AT5G61980

ADP-ribosylation factor GTPase-activating protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0011770
Physical Location & Seq
Forward (+)
24894053 .. 24899973
5921 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G61980.1

Sequence Viewer

Length: 2487 bp
ATGCATTTCGCCAAGCTCGATGATTCTCCCATGTTTCGCCAACAGATGCAATCTATGGAAGAGAGTGCGGAGTTGCTCCGACTGCGATGCTTAAGGTTCTATAAAGGTTGCAGAAAATACACGGAGGGGCTTGGAGAAGGGTATGATGCAGATATTGGCTTTGTAAATGCACTTGAATCTTTCGGAGGAGGCCATAATGATCCTGTTTGTGTTGCTTTTGGAGGTCCTGTAATGACAAAATTCACTATTGCTCTACGAGAAATCGGGACATACAAGGAAGTACTTCGTTCTCAGGTAGAACACATGCTGAGTGATCGGTTGCTTCAATTTGTGAATGGTGATGTCCACGAAGTTAAGGAAGCTCGTAAACGGTTTGACAAAGCTACCATTACATATGATCAGGCACGAGAAAAATATCTTTCATTAAGGAAGAGCACACGATTGGATGTGGCTGCCACAATTGAGGAGGACCTACATAGCGCAAGAACGACATTTGAGCAAGCCCGGTTTCATCTGGTTAGTGCACTCTCTAATGCAGAGTCTAAAAAGAGATTTGAGTTTTTGGAAGCAGTCAGCGGGACTATGGATGCTCATCTCCGTTTCTTCAAACAGGGATATGAACTACTACATCAAATGGAGCCTTTTATTAATCAGGTGTTGGCTTATGCACACCAGTCTAGAGAATGTGCAAACTATGAGATGGCATCACTTAATGAAAGGATGCAGGAATACCAAAGGCAAGTTGATCGTGAAACTAGAAACTCCTGTGTTTCTCCAACAGGGGATGGCATGAGACATAACTCAAGAAACTCCCAGAAAGTCATCGAGGCCGTGATGCAATCTGCTGCAAAAGGAAAGGTTCAGACTATCAGACAAGGGTATCTGTCTAAACGTTCCTCAAACTTGAGAGGTGACTGGAAAAGAAGATTCTTTATCCTTGATAGCCGTGGGATGCTATACTATTACCGCAAGCCATGGAATTGGTCTTCAGGAAATGGAAGTCGCTCTGTTGTTCACAGGAATATGGCTTCAGAAAACAGTCCTGGGCTGCTAAGTCGGTGGCTGTCTTCTCATTATCATGGTGGTGTGCACGATGAAAAACCAGTGGCACGTCACACCGTCAATCTGCTGACCTCAACGATCAAAGTTGATGCAGATCAGACCGATCTAAGATTCTGCTTTAGAATAATTTCACCAACAAAAGTTTATACATTGCAGGCAGAGAATGCACAGGATCAGATGGACTGGATCGAAAAAATAACTGGAGTAATTGCTTCTTTGTTGAGTTTCCAAACACCTGAAAGAGCAATCATGCGTCTCTCTACTGTGGACGGAGGTGATACTTTCTCTGCAAGTGATTCTGGTTCTTTAGCAGATCCTTATGATATCGAACAGGCAGAAAGTGGAGAATCCACAGTGGAACATCCCATGACAGGAGGAAACCGTTCGAGGTTCTCAGGGTGCTTGCAGCAACATGATATGGTAAAGACTGAAAAGCCAATTGATGTCTTGACAAGGGTATTGGGTAATGAGAGATGTGCAGACTGCGGTGCTCCTGAACCTGATTGGGCCTCTTTGAACCTCGGTGTCCTTATTTGTATCGAGTGTTCTGGTATCCATCGTAACCTTGGTGTTCACATTTCAAAGGTCAGATCGCTCACTCTTGATGTCAAAGTATGGGAACCATCGGTCTTGACGTTATTCCAATCGTTAGGTAATGTATATGTAAACTCAGTGTGGGAGGAGCTGTTGAACTCGGAGAGTAGAACTTCCAGTGCTAGTAGATCTTCGGGCACTCCCAAGTCAGATCGACCAAGAAAGTTGCTTGTAAGGAAGCCTGGTTTCAATGATCCCATTTCGGTGAAAGAGTTGTTCATCCACGCAAAGTACTCAGAGAGGATTTTTGTCCGCAAAGCAATAGACAGTCAGCATTTTCAGGCAGTTTTCCAAGAGATATGGGAGAATGTCCGTGCCAACGACAAGAAATCAGTTTACAGGCACATTGTCTGCTCTGAAGCAGATGTGAATGCTCTACGTGGTCAAGCATCATACACTGTGTCTTTGCCCTTATCAAAGATGATGCAAATGGAGGAAACCCTTGAAGCGAAATTCAAGAGCATTGAAGAGGAGTTTCAAGAGAATCCAGCGGGATATTCTAACTCAAGAGGTGACGGGGAAAGTATGGTCAGAGAAGAAACTTCAAACGACTGTTCTTTGCTTCACCTTGCTTGTCTTTCTGCGGATATCGGTATGGTAGAACTATTGCTTCAATATGGCGCAAAAATAAATGCAACAGATTCAAAAGGTCGGACTCCACTTCATCATTGTATCATCAGCAGGAGATATGCAATTGCAAGGTTGCTACTTATGAGGGGAGGAGATCCAAATGCTGTGGATAAAGACAGTAACATACCAGTCAAATATGCTTCACAGACAGACCTCAATGATAGCGAACTGATTGCTTTATTAACAGACTCCAAAAGATGA

Protein Analysis

828

Amino Acids

93.6

Weight (kDa)

7.12

Isoelectric Point (pI)

48.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAR_3 PF16746 6 - 235 1.6e-37 BAR domain of APPL family
BAR PF03114 76 - 214 4e-10 BAR domain
PH PF00169 290 - 424 1.3e-12 PH domain
ArfGap PF01412 502 - 593 5.6e-31 Putative GTPase activating protein for Arf
Ank_2 PF12796 735 - 799 3.4e-11 Ankyrin repeats (3 copies)
Ank_4 PF13637 740 - 789 2.8e-08 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011770)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G61980
fragaria_vesca FvH4_5g09370 FvH4_5g09370 FvH4_5g09370
malus_domestica MD06G1131800.v1.1 MD14G1148100.v1.1
prunus_persica Prupe.5G142800_v2.0.a1
pyrus_communis pycom06g12340 pycom14g12290
rosa_chinensis RchiOBHm_Chr7g0188801
rosa_laevigata RLG00000004658
rosa_multiflora Rmu_sc0003642.1_g000001
rosa_roxburghii Rroxscaffold_3G00266010
rosa_rugosa Rorug06G0494100
rosa_samantha Rh7AG098800 Rh7BG100500 Rh7CG102000 Rh7DG100600
rosa_wichuraiana Rw7G008510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 7 cut(s) 68, 576, 967, 1548, 1909, 2147, 2240
AclI AACGTT 1 cut(s) 892
AclWI GGATC 6 cut(s) 194, 1242, 1256, 1370, 1844, 2375
AcsI RAATTY 2 cut(s) 239, 2108
AcuI CTGAAG 3 cut(s) 972, 1014, 2034
AfaI GTAC 2 cut(s) 282, 1889
AfiI CCNNNNNNNGG 1 cut(s) 1433
AflII CTTAAG 1 cut(s) 91
AjiI CACGTC 1 cut(s) 1112
AjnI CCWGG 2 cut(s) 1042, 1837
AluBI AGCT 4 cut(s) 16, 362, 383, 1747
AluI AGCT 4 cut(s) 16, 362, 383, 1747
Alw21I GWGCWC 4 cut(s) 437, 526, 1092, 1555
Alw26I GTCTC 2 cut(s) 787, 1322
Alw44I GTGCAC 2 cut(s) 522, 1088
AlwI GGATC 6 cut(s) 194, 1242, 1256, 1370, 1844, 2375
AoxI GGCC 3 cut(s) 190, 828, 1569
ApaLI GTGCAC 2 cut(s) 522, 1088
ApeKI GCWGC 4 cut(s) 452, 845, 1048, 1468
ApoI RAATTY 2 cut(s) 239, 2108
AseI ATTAAT 1 cut(s) 648
Asp700I GAANNNNTTC 3 cut(s) 282, 1189, 1444
AspLEI GCGC 2 cut(s) 482, 2279
AspS9I GGNCC 3 cut(s) 224, 469, 1569
AsuC2I CCSGG 1 cut(s) 505
AsuHPI GGTGA 7 cut(s) 350, 923, 1185, 1349, 1873, 2180, 2213
AvaII GGWCC 2 cut(s) 224, 469
BaeGI GKGCMC 3 cut(s) 526, 1092, 1796
BaeI ACNNNNGTAYC 2 cut(s) 863, 896
BauI CACGAG 1 cut(s) 405
BbsI GAAGAC 2 cut(s) 978, 1059
Bbv12I GWGCWC 4 cut(s) 437, 526, 1092, 1555
BbvI GCAGC 4 cut(s) 439, 832, 1035, 1480
BccI CCATC 5 cut(s) 694, 779, 1234, 1626, 1693
BceAI ACGGC 2 cut(s) 815, 930
BcgI CGANNNNNNTGC 6 cut(s) 69, 103, 728, 762, 2441, 2475
BciT130I CCWGG 2 cut(s) 1044, 1839
BciVI GTATCC 1 cut(s) 1625
BclI TGATCA 1 cut(s) 397
BcnI CCSGG 1 cut(s) 505
BcoDI GTCTC 2 cut(s) 787, 1322
BfaI CTAG 3 cut(s) 678, 756, 1779
BfrI CTTAAG 1 cut(s) 91
BfuI GTATCC 1 cut(s) 1625
BglII AGATCT 1 cut(s) 1784
BisI GCNGC 4 cut(s) 453, 846, 1049, 1469
BlsI GCNGC 4 cut(s) 454, 847, 1050, 1470
BmcAI AGTACT 2 cut(s) 282, 1889
Bme1390I CCNGG 3 cut(s) 505, 1044, 1839
Bme18I GGWCC 2 cut(s) 224, 469
BmgBI CACGTC 1 cut(s) 1112
BmgT120I GGNCC 3 cut(s) 224, 469, 1569
BmiI GGNNCC 2 cut(s) 639, 1683
BmrFI CCNGG 3 cut(s) 505, 1044, 1839
BpiI GAAGAC 2 cut(s) 978, 1059
BpmI CTGGAG 1 cut(s) 1284
BpuEI CTTGAG 3 cut(s) 787, 925, 2146
BpuMI CCSGG 1 cut(s) 505
BsaAI YACGTR 1 cut(s) 2036
BsaBI GATNNNNATC 2 cut(s) 591, 1155
BsaJI CCNNGG 5 cut(s) 946, 974, 1043, 1582, 1627
BsaXI ACNNNNNCTCC 4 cut(s) 213, 243, 1733, 1763
Bsc4I CCNNNNNNNGG 1 cut(s) 1433
Bse1I ACTGG 7 cut(s) 673, 920, 1103, 1250, 1267, 1773, 2414
Bse3DI GCAATG 1 cut(s) 1211
Bse8I GATNNNNATC 2 cut(s) 591, 1155
BseBI CCWGG 2 cut(s) 1044, 1839
BseDI CCNNGG 5 cut(s) 946, 974, 1043, 1582, 1627
BseGI GGATG 7 cut(s) 451, 592, 726, 790, 957, 1423, 1875
BseJI GATNNNNATC 2 cut(s) 591, 1155
BseLI CCNNNNNNNGG 1 cut(s) 1433
BseMI GCAATG 1 cut(s) 1211
BseMII CTCAG 5 cut(s) 299, 305, 1470, 1746, 1905
BseNI ACTGG 7 cut(s) 673, 920, 1103, 1250, 1267, 1773, 2414
BseRI GAGGAG 5 cut(s) 201, 479, 1757, 2141, 2391
BseSI GKGCMC 3 cut(s) 526, 1092, 1796
BseXI GCAGC 4 cut(s) 439, 832, 1035, 1480
BsgI GTGCAG 1 cut(s) 1560
BshFI GGCC 3 cut(s) 192, 830, 1571
BsiHKAI GWGCWC 4 cut(s) 437, 526, 1092, 1555
BsiSI CCGG 1 cut(s) 505
BslFI GGGAC 2 cut(s) 280, 592
BslI CCNNNNNNNGG 1 cut(s) 1433
BsmAI GTCTC 2 cut(s) 787, 1322
BsmBI CGTCTC 1 cut(s) 1322
BsmFI GGGAC 2 cut(s) 280, 592
BsmI GAATGC 2 cut(s) 1231, 2032
BsnI GGCC 3 cut(s) 192, 830, 1571
Bsp1286I GDGCHC 5 cut(s) 437, 526, 1092, 1555, 1796
Bsp19I CCATGG 1 cut(s) 974
BspACI CCGC 7 cut(s) 68, 576, 967, 1548, 1909, 2147, 2240
BspANI GGCC 3 cut(s) 192, 830, 1571
BspCNI CTCAG 5 cut(s) 300, 304, 1469, 1745, 1904
BspLI GGNNCC 2 cut(s) 639, 1683
BspPI GGATC 6 cut(s) 194, 1242, 1256, 1370, 1844, 2375
BspQI GCTCTTC 1 cut(s) 425
BspTI CTTAAG 1 cut(s) 91
BsrDI GCAATG 1 cut(s) 1211
BsrI ACTGG 7 cut(s) 673, 920, 1103, 1250, 1267, 1773, 2414
BssECI CCNNGG 5 cut(s) 946, 974, 1043, 1582, 1627
BssSI CACGAG 1 cut(s) 405
BssT1I CCWWGG 2 cut(s) 974, 1627
Bst2BI CACGAG 1 cut(s) 405
Bst2UI CCWGG 2 cut(s) 1044, 1839
Bst6I CTCTTC 3 cut(s) 54, 425, 2118
BstAFI CTTAAG 1 cut(s) 91
BstAPI GCANNNNNTGC 1 cut(s) 1226
BstBAI YACGTR 1 cut(s) 2036
BstC8I GCNNGC 4 cut(s) 501, 971, 1218, 1466
BstDEI CTNAG 7 cut(s) 291, 308, 1052, 1169, 1456, 1732, 1891
BstDSI CCRYGG 2 cut(s) 946, 974
BstF5I GGATG 7 cut(s) 451, 592, 726, 790, 957, 1423, 1875
BstHHI GCGC 2 cut(s) 482, 2279
BstMAI GTCTC 2 cut(s) 787, 1322
BstMWI GCNNNNNNNGC 2 cut(s) 82, 1226
BstNI CCWGG 2 cut(s) 1044, 1839
BstNSI RCATGY 1 cut(s) 307
BstSCI CCNGG 3 cut(s) 503, 1042, 1837
BstSLI GKGCMC 3 cut(s) 526, 1092, 1796
BstV1I GCAGC 4 cut(s) 439, 832, 1035, 1480
BstV2I GAAGAC 2 cut(s) 978, 1059
BstX2I RGATCY 3 cut(s) 1375, 1784, 2380
BstXI CCANNNNNNTGG 1 cut(s) 981
BstYI RGATCY 3 cut(s) 1375, 1784, 2380
BsuI GTATCC 1 cut(s) 1625
BsuRI GGCC 3 cut(s) 192, 830, 1571
BtgI CCRYGG 2 cut(s) 946, 974
BtgZI GCGATG 1 cut(s) 100
BtrI CACGTC 1 cut(s) 1112
BtsCI GGATG 7 cut(s) 451, 592, 726, 790, 957, 1423, 1875
BtsIMutI CAGTG 5 cut(s) 1110, 1422, 1740, 1780, 2052
Cac8I GCNNGC 4 cut(s) 501, 971, 1218, 1466
CfoI GCGC 2 cut(s) 482, 2279
Cfr13I GGNCC 3 cut(s) 224, 469, 1569
CseI GACGC 1 cut(s) 1304
Csp6I GTAC 2 cut(s) 281, 1888
CspCI CAANNNNNGTGG 2 cut(s) 2373, 2408
CviAII CATG 8 cut(s) 31, 304, 790, 975, 1079, 1312, 1429, 1475
CviQI GTAC 2 cut(s) 281, 1888
DdeI CTNAG 7 cut(s) 291, 308, 1052, 1169, 1456, 1732, 1891
Eam1104I CTCTTC 3 cut(s) 54, 425, 2118
EarI CTCTTC 3 cut(s) 54, 425, 2118
Eco130I CCWWGG 2 cut(s) 974, 1627
Eco32I GATATC 2 cut(s) 1387, 2245
Eco47I GGWCC 2 cut(s) 224, 469
Eco57I CTGAAG 3 cut(s) 972, 1014, 2034
EcoO109I RGGNCCY 2 cut(s) 224, 469
EcoRII CCWGG 2 cut(s) 1042, 1837
EcoRV GATATC 2 cut(s) 1387, 2245
EcoT14I CCWWGG 2 cut(s) 974, 1627
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 974, 1627
Esp3I CGTCTC 1 cut(s) 1322
FaeI CATG 8 cut(s) 34, 307, 793, 978, 1082, 1315, 1432, 1478
FaqI GGGAC 2 cut(s) 280, 592
FatI CATG 8 cut(s) 30, 303, 789, 974, 1078, 1311, 1428, 1474
FauI CCCGC 2 cut(s) 569, 2140
FauNDI CATATG 1 cut(s) 394
FbaI TGATCA 1 cut(s) 397
Fnu4HI GCNGC 4 cut(s) 453, 846, 1049, 1469
FokI GGATG 7 cut(s) 458, 599, 733, 797, 964, 1410, 1862
Fsp4HI GCNGC 4 cut(s) 453, 846, 1049, 1469
FspBI CTAG 3 cut(s) 678, 756, 1779
GlaI GCGC 2 cut(s) 481, 2278
GluI GCNGC 4 cut(s) 453, 846, 1049, 1469
GsuI CTGGAG 1 cut(s) 1284
HaeIII GGCC 3 cut(s) 192, 830, 1571
HapII CCGG 1 cut(s) 505
HgaI GACGC 1 cut(s) 1304
HhaI GCGC 2 cut(s) 482, 2279
Hin1II CATG 8 cut(s) 34, 307, 793, 978, 1082, 1315, 1432, 1478
Hin6I GCGC 2 cut(s) 480, 2277
HinP1I GCGC 2 cut(s) 480, 2277
HpaII CCGG 1 cut(s) 505
HphI GGTGA 7 cut(s) 350, 923, 1185, 1349, 1873, 2180, 2213
Hpy166II GTNNAC 9 cut(s) 346, 368, 524, 1015, 1090, 1330, 1636, 1729, 1993
Hpy8I GTNNAC 9 cut(s) 346, 368, 524, 1015, 1090, 1330, 1636, 1729, 1993
HpyAV CCTTC 1 cut(s) 131
HpyCH4IV ACGT 4 cut(s) 892, 1111, 1697, 2035
HpyF10VI GCNNNNNNNGC 2 cut(s) 82, 1226
HpyF3I CTNAG 7 cut(s) 291, 308, 1052, 1169, 1456, 1732, 1891
HpySE526I ACGT 4 cut(s) 892, 1111, 1697, 2035
Hsp92II CATG 8 cut(s) 34, 307, 793, 978, 1082, 1315, 1432, 1478
HspAI GCGC 2 cut(s) 480, 2277
Ksp22I TGATCA 1 cut(s) 397
LguI GCTCTTC 1 cut(s) 425
LmnI GCTCC 4 cut(s) 81, 637, 1558, 1744
Lsp1109I GCAGC 4 cut(s) 439, 832, 1035, 1480
MaeI CTAG 3 cut(s) 678, 756, 1779
MaeII ACGT 4 cut(s) 892, 1111, 1697, 2035
MaeIII GTNAC 5 cut(s) 911, 1112, 1622, 2168, 2405
MboII GAAGA 9 cut(s) 71, 442, 595, 936, 978, 1059, 1779, 2135, 2204
MfeI CAATTG 3 cut(s) 459, 1500, 2349
MflI RGATCY 3 cut(s) 1375, 1784, 2380
MhlI GDGCHC 5 cut(s) 437, 526, 1092, 1555, 1796
MluCI AATT 9 cut(s) 239, 326, 459, 979, 1188, 1269, 1500, 2108, 2349
MlyI GAGTC 3 cut(s) 548, 2305, 2468
MmeI TCCRAC 3 cut(s) 103, 800, 2288
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 3 cut(s) 282, 1189, 1444
MseI TTAA 6 cut(s) 92, 354, 425, 648, 711, 2468
MslI CAYNNNNRTG 3 cut(s) 1077, 1083, 1859
MspA1I CMGCKG 2 cut(s) 576, 2147
MspCI CTTAAG 1 cut(s) 91
MspI CCGG 1 cut(s) 505
MspR9I CCNGG 3 cut(s) 505, 1044, 1839
MunI CAATTG 3 cut(s) 459, 1500, 2349
Mva1269I GAATGC 2 cut(s) 1231, 2032
MvaI CCWGG 2 cut(s) 1044, 1839
MwoI GCNNNNNNNGC 2 cut(s) 82, 1226
NciI CCSGG 1 cut(s) 505
NcoI CCATGG 1 cut(s) 974
NdeI CATATG 1 cut(s) 394
NlaIII CATG 8 cut(s) 34, 307, 793, 978, 1082, 1315, 1432, 1478
NlaIV GGNNCC 2 cut(s) 639, 1683
NmuCI GTSAC 3 cut(s) 911, 1112, 2168
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 307
PciSI GCTCTTC 1 cut(s) 425
PcsI WCGNNNNNNNCGW 2 cut(s) 15, 1694
PctI GAATGC 2 cut(s) 1231, 2032
PdmI GAANNNNTTC 3 cut(s) 282, 1189, 1444
PfeI GAWTC 8 cut(s) 23, 176, 927, 1173, 1358, 1409, 2140, 2297
PkrI GCNGC 4 cut(s) 454, 847, 1050, 1470
PleI GAGTC 3 cut(s) 547, 2305, 2468
PpsI GAGTC 3 cut(s) 547, 2305, 2468
Ppu21I YACGTR 1 cut(s) 2036
PpuMI RGGWCCY 2 cut(s) 224, 469
PshBI ATTAAT 1 cut(s) 648
Psp1406I AACGTT 1 cut(s) 892
Psp5II RGGWCCY 2 cut(s) 224, 469
Psp6I CCWGG 2 cut(s) 1042, 1837
PspGI CCWGG 2 cut(s) 1042, 1837
PspN4I GGNNCC 2 cut(s) 639, 1683
PspPI GGNCC 3 cut(s) 224, 469, 1569
PspPPI RGGWCCY 2 cut(s) 224, 469
PsrI GAACNNNNNNTAC 2 cut(s) 1591, 1623
PsuI RGATCY 3 cut(s) 1375, 1784, 2380
RsaI GTAC 2 cut(s) 282, 1889
RsaNI GTAC 2 cut(s) 281, 1888
RseI CAYNNNNRTG 3 cut(s) 1077, 1083, 1859
SapI GCTCTTC 1 cut(s) 425
SaqAI TTAA 6 cut(s) 92, 354, 425, 648, 711, 2468
SatI GCNGC 4 cut(s) 453, 846, 1049, 1469
Sau96I GGNCC 3 cut(s) 224, 469, 1569
ScaI AGTACT 2 cut(s) 282, 1889
SchI GAGTC 3 cut(s) 548, 2305, 2468
ScrFI CCNGG 3 cut(s) 505, 1044, 1839
SduI GDGCHC 5 cut(s) 437, 526, 1092, 1555, 1796
SinI GGWCC 2 cut(s) 224, 469
SmiMI CAYNNNNRTG 3 cut(s) 1077, 1083, 1859
SmlI CTYRAG 4 cut(s) 91, 802, 904, 2161
SmoI CTYRAG 4 cut(s) 91, 802, 904, 2161
Sse9I AATT 9 cut(s) 239, 326, 459, 979, 1188, 1269, 1500, 2108, 2349
SsiI CCGC 7 cut(s) 68, 576, 967, 1548, 1909, 2147, 2240
SspMI CTAG 3 cut(s) 678, 756, 1779
StyD4I CCNGG 3 cut(s) 503, 1042, 1837
StyI CCWWGG 2 cut(s) 974, 1627
TaiI ACGT 4 cut(s) 895, 1114, 1700, 2038
TaqI TCGA 7 cut(s) 18, 825, 1251, 1389, 1448, 1602, 1810
TaqII GACCGA 2 cut(s) 1178, 1678
TasI AATT 9 cut(s) 239, 326, 459, 979, 1188, 1269, 1500, 2108, 2349
TatI WGTACW 2 cut(s) 280, 1887
TfiI GAWTC 8 cut(s) 23, 176, 927, 1173, 1358, 1409, 2140, 2297
Tru1I TTAA 6 cut(s) 92, 354, 425, 648, 711, 2468
Tru9I TTAA 6 cut(s) 92, 354, 425, 648, 711, 2468
TscAI CASTG 5 cut(s) 1110, 1422, 1740, 1780, 2059
TseFI GTSAC 3 cut(s) 911, 1112, 2168
TseI GCWGC 4 cut(s) 452, 845, 1048, 1468
Tsp45I GTSAC 3 cut(s) 911, 1112, 2168
TspDTI ATGAA 7 cut(s) 411, 500, 633, 729, 1110, 1864, 2309
TspGWI ACGGA 4 cut(s) 137, 587, 1347, 1958
TspRI CASTG 5 cut(s) 1110, 1422, 1740, 1780, 2059
Vha464I CTTAAG 1 cut(s) 91
VneI GTGCAC 2 cut(s) 522, 1088
VpaK11BI GGWCC 2 cut(s) 224, 469
VspI ATTAAT 1 cut(s) 648
XapI RAATTY 2 cut(s) 239, 2108
XbaI TCTAGA 1 cut(s) 677
XceI RCATGY 1 cut(s) 307
XcmI CCANNNNNNNNNTGG 1 cut(s) 1625
XmnI GAANNNNTTC 3 cut(s) 282, 1189, 1444
XspI CTAG 3 cut(s) 678, 756, 1779
ZrmI AGTACT 2 cut(s) 282, 1889
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.