FvH4_5g09370

ADP-ribosylation factor GTPase-activating protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0011770
Physical Location & Seq
Reverse (-)
5407457 .. 5414685
7229 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g09370.t1

Sequence Viewer

Length: 2409 bp
ATGACTTTCGCAAAGCTCGATGATTCGCCAATGTTCCGCCAGCAGTTGCATGGCTTGGAAGAAGGAGCAGAGGCATTTAGGGGAAGATGTTCTAAGTTTTACAAAGCATGTCGAAAGTACACAGAAGGGCTTGGAGAAGCTTACGATGGGGAAATCGCTTTTGCAACTGCCCTTGAAACTTTTGGCGGAGGGCATAATGATCCTATATTTGCAGCTATGGGGGGTCATTTTATGACGAGATTCACAATTGCATTGAGAGAAATTGGAACATACAAGGAAGTTTTGCGGTCACAGGTAGAGCACATGCTAAATGATAGGCTGCTGCAATTTGTAAATGTTGACCTCCATGATGTCAAGGAAGCCAGAAAGCGTTTTGATAAGACTTCACTTATATATGATCAGGCACGTGAGAAGTTTTTGTCGTTGAGGAAGAGCACTAGAATGGATATAGCTGCTAGTATAGAGGAGGAACTGAATAATGCAAGATCCTCATTTGAGCAAGCCCGCTTCAACCTGGCTACTGCTCTCTCTGAAATTGAGGCCAAAAAGAAGTTTGAGTTTCACGAAGCTGTTAGTGGGGTGATGGATGCTCATCTTCGTTACTTCAAACAGGGATATGAGCTACTGTACACAATGGAACCGTATATTCATCAGGTTTTGGATTATGCACAACAGACTAGAGAAAGTTGCAACGAGGAACAGACAATTCTCAATGAAAGAATACTAGAGTACAGGAGGCAGATTGATAGGGAAAGCAGGCAGTCCTTACGTGGTTGTCATGGTTCTGTTAGTGGAGATAGTCTGCAGCCTTTGGCTAGAAGATCAAATAAAGTGATAGAGGAAGTGATGCAATCTGCTGCAAAGGGGAAGATTCAAACCATTCGTCAAGGATATCTCTCAAAACGGTCATCCAATCTGAGAGGTGACTGGAAAAGAAGGTACTTCATTCTTGATAGTCGAGGGATGCTGTATTACTATCGAAAACCATGGAACTGGTCATCTTCTCCACAGAAGAATAATTCCTCTGAGAATGGCACTGGGATTTTGAGTCGATGGCTTTCTTCCCACTATCATGGTGGAGTGCATGATGAAAAATCCGTTGCACGTCACACTGTCAACTTGCTGACATCGACAATAAAGGTTGATGCAGACCAGACAGACTTAAGGTTCTGCTTCAGGATTATATCACCTTCAAAGATTTACACTTTGCAGGCAGAGAATGCACTTGACCAAATGGATTGGATTGAGAAAATAACTGGAGTAATTTCTTCATTATTGAGTTTCCAGGCACCTGAGAGGCGTCTGTCAACTAGCCAAGCGAGTAGCGAGGATCAATTCTCTGCAAGCGAGATCAACTCATTAGAAACTTACCCTGATGTTGATCAGACAGCCATTCAGGACCAATCACCAAGAATCTTCACTAATAATTATTTTCGTGCCTACAAAAGTTTGCAACCTTATAAGCCGAGTGTGAAGACTGAGAAGCCAATTGACATATTGAGAAGAGTACGTGGTAATGACAAGTGTGCTGATTGTGGGGCACCTGAACCAGATTGGGCATCCTTAAACCTTGGTATTCTTATTTGCATTGAATGTTCTGGTGTTCATCGCAATCTTGGTGTACATGTATCAAAGGTTAGATCACTGACACTTGATGTGAAAGTATGGGAACCTTCTGTCTTAACCTTGTTTCAATCTCTGGGGAATGCTTTTGCAAACTCGATTTGGGAGAAGATGTTGCCTTCAAAAAGTACTTCACTGTCTGATGATATTCTTACTGGTTTTATCAAGTCTGATAGAAATTCAATTGATCAATCTCTGGTGACAAAACCCTGTTATGATGATATGATTTCAGTAAAGGAGAGATTCATTCAAGCAAAGTATGCAGAAAAGCGTTTTGTTTGTCCCAGACAGATCAGTCAGAAACTCCACCCTGTGGAGCAACAGTTGTGGAAAAGCGTCTATACGAATGACAAGCAAGCTGTTTACCGCTATATTGTAAGCTTTGAAGCTGATATTAATGAGGCTTGTGGGAGAGCATCATGTGACAATTCTACAGACAAGCCTTCCTCAAGTAGTTCAAATTTATCAAGTAAAAGAGAAGATAGCCTCATAGAAAACATCGCTGAGGGTTGTTCCCTGCTTCACATAGCCTGCCAAGTTGCTGATATTGGCATGGTAGAGCTACTTTTACAGTATGGTGCAAATATAAACGCTTCTGATTTGAAAGGCCAAACGCCACTCCATTATTGTGTTATGAGAGGGAATCCTGCTATTACAAAGATGCTTCTCATGAGAGGAGCAGATCCTCAAGCCACTGACAGAGAAGGTAAAACACCAAGTAAGCTTGTATCAGAATCAGCCGTAAATGACAATGGGATGCTTTCTATGCTAAACACAGGCAGGTGA

Protein Analysis

803

Amino Acids

90.97

Weight (kDa)

8.01

Isoelectric Point (pI)

52.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAR_3 PF16746 6 - 235 1.9e-37 BAR domain of APPL family
BAR PF03114 67 - 216 1.7e-13 BAR domain
PH PF00169 294 - 422 5.7e-12 PH domain
ArfGap PF01412 497 - 586 7.5e-32 Putative GTPase activating protein for Arf
Ank_2 PF12796 708 - 774 2.7e-12 Ankyrin repeats (3 copies)
Ank PF00023 711 - 741 5.5e-06 Ankyrin repeat
Ank_4 PF13637 715 - 764 2.5e-10 Ankyrin repeats (many copies)
Ank_5 PF13857 730 - 780 3.4e-08 Ankyrin repeats (many copies)
Ank PF00023 744 - 775 2e-07 Ankyrin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011770)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G61980
fragaria_vesca FvH4_5g09370 FvH4_5g09370 FvH4_5g09370
malus_domestica MD06G1131800.v1.1 MD14G1148100.v1.1
prunus_persica Prupe.5G142800_v2.0.a1
pyrus_communis pycom06g12340 pycom14g12290
rosa_chinensis RchiOBHm_Chr7g0188801
rosa_laevigata RLG00000004658
rosa_multiflora Rmu_sc0003642.1_g000001
rosa_roxburghii Rroxscaffold_3G00266010
rosa_rugosa Rorug06G0494100
rosa_samantha Rh7AG098800 Rh7BG100500 Rh7CG102000 Rh7DG100600
rosa_wichuraiana Rw7G008510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1461
AarI CACCTGC 1 cut(s) 2394
AasI GACNNNNNNGTC 1 cut(s) 1917
Acc36I ACCTGC 1 cut(s) 2394
AccB1I GGYRCC 2 cut(s) 1288, 1540
AccB7I CCANNNNNTGG 1 cut(s) 1936
AciI CCGC 5 cut(s) 37, 186, 286, 505, 1990
AclWI GGATC 4 cut(s) 194, 480, 1338, 2300
AcsI RAATTY 2 cut(s) 1801, 2083
AcuI CTGAAG 1 cut(s) 1159
AcvI CACGTG 1 cut(s) 407
AcyI GRCGYC 1 cut(s) 1300
AdeI CACNNNGTG 1 cut(s) 1936
AfaI GTAC 7 cut(s) 119, 629, 731, 941, 1509, 1623, 1753
AfiI CCNNNNNNNGG 1 cut(s) 1936
AflII CTTAAG 1 cut(s) 1162
AflIII ACRYGT 1 cut(s) 1624
AjiI CACGTC 1 cut(s) 1106
AjnI CCWGG 2 cut(s) 513, 1284
Alw21I GWGCWC 2 cut(s) 303, 437
AlwI GGATC 4 cut(s) 194, 480, 1338, 2300
AoxI GGCC 2 cut(s) 540, 2230
ApeKI GCWGC 6 cut(s) 212, 319, 322, 452, 805, 857
ApoI RAATTY 2 cut(s) 1801, 2083
ArsI GACNNNNNNTTYG 2 cut(s) 868, 900
AseI ATTAAT 1 cut(s) 2019
Asp700I GAANNNNTTC 1 cut(s) 88
AspS9I GGNCC 1 cut(s) 1399
AsuHPI GGTGA 5 cut(s) 592, 935, 1179, 1398, 1834
AvaII GGWCC 1 cut(s) 1399
BaeGI GKGCMC 1 cut(s) 1543
BanI GGYRCC 2 cut(s) 1288, 1540
BbrPI CACGTG 1 cut(s) 407
BbsI GAAGAC 1 cut(s) 1481
Bbv12I GWGCWC 2 cut(s) 303, 437
BbvCI CCTCAGC 1 cut(s) 2127
BbvI GCAGC 6 cut(s) 224, 306, 309, 439, 817, 844
BccI CCATC 3 cut(s) 140, 577, 1047
BceAI ACGGC 1 cut(s) 2348
BciT130I CCWGG 2 cut(s) 515, 1286
BclI TGATCA 3 cut(s) 397, 1381, 1810
BfaI CTAG 6 cut(s) 438, 456, 678, 725, 816, 1311
BfmI CTRYAG 2 cut(s) 803, 2055
BfrI CTTAAG 1 cut(s) 1162
BfuAI ACCTGC 1 cut(s) 2394
BisI GCNGC 6 cut(s) 213, 320, 323, 453, 806, 858
BlsI GCNGC 6 cut(s) 214, 321, 324, 454, 807, 859
BmcAI AGTACT 1 cut(s) 1753
Bme1390I CCNGG 2 cut(s) 515, 1286
Bme18I GGWCC 1 cut(s) 1399
BmgBI CACGTC 1 cut(s) 1106
BmgT120I GGNCC 1 cut(s) 1399
BmiI GGNNCC 4 cut(s) 639, 1290, 1542, 1671
BmrFI CCNGG 2 cut(s) 515, 1286
BmrI ACTGGG 1 cut(s) 1047
BmsI GCATC 8 cut(s) 577, 837, 954, 1135, 1568, 2048, 2274, 2370
BmuI ACTGGG 1 cut(s) 1047
BpiI GAAGAC 1 cut(s) 1481
BplI GAGNNNNNCTC 2 cut(s) 1340, 1372
BpmI CTGGAG 1 cut(s) 1278
Bpu10I CCTNAGC 1 cut(s) 2127
BpuEI CTTGAG 2 cut(s) 2056, 2295
BsaAI YACGTR 3 cut(s) 407, 770, 1511
BsaBI GATNNNNATC 2 cut(s) 591, 1380
BsaHI GRCGYC 1 cut(s) 1300
BsaJI CCNNGG 2 cut(s) 986, 1570
BsaXI ACNNNNNCTCC 4 cut(s) 1721, 1751, 1931, 1961
Bsc4I CCNNNNNNNGG 1 cut(s) 1936
Bse1I ACTGG 5 cut(s) 932, 998, 1042, 1261, 1783
Bse8I GATNNNNATC 2 cut(s) 591, 1380
BseBI CCWGG 2 cut(s) 515, 1286
BseDI CCNNGG 2 cut(s) 986, 1570
BseGI GGATG 5 cut(s) 592, 908, 969, 1559, 2385
BseJI GATNNNNATC 2 cut(s) 591, 1380
BseLI CCNNNNNNNGG 1 cut(s) 1936
BseMII CTCAG 5 cut(s) 908, 1017, 1284, 1470, 2118
BseNI ACTGG 5 cut(s) 932, 998, 1042, 1261, 1783
BseRI GAGGAG 2 cut(s) 479, 2313
BseSI GKGCMC 1 cut(s) 1543
BseXI GCAGC 6 cut(s) 224, 306, 309, 439, 817, 844
BshFI GGCC 2 cut(s) 542, 2232
BshNI GGYRCC 2 cut(s) 1288, 1540
BsiHKAI GWGCWC 2 cut(s) 303, 437
BslFI GGGAC 1 cut(s) 1890
BslI CCNNNNNNNGG 1 cut(s) 1936
BsmFI GGGAC 1 cut(s) 1890
BsmI GAATGC 2 cut(s) 1225, 1711
BsnI GGCC 2 cut(s) 542, 2232
Bsp1286I GDGCHC 3 cut(s) 303, 437, 1543
Bsp1407I TGTACA 2 cut(s) 627, 1621
Bsp19I CCATGG 1 cut(s) 986
BspACI CCGC 5 cut(s) 37, 186, 286, 505, 1990
BspANI GGCC 2 cut(s) 542, 2232
BspCNI CTCAG 5 cut(s) 909, 1018, 1285, 1471, 2119
BspHI TCATGA 1 cut(s) 2292
BspLI GGNNCC 4 cut(s) 639, 1290, 1542, 1671
BspMAI CTGCAG 1 cut(s) 807
BspMI ACCTGC 1 cut(s) 2394
BspPI GGATC 4 cut(s) 194, 480, 1338, 2300
BspQI GCTCTTC 1 cut(s) 425
BspT107I GGYRCC 2 cut(s) 1288, 1540
BspTI CTTAAG 1 cut(s) 1162
BsrGI TGTACA 2 cut(s) 627, 1621
BsrI ACTGG 5 cut(s) 932, 998, 1042, 1261, 1783
BssECI CCNNGG 2 cut(s) 986, 1570
BssNI GRCGYC 1 cut(s) 1300
BssT1I CCWWGG 2 cut(s) 986, 1570
Bst2UI CCWGG 2 cut(s) 515, 1286
Bst4CI ACNGT 7 cut(s) 627, 642, 906, 1114, 1761, 1947, 2196
Bst6I CTCTTC 2 cut(s) 425, 1498
BstACI GRCGYC 1 cut(s) 1300
BstAFI CTTAAG 1 cut(s) 1162
BstAPI GCANNNNNTGC 2 cut(s) 1220, 1883
BstAUI TGTACA 2 cut(s) 627, 1621
BstBAI YACGTR 3 cut(s) 407, 770, 1511
BstC8I GCNNGC 8 cut(s) 41, 501, 505, 758, 1212, 1345, 1980, 2155
BstDEI CTNAG 6 cut(s) 93, 917, 1026, 1293, 1479, 2127
BstDSI CCRYGG 1 cut(s) 986
BstF5I GGATG 5 cut(s) 592, 908, 969, 1559, 2385
BstMWI GCNNNNNNNGC 3 cut(s) 1220, 1883, 2389
BstNI CCWGG 2 cut(s) 515, 1286
BstNSI RCATGY 3 cut(s) 111, 307, 1628
BstSCI CCNGG 2 cut(s) 513, 1284
BstSFI CTRYAG 2 cut(s) 803, 2055
BstSLI GKGCMC 1 cut(s) 1543
BstV1I GCAGC 6 cut(s) 224, 306, 309, 439, 817, 844
BstV2I GAAGAC 1 cut(s) 1481
BstX2I RGATCY 2 cut(s) 485, 2305
BstXI CCANNNNNNTGG 2 cut(s) 993, 1073
BstYI RGATCY 2 cut(s) 485, 2305
BsuRI GGCC 2 cut(s) 542, 2232
BtgI CCRYGG 1 cut(s) 986
BtgZI GCGATG 2 cut(s) 1592, 2107
BtrI CACGTC 1 cut(s) 1106
BtsCI GGATG 5 cut(s) 592, 908, 969, 1559, 2385
BtsIMutI CAGTG 5 cut(s) 1035, 1110, 1643, 1757, 2316
BveI ACCTGC 1 cut(s) 2394
Cac8I GCNNGC 8 cut(s) 41, 501, 505, 758, 1212, 1345, 1980, 2155
CciI TCATGA 1 cut(s) 2292
Cfr13I GGNCC 1 cut(s) 1399
CseI GACGC 2 cut(s) 1289, 1948
Csp6I GTAC 7 cut(s) 118, 628, 730, 940, 1508, 1622, 1752
CspCI CAANNNNNGTGG 2 cut(s) 1931, 1966
CviQI GTAC 7 cut(s) 118, 628, 730, 940, 1508, 1622, 1752
DdeI CTNAG 6 cut(s) 93, 917, 1026, 1293, 1479, 2127
DraIII CACNNNGTG 1 cut(s) 1936
DrdI GACNNNNNNGTC 1 cut(s) 1917
DseDI GACNNNNNNGTC 1 cut(s) 1917
Eam1104I CTCTTC 2 cut(s) 425, 1498
EarI CTCTTC 2 cut(s) 425, 1498
EciI GGCGGA 2 cut(s) 26, 201
Eco130I CCWWGG 2 cut(s) 986, 1570
Eco32I GATATC 1 cut(s) 893
Eco47I GGWCC 1 cut(s) 1399
Eco57I CTGAAG 1 cut(s) 1159
Eco72I CACGTG 1 cut(s) 407
EcoRII CCWGG 2 cut(s) 513, 1284
EcoRV GATATC 1 cut(s) 893
EcoT14I CCWWGG 2 cut(s) 986, 1570
ErhI CCWWGG 2 cut(s) 986, 1570
FaqI GGGAC 1 cut(s) 1890
FauI CCCGC 1 cut(s) 512
FbaI TGATCA 3 cut(s) 397, 1381, 1810
Fnu4HI GCNGC 6 cut(s) 213, 320, 323, 453, 806, 858
FokI GGATG 5 cut(s) 599, 895, 976, 1546, 2392
Fsp4HI GCNGC 6 cut(s) 213, 320, 323, 453, 806, 858
FspBI CTAG 6 cut(s) 438, 456, 678, 725, 816, 1311
GluI GCNGC 6 cut(s) 213, 320, 323, 453, 806, 858
GsuI CTGGAG 1 cut(s) 1278
HaeIII GGCC 2 cut(s) 542, 2232
HgaI GACGC 2 cut(s) 1289, 1948
Hin1I GRCGYC 1 cut(s) 1300
HincII GTYRAC 3 cut(s) 340, 1117, 1308
HindII GTYRAC 3 cut(s) 340, 1117, 1308
HindIII AAGCTT 3 cut(s) 138, 2002, 2345
HinfI GANTC 8 cut(s) 23, 240, 871, 1048, 1413, 1866, 2266, 2357
HphI GGTGA 5 cut(s) 592, 935, 1179, 1398, 1834
Hpy166II GTNNAC 7 cut(s) 120, 340, 630, 1117, 1308, 1622, 1987
Hpy188I TCNGA 9 cut(s) 532, 918, 1027, 1386, 1765, 1795, 1923, 2221, 2356
Hpy188III TCNNGA 5 cut(s) 563, 950, 1177, 1397, 2293
Hpy8I GTNNAC 7 cut(s) 120, 340, 630, 1117, 1308, 1622, 1987
HpyAV CCTTC 8 cut(s) 56, 119, 930, 1200, 1683, 1752, 2076, 2321
HpyCH4III ACNGT 7 cut(s) 627, 642, 906, 1114, 1761, 1947, 2196
HpyCH4IV ACGT 4 cut(s) 406, 769, 1105, 1510
HpyF10VI GCNNNNNNNGC 3 cut(s) 1220, 1883, 2389
HpyF3I CTNAG 6 cut(s) 93, 917, 1026, 1293, 1479, 2127
HpySE526I ACGT 4 cut(s) 406, 769, 1105, 1510
Hsp92I GRCGYC 1 cut(s) 1300
Ksp22I TGATCA 3 cut(s) 397, 1381, 1810
LguI GCTCTTC 1 cut(s) 425
LmnI GCTCC 3 cut(s) 65, 1939, 2300
Lsp1109I GCAGC 6 cut(s) 224, 306, 309, 439, 817, 844
LweI GCATC 8 cut(s) 577, 837, 954, 1135, 1568, 2048, 2274, 2370
MaeI CTAG 6 cut(s) 438, 456, 678, 725, 816, 1311
MaeII ACGT 4 cut(s) 406, 769, 1105, 1510
MaeIII GTNAC 6 cut(s) 288, 599, 923, 1106, 1822, 2045
MfeI CAATTG 3 cut(s) 246, 1488, 1806
MflI RGATCY 2 cut(s) 485, 2305
MhlI GDGCHC 3 cut(s) 303, 437, 1543
MlyI GAGTC 1 cut(s) 1057
MroXI GAANNNNTTC 1 cut(s) 88
MseI TTAA 4 cut(s) 1163, 1565, 1682, 2019
MslI CAYNNNNRTG 3 cut(s) 440, 1071, 2250
MspCI CTTAAG 1 cut(s) 1162
MspR9I CCNGG 2 cut(s) 515, 1286
MunI CAATTG 3 cut(s) 246, 1488, 1806
Mva1269I GAATGC 2 cut(s) 1225, 1711
MvaI CCWGG 2 cut(s) 515, 1286
MwoI GCNNNNNNNGC 3 cut(s) 1220, 1883, 2389
NcoI CCATGG 1 cut(s) 986
NlaIV GGNNCC 4 cut(s) 639, 1290, 1542, 1671
NmeAIII GCCGAG 1 cut(s) 1491
NmuCI GTSAC 5 cut(s) 288, 923, 1106, 1822, 2045
NspI RCATGY 3 cut(s) 111, 307, 1628
PagI TCATGA 1 cut(s) 2292
PaqCI CACCTGC 1 cut(s) 2394
PciI ACATGT 1 cut(s) 1624
PciSI GCTCTTC 1 cut(s) 425
PcsI WCGNNNNNNNCGW 1 cut(s) 15
PctI GAATGC 2 cut(s) 1225, 1711
PdmI GAANNNNTTC 1 cut(s) 88
PfeI GAWTC 7 cut(s) 23, 240, 871, 1413, 1866, 2266, 2357
PflMI CCANNNNNTGG 1 cut(s) 1936
PkrI GCNGC 6 cut(s) 214, 321, 324, 454, 807, 859
PleI GAGTC 1 cut(s) 1056
PmaCI CACGTG 1 cut(s) 407
PmlI CACGTG 1 cut(s) 407
PpsI GAGTC 1 cut(s) 1056
Ppu21I YACGTR 3 cut(s) 407, 770, 1511
PscI ACATGT 1 cut(s) 1624
PshBI ATTAAT 1 cut(s) 2019
PsiI TTATAA 1 cut(s) 1461
Psp6I CCWGG 2 cut(s) 513, 1284
PspCI CACGTG 1 cut(s) 407
PspGI CCWGG 2 cut(s) 513, 1284
PspN4I GGNNCC 4 cut(s) 639, 1290, 1542, 1671
PspPI GGNCC 1 cut(s) 1399
PstI CTGCAG 1 cut(s) 807
PsuI RGATCY 2 cut(s) 485, 2305
RsaI GTAC 7 cut(s) 119, 629, 731, 941, 1509, 1623, 1753
RsaNI GTAC 7 cut(s) 118, 628, 730, 940, 1508, 1622, 1752
RseI CAYNNNNRTG 3 cut(s) 440, 1071, 2250
SapI GCTCTTC 1 cut(s) 425
SaqAI TTAA 4 cut(s) 1163, 1565, 1682, 2019
SatI GCNGC 6 cut(s) 213, 320, 323, 453, 806, 858
Sau96I GGNCC 1 cut(s) 1399
ScaI AGTACT 1 cut(s) 1753
SchI GAGTC 1 cut(s) 1057
ScrFI CCNGG 2 cut(s) 515, 1286
SduI GDGCHC 3 cut(s) 303, 437, 1543
SfaNI GCATC 8 cut(s) 577, 837, 954, 1135, 1568, 2048, 2274, 2370
SfcI CTRYAG 2 cut(s) 803, 2055
SinI GGWCC 1 cut(s) 1399
SmiMI CAYNNNNRTG 3 cut(s) 440, 1071, 2250
SmlI CTYRAG 3 cut(s) 1162, 2071, 2310
SmoI CTYRAG 3 cut(s) 1162, 2071, 2310
SsiI CCGC 5 cut(s) 37, 186, 286, 505, 1990
SspMI CTAG 6 cut(s) 438, 456, 678, 725, 816, 1311
StyD4I CCNGG 2 cut(s) 513, 1284
StyI CCWWGG 2 cut(s) 986, 1570
TaaI ACNGT 7 cut(s) 627, 642, 906, 1114, 1761, 1947, 2196
TaiI ACGT 4 cut(s) 409, 772, 1108, 1513
TaqI TCGA 7 cut(s) 18, 112, 958, 979, 1051, 1130, 1721
TatI WGTACW 5 cut(s) 117, 627, 729, 1621, 1751
TfiI GAWTC 7 cut(s) 23, 240, 871, 1413, 1866, 2266, 2357
Tru1I TTAA 4 cut(s) 1163, 1565, 1682, 2019
Tru9I TTAA 4 cut(s) 1163, 1565, 1682, 2019
TscAI CASTG 5 cut(s) 1042, 1117, 1650, 1764, 2323
TseFI GTSAC 5 cut(s) 288, 923, 1106, 1822, 2045
TseI GCWGC 6 cut(s) 212, 319, 322, 452, 805, 857
Tsp45I GTSAC 5 cut(s) 288, 923, 1106, 1822, 2045
TspDTI ATGAA 7 cut(s) 638, 729, 934, 1104, 1260, 1595, 1858
TspGWI ACGGA 1 cut(s) 1087
TspRI CASTG 5 cut(s) 1042, 1117, 1650, 1764, 2323
Van91I CCANNNNNTGG 1 cut(s) 1936
Vha464I CTTAAG 1 cut(s) 1162
VpaK11BI GGWCC 1 cut(s) 1399
VspI ATTAAT 1 cut(s) 2019
XapI RAATTY 2 cut(s) 1801, 2083
XceI RCATGY 3 cut(s) 111, 307, 1628
XcmI CCANNNNNNNNNTGG 2 cut(s) 47, 1073
XmnI GAANNNNTTC 1 cut(s) 88
XspI CTAG 6 cut(s) 438, 456, 678, 725, 816, 1311
ZrmI AGTACT 1 cut(s) 1753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.