTTTATGCACAGGAAAGATCTTGGACTGCGTCCTAACGTTGTTGTCTTTAACTCACTGGTTAAGGGTTTTGTTGACACCATGGATAGAGACGGGGTTGATCAGGTCCTGAAGTTGATGAAAGATTTCGGGGTTAAACCGGATGTTATAACATATAGCACCATCATGAATGCATGGAGCTCAGCAGGATTCATGGAGAAGTGTAGGGAAATCTTTGATGACATGGTGAAGGCTGGCATAAAACCTGATGGGCATGTGTACAGCATTCTTGCTAAAGGTTATGTCCGAAATCAAGAAGTAGAGAAAGCCGAAGAGCTGTTGACAGCCATGATTAAAGCAGGAGTTCATCCAAACGTTGTGATTTTCACGACCATCATGAGTGGATGGTGCAGTTCTGGCAGAATGGAGCATGCAATCAAAGTTTTTGATAAAATGTGTGAATATAGCATTTCTCCCAATTTGAAGACATTTGAGACCCTGATATGGGGATTTGGAGAAGCAAAGCTGCCGTGGAAAGCTGAAGAAATACTCCAGATTATGAAGGAGTTTGGTGTTCAGCCAGAGAAATCTACTGTCTTGCTTGTTGCAGATGCTTGGCGTTCAATTGGATTAACAAAAGAGGCAAATAGGATGCTGGGTGTTCTGAAAACTAAAGAAAAGACCAACCAGGTGAAAACAGAAGAGATGCCCTTTGAGAGCTTGGAGAAAATTTATCAAAAGAAATCTGCTAATGCCTATCAGCCCAATATTCTCCAGATACCACCAGTAGTTACAAATGATCAAAAAGGGCCAGCTTCAGCAACTAGGAAAGGCACAATGATGATGAGAGATGGTGATTTTTCATTAGAGATCTCATCACTTGCTGCAAAATCTATGAATCTGTCTCATACTTGTAAATTTGGGGAAAGATTGCCGATCATATGCCAGAAGCAGTCTCGTGGGCAGCTTGGTGTGTATGGTCAGTTTCCACAGTCATGTACAGTTGTGTTCTTGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005798 GO:0005886 GO:0005887 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0016020 GO:0016021 GO:0016787 GO:0019538 GO:0031224 GO:0031226 GO:0031410 GO:0031982 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0070011 GO:0071704 GO:0071944 GO:0097708 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04310 ko04330 ko04722 ko05010 ko05165 map04310 map04330 map04722 map05010 map05165

Pfam Domains

Protein Families

Presenilin

Protein Analysis

636

Amino Acids

71.42

Weight (kDa)

8.73

Isoelectric Point (pI)

36.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	95 - 153	8.4e-08	Pentatricopeptide repeat domain
TPR_24	PF23276	129 - 236	3.1e-09	Fungal tetratrico peptide repeats
PPR_2	PF13041	141 - 188	3.6e-14	PPR repeat family
PPR	PF01535	146 - 174	4.8e-06	PPR repeat
PPR_3	PF13812	146 - 189	1e-08	Pentatricopeptide repeat domain
PPR_long	PF17177	168 - 264	4.9e-07	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	173 - 204	6.1e-07	PPR repeat
PPR_2	PF13041	176 - 226	2.3e-10	PPR repeat family
PPR	PF01535	179 - 205	1.9e-06	PPR repeat
PPR_2	PF13041	212 - 260	2e-10	PPR repeat family
PPR_3	PF13812	236 - 294	5.5e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	247 - 296	6.8e-11	PPR repeat family
PPR_2	PF13041	286 - 329	4.8e-07	PPR repeat family
PPR_long	PF17177	308 - 394	4e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	310 - 363	2.1e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	316 - 362	9.2e-09	PPR repeat family
PPR_2	PF13041	351 - 399	1.2e-11	PPR repeat family
PPR_long	PF17177	372 - 449	4.3e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	375 - 431	1.8e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	418 - 449	1.5e-10	PPR repeat
PPR_2	PF13041	421 - 468	2.7e-13	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0007322)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29900
fragaria_vesca	FvH4_5g13800 FvH4_5g13800
malus_domestica	MD06G1225300.v1.1 MD14G1212200.v1.1
prunus_persica	Prupe.5G205400_v2.0.a1
pyrus_communis	pycom06g17980 pycom14g17580 pycom15g04200
rosa_chinensis	RchiOBHm_Chr7g0183141
rosa_laevigata	RLG00000005075 RLG00000009030
rosa_multiflora	Rmu_sc0001023.1_g000022 Rmu_ssc0000111.1_g000011
rosa_roxburghii	Rroxscaffold_3G00270720 Rroxscaffold_6G00424050
rosa_rugosa	Rorug06G0453800
rosa_samantha	Rh3DG071900 Rh4BG110000 Rh4CG124300 Rh7AG056500 Rh7BG055800 Rh7CG057200 Rh7DG056100
rosa_wichuraiana	Rw7G004610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1061
AccIII	TCCGGA	1 cut(s)	118
AciI	CCGC	1 cut(s)	266
AclI	AACGTT	2 cut(s)	951, 1266
AcsI	RAATTY	4 cut(s)	31, 111, 1620, 1808
AcuI	CTGAAG	6 cut(s)	483, 603, 920, 1043, 1452, 1692
AfaI	GTAC	4 cut(s)	332, 657, 1172, 1891
AfiI	CCNNNNNNNGG	2 cut(s)	1395, 1396
AflII	CTTAAG	1 cut(s)	910
AflIII	ACRYGT	2 cut(s)	85, 794
AhlI	ACTAGT	1 cut(s)	658
AjiI	CACGTC	1 cut(s)	86
AjnI	CCWGG	1 cut(s)	1578
AluBI	AGCT	9 cut(s)	467, 773, 1092, 1228, 1417, 1430, 1611, 1706, 1858
AluI	AGCT	9 cut(s)	467, 773, 1092, 1228, 1417, 1430, 1611, 1706, 1858
Alw21I	GWGCWC	1 cut(s)	1094
Alw26I	GTCTC	5 cut(s)	625, 996, 1379, 1800, 1851
AlwNI	CAGNNNCTG	1 cut(s)	1021
Aor13HI	TCCGGA	1 cut(s)	118
AoxI	GGCC	3 cut(s)	801, 906, 1700
ApeKI	GCWGC	3 cut(s)	1417, 1775, 1855
ApoI	RAATTY	4 cut(s)	31, 111, 1620, 1808
AseI	ATTAAT	2 cut(s)	248, 450
Asp700I	GAANNNNTTC	2 cut(s)	368, 1037
AspS9I	GGNCC	3 cut(s)	274, 1018, 1700
AsuHPI	GGTGA	3 cut(s)	1150, 1594, 1757
AvaII	GGWCC	2 cut(s)	274, 1018
BanII	GRGCYC	1 cut(s)	1094
BauI	CACGAG	1 cut(s)	1848
BbsI	GAAGAC	1 cut(s)	1382
Bbv12I	GWGCWC	1 cut(s)	1094
BbvI	GCAGC	3 cut(s)	1404, 1762, 1867
BccI	CCATC	7 cut(s)	325, 365, 1082, 1154, 1290, 1292, 1736
BceAI	ACGGC	1 cut(s)	1405
BciT130I	CCWGG	1 cut(s)	1580
BclI	TGATCA	3 cut(s)	552, 1012, 1690
BcoDI	GTCTC	5 cut(s)	625, 996, 1379, 1800, 1851
BcuI	ACTAGT	1 cut(s)	658
BfaI	CTAG	4 cut(s)	42, 534, 659, 1716
BfrI	CTTAAG	1 cut(s)	910
BglII	AGATCT	2 cut(s)	931, 1761
BisI	GCNGC	4 cut(s)	266, 1418, 1776, 1856
BlpI	GCTNAGC	1 cut(s)	1093
BlsI	GCNGC	4 cut(s)	267, 1419, 1777, 1857
Bme1390I	CCNGG	1 cut(s)	1580
Bme18I	GGWCC	2 cut(s)	274, 1018
BmgBI	CACGTC	1 cut(s)	86
BmgT120I	GGNCC	3 cut(s)	274, 1018, 1700
BmrFI	CCNGG	1 cut(s)	1580
BmsI	GCATC	7 cut(s)	148, 733, 813, 873, 1492, 1533, 1587
BpiI	GAAGAC	1 cut(s)	1382
BpmI	CTGGAG	2 cut(s)	1427, 1649
Bpu1102I	GCTNAGC	1 cut(s)	1093
BpuEI	CTTGAG	1 cut(s)	623
BsaBI	GATNNNNATC	1 cut(s)	129
BsaI	GGTCTC	2 cut(s)	625, 1379
BsaJI	CCNNGG	3 cut(s)	486, 993, 1421
BsaWI	WCCGGW	2 cut(s)	118, 1051
BsaXI	ACNNNNNCTCC	2 cut(s)	263, 293
Bsc4I	CCNNNNNNNGG	2 cut(s)	1395, 1396
Bse1I	ACTGG	3 cut(s)	277, 975, 1676
Bse3DI	GCAATG	1 cut(s)	178
Bse8I	GATNNNNATC	1 cut(s)	129
BseAI	TCCGGA	1 cut(s)	118
BseBI	CCWGG	1 cut(s)	1580
BseDI	CCNNGG	3 cut(s)	486, 993, 1421
BseGI	GGATG	6 cut(s)	127, 357, 1060, 1258, 1301, 1548
BseJI	GATNNNNATC	1 cut(s)	129
BseLI	CCNNNNNNNGG	2 cut(s)	1395, 1396
BseMI	GCAATG	1 cut(s)	178
BseMII	CTCAG	1 cut(s)	1107
BseNI	ACTGG	3 cut(s)	277, 975, 1676
BseXI	GCAGC	3 cut(s)	1404, 1762, 1867
BseYI	CCCAGC	2 cut(s)	467, 1546
BsgI	GTGCAG	1 cut(s)	1321
BshFI	GGCC	3 cut(s)	803, 908, 1702
BsiHKAI	GWGCWC	1 cut(s)	1094
BsiSI	CCGG	3 cut(s)	119, 615, 1052
BslI	CCNNNNNNNGG	2 cut(s)	1395, 1396
BsmAI	GTCTC	5 cut(s)	625, 996, 1379, 1800, 1851
BsmBI	CGTCTC	1 cut(s)	996
BsmI	GAATGC	3 cut(s)	738, 1087, 1176
BsnI	GGCC	3 cut(s)	803, 908, 1702
Bso31I	GGTCTC	2 cut(s)	625, 1379
Bsp1286I	GDGCHC	1 cut(s)	1094
Bsp13I	TCCGGA	1 cut(s)	118
Bsp1407I	TGTACA	2 cut(s)	1170, 1889
Bsp143I	GATC	7 cut(s)	552, 717, 931, 1012, 1690, 1761, 1827
Bsp1720I	GCTNAGC	1 cut(s)	1093
Bsp19I	CCATGG	2 cut(s)	486, 993
BspACI	CCGC	1 cut(s)	266
BspANI	GGCC	3 cut(s)	803, 908, 1702
BspCNI	CTCAG	1 cut(s)	1106
BspEI	TCCGGA	1 cut(s)	118
BspHI	TCATGA	2 cut(s)	1077, 1287
BspQI	GCTCTTC	1 cut(s)	1218
BspTI	CTTAAG	1 cut(s)	910
BspTNI	GGTCTC	2 cut(s)	625, 1379
BsrDI	GCAATG	1 cut(s)	178
BsrGI	TGTACA	2 cut(s)	1170, 1889
BsrI	ACTGG	3 cut(s)	277, 975, 1676
BssECI	CCNNGG	3 cut(s)	486, 993, 1421
BssMI	GATC	7 cut(s)	552, 717, 931, 1012, 1690, 1761, 1827
BssSI	CACGAG	1 cut(s)	1848
BssT1I	CCWWGG	2 cut(s)	486, 993
Bst2BI	CACGAG	1 cut(s)	1848
Bst2UI	CCWGG	1 cut(s)	1580
Bst4CI	ACNGT	4 cut(s)	496, 1486, 1884, 1894
Bst6I	CTCTTC	4 cut(s)	399, 579, 1218, 1587
BstAFI	CTTAAG	1 cut(s)	910
BstAUI	TGTACA	2 cut(s)	1170, 1889
BstC8I	GCNNGC	3 cut(s)	1147, 1323, 1704
BstDEI	CTNAG	1 cut(s)	1093
BstDSI	CCRYGG	3 cut(s)	486, 993, 1421
BstF5I	GGATG	6 cut(s)	127, 357, 1060, 1258, 1301, 1548
BstKTI	GATC	7 cut(s)	555, 720, 934, 1015, 1693, 1764, 1830
BstMAI	GTCTC	5 cut(s)	625, 996, 1379, 1800, 1851
BstMBI	GATC	7 cut(s)	552, 717, 931, 1012, 1690, 1761, 1827
BstMWI	GCNNNNNNNGC	2 cut(s)	189, 1308
BstNI	CCWGG	1 cut(s)	1580
BstNSI	RCATGY	3 cut(s)	798, 1169, 1325
BstSCI	CCNGG	1 cut(s)	1578
BstV1I	GCAGC	3 cut(s)	1404, 1762, 1867
BstV2I	GAAGAC	1 cut(s)	1382
BstX2I	RGATCY	2 cut(s)	931, 1761
BstYI	RGATCY	2 cut(s)	931, 1761
BsuRI	GGCC	3 cut(s)	803, 908, 1702
BtgI	CCRYGG	3 cut(s)	486, 993, 1421
BtrI	CACGTC	1 cut(s)	86
BtsCI	GGATG	6 cut(s)	127, 357, 1060, 1258, 1301, 1548
BtsIMutI	CAGTG	1 cut(s)	968
Cac8I	GCNNGC	3 cut(s)	1147, 1323, 1704
CaiI	CAGNNNCTG	1 cut(s)	1021
CciI	TCATGA	2 cut(s)	1077, 1287
Cfr13I	GGNCC	3 cut(s)	274, 1018, 1700
CseI	GACGC	1 cut(s)	932
CsiI	ACCWGGT	1 cut(s)	1578
Csp6I	GTAC	4 cut(s)	331, 656, 1171, 1890
CviQI	GTAC	4 cut(s)	331, 656, 1171, 1890
DdeI	CTNAG	1 cut(s)	1093
DpnI	GATC	7 cut(s)	554, 719, 933, 1014, 1692, 1763, 1829
DpnII	GATC	7 cut(s)	552, 717, 931, 1012, 1690, 1761, 1827
Eam1104I	CTCTTC	4 cut(s)	399, 579, 1218, 1587
EarI	CTCTTC	4 cut(s)	399, 579, 1218, 1587
Ecl136II	GAGCTC	1 cut(s)	1092
Eco130I	CCWWGG	2 cut(s)	486, 993
Eco147I	AGGCCT	1 cut(s)	908
Eco24I	GRGCYC	1 cut(s)	1094
Eco31I	GGTCTC	2 cut(s)	625, 1379
Eco32I	GATATC	1 cut(s)	327
Eco47I	GGWCC	2 cut(s)	274, 1018
Eco53kI	GAGCTC	1 cut(s)	1092
Eco57I	CTGAAG	6 cut(s)	483, 603, 920, 1043, 1452, 1692
EcoICRI	GAGCTC	1 cut(s)	1092
EcoO109I	RGGNCCY	1 cut(s)	1018
EcoRI	GAATTC	1 cut(s)	31
EcoRII	CCWGG	1 cut(s)	1578
EcoRV	GATATC	1 cut(s)	327
EcoT14I	CCWWGG	2 cut(s)	486, 993
EcoT22I	ATGCAT	2 cut(s)	194, 1087
EcoT38I	GRGCYC	1 cut(s)	1094
ErhI	CCWWGG	2 cut(s)	486, 993
Esp3I	CGTCTC	1 cut(s)	996
FalI	AAGNNNNNCTT	2 cut(s)	893, 925
FauNDI	CATATG	2 cut(s)	9, 1832
FbaI	TGATCA	3 cut(s)	552, 1012, 1690
Fnu4HI	GCNGC	4 cut(s)	266, 1418, 1776, 1856
FokI	GGATG	6 cut(s)	134, 344, 1067, 1245, 1308, 1555
FriOI	GRGCYC	1 cut(s)	1094
Fsp4HI	GCNGC	4 cut(s)	266, 1418, 1776, 1856
FspBI	CTAG	4 cut(s)	42, 534, 659, 1716
GluI	GCNGC	4 cut(s)	266, 1418, 1776, 1856
GsaI	CCCAGC	2 cut(s)	471, 1550
GsuI	CTGGAG	2 cut(s)	1427, 1649
HaeIII	GGCC	3 cut(s)	803, 908, 1702
HapII	CCGG	3 cut(s)	119, 615, 1052
HgaI	GACGC	1 cut(s)	932
HincII	GTYRAC	2 cut(s)	988, 1233
HindII	GTYRAC	2 cut(s)	988, 1233
HinfI	GANTC	9 cut(s)	130, 146, 161, 169, 374, 425, 587, 1101, 1789
HpaII	CCGG	3 cut(s)	119, 615, 1052
HphI	GGTGA	3 cut(s)	1150, 1594, 1757
Hpy166II	GTNNAC	5 cut(s)	333, 896, 988, 1171, 1233
Hpy188I	TCNGA	5 cut(s)	463, 501, 665, 1199, 1557
Hpy8I	GTNNAC	5 cut(s)	333, 896, 988, 1171, 1233
HpyAV	CCTTC	8 cut(s)	299, 393, 502, 800, 884, 895, 1135, 1447
HpyCH4III	ACNGT	4 cut(s)	496, 1486, 1884, 1894
HpyCH4IV	ACGT	3 cut(s)	85, 951, 1266
HpyF10VI	GCNNNNNNNGC	2 cut(s)	189, 1308
HpyF3I	CTNAG	1 cut(s)	1093
HpySE526I	ACGT	3 cut(s)	85, 951, 1266
Kpn2I	TCCGGA	1 cut(s)	118
Ksp22I	TGATCA	3 cut(s)	552, 1012, 1690
Kzo9I	GATC	7 cut(s)	552, 717, 931, 1012, 1690, 1761, 1827
LguI	GCTCTTC	1 cut(s)	1218
LmnI	GCTCC	2 cut(s)	1089, 1318
Lsp1109I	GCAGC	3 cut(s)	1404, 1762, 1867
LweI	GCATC	7 cut(s)	148, 733, 813, 873, 1492, 1533, 1587
MabI	ACCWGGT	1 cut(s)	1578
MaeI	CTAG	4 cut(s)	42, 534, 659, 1716
MaeII	ACGT	3 cut(s)	85, 951, 1266
MaeIII	GTNAC	2 cut(s)	748, 1681
MalI	GATC	7 cut(s)	554, 719, 933, 1014, 1692, 1763, 1829
MboI	GATC	7 cut(s)	552, 717, 931, 1012, 1690, 1761, 1827
MfeI	CAATTG	1 cut(s)	1515
MflI	RGATCY	2 cut(s)	931, 1761
MhlI	GDGCHC	1 cut(s)	1094
MluCI	AATT	8 cut(s)	31, 111, 213, 297, 1369, 1515, 1620, 1808
MlyI	GAGTC	3 cut(s)	178, 383, 596
MnlI	CCTC	8 cut(s)	265, 350, 472, 613, 688, 736, 898, 1525
Mph1103I	ATGCAT	2 cut(s)	194, 1087
MroI	TCCGGA	1 cut(s)	118
MroXI	GAANNNNTTC	2 cut(s)	368, 1037
MslI	CAYNNNNRTG	3 cut(s)	1076, 1730, 1885
MspCI	CTTAAG	1 cut(s)	910
MspI	CCGG	3 cut(s)	119, 615, 1052
MspR9I	CCNGG	1 cut(s)	1580
MunI	CAATTG	1 cut(s)	1515
Mva1269I	GAATGC	3 cut(s)	738, 1087, 1176
MvaI	CCWGG	1 cut(s)	1580
MwoI	GCNNNNNNNGC	2 cut(s)	189, 1308
NcoI	CCATGG	2 cut(s)	486, 993
NdeI	CATATG	2 cut(s)	9, 1832
NdeII	GATC	7 cut(s)	552, 717, 931, 1012, 1690, 1761, 1827
NsiI	ATGCAT	2 cut(s)	194, 1087
NspI	RCATGY	3 cut(s)	798, 1169, 1325
PaeI	GCATGC	1 cut(s)	1325
PagI	TCATGA	2 cut(s)	1077, 1287
PceI	AGGCCT	1 cut(s)	908
PciI	ACATGT	1 cut(s)	794
PciSI	GCTCTTC	1 cut(s)	1218
PctI	GAATGC	3 cut(s)	738, 1087, 1176
PdmI	GAANNNNTTC	2 cut(s)	368, 1037
PfeI	GAWTC	6 cut(s)	130, 146, 161, 425, 1101, 1789
PflFI	GACNNNGTC	1 cut(s)	942
PkrI	GCNGC	4 cut(s)	267, 1419, 1777, 1857
PleI	GAGTC	3 cut(s)	177, 382, 595
PpsI	GAGTC	3 cut(s)	177, 382, 595
PpuMI	RGGWCCY	1 cut(s)	1018
PscI	ACATGT	1 cut(s)	794
PshBI	ATTAAT	2 cut(s)	248, 450
PsiI	TTATAA	1 cut(s)	1061
Psp124BI	GAGCTC	1 cut(s)	1094
Psp1406I	AACGTT	2 cut(s)	951, 1266
Psp5II	RGGWCCY	1 cut(s)	1018
Psp6I	CCWGG	1 cut(s)	1578
PspFI	CCCAGC	2 cut(s)	467, 1546
PspGI	CCWGG	1 cut(s)	1578
PspPI	GGNCC	3 cut(s)	274, 1018, 1700
PspPPI	RGGWCCY	1 cut(s)	1018
PstNI	CAGNNNCTG	1 cut(s)	1021
PsuI	RGATCY	2 cut(s)	931, 1761
PsyI	GACNNNGTC	1 cut(s)	942
RsaI	GTAC	4 cut(s)	332, 657, 1172, 1891
RsaNI	GTAC	4 cut(s)	331, 656, 1171, 1890
RseI	CAYNNNNRTG	3 cut(s)	1076, 1730, 1885
SacI	GAGCTC	1 cut(s)	1094
SapI	GCTCTTC	1 cut(s)	1218
SatI	GCNGC	4 cut(s)	266, 1418, 1776, 1856
Sau3AI	GATC	7 cut(s)	552, 717, 931, 1012, 1690, 1761, 1827
Sau96I	GGNCC	3 cut(s)	274, 1018, 1700
SchI	GAGTC	3 cut(s)	178, 383, 596
ScrFI	CCNGG	1 cut(s)	1580
SduI	GDGCHC	1 cut(s)	1094
SexAI	ACCWGGT	1 cut(s)	1578
SfaNI	GCATC	7 cut(s)	148, 733, 813, 873, 1492, 1533, 1587
SinI	GGWCC	2 cut(s)	274, 1018
SmiMI	CAYNNNNRTG	3 cut(s)	1076, 1730, 1885
SmlI	CTYRAG	2 cut(s)	602, 910
SmoI	CTYRAG	2 cut(s)	602, 910
SpeI	ACTAGT	1 cut(s)	658
SphI	GCATGC	1 cut(s)	1325
Sse9I	AATT	8 cut(s)	31, 111, 213, 297, 1369, 1515, 1620, 1808
SseBI	AGGCCT	1 cut(s)	908
SsiI	CCGC	1 cut(s)	266
SspI	AATATT	1 cut(s)	1660
SspMI	CTAG	4 cut(s)	42, 534, 659, 1716
SstI	GAGCTC	1 cut(s)	1094
StuI	AGGCCT	1 cut(s)	908
StyD4I	CCNGG	1 cut(s)	1578
StyI	CCWWGG	2 cut(s)	486, 993
TaaI	ACNGT	4 cut(s)	496, 1486, 1884, 1894
TaiI	ACGT	3 cut(s)	88, 954, 1269
TaqI	TCGA	2 cut(s)	372, 428
TaqII	GACCGA	1 cut(s)	649
TasI	AATT	8 cut(s)	31, 111, 213, 297, 1369, 1515, 1620, 1808
TatI	WGTACW	3 cut(s)	655, 1170, 1889
TauI	GCSGC	1 cut(s)	268
TfiI	GAWTC	6 cut(s)	130, 146, 161, 425, 1101, 1789
TscAI	CASTG	1 cut(s)	975
TseI	GCWGC	3 cut(s)	1417, 1775, 1855
TspRI	CASTG	1 cut(s)	975
Tth111I	GACNNNGTC	1 cut(s)	942
Vha464I	CTTAAG	1 cut(s)	910
VpaK11BI	GGWCC	2 cut(s)	274, 1018
VspI	ATTAAT	2 cut(s)	248, 450
XapI	RAATTY	4 cut(s)	31, 111, 1620, 1808
XceI	RCATGY	3 cut(s)	798, 1169, 1325
XmnI	GAANNNNTTC	2 cut(s)	368, 1037
XspI	CTAG	4 cut(s)	42, 534, 659, 1716
Zsp2I	ATGCAT	2 cut(s)	194, 1087

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.